A classification of European skulls from three time periods

We analyze the taxonomic structure of European populations at three time periods, the Early Middle Ages, the Late Middle Ages and the Recent Period. The data consist of sample means for 10 cranial variables based on 137, 108, and 183 samples for the three periods. Clustering by standard numerical taxonomic procedures reveals that the data are represented only poorly as hierarchic classifications. The clusters form significant and moderately strong associations with an arrangement of the samples by regions (geography) and by language family. Whereas during the early period, language family showed a stronger association with clusters based on cranial morphology, in the recent populations these clusters correspond better with geography than with language. Ordinations of these populations by means of nonmetric multidimensional scaling shows the continuity of the taxonomic structure at all three periods. Only a few populations are outliers. The relations between phenetic distances (cranial morphology), geography, and language are examined by means of multiple Mantel tests. At all three periods geography is correlated somewhat more strongly with phenetics than is language affiliation, but the correlation with the latter increases with time. When the data are pooled over the three periods, the populations tend to group by language affiliation more than they do by period. Ordination of the pooled data reveals language patterns rather than patterns due to period, showing strong shifts in cranial measurements through time. These analyses show that while there is no clear-cut taxonomic structure in European populations that would justify the traditional classifications based on the crania, there are significant and important associations with both language affiliation, geography, and time period, in this order. These patterns are likely to have become established through the migration and subsequent expansion of populations into their areas of occupation during the time interval studied rather than by geographic differentiation in situ.     

Cranial morphological variation of Dromiciops gliroides (Microbiotheria) along its geographical distribution in south-central Chile: A three-dimensional analysis

We analyzed the variation in cranial morphology of the marsupial Dromiciops gliroides along its distribution in south-central Chile. We evaluated whether the cranial morphological variation is congruent with the phylogeographic structure previously observed in this species. We built three-dimensional models of 69 crania on which we digitized 30 landmarks. We used standard geometric morphometric methods to extract and analyze the shape and size components of the crania. Our data showed a subtle but consistent cranial size and shape variation along the studied distributional range, suggesting a geographic variation pattern rather than a phylogeographic structuring. Indeed, our multivariate analyses recovered a subtle morphological differentiation between island and mainland populations, contrary to what is suggested by a former phylogeographic study. We detected that either the cranial size variation, as well as the insularity and the latitude could be important factors underlying the cranial shape changes. We suggest that an interplay of historical and contemporary processes could be shaping the morphological pattern observed in this marsupial.     

Examining determinants of geographic variation in colorectal cancer mortality in North Carolina: A spatial analysis approach

PurposeA recent study using national data from 2000 to 2009 identified colorectal cancer (CRC) mortality “hotspots” in 11 counties of North Carolina (NC). In this study, we used more recent, state-specific data to investigate the county-level determinants of geographic variation in NC through a geospatial analytic approach.MethodUsing NC CRC mortality data from 2003 to 2013, we first conducted clustering analysis to confirm spatial dependence. Spatial economic models were then used to incorporate spatial structure to estimate the association between determinants and CRC mortality. We included county-level data on socio-demographic characteristics, access and quality of healthcare, behavioral risk factors (CRC screening, obesity, and cigarette smoking), and urbanicity. Due to correlation among screening, obesity and quality of healthcare, we combined these factors to form a cumulative risk group variable in the analysis.ResultsWe confirmed the existence of spatial dependence and identified clusters of elevated CRC mortality rates in NC counties. Using a spatial lag model, we found significant interaction effect between CRC risk groups and socioeconomic deprivation. Higher CRC mortality rates were also associated with rural counties with large towns compared to urban counties.ConclusionOur findings depicted a spatial diffusion process of CRC mortality rates across NC counties, demonstrated intertwined effects between SES deprivation and behavioral risks in shaping CRC mortality at area-level, and identified counties with high CRC mortality that were also deprived in multiple factors. These results suggest interventions to reduce geographic variation in CRC mortality should develop multifaceted strategies and work through shared resources in neighboring areas.     

基于空间自相关的东海带鱼聚集特征年代际变化

海洋鱼类通常以集群的形式分布在特定空间内,具有高度的空间异质性特征.基于1971—2011年中国机轮拖网渔业捕捞统计及底拖网科学调查获取的东海带鱼数据,并结合夏季研究水域内海表温度及黑潮区PN断面表层盐度数据,利用空间统计方法对东海带鱼资源的聚集特征进行年代际分析.全局自相关性分析显示,1971—2011年Moran I指数先减小再增大且均为正值,表明东海带鱼聚集性呈先减弱再增强的趋势;PN断面表层盐度均值变化趋势与之相反.局部自相关性分析显示,除1971年带鱼热点分布受作业水域范围限制而集中在中部外,1981—2011年带鱼分布热点区域呈现先向南部外海移动,随后逐步向北部外海移动的格局,且相应的热点分布范围亦呈现先集中后扩散的趋势.带鱼热点分布区域随海表温度第一模态变化做适应性移动,且均靠近黑潮北分支左侧水域.     

Genetic variation at twentythree microsatellite loci in sixteen human populations

We have analysed genetic variation at 23 microsatellite loci in a global sample of 16 ethnically and geographically diverse human populations. On the basis of their ancestral heritage and geographic locations, the studied populations can be divided into five major groups, viz. African, Caucasian, Asian Mongoloid, American Indian and Pacific Islander. With respect to the distribution of alleles at the 23 loci, large variability exists among the examined populations. However, with the exception of the American Indians and the Pacific Islanders, populations within a continental group show a greater degree of similarity. Phylogenetic analyses based on allele frequencies at the examined loci show that the first split of the present-day human populations had occurred between the Africans and all of the non-African populations, lending support to an African origin of modern human populations. Gene diversity analyses show that the coefficient of gene diversity estimated from the 23 loci is, in general, larger for populations that have remained isolated and probably of smaller effective sizes, such as the American Indians and the Pacific Islanders. These analyses also demonstrate that the component of total gene diversity, which is attributed to variation between groups of populations, is significantly larger than that among populations within each group. The empirical data presented in this work and their analyses reaffirm that evolutionary histories and the extent of genetic variation among human populations can be studied using microsatellite loci.     

Body size patterns in Drosophila inhabiting a mesocosm: interactive effects of spatial variation in temperature and abundance

Body size is a major component of fitness. However, the relative contributions of different factors to optimal size, and the determinants of spatial and temporal variation in size, have not been fully established empirically. Here, we use a mesocosm of a Drosophilidae assemblage inhabiting decaying nectarines to investigate the influence of spatial variation in temperature on adult body size in Drosophila simulans Sturtevant. Two treatments were established; one in the sun where developing larvae were exposed to high temperatures and the other in the shade where temperature conditions were milder. The simple developmental effects of temperature differences (i.e. larger flies are likely to emerge from cooler environments), or the simple effects of stressful temperatures (i.e. high temperatures yield wing abnormalities and smaller flies), were overridden by interactive effects between temperature and larval density. Emergences were lower in the sun than shade, probably as a result of temperature-induced mortality. However, flies attained the same final sizes in the shade and sun. In addition, abnormally winged flies were clustered in the shaded treatments. In the shade treatments, where emergences were higher than in the sun, stressful conditions as a result of high larval density likely resulted in wing abnormalities and small size. Consequently, there was little spatial variation in size across the mesocosm, but substantial spatial variation in abundance. Under natural conditions both mortality and non-lethal effects of temperature and/or crowding are likely to play a role in the evolution of body size.     

Interpopulational variation in recovery time from chill coma along a geographic gradient: a study in the common woodlouse, Porcellio laevis

Extreme temperatures restrict the performance of terrestrial arthropods and variations in low temperatures on a latitudinal scale influence physiological variables. Recovery time from chill coma is a measure of cold tolerance and it is a good index of climatic adaptation. We tested differences in recovery time of the common woodlouse (Porcellio laevis) exposed to different thermal conditions. Individuals were sampled from four different populations in Chile, spanning a latitudinal range of approximately 10 degrees . Significant differences were found in recovery time among experimental temperatures and among populations, but no interaction between these factors. The results of recovery time in P. laevis showed a positive increment with annual mean minimum temperature, indicating that there is geographical variation in recovery time. While body mass presented interpopulational variation, this variation was not associated with thermal variables or latitude. Overall, our results agree with previous studies in the sense that recovery time from chill coma decreases towards high latitudes, and it is independent of taxa, continent and hemisphere.     

Geographic variation in embryonic development time and stage of diapause in a grasshopper

Embryonic development times and the stage at which embryonic diapause occurs varied dramatically among 23 populations of the Melanoplus sanguinipes/ devastator species complex in California, USA. Grasshoppers were collected from a wide range of latitudes (32°57N to 41°20N) and altitudes (10m to 3031 m), spanning much of the variation in climatic conditions experienced by these insects in California. When reared in a common garden in the laboratory, total embryonic development times were positively correlated to the mean annual temperature of the habitat from which the grasshoppers were collected (varying from about 19 days to 32 days when reared at 27°C). These grasshoppers overwinter as diapausing eggs and the proportion of embryonic development completed prior to diapause was significantly higher in populations collected from cool habitats (>70%) than in populations collected from warm environments (<26%). The length of pre-diapause development time is determined by the stage of embryonic development at which diapause occurs, and varies considerably among populations of these grasshoppers; grasshoppers from warmer environments tend to diapause at very early stages of embryogenesis, while grasshoppers from cooler environments diapause at very late stages. The combined effect of variation in embryonic development times and variation in the stage at which diapause occurs results in a dramatic reduction in the time needed to hatch in the spring; populations from warm environments required up to 20 days (at 27°C) to hatch while populations from cool environments required as few as 5 days to complete embryonic development prior to hatching. Egg size also varied significantly among populations, but tended to be larger in populations with shorter embryonic development times. Significant family effects were observed for development time and stage of diapause, suggesting significant heritabilities for these traits, although maternal effects may also contribute to family level variation. We interpret these findings to support the hypothesis that embryonic development time and the stage of embryonic diapause have evolved as adaptations to prevailing season lengths in the study populations.     

Incorporating spatial autocorrelation in rarefaction methods: Implications for ecologists and conservation biologists

Recently, methods for constructing Spatially Explicit Rarefaction (SER) curves have been introduced in the scientific literature to describe the relation between the recorded species richness and sampling effort and taking into account for the spatial autocorrelation in the data. Despite these methodological advances, the use of SERs has not become routine and ecologists continue to use rarefaction methods that are not spatially explicit. Using two study cases from Italian vegetation surveys, we demonstrate that classic rarefaction methods that do not account for spatial structure can produce inaccurate results. Furthermore, our goal in this paper is to demonstrate how SERs can overcome the problem of spatial autocorrelation in the analysis of plant or animal communities. Our analyses demonstrate that using a spatially-explicit method for constructing rarefaction curves can substantially alter estimates of relative species richness. For both analyzed data sets, we found that the rank ordering of standardized species richness estimates was reversed between the two methods. We strongly advise the use of Spatially Explicit Rarefaction methods when analyzing biodiversity: the inclusion of spatial autocorrelation into rarefaction analyses can substantially alter conclusions and change the way we might prioritize or manage nature reserves.     

Correspondence of male-to-male aggression to spatial distribution of individuals in field populations of a subsocial spider mite

The intensity of male-to-male aggression, when evaluated in the laboratory, varies geographically in a subsocial spider mite, Schizotetranychus miscanthi Saito. This species includes two types of populations showing different clinal trends in aggression. We examined the relationships between the intensity of male aggression and the distribution patterns of individuals within nests for 22 field populations of the "low-aggression group." The intensity of male aggression was negatively correlated with the index of male aggregation across nests, which strongly suggests that aggression measured under experimental conditions is actually reflected in the interaction between males within nests in the field. The intensity of male aggression was also negatively correlated with the mean number of males per nest, suggesting that mortal fight between males, observed in the laboratory, actually occurs in the field. Received: October 14, 1999 / Accepted: May 22, 2000     

Geographic variation in Pemphigus populitransversus (Insecta: Aphididae)*†

The geographic variation of 33 morphological characters of two morphs of the gall-forming aphid Pemphigus populitransversus is studied in 214 locality samples. Among-locality variation ranges from 1 to 69% in the elongate morph and from 0 to 44% in the globular morph. The design of the study permits separation of interlocality correlations from intralocality correlations. The former are partly a function of the latter, confirming early observations on another Pemphigus species and on ticks. Factor analyses of both correlation matrices for both morphs yield four factors. Within localities these factors agree for the two morphs; among localities only one factor corresponds. Multiple discriminant analyses among localities of the two data sets do not correspond. There is little correlation between characters of stem mother and alate morphotypes within localities but such correlations are strong among localities. Maps are furnished for characters representing the independent dimensions of variation for each morph. Patterns of variation are shown to be significant by spatial autocorrelation analysis for both morphs but are much more marked in the elongate morph. Significant positive autocorrelation occurs up to 1000 km in the elongate morph – mostly only up to 200 km in the globular morph. There are two to three geographic variation patterns in the elongate morph, whereas in the globular morph the classes of patterns are less well defined and involve few characters. The environmental factors to which the globular and elongate morphs are adapting would appear to have different autocorrelation patterns. In each morph the patterns are clearly different and cannot be explained by a single microevolutionary process. The findings are compared with an earlier study in the related and largely sympatric P. populicaulis.     

Population genetic study of allozyme variation in natural populations of Drosophila antonietae (Insecta, Diptera)

Drosophila antonietae is an endemic South American cactophilic species found in relictual xerophytic vegetation, mostly associated with Cereus hildmaniannus cactus. Low differentiation among populations of this species has been detected using several markers. In this work, we performed an allozyme genetic variability analysis of 11 natural populations of D. antonietae and included a discussion about the possible influences of several evolutionary processes that might be acting to maintain the pattern observed. The genetic variability of 14 isoenzyme loci was analysed and showed a high genetic diversity (average observed heterozygosity = 0.319) and a moderate genetic differentiation among populations ( F statistics = 0.0723). A correlation between genetic and geographical and ecological distances was detected among pairs of populations and the regional equilibrium analysis was thus applied. This analysis resulted in Nm (number of migrants) of approximately 3.21, indicating that moderate levels of both gene flow and genetic drift occur in this species, with gene flow overlapping genetic drift. However, considering ecological features of drosophilids, we propose a hypothesis to explain the moderate differentiation encountered as a result of three different processes, or a combination of them: (1) gene flow; (2) a short period of differentiation, i.e. maintenance of ancestral polymorphism; and (3) action of natural selection. Moreover, if gene flow is present, the high genetic diversity compared with other cactophilic and non-cactophilic species could be due to differential selection in different populations followed by gene exchange among them. These factors are discussed in the light of D. antonietae 's historical and evolutionary association with the host cactus.     

Patterns and causes of spatial variation in the reproductive success of a desert annual

Summary This study examines patterns and causes of variation in the reproductive success of the desert annual Stipa capensis. Three nested scales of variation were analyzed: variation between individuals of the same plot, variation between different plots of the same habitat, and variation between different habitats in the same region. Perturbation experiments (irrigation and neighbors removal) were performed to test the effects of heterogeneity in soil water and neighborhood competition on the magnitude of variation in each scale. The results demonstrate that variation of reproductive success was highest within plots, lowest between plots, and moderate between habitats. Soil water heterogeneity contributed to spatial variation in all scales but was most important for differences between habitats. Neighborhood competition increased the variation within plots, but decreased the variation between habitats. The results further demonstrate that water limitation was negatively correlated with the position of the habitat along the run-off/run-on gradient. An opposite trend was obtained for the effect of competition.     

Ontogeny of robusticity of craniofacial traits in modern humans: A study of South American populations

To date, differences in craniofacial robusticity among modern and fossil humans have been primarily addressed by analyzing adult individuals; thus, the developmental basis of such differentiation remains poorly understood. This article aims to analyze the ontogenetic development of craniofacial robusticity in human populations from South America. Geometric morphometric methods were used to describe cranial traits in lateral view by using landmarks and semilandmarks. We compare the patterns of variation among populations obtained with subadults and adults to determine whether population‐specific differences are evident at early postnatal ontogeny, compare ontogenetic allometric trajectories to ascertain whether changes in the ontogeny of shape contribute to the differentiation of adult morphologies, and estimate the amount of size change that occurs during growth along each population‐specific trajectory. The results obtained indicate that the pattern of interpopulation variation in shape and size is already established at the age of 5 years, meaning that processes acting early during ontogeny contribute to the adult variation. The ontogenetic allometric trajectories are not parallel among all samples, suggesting the divergence in the size‐related shape changes. Finally, the extension of ontogenetic trajectories also seems to contribute to shape variation observed among adults. Am J Phys Anthropol 2010. © 2009 Wiley‐Liss, Inc.     

Variation in digestive performance between geographically disjunct populations of Atlantic salmon: countergradient in passage time and digestion rate

European Atlantic salmon (Salmo salar) populations inhabit rivers from northern Portugal to northern Norway across a wide spectrum of environmental variability. To address whether single physical factors might lead to genetic divergence of isolated populations, we compared the digestive performances total digestibility, relative nitrogen digestibility, passage time, and digestion rate (g dry matter · h^–1) — of northern (Scotland) and southern (Asturias, northern Spain) populations at three temperature regimes (5, 12, and 20° C). Total dry matter digestibilities increased directly with temperature but were similar for both populations at each of the three trials. Relative nitrogen digestibility did not differ between populations nor among temperature regimes. In contrast, passage time was significantly longer for low-than for high-latitude fish at both 5 and 20° C. When the percentage of food digested and the passage time were integrated as digestion rates (food digested per unit time), a significant population × temperature interaction consistent with a genotype × environment interaction was detected in addition to the population and temperature effects. This implies that not only is the digestive performance of the high-latitude population higher throughout the range of temperatures examined, but moreover the difference is reinforced at high temperatures, where the digestion rate of high-latitude fish was 1.6 times greater. Taken together, these two results provide preliminary evidence for countergradient variation in digestive rates of salmonids in response to variation in growth opportunity. The data support our previous work on the same two populations showing differences in growth rates, and underlie one of the possible mechnisms leading to more rapid growth of the high-latitude fish when both populations are reared in a common environment.     

Fragmentation by weirs in a riverine system: A study of genetic variation in time and space among populations of European grayling (Thymallus thymallus) in a Danish river system

Human induced habitat alterations affect the genetic structure of many fish populations. Weirs in particular have caused fragmented populations previously connected by gene-flow. We studied the effects of weirs on the distribution of genetic variation within European grayling (Thymallus thymallus) populations from the Skjern River, Denmark. We compared microsatellite data from DNA extracted from historic scale samples collected 60 years ago with data from contemporary samples. Pairwise multilocus F _ST estimates between all contemporary population samples were significant as well as exact tests for population differentiation. Assignment tests of individuals to a set of baseline samples showed correct assignment to the population of origin of between 54 and 79%. Assignment of individuals from recent samples to the historic population samples showed highly variable results (3–83%) of correct assignment suggesting different population histories. Pairwise multilocus F _ST estimates were significantly correlated with the number of intervening weirs but not with waterway distance. A simulation procedure was used to estimate differences in relative population sizes, which indicated that the main river population was approximately three times larger than those of the tributaries. There were no signs of any loss of genetic variation for the river system as a whole during these 60 years. The results show that weirs can be an important factor for creating the current distribution patterns of genetic variation among grayling populations, most likely by only allowing passive downstream drift of fry and obstructing active upstream migration. This revised version was published online in July 2006 with corrections to the Cover Date.     

Spatio‐temporal variation in European starling reproductive success at multiple small spatial scales

Understanding population dynamics requires spatio‐temporal variation in demography to be measured across appropriate spatial and temporal scales. However, the most appropriate spatial scale(s) may not be obvious, few datasets cover sufficient time periods, and key demographic rates are often incompletely measured. Consequently, it is often assumed that demography will be spatially homogeneous within populations that lack obvious subdivision. Here, we quantify small‐scale spatial and temporal variation in a key demographic rate, reproductive success (RS), within an apparently contiguous population of European starlings. We used hierarchical cluster analysis to define spatial clusters of nest sites at multiple small spatial scales and long‐term data to test the hypothesis that small‐scale spatio‐temporal variation in RS occurred. RS was measured as the number of chicks alive ca. 12 days posthatch either per first brood or per nest site per breeding season (thereby incorporating multiple breeding attempts). First brood RS varied substantially among spatial clusters and years. Furthermore, the pattern of spatial variation was stable across years; some nest clusters consistently produced more chicks than others. Total seasonal RS also varied substantially among spatial clusters and years. However, the magnitude of variation was much larger and the pattern of spatial variation was no longer temporally consistent. Furthermore, the estimated magnitude of spatial variation in RS was greater at smaller spatial scales. We thereby demonstrate substantial spatial, temporal, and spatio‐temporal variation in RS occurring at very small spatial scales. We show that the estimated magnitude of this variation depended on spatial scale and that spatio‐temporal variation would not have been detected if season‐long RS had not been measured. Such small‐scale spatio‐temporal variation should be incorporated into empirical and theoretical treatments of population dynamics.     

The adaptedness of the floral phenotype in a relict endemic, hawkmoth-pollinated violet. 2. Patterns of variation among disjunct populations

This study examines patterns of variation in quantitative floral traits among 18 disjunct populations of Viola cazorlensis (Violaceae), a relict endemic violet of south-eastern Spain. At all sites, the species is almost exclusively pollinated by a single species of day-flying hawkmoth. Differences between populations were significant for all traits examined, and population means exhibit a broad range of variation. When all characters are considered together, each population displays a unique combination of characters. Despite interpopulation differences in character means, local populations retain most of the variability of the entire species. Floral traits do not vary in unison among flowers, and at least four different subsets of independently varying traits are identifiable. Floral similarity between populations of V. cazorlensis was largely unrelated to geographic proximity, as revealed by analyses at both large and small geographic scales. The geographic pattern of floral variation among populations represents a random patchwork, with unique combinations of character means occurring randomly across the study region. Marked population differences in quantitative floral traits in spite of spatial constancy in the identity of pollinators, a disintegrated floral phenotype, and prevailingly random geographic variation among populations, suggest low adaptedness of the floral phenotype of V. cazorlensis to its current hawkmoth pollinators.     

Variation in larval black fly populations at three sites in a stream system over five years (Diptera:Simuliidae)

Five years of monthly samples taken from three sites in the Broad Cove River, two at lake outlets and one a kilometer downstream from an outlet were analyzed. Considerable variations in the population of each species between sites and years were observed. Fluctuations in the populations were not always consistent from site to site or between species at the same site from one year to the next. As all sites were on the same stream and within 3 km of each other with only slight altitude differences climatic factors were not a major factor producing variations observed between sites. Also the previous years population level did not appear to be directly related to the following seasons population level. Apparently localized conditions at a site were exerting a marked influence on the larval simuliid population at each site.     

Wide variation in spatial genetic structure between natural populations of the European beech (Fagus sylvatica) and its implications for SGS comparability

Identification and quantification of spatial genetic structure (SGS) within populations remains a central element of understanding population structure at the local scale. Understanding such structure can inform on aspects of the species' biology, such as establishment patterns and gene dispersal distance, in addition to sampling design for genetic resource management and conservation. However, recent work has identified that variation in factors such as sampling methodology, population characteristics and marker system can all lead to significant variation in SGS estimates. Consequently, the extent to which estimates of SGS can be relied on to inform on the biology of a species or differentiate between experimental treatments is open to doubt. Following on from a recent report of unusually extensive SGS when assessed using amplified fragment length polymorphisms in the tree Fagus sylvatica, we explored whether this marker system led to similarly high estimates of SGS extent in other apparently similar populations of this species. In the three populations assessed, SGS extent was even stronger than this previously reported maximum, extending up to 360 m, an increase in up to 800% in comparison with the generally accepted maximum of 30-40 m based on the literature. Within this species, wide variation in SGS estimates exists, whether quantified as SGS intensity, extent or the Sp parameter. Consequently, we argue that greater standardization should be applied in sample design and SGS estimation and highlight five steps that can be taken to maximize the comparability between SGS estimates.