Larval abundance of Chironomus circumdatus in relation to biotic and abiotic factors

Larval abundance of Chironomus circumdatus in sewage canal and pond systems was studied during 1988–1990. Monthly changes in the morphometric features of the pond revealed that both total and littoral areas progressively decreased from 1063 and 107 m² in December 1988 to 151 and 43 m² in May '89; the decrease during the year 1989–1990 was from 1116 and 92 m² in October to 109 and 31 m² in May. A significant negative correlation (r= – 0.52) was obtained for the relation between littoral area and larval density in the pond. Larval density and biomass depended generally on the nature of the substrate and quantity of organic matter. Larval density of Ch. circumdatus was positively correlated with O₂, bacterial count and organic matter content, but negatively correlated with CO₂ level. Daily removal of organic matter by the larvae ranged from 20 to 31 % of the available organic matter in the sewage canal and from 3 to 11 % in the pond.     

Urea degradation by picophytoplankton in the euphotic zone of Lake Biwa

The ability of photoautotrophic picoplankton Synechococcus to degrade urea was examined in the euphotic zone of Lake Biwa. Samples were divided into pico (0.2–2.0 μm) and larger (>2.0 μm) size fractions by filtration. The rates of urea degradation (the sum of the rates of incorporation of carbon into phytoplankton cells and of liberation of CO₂ into water) measured by radiocarbon urea were 8 and 17 μmol urea m⁻³ day⁻¹ in June and July, respectively, for the picophytoplankton in the surface water, and 196 and 96 μmol urea m⁻³ day⁻¹, respectively for the larger phytoplankton. The rates decreased with depth, somewhat similar to the vertical profiles of the photosynthetic rate. The urea degradation rates were obviously high under light conditions. In daylight, urea was degraded into two phases, carbon incorporation and CO₂ liberation, whereas in the dark it was degraded only into the CO₂ liberation phase. The contribution of picophytoplankton to total phytoplankton in urea degradation was high in the subsurface to lower euphotic layer. Urea degradation activity was higher in the picophytoplankton fraction than in the larger phytoplankton fraction. Shorter residence times of urea were obtained in the upper euphotic zone. The contribution of picophytoplankton to urea cycling was 4% to 35%. The present results suggest that the picophytoplankton Synechococcus is able to degrade urea and effectively makes use of regenerated urea as a nitrogen source in the euphotic layer, and that picophytoplankton play an important role in the biogeochemical nitrogen cycle in Lake Biwa. Received: June 25, 1998 / Accepted: February 10, 1999     

Assessing the vulnerability of riparian vegetation to invasion by Mimulus guttatus: relative importance of biotic and abiotic variables in determining species occurrence and abundance

Riparian habitats are particularly susceptible to invasion by non‐native plants. At present, attempts to build consensus as to what the primary drivers of plant invasion in riparian ecosystems might be is hindered by the absence of common standards for data collected on plant species (e.g. occurrence, or relative abundance). Mimulus guttatus L., a non‐native riparian plant species, was used as a model to determine how environmental drivers influence two aspects of invasibility: species occurrence and abundance (assessed in relation to three variables number of patches, patch area and number of stems per patch). Mimulus occurrence and abundance, together with 20 environmental variables, were surveyed in almost 700 contiguous 50‐m‐long riverbank segments within a catchment in north‐east Scotland. More than half of the segments had been colonized by Mimulus. Occurrence and number of patches responded to similar environmental gradients, particularly bare sediment, boulders, high soil moisture, short‐statured ruderal communities, and open canopies, and tended to be highest downstream where the river was widest. In contrast to occurrence and patch number, patch area and stem number per patch were higher in the upper reaches of the catchment and were positively associated with low tree canopy and vegetation dominated by light‐demanding species and smaller‐statured species. Patch area and stem number per patch were also positively related to grazing. This study has highlighted the importance of assessing more than one measure of invasion success (occurrence or patch number and either patch area or stem number per patch), as they are each determined by a different suite of environmental variables. Abiotic factors, such as sediment availability and presence of boulders, appeared to be the major determinants of occurrence and patch number, whereas biotic factors, such as interspecific competition and grazing, were more important ecological determinants underlying area and stem number per patch.     

Subject: Distribution: Influence of biotic and abiotic factors

Research Notes on Avian Biology 1994: Selected Contributions from the 21st International Ornithological CongressEcology: Distribution

Subject: Distribution: Influence of biotic and abiotic factors     

Termite cohabitation: the relative effect of biotic and abiotic factors on mound biodiversity

1. Termites are important ecosystem engineers that improve primary productivity in trees and animal diversity outside their mounds. However, their ecological relationship with the species nesting inside their mounds is poorly understood. 2. The presence of termite cohabitant colonies inside 145 Cornitermes cumulans mounds of known size and location was recorded. Using network‐theoretical methods in conjunction with a suite of statistical analyses, the relative influence of biotic and abiotic drivers of termite within‐mound diversity on the composition and species richness of the termite community was investigated, specifically builder presence and physical aspects of the mound. 3. We found that richness inside the mound increases with mound size, and the species similarity between mounds decreases with distance. The physical attributes (abiotic drivers) of termite mounds (size and relative distance to other mounds) are the strongest predictors of termite species richness and composition. The biotic driver (presence of a builder colony) has an important, though smaller, negative effect on within‐mound termite species richness. 4. The findings suggest that the termites' physical manipulation of their environment is an important driver of within‐mound community diversity. More generally, the approach taken here, using a combination of statistical and network‐theoretical methods, can be used to determine the relative importance of abiotic and biotic drivers of diversity in a wide range of communities of interacting species.     

Patterns of Fusarium community structure and abundance in relation to spatial, abiotic and biotic factors in soil

Members of the Fusarium genus are important components of many plant–soil systems worldwide and are responsible for many crop diseases. Knowledge of the relative influence of biotic and abiotic factors on this genus is therefore of broad economic and ecological importance. In order to address this issue, we examined Fusarium communities in soils nearby apparently healthy and symptomatic asparagus plants in 50 fields scattered in four agricultural regions of Québec, Canada. Fusarium community structure and abundance were assessed using genus-specific PCR-denaturing gradient gel electrophoresis and CFU counts, respectively. Multivariate statistical analyses were used to detect community patterns related to spatial, abiotic and biotic factors. Results suggested that Fusarium community structure (i.e. the presence and absence of the different Fusarium sequence variants in the samples) in soil is mainly related to biotic factors (arbuscular mycorrhizal fungi and bacterial community structure), whereas Fusarium abundance is more closely related to abiotic factors (mainly clay, organic matter, NH₄, Na and Cu). Some degree of influence of spatial patterns was also observed on both Fusarium community structure and abundance with, for instance, a large regional variation in Fusarium community structure. However, Fusarium community structure was not directly related to the disease status of nearby asparagus plants.     

Spatial distribution and seasonal changes of pesticides in Lake Biwa,Japan

The spatial distribution and seasonal variation in the concentrations in Lake Biwa of pesticides used in paddy fields were studied. Lake Biwa is the largest lake in Japan and is a recognized water resource for 14 million people in the Kinki district. Samples were collected nine times from April to December 2001 at ten sites within the lake and at the mouths of six influent rivers. Weekly sampling was also carried out at a single site on an effluent river. Among the 20 pesticides analyzed, the detection frequencies in surface water were almost 100% for simetryn, bromobutide, and isoprothiolane; around 75% for molinate and pyroquilon; around 30% for three herbicides and one fungicide; and almost zero for the remaining substances. The maximum concentrations of pesticides detected frequently in the lake were in the range 0.1–0.4µgl^–1. The occurrence of a few pesticides below the thermocline may be explained by thermal stratification and vertical circulation. Although the thermocline suppressed vertical diffusion in spring and summer during pesticide application periods, a few pesticides remaining at the surface of the lake in winter were transported to the hypolimnion by vertical circulation and remained there even after the reestablishment of the thermocline. The half-lives of pesticides in the lake were estimated to be more than a year for simetryn, half a year for bromobutide, 1.5 months for molinate, and 1 month for dimepiperate. The main cause of elimination for molinate and dimepiperate was estimated to be degradation, that for simetryn was outflow, and for bromobutide both degradation and outflow were significant.     

Midden formation by octopuses: The role of biotic and abiotic factors

Many octopus species consume their prey in a shelter, where discarded prey items accumulate to form a midden. The shelters of Octopus bimaculatus rarely have middens. Some discarded prey items are present at 20% of the shelters of O. bimaculatus, but these do not accumulate to form middens. A field experiment using artificial middens demonstrated that currents and/or surge moved some bivalve shells, and hermit crabs rapidly removed snail shells from the middens. Snails are very important in the diet of O. bimaculatus but not most other octopus species; middens do not form around O. bimaculatus shelters because hermit crabs remove the discarded snail shells.     

Relative contributions of biotic and abiotic factors to the spatial variation of litter stock in a mature subtropical forest

AimsDead plant material (i.e. litter) is the major source of soil organic matter and thus plays a fundamental role in regulating soil carbon cycling in global forest ecosystems. The storage of litter is jointly determined by its production from plants and decomposition in a given environment. However, only few studies have explored the relative importance of environmental (i.e. abiotic) and plant (i.e. biotic) factors in driving the spatial variation of litter mass. The objective of this study is to quantify the relative contributions of biotic and abiotic factors in affecting the spatial variation of aboveground litter stock in a mature subtropical forest.     

The importance of measuring biotic and abiotic factors in the lower egg pocket to predict coho salmon egg survival

Based on results from simulated redds of coho salmon Oncorhynchus kisutch , the amount of fine sediment <0·5 mm in the lower half of the egg pocket, rather than the entire egg pocket of the redd, was a strong predictor of egg survival to hatching (  r ²  = 0·62). The relationship was much stronger than observed in other studies, which typically ignore egg pocket structure. Abundance of a fish egg-eating worm, Haplotaxis ichthyophagous , an oligochaete that may have been attracted to fine sediment and dead eggs in the egg pocket, was also associated with a decrease in egg survival. The worm, however, accounted for little of the variance in survival compared to fine sediment. Only 10% fine sediment (<0·5 mm) in the lower pocket was required to decrease survival from 100 to 5%. Other abiotic factors had weaker (gravel permeability) or non-existent (dissolved oxygen) correlations with survival.     

Microbial communities in oligotrophic Lake Toya,Japan

 The vertical distributions of planktonic bacteria, chroococcoid cyanobacteria, and heterotrophic nanoflagellates (HNF) were examined in Lake Toya, an oligotrophic lake located in Hokkaido, the northern island of Japan, at monthly intervals from May 1993 to May 1994. The abundances of bacteria, cyanobacteria, and HNF during the study period ranged from 10⁴ to 10⁵,10² to 10⁴, 10 to 10² cells ml⁻¹, respectively. The range of bacterial abundances was among the lowest previously reported from other oligotrophic lakes. The vertical distributions of both bacteria and cyanobacteria were influenced by thermal stratification: they were homogeneous throughout the water column during the circulation period (January to April) and heterogeneous during the period of stratification (June to November). During the period of stratification, the cyanobacterial abundance decreased toward the surface in the euphotic zone while the frequency of diving cells (FDC) increased, suggesting that grazing pressure was high near the surface. This hypothesis was supported by the relatively high abundance of HNF at the surface and the negative correlation between HNF and cyanobacterial abundances in the euphotic zone (r = −0.503, n = 33, P < 0.05). On the other hand, multiple regression analysis revealed that 52% of the variation in bacterial abundance in the stratified period can be explained by chlorophyll a concentration, water temperature, and HNF abundance (df = 3, 45; F = 16.2; P < 0.01), suggesting that both substrate limitation and grazing loss by HNF were important factors controlling bacterial abundance in the lake. Received: June 21, 2002 / Accepted: October 16, 2002 Present address: 5-2-2-18-805 Kikusui-motomachi, Shiroishi, Sapporo 003-0825, Japan Present address: School of Environmental Science, University of Shiga Prefecture, 2500 Hassaka-cho, Hikone 522-8533, Japan Tel. +81-749-28-8307; Fax +81-749-28-8463 e-mail: ban@ses.usp.ac.jp Acknowledgments We thank Dr. H. Ueda for encouraging this study and Mr. Haruna and the members of the Plankton Laboratory, Hokkaido University, for their help in sampling. We also thank two anonymous reviewers for their critical comments. Correspondence to:S. Ban     

Effects of biotic and abiotic factors on the distribution of trout and salmon along a longitudinal stream gradient

Synopsis We examined the influence of biotic and abiotic factors on the distribution, abundance, and condition of salmonid fishes along a stream gradient. We observed a longitudinal change in fish distribution with native cutthroat trout, Oncorhynchus clarki utah, and introduced brown trout, Salmo trutta, demonstrating a distinct pattern of allopatry. Cutthroat trout dominated high elevation reaches, while reaches at lower elevations were dominated by brown trout. A transition zone between these populations was associated with lower total trout abundance, consistent changes in temperature and discharge, and differences in dietary preference. Variation in cutthroat trout abundance was best explained by a model including the abundance of brown trout and diel temperature, whereas variation in brown trout abundance was best explained by a model including the abundance of cutthroat trout and discharge. These results suggest the potential for condition-mediated competition between the two species. The results from our study can aid biologists in prioritizing conservation activities and in developing robust management strategies for cutthroat trout.     

The importance of disturbance by fire and other abiotic and biotic factors in driving cheatgrass invasion varies based on invasion stage

Disturbances create fluctuations in resource availability that alter abiotic and biotic constraints. Exotic invader response may be due to multiple factors related to disturbance regimes and complex interactions between other small- and large-scale abiotic and biotic processes that may vary across invasion stages. We explore how cheatgrass responds to both frequency and season of prescribed burning for a 10-year period in ponderosa pine forested stands. To understand interactions of fire disturbance, other abiotic factors, biotic resistance, and propagule pressure, we use long-term data from different spatial scales representing different invasion stages (local establishment or spread and broader scale extent/impact) to model cheatgrass dynamics. We found that after 10 years, cheatgrass cover increased with fall burning regardless of burn frequency (1 burn vs. 3 burns). There was no evidence that cheatgrass invasion is decreasing through time even in areas burned only once. Factors important for explaining local fine-scale cheatgrass establishment and spread, and broader scale extent/impact varied. The spatial extent of the first burns facilitated fine-scale cheatgrass establishment while bare soil cover constrained establishment. Biotic resistance, in the form of native annual forb cover, constrained fine-scale cheatgrass spread. Initial cheatgrass abundance in 2002, a factor related to propagule pressure, was key for explaining the broader scale extent/impact of cheatgrass by 2012. Biotic resistance, in the form of native perennial grass cover, constrained extent/impact but only when initial cheatgrass abundance was low. Our findings regarding factors affecting invasion dynamics may be useful to consider for future restoration and conservation efforts in burned ponderosa pine forests.     

贵州高原湖泊细菌和病毒分布特征及影响因素

应用SYBR Green Ⅰ荧光显微镜计数法,研究了贵州阿哈湖和百花湖细菌和病毒丰度的垂直分布特征,探讨了它们与温度、pH、溶解氧(DO)、电导率和溶解有机碳(DOC)之间的关系.两湖DOC的浓度范围为1.48～2.96 mg·L-1,细菌丰度为(3.32～16.6)×106个·ml-1,病毒丰度为(1.87～12.5)×107个·ml-1,病毒丰度与细菌丰度的比值(VBR)变化范围为4.09～12.77,平均值均为百花湖(BH)>阿哈湖入湖区(AHB)>阿哈湖湖心区(AHA).细菌和病毒丰度由湖水表层至底层呈减少趋势.两湖细菌丰度均与温度、pH、DO呈显著正相关,与电导率呈显著负相关,且与病毒丰度呈极显著性正相关.阿哈湖细菌丰度与DOC显著正相关.在阿哈湖湖心区,病毒丰度与DOC呈显著正相关.在阿哈湖入湖区,病毒丰度与DOC无相关性.百花湖中,细菌、病毒丰度均与DOC无相关性.     

NAC转录因子在植物抗病和抗非生物胁迫反应中的作用

NAC转录因子是植物特有的一类转录因子,其共同特点是在N端含有一段高度保守、由约150个氨基酸组成的NAC结构域,而C端为高度变异的转录调控区。研究表明,NAC转录因子不仅参与植物生长发育的调控,而且在植物抗逆反应中具有重要的调控作用。文章着重介绍NAC转录因子在植物抗逆反应中的作用及其调控机制,并简要讨论NAC转录因子生物学功能的研究方向。     

Relative importance of abiotic and land use factors in explaining variation in woody vegetation in a French rural landscape

Abstract. In a rural landscape, scale vegetation patterns of woody species are controlled by both abiotic and land use factors. The woody species composition in 126 sample plots was analysed and land use factors and some abiotic parameters were quantified using land register data. The relative importance of land use and abiotic factors was differentiated using a partial Canonical Correspondence Analysis (CCA); the influence of land use in neighbouring areas was explored by changing the scale of land use sampling. The woody species composition appears to be controlled equally by land use and abiotic factors. The fraction of floristic variation in tree species composition explained by land use variables was 33.2 % in 1980 and 30.8 % in 1992, while abiotic variables accounted for 31.2 %. Part of the 17 % of the floristic variance explained is related to the surrounding land use. Thus, when the land use of the sampled plots and the surrounding land use are considered simultaneously, up to 36.9 % of the species variation may be explained. Partial CCA enabled us to quantify the respective proportion of floristic variance which could be explained by land use (36.9 %), abiotic variables alone (20.2 %), shared variance (12.0 %) and unexplained variance (31.2 %). Our results indicated that a delayed effect of variation in land use on plant populations may exist. This delay may result either from population characteristics or from inadequate land use assessment. This study indicates the need for simultaneously examining land use and abiotic patterns in ecological studies, as many Mediterranean-type ecosystems have been shaped by these patterns.     

Interactions of biotic and abiotic environmental factors in an ectomycorrhizal symbiosis,and the potential for selection mosaics

Background  

Geographic selection mosaics, in which species exert different evolutionary impacts on each other in different environments, may drive diversification in coevolving species. We studied the potential for geographic selection mosaics in plant-mycorrhizal interactions by testing whether the interaction between bishop pine (Pinus muricata D. Don) and one of its common ectomycorrhizal fungi (Rhizopogon occidentalis Zeller and Dodge) varies in outcome, when different combinations of plant and fungal genotypes are tested under a range of different abiotic and biotic conditions.