Helminth Eggs Detected in Soil Samples of a Possible Toilet Structure Found at the Capital Area of Ancient Baekje Kingdom of Korea

Although research conducted in East Asia has uncovered parasite eggs from ancient toilets or cesspits, data accumulated to date needs to be supplemented by more archaeoparasitological studies. We examined a total of 21 soil samples from a toilet-like structure at the Hwajisan site, a Baekje-period royal villa, in present-day Korea. At least 4 species of helminth eggs, i.e., Trichuris trichiura, Ascaris lumbricoides, Clonorchis sinensis, and Trichuris sp. (or Trichuris vulpis) were detected in 3 sediment samples of the structure that was likely a toilet used by Baekje nobles. The eggs of T. trichiura were found in all 3 samples (no. 1, 4, and 5); and A. lumbricoides eggs were detected in 2 samples (no. 4 and 5). C. sinensis and T. vulpis-like eggs were found in no. 5 sample. From the findings of this study, we can suppose that the soil-transmitted helminths were prevalent in ancient Korean people, including the nobles of Baekje Kingdom during the 5th to 7th century.     

藏羚寄生蠕虫卵粪检调查初报

2004年12月25日~2005年1月5日对位于青藏公路楚玛尔河大桥附近集群的藏羚(Pantholopshodgsoni),随机拣取其新鲜粪便共计36份带回实验室。利用漂浮法、沉淀法对粪样进行寄生虫蠕虫卵检查,结果显示,粪样中存在有细颈属(Nematodirus)、马歇尔属(Marshallagia)线虫卵和莫尼茨属(Moniezia)绦虫卵,其感染率在19.4%~94.4%之间,感染强度(EPG)分别为5.58、5.11和2.86。结果表明,冬季藏羚的寄生蠕虫感染率高,但感染种类少和感染强度低。     

Extraction of Cysts and Eggs of Heterodera schachtii from Soil with an Assessment of Extraction Efficiency

Techniques are described for the extraction and enumeration of cysts and contained eggs from soil samples. The average recovery of cysts from seeded soil samples of differing soil texture was 82.7 ± 2.1%. Recovery from sandy clay soil samples seeded at 1 cyst/100 g soil was 63.4 ± 5.5%; at 4.2 cysts/100 g soil recovery was 89.6 ± 1.8%. Recovery of cysts from naturally infested clay soil was 88.3 ± 2.05%. Egg extraction efficiency for seeded samples was calculated as 78%, and for naturally infested soil was estimated as 83%.     

Soil seed bank of the waste landfills in South Korea

The restoration of urban landfill is a topic of growing interest in reclamation ecology as the acreage of abandoned sites near cities increases. The goals of this study were to assess the ecological status of waste landfills and to elucidate the role of seed banks in the establishment of vegetation at these sites. The study sites were located at five landfills around Seoul and Kyongki Province. On average, soils were sampled on 20 plots per landfill in 2001 to record species composition and to estimate the number of seeds in the soil. Soil seed bank vegetation and the individual number of seedlings that germinated were recorded using the seedling emergence method. Relative density per species was calculated from the number of individual seedlings. We conducted canonical correspondence analysis (CCA) using the program CANOCO to survey the relationships between 23 environmental variables and plant importance values. Environmental variables included categorical and numerical variables (landfill age, landfill size, distance from landfill edge, human disturbance level, slope, periodic management level) and soil physico-chemical variables (bulk density, soil moisture content, organic matter content, total N, available P, K, Na, Ca, Mg, Cd, Cr, Cu, Fe, Mn, Ni, Pb, and Zn). The mean seedling density per m ² differed significantly among sites (P < 0.05). As landfill age increased, the mean seedling density per m ² decreased. The mean seedling density of the Sangpaedong landfill, which was less than 1 year old, was higher than that found in 6- and 7-year-old landfills. The Sangpaedong landfill mainly contained seeds of Chenopodium albumL. and Digitaria ciliaris(L.) SCOP. With regard to early vegetative colonization in landfills, our results highlighted the importance of seed banks occurring in cover soils. Cover soils, derived from various sources, will determine landfill landscapes because of different seed banks present in them. The first axis of the CCA was correlated with landfill age, Na, and human disturbance level, while the second axis was correlated with landfill size, slope, periodic management level, Zn, total N, and organic matter content. Understanding seed banks in landfill cover soils is important, therefore, for proper landfill management and restoration.     

Detection of Helminth Eggs and Identification of Hookworm Species in Stray Cats,Dogs and Soil from Klang Valley,Malaysia

The present study was conducted to determine the prevalence of helminth eggs excreted in the faeces of stray cats, dogs and in soil samples. A total of 505 fresh samples of faeces (from 227 dogs and 152 cats) and soil were collected. The egg stage was detected via microscopy after the application of formalin–ether concentration technique. Genomic DNA was extracted from the samples containing hookworm eggs and used for further identification to the species level using real-time polymerase chain reaction coupled with high resolution melting analysis. Microscopic observation showed that the overall prevalence of helminth eggs among stray cats and dogs was 75.7% (95% CI = 71.2%–79.9%), in which 87.7% of dogs and 57.9% of cats were infected with at least one parasite genus. Five genera of heliminth eggs were detected in the faecal samples, including hookworms (46.4%), Toxocara (11.1%), Trichuris (8.4%), Spirometra (7.4%) and Ascaris (2.4%). The prevalence of helminth infections among stray dogs was significantly higher than that among stray cats (p < 0.001). Only three genera of helminths were detected in soil samples with the prevalence of 23% (95% CI = 15.1%–31%), consisting of hookworms (16.6%), Ascaris (4%) and Toxocara (2.4%). The molecular identification of hookworm species revealed that Ancylostoma ceylanicum was dominant in both faecal and soil samples. The dog hookworm, Ancylostoma caninum, was also detected among cats, which is the first such occurrence reported in Malaysia till date. This finding indicated that there was a cross-infection of A. caninum between stray cats and dogs because of their coexistent within human communities. Taken together, these data suggest the potential role of stray cats and dogs as being the main sources of environmental contamination as well as for human infections.     

DNA水凝胶应用于环境样品快速检测的研究进展

DNA作为生物大分子既可以引导生物发育和生命机能活动,也可以被用作构筑纳米生物材料.DNA水凝胶可以制备成兼具DNA生物功能和水凝胶特质,应用于环境样品的分析检测.依据制备DNA水凝胶长链的方法,对比分析了聚合酶链反应、杂交链式反应、滚环扩增技术的制备,物理水凝胶和化学水凝胶的合成过程和改性方法技术特点;并结合环境样品...     

Detection and Molecular Characterization of Cryptosporidium spp. from Wild Rodents and Insectivores in South Korea

In order to examine the prevalence of Cryptosporidium infection in wild rodents and insectivores of South Korea and to assess their potential role as a source of human cryptosporidiosis, a total of 199 wild rodents and insectivore specimens were collected from 10 regions of South Korea and screened for Cryptosporidium infection over a period of 2 years (2012-2013). A nested-PCR amplification of Cryptosporidium oocyst wall protein (COWP) gene fragment revealed an overall prevalence of 34.2% (68/199). The sequence analysis of 18S rRNA gene locus of Cryptosporidium was performed from the fecal and cecum samples that tested positive by COWP amplification PCR. As a result, we identified 4 species/genotypes; chipmunk genotype I, cervine genotype I, C. muris, and a new genotype which is closely related to the bear genotype. The new genotype isolated from 12 Apodemus agrarius and 2 Apodemus chejuensis was not previously identified as known species or genotype, and therefore, it is supposed to be a novel genotype. In addition, the host spectrum of Cryptosporidium was extended to A. agrarius and Crosidura lasiura, which had not been reported before. In this study, we found that the Korean wild rodents and insectivores were infected with various Cryptosporidium spp. with large intra-genotypic variationa, indicating that they may function as potential reservoirs transmitting zoonotic Cryptosporidium to livestock and humans.     

Evaluation of Molecular Methods To Improve the Detection of Burkholderia pseudomallei in Soil and Water Samples from Laos

Burkholderia pseudomallei is the cause of melioidosis, a severe and potentially fatal disease of humans and animals. It is endemic in northern Australia and Southeast Asia and is found in soil and surface water. The environmental distribution of B. pseudomallei worldwide and within countries where it is endemic, such as the Lao People''s Democratic Republic (Laos), remains unclear. However, this knowledge is important to our understanding of the ecology and epidemiology of B. pseudomallei and to facilitate public health interventions. Sensitive and specific methods to detect B. pseudomallei in environmental samples are therefore needed. The aim of this study was to compare molecular and culture-based methods for the detection of B. pseudomallei in soil and surface water in order to identify the optimal approach for future environmental studies in Laos. Molecular detection by quantitative real-time PCR (qPCR) was attempted after DNA extraction directly from soil or water samples or after an overnight enrichment step. The positivity rates obtained by qPCR were compared to those obtained by different culture techniques. The rate of detection from soil samples by qPCR following culture enrichment was significantly higher (84/100) than that by individual culture methods and all culture methods combined (44/100; P < 0.001). Similarly, qPCR following enrichment was the most sensitive method for filtered river water compared with the sensitivity of the individual methods and all individual methods combined. In conclusion, molecular detection following an enrichment step has proven to be a sensitive and reliable approach for B. pseudomallei detection in Lao environmental samples and is recommended as the preferred method for future surveys.     

Seasonal prevalence of mosquitoes collected from light traps in the Republic of Korea, 2005

Adult mosquito surveillance was conducted during 2005 at 22 US military installations and two training sites located in six provinces in the Republic of Korea. Adult mosquitoes were collected in New Jersey light traps from 1 May to 15 October to determine threshold levels to initiate pesticide applications based on trap indices. A total of 27 363 adult mosquitoes (22 368 [81.7%] females and 4995 [18.3%] males) comprising 15 species (including five members of the Anopheles sinensis group) belonging to seven genera were collected. The most common species collected were members of the Anopheles sinensis Wiedemann group (50.2%), followed by Culex tritaeniorhynchus Giles (30.6%), Aedes vexans nipponii (Theobald) (11.8%), and Culex pipiens Coquillett (6.3%) females. Trap indices varied widely for species over their range, due in part to geographical distribution and degree of association with urban or rural communities.     

On the Methodology of Nematode Extraction from Field Samples: Comparison of Methods for Soil Extraction

The commonly used nematode extraction methods were compared using three soil types and four nematode species. The comparison was repeated in three trials by the same operator to estimate operator reproducibility. Extraction efficiency was dependent upon method, soil type, and nematode species, and reproducibility was not particularly satisfactory for routine analyses. Extraction by any method tested was less than 50% efficient. Quantitative nematode extraction methodology needs serious attention.     

Investigation of Metal levels in Artemisia herba-alba Medicinal Plant and Soil Samples Collected from Different Areas in Jordan Country

ABSTRACT

The concentrations of selected heavy metals including cadmium (Cd), lead (Pb), zinc (Zn), copper (Cu), nickel (Ni) and iron (Fe) in stems and leaves of Artemisia herba-alba medicinal plant and soil samples were evaluated. Results showed that there in heavy metal concentrations of washed and unwashed parts of A. herba-alba from northern site (Irbid), Middle site (Al-Mafraq), and Souhern site (Ma’an) (P < .05). Moreover, the results of this study revealed that there is a correlation between heavy metal levels in medicinal plants and their concentrations in soil. Two standard reference materials of plant (SRM 1790a; spinach, CRM 281; ryegrass) and a standard reference material of soil (GBW 07406) were examined to validate the method used. There were good agreements between the measured values of these standard reference materials and their certified values. In addition to that high recoveries for tested elements were ranged between 91.7–97.7%, 90–96.6%, and 92.2–97.7% in (CRM281, ryegrass), (SRM1570a, spinach) and (GBW 04706, soil) respectively. It is reasonable to conclude that the variation in metal concentration from site to another site as well as from element to another element may be due to the different factors such as traf?c volumes, the wind directions, the soil nature, and the element behavior.

Based on the results obtained, the health authorities will take in consideration these useful information and direct the residents about the risk of these pollutants.     

Seasonal prevalence of mosquitoes collected from light traps in the Republic of Korea, 2007

Adult mosquito surveillance was conducted using New Jersey light traps from 1 May to 15 October during 2007 at 14 US Army and three Air Force installations and two US Army training sites located in six provinces in the Republic of Korea to determine threshold levels to initiate pesticide applications based on trap indices. A total of 24 013 adult mosquitoes (19 763 [82.3%] females and 4250 [17.1%] males) comprising 16 species (including five members of the Anopheles Hyrcanus Group) and belonging to seven genera were collected. Females of the most commonly collected species were members of the Anopheles Hyrcanus Group (52.1%), followed by, Culex tritaeniorhynchus Giles (20.6%), Culex pipiens Coquillett (13.8%), and Aedes vexans nipponii (Theobald) (11.6%). Trap indices varied widely for species over their range, due in part, to geographical distribution and degree of association with urban or rural communities.     

X-ray Fluorescence (XRF) Analysis of Soil Heavy Metal Pollution from an Industrial Area in Kumasi,Ghana

Knowledge of soil heavy metal concentration is very important for assessing the purity and quality of the soil in an environment. The concentrations of nine heavy metals (NHM), Zn, Pb, Cr, Cu, Co, Ni, Cd, Hg, and As, from the near-surface soils (～ 0–15 cm) from an industrial cluster in Kumasi, Ghana, were qualitatively and quantitatively measured and analyzed using X-ray fluorescence (XRF) spectroscopy analysis. The sources of these NHM were mainly anthropogenic as a result of the indiscriminate industrial waste disposal. In all, a total of about 100 soil samples were taken from six sampling sites, four of which were industrial and the remaining two residential. Forty soil samples out of the total number were carefully selected for elemental analyses and the mean heavy metal concentrations were calculated using statistical methods. The results from locations of high industrial impact showed that the mean concentrations of the NHM present in the soil were in the order of Zn (189.2?908.6 mgkg^?1), Pb (133.7?571.3 mgkg^?1), Cr (91.3?545.8 mgkg^?1), Cu (62.9?334.6 mgkg^?1), Co (38.6?81.9 mgkg^?1), Ni (12.4?30.9 mgkg^?1), Cd (6.9?13.2 mgkg^?1), Hg (5.5?10.4 mg kg^?1), and As (2.3?18.6 mgkg^?1). Apart from Ni and As, all the heavy metals recorded concentrations that ranged from 10?900% higher than their respective threshold limit values (TLVs). Heavy metal concentrations from the residential sites were comparatively far lower with only Cr, Cd, and Hg registering concentrations between 65?250% above their TLVs. The cluster with its residential communities is at a serious risk of soil heavy metal toxicity and awareness to this needs to be created as such.     

广西二叠纪深海硅质岩系中瓜德鲁普统至乐平统界线地层牙形石分带及动物群特征

在广西钦州地区小董镇大虫岭深海硅质岩剖面中,首次处理出了层序连续的牙形石化石,并由老至新划分了二个牙形石带,即Jinogondolella granti带和Clarkina dukouensis带。通过这二个牙形石带与斜坡相和盆地相碳酸盐岩硅质岩系中的牙形石带进行对比,划分了本剖面中乐平统生物地层底界。本文对深海硅质岩系中这一界线地层牙形石动物群特征进行了简要的描述。     

Determinants of well-being in North Korea: Evidence from the post-famine period

North Korea has survived the breakdown of the communist bloc and has been immune to the democratization process of the 1990s. In spite of national famines and economic collapse, the totalitarian regime in Pyongyang maintains a firm grip on its power. Reliable information on the population's biosocial welfare is scarce. Using height and weight data of 5991 North Korean pre-school children measured in 2002, we investigate determinants of height-for-age z-score (HAZ), weight-for-age z-score (WAZ) and weight-for-height z-score (WHZ) as an indicator for child health. We find a statistically significant impact of the age of the child and of the mother, as well as the sex of the child on HAZ and WAZ. In contrast, social status and wealth proxies at the individual and household level are not statistically significant possibly because of errors in these variables. We do not find a consistent effect for geographic regions or for rural-urban residents either. Yet, urban provinces seem to be better-off. Most importantly, we find that children living in families who benefit from food aid of the United Nations are healthier in terms of HAZ, WAZ and WHZ than those depending on the government. Hence, further delivery of United Nations food aid is likely to mitigate the effects of the ongoing food crisis in North Korea.     

Seasonal prevalence of mosquitoes collected from light traps with notes on malaria in the Republic of Korea, 2004

Adult mosquito surveillance was conducted during 2004 at 29 US military installations and training sites located in six provinces in the Republic of Korea. Adult mosquitoes were collected in New Jersey light traps and Magnet traps from 1 May through 15 October to determine threshold levels to initiate pesticide applications and to identify malaria infection rates at selected army installations and training sites. A total of 89 206 adults (78 454 [87.9%] females and 10 752 [12.1%] males) comprising 20 species (including five members of the Anopheles Hyrcanus Group) and belonging to seven genera were collected. The most common species collected were members of Culex tritaeniorhynchus Giles (49.4%) and Anopheles sinensis Wiedemann complex (39.1%), followed by Culex pipiens Coquillett (6.1%) and Aedes vexans nipponii (Theobald) (4.2%). Trap indices varied widely for species over their range, due in part to geographical distribution and degree of association with urban communities.     

Production and Evaluation of Monoclonal Antibodies for the Detection of Pythium sulcatum in Soil

Monoclonal antibodies (MAbs) were raised against surface antigens from Pythium sulcatum. The immunogens were prepared from salt extractable cell wall protein to produce monoclonal antibodies. The MAbs showed high specificity to seven P. sulcatum isolates among 26 species of soil‐borne fungi. Weak cross‐reactivities were observed with Pythium aristosporum, Pythium myriotylum, and Pythium zingiberum in indirect enzyme‐linked immunosorbent assay (ELISA), but no reaction was obtained in Western blot analysis. The MAbs recognized glycoproteins in cell wall. Pythium sulcatum was detected in naturally infected carrot tissues and soil using indirect competition ELISA.     

Seasonal prevalence of mosquitoes collected from light traps in the Republic of Korea, 2006

Adult mosquito surveillance was conducted during 2006 at 22 US Army and Air Force installations and two training sites located in six provinces in the Republic of Korea. Adult mosquitoes were collected in New Jersey light traps from 1 May through 15 October 2006 to determine threshold levels to initiate pesticide applications based on trap indices. In total 16 217 adult mosquitoes [13 612 (83.9%) females and 2605 (16.1%) males] comprising 16 species (including five members of the Anopheles sinensis Group) belonging to eight genera were collected. Females of the most commonly collected species were members of the Anopheles sinensis Wiedemann Group (58.9%), followed by Aedes vexans nipponii (Theobald) (21.3%), Culex tritaeniorhynchus Giles (11.8%) and Culex pipiens Coquillett (5.2%). Trap indices varied widely for species over their range, due in part, to their geographical distribution and degree of association with urban or rural communities.     

Surface Plasmon Resonance Biosensor for Detection of Bacillus anthracis, the Causative Agent of Anthrax from Soil Samples Targeting Protective Antigen

Bacillus anthracis, the causative agent of anthrax is one of the most important biological warfare agents. In this study, surface plasmon resonance (SPR) technology was used for indirect detection of B. anthracis by detecting protective antigen (PA), a common toxin produced by all live B. anthracis bacteria. For development of biosensor, a monoclonal antibody raised against B. anthracis PA was immobilized on carboxymethyldextran modified gold chip and its interaction with PA was characterized in situ by SPR and electrochemical impedance spectroscopy. By using kinetic evaluation software, K_D (equilibrium constant) and B_max (maximum binding capacity of analyte) were found to be 20 fM and 18.74, respectively. The change in Gibb’s free energy (∆G = −78.04 kJ/mol) confirmed the spontaneous interaction between antigen and antibody. The assay could detect 12 fM purified PA. When anthrax spores spiked soil samples were enriched, PA produced in the sample containing even a single spore of B. anthracis could be detected by SPR. PA being produced only by the vegetative cells of B. anthracis, confirms indirectly the presence of B. anthracis in the samples. The proposed method can be a very useful tool for screening and confirmation of anthrax suspected environmental samples during a bio-warfare like situation.     

应用多重PCR方法检测石蜡包埋组织标本中的分枝杆菌DNA

应用多重PCR方法检测并鉴别石蜡包埋组织中的结核分枝杆菌复合体与非结核分枝杆菌DNA扩增片段类型 ,为结核分枝杆菌复合体感染与非结核分枝杆菌感染的病理学诊断提供一种补充的鉴别诊断方法。应用三对具有特异性的寡核苷酸引物 ,进行多重PCR扩增。这三对引物分别对应于分枝杆菌 6 5kD表面抗原、结核分枝杆菌插入序列IS6 1 1 0及人类β 珠蛋白基因的部分序列 ,其扩增产物分别为 3 83bp、1 2 3bp和 2 6 8bp。此种多重PCR方法检测的灵敏度为 0 6pg。经多重PCR扩增后进行凝胶电泳 ,结核分枝杆菌复合体 (结核分枝杆菌、牛型结核分枝杆菌、BCG)均可见 3 83bp、1 2 3bp片段 ,而非结核分枝杆菌 (鸟、龟、瘰疬、蟾蜍、堪萨斯、胞内、耻垢分枝杆菌 )仅见 3 83bp片段 (猿猴分枝杆菌与结核分枝杆菌复合体相同 )。与上述相比 ,分枝杆菌感染的临床标本分别增加了一条 2 6 8bp片段。对 2 0 9例临床初步诊断为淋巴结结核病人的石蜡包埋组织标本进行了多重PCR检测 ,1 93例病理诊断为淋巴结结核、结核性肉芽组织、结核性肉芽肿性炎症病人的标本 ,检测结果符合结核分枝杆菌复合体感…