根际效应对大豆田土壤线虫群落组成及多样性的影响

根际作为重要的环境界面是植物与环境之间物质能量交换的场所,关于根际效应的研究已成为土壤生态学的新兴热点领域,然而有关大豆根际效应对土壤动物多样性影响的研究报道并不多见。在三江平原选择连续耕作15a的大豆田,对大豆根际区与非根际区土壤线虫群落结构组成进行了对比分析。结果表明:大豆根际区土壤线虫总数、辛普森多样性指数(Dom)显著高于非根际区,根际区的物种数(S)、物种丰富度指数(SR)显著低于非根际区。说明大豆根际效应增加土壤线虫的丰度,但降低了线虫群落结构的复杂性。大豆根际区植物寄生线虫(PP)、食真菌线虫(FF)和食细菌线虫(BF)数量显著高于非根际区,而PP类群的比例在根际区却显著低于非根际区。这一研究结果表明食微线虫(FF和BF)类群在大豆根际区的比例增加更显著。食真菌与食细菌线虫数量比值(F/B)指示大豆根际区细菌生物量相对高于真菌生物量。研究结果丰富了农田土壤线虫多样性的研究内容,并为我国东北大豆田线虫病害的防治及定制相应的农业管理措施提供参考。     

Etiology of crop growth variability in groundnut in Niger

Six field trials were conducted during the rainy seasons in 1987 and 1988 and dry season of 1988 at ICRISAT Sahelian Center, Niger, to investigate the effects of soil applied nematicides, inorganic fertilizers and farm yard manure (FYM) on spacial variability of groundnut growth and yield. Soil samples from the rhizosphere and geocarposphere zones of the stunted plants showed high numbers of plant-parasitic nematodes (Scutellonema clathricaudatum, Telotylenchus indicus andXiphinema parasetariae). Carbofuran alone at a rate of 10 kg a.i. ha^-1 or in combination with FYM greatly reduced the population densities of plant-parasitic nematodes in the soil and roots as well as increased pod and haulm yields. Dibromochloropropane (DBCP) was most effective in reducing the variation in crop growth and significantly increased pod and haulm yields. No significant difference in crop growth, haulm and pod yields was observed between solarized and non-solarized plots.ICRISAT journal article no 1220.     

Inoculum Density and Population Dynamics of Suppressive and PathogenicStreptomycesStrains and Their Relationship to Biological Control of Potato Scab

SeveralStreptomycesstrains are capable of suppressing potato scab caused byStreptomyces scabies.Although these strains have been successful in the biocontrol of potato scab in the field, little is known about how populations of pathogenicStreptomycesin the potato rhizosphere are influenced by inoculation of the suppressive strains. The effects of inoculum densities of pathogenic and suppressiveStreptomycesstrains on their respective populations on roots and in rhizosphere soil were examined during the growing season. The relationships between inoculum density or rhizosphere population densities and disease severity were also investigated. Populations of suppressiveStreptomycesstrain 93 increased significantly on roots with increasing inoculum dose. At its highest inoculum dose, the suppressive strain reached a population density greater than 10⁶CFU/g root 14 weeks after planting. The ability of the suppressive strain to increase its populations with increasing inoculum density was hindered at high inoculum doses of the pathogen, suggesting that density-dependent competitive interactions may be occurring between the two antagonists. Strain 93 was most effective at preventing scab early in the growing season (8 weeks after planting), when tubers were most susceptible to the scab disease. Population densities of the suppressive strain in soil were more highly negatively correlated with scab severity than were populations on roots, suggesting that rhizosphere soil rather than potato roots may be the primary source of inoculum of the suppressive strain for tubers.     

Distribution of Field Corn Roots and Parasitic Nematodes in Subsoiled and Nonsubsoiled Soil

A field trial was conducted for 2 years in an Arredondo fine sand containing a tillage pan at 15-20 cm deep to determine the influence of subsoiling on the distribution of corn roots and plant-parasitic nematodes. Soil samples were taken at various depths and row positions at 30, 60, and 90 days after planting in field corn subsoiled under the row with two chisels and in non-subsoiled corn. At 30 and 60 days, in-row nematode population densities to 60 cm deep were not affected by subsoiling compared with population densities in nonsubsoiled plots. After 90 days, subsoiling had not affected total root length or root weight at the 20 depth-row position sampling combinations, but population densities of Meloidogyne incognita and Criconemella spp. had increased in subsoiled corn. Numbers of Pratylenchus zeae were not affected. Subsoiling generally resulted in a change in distribution of corn roots and nematodes in the soil profile but caused little total increase in either roots or numbers of nematodes. Corn yield was increased by subsoiling.     

Population dynamics of some plant–parasitic nematodes associated with banana cvs. Williams and Hindi in relation to soil temperature in Egypt

The seasonal fluctuations of nematodes associated with the rhizosphere of both banana cvs. Williams and Hindi throughout one year indicated a fairly negative correlation between the prevailing soil temperatures and the population densities of Criconemoides spp., Helicotylenchus exallus, Hoplolaimus spp. and Meloidogyne incognita.     

Comparative identification by fatty acid analysis of soil,rhizosphere, and geocarposphere bacteria of peanut (Arachis hypogaea L.)

Bacterial isolates were collected from the geocarposphere, rhizosphere, and root-free soil of field grown peanut (Arachis hypogaea L.) at three sample dates, and the isolates were identified by analysis of fatty acid methyl-esters to determine if qualitative differences exist among the bacterial microflora of these zones. Five bacterial genera were associated with isolates from soil, while pod and root isolates constituted 16 and 13 genera, respectively, indicating that bacterial diversity was higher in the rhizosphere and geocarposphere than in soil. The dominant (most frequently identified) genus across all three samples dates was Flavobacterium, for pods, Pseudomonas for roots, and Bacillus, for root-free soil. Sixteen bacterial taxa were only isolated from the geocarposphere, 7 only from the rhizosphere, and 5 only from soil. These results show that specific bacterial taxa are preferentially adapted to colonization of the geocarposphere and suggest that the soil, rhizosphere, and geocarposphere constitute three distinct ecological niches. Bacteria which colonize the geocarposphere should be examined as potential biological control agents for pod-invading fungi such as the toxigenic strains of Aspergillus flavus and A. parasiticus.     

Nematode Community Structure in a Vineyard Soil

Distribution of the nematode community in a California vineyard was studied over a 13-month period. Omnivorous and microbivorous nematodes were similarly distributed in the root zone, with greatest densities occurring between vine rows and near the soil surface. Greatest densities of plant-parasitic nematodes were found in the vine row, with the individual species differing in their vertical distribution. Total nematode biomass was greatest between rows near the surface. Biomass of plant parasites was greatest in the upper 30 cm of soil in the row, whereas biomass of microbivores was greatest in this region between rows. Of the plant-parasitic nematodes, the variability in distribution among vines was greatest for Paratylenchus hamatus and least for Meloidogyne spp.     

Determining Consistency of Spatial Dispersion of Nematodes in Small Plots

Nematode population densities in field plots were estimated by collecting samples consisting of 12 soil cores. Plots encompassed a variety of plant hosts and sampling dates, and provided data on the population densities of seven species of plant-parasitic nematodes. Three separate samples were collected per plot on each sampling date to obtain estimates of the mean and variance of numbers for each species. For each nematode species, these estimates were used to derive the Taylor''s Power Law regression over plots having identical hosts and sampling dates. For some nematode species, comparisons of regression equations among different sampling dates on the same host revealed similarities in values of a and b from Taylor''s Power Law. Parameters of Taylor''s Power Law relationships were used to develop sampling plans and to obtain estimates of sample precision. Precision estimates from specific and general sampling plans are illustrated for Belonolaimus longicaudatus.     

Quantification of the geocarposphere and rhizosphere effect of peanut (Arachis hypogaea L.)

Roots and pods of field-grown peanut (groundnut) (Arachis hypogaea L.) were sampled at the R3, R5, and R7 developmental stages and examined in comparison to root- and pod-free soil for microbial population densities to assess the geocarposphere and rhizosphere effects. G/ S (no. geocarposphere microorganisms/no. soil microorganisms) and R/S (no. rhizosphere microorganisms/no. soil microorganisms) ratios were calculated for total fungi,Asperigillus flavus, spore-forming bacilli, coryneform bacteria, fluorescent pseudomonads, and total bacteria isolated on low- and high-nutrient media. A clear geocarposphere effect was evidenced by increased population densities of bacteria and fungi associated with developing pods compared to soil. G/S and R/S ratios were generally greater than 1.0 for all groups of microorganisms except bacilli. G/S ratios were greater for total bacteria than for total fungi at two of the three sample times, suggesting that bacteria were stimulated more than fungi in the zone around developing pods. In contrast, R/S ratios, were higher for total fungi than for total bacteria at two of three sample times. The preferential association of fungi and bacteria with early developmental stages of the pod indicates that some microorganisms are particularly well adapted for colonization of the peanut geocarposphere. These microorganisms are logical candidates for evaluation as biological control candiates forA. flavus.     

General microflora,arbuscular mycorrhizal colonization and occurrence of endophytes in the rhizosphere of two age groups of <Emphasis Type="Italic">Ginkgo biloba</Emphasis> L.of Indian Central Himalaya

The populations of the general microflora (bacteria, actinomycetes and fungi) in the rhizosphere and their corresponding non-rhizosphere soil samples of Ginkgo biloba L. of two age groups (Group A, <25 years-young trees; Group B, >60 years-old trees) growing under a temperate location of Indian Himalayan Region (IHR) have been determined. Observations were also made for the diversity, distribution and colonization of arbuscular mycorrhizal (AM) fungi and occurrence of endophytes in roots of G. biloba. The population of general microflora was found to be higher in the rhizosphere of Group B trees, more clearly reflected in terms of rhizosphere: soil (R:S) ratios. Contrary to this, per cent colonization and spore densities of AM fungi were higher in the rhizosphere of Group A trees as compared to the rhizosphere of Group B. AM fungal colonization was observed mostly in form of loose coils. All the spores detected, belonged to the genus Glomus with five different types. Presence of endophytes (both bacteria and fungi) was observed in the cortical cells of G. biloba roots, more profound in case of Group B trees. Data suggest that, while the species of Glomus dominated the rhizosphere of G. biloba, an inverse correlation exist between the colonization of general microflora and the colonization of AM fungi including endophytes.     

Root-colonization ability of antagonistic Streptomyces griseoviridis

Root-colonization ability of Streptomyces griseoviridis was tested on turnip rape (Brassica rapa subsp. oleifera) and carrot (Daucus carota) by the plate test and the sand-tube method. In the plate test, colonized root length of total root length was highly significantly greater for turnip rape roots (72%) from those for carrot roots (1%). In the sand-tube method, root-colonization ability was examined in nonsterile soil, and no water was added after sowing. Seeds were treated with spores of S. griseoviridis or the biofungicide Mycostop. Roots were cut into 2-cm segments, and the root segments and the rhizosphere soil were studied separately. Root-colonization frequencies and population densities of the microbe in the rhizosphere soil indicated that S. griseoviridis successfully colonized turnip rape but weakly colonized carrot. Root-colonization of turnip rape is accounted for as proliferation of S. griseoviridis in the rhizosphere of turnip rape seedlings and is not due to the movement of microbe through the rhizosphere by water infiltration.     

Effect of Tillage and Water Management on the Population Behaviour of Root-Knot Nematodes Meloidogyne Triticoryzae in Rice Crop

The effects of puddling and water regimes on hydraulic conductivity (cm/day) of soil and on bulk density (mg/m 3 ) during rice culture, soil physical characteristics of the experimental field population densities of plant-parasitic nematodes have been studied. Puddling reduced the bulk density of soil and decreased the hydraulic conductivity in the upper layers but not in the deeper layers of soil aeration was reduced due to high moisture levels retained in the puddled soil. Population density of M. triticoryzae declined in puddled soil. The invasion of the roots by the second-generation infective juveniles was reduced. The population density of the root-knot nematodes was higher in the non-puddled soil especially in unsubmerged condition compared to puddled and submerged soil. However, if the seedlings were already infected before transplanting and submergence, the nematode could survive well and reproduce within the aerenchyma of the root.     

Soil redox-pH stability of arsenic species and its influence on arsenic uptake by rice

Although the auger method has been reported to be simple and superior to other methods of determination of roots, a standard procedure of determining roots with the same is lacking. In a bid to standardize the auger method for studying wheat root distribution; we sampled roots with 5, 7.5 and 10 cm ID augers on the row and midway between rows down to 180 cm. The suitability of a sampling scheme was adjudged from bias between observed and actual root length densities (RLD). The actual density in a layer was obtained by integrating the equation fitted to the average of root density data horizontally between 0 and 11 cm, because for 22 cm apart rows of wheat the representative half of the unit soil strip was 11 cm from the row; and assumed actual RLD was the average of horizontal distribution of RLD in a particular layer. Single site sampling on the row or between rows gave the maximum bias. Average of two sites viz. on the row and midway between rows with 10 cm ID auger and 7.5 cm ID auger or at three sites with 5 cm ID auger (additional site midway between the earlier two) gave the best estimates in that order.     

Distribution of Pratylenchus scribneri between Root and Soil Habitats

The abundance of Pratylenchus scribneri in soil and root habitats was compared in potato and corn plots during 1986-88. Nematodes were extracted from 100-cm³ soil samples and the roots contained within the samples. The percentage of the population recovered from soil, similar among years and crops, averaged ca. 50% at the beginning and end of the growing season and ca. 20% from early to late season. Proportionately more adults and fourth-stage juveniles than younger stages were located outside roots until harvest. In a related study, nematodes were isolated from the roots, root surfaces, and soil associated with roots of whole corn and potato plants sampled from the field. Nematode population estimates calculated from the whole plant samples were generally lower than those based on soil cores, but showed similar patterns of population growth. Nematode density per gram dry weight was highest in roots, intermediate on root surfaces, and lowest in soil. Estimates of the absolute abundance of nematodes in each of the three habitats were highest in roots or soil, depending on the sampling date, and lowest on root surfaces. This study demonstrates that P. scribneri inhabits soil environments even when host roots are present and illustrates the importance of considering all possible habitats when estimating the size of Pratylenchus spp. populations.     

The relationship between soil pH and population level of Pratylenchus loosi in tea plantations of Iran

Tea root lesion nematode, Pratylenchus loosi, is one of the most important crop pests in Iran, which causes loss in quantity and quality of tea. This study was carried out to identify the relationship between soil pH and population level of P. loosi. One hundred and eighty-three soil and root samples were taken randomly from all of the tea plantations in Iran. The nematodes were extracted from root samples with Coolen and d’Herd methods and from soil samples by sieving and centrifugation. Soil pH was measured by two methods: 1:1 dilution of soil:deionised water and 1:1 dilution of soil:dilute calcium chloride 0.01?M (Cacl₂) solution. Range of mean population of P. loosi per gram of root was 0.66–884 and per 100?g of soil was 1–186 in all samples. The highest population of P. loosi was observed at pH 3.5–4.5 as if 71.33% of infested samples were observed at soil pH 3.5–4.5. The results of regression analyses showed that at pH ranges between 3.5 and 4.5, there is a correlation (P???0.05) between soil pH and mean population of nematode per gram of feeder roots. This study demonstrated that the population density and damage potential of this nematode likely increases at pH?<?4.5.     

Comparative study on the host susceptibility of different banana cultivars to plant parasitic nematodes in Malappuram district of Kerala,India

Six cultivars of banana grown widely in Malappuram district of Kerala were evaluated for the diversity of plant parasitic nematodes in their respective rhizosphere. The genotypes evaluated include Nendran, Poovan (Mysore), Njali poovan, Mysore poovan, Chenkadali and Ponnan. The study aims on a comparative analysis of rhizosphere of different banana varieties for the occurrence of plant parasitic nematodes, diversity, frequency of occurrence and to determine the most vulnerable type of banana variety. Cobb’s decanting and sieving method was used to isolate nematodes from soil. Thirty three samples randomly collected from different blocks of Malappuram district are subjected to analysis and a ten species of nematodes were reported. Among the six varieties analysed both Nendran and Mysore Poovan variety seems to be more susceptible to phytoparasitic nematodes. With respect to eight blocks of Malappuram district, Helicotylenchus sp. shows highest prominence value followed by Radopholus similis, reniform nematode and Meloidogyne incognita.     

Nematode-enhanced microbial colonization of the wheat rhizosphere

The mechanisms by which seed-applied bacteria colonize the rhizosphere in the absence of percolating water are poorly understood. Without mass flow, transport of bacteria by growing roots or soil animals, particularly nematodes may be important. We used a sand-based microcosm system to investigate the ability of three species of nematodes (Caenorhabditis elegans, Acrobeloides thornei and a Cruznema sp.) to promote rhizosphere colonization by four strains of beneficial rhizobacteria. In nearly all cases, rhizosphere colonization was substantially increased by the presence of nematodes, irrespective of bacterial or nematode species. Our results suggest that nematodes are important vectors for bacteria rhizosphere colonization in the absence of percolating water.     

Phosphate-solubilizing peanut associated bacteria: screening for plant growth-promoting activities

Carbon and nitrogen are supplied by a variety of sources in the desert food web; both vascular and non-vascular plants and cyanobacteria supply carbon, and cyanobacteria and plant-associated rhizosphere bacteria are sources of biological nitrogen fixation. The objective of this study was to compare the relative influence of vascular plants and biological soil crusts on desert soil nematode and protozoan abundance and community composition. In the first experiment, biological soil crusts were removed by physical trampling. Treatments with crust removed had fewer nematodes and a greater relative ratio of bacterivores to microphytophages than treatments with intact crust. However, protozoa composition was similar with or without the presence of crusts. In a second experiment, nematode community composition was characterized along a spatial gradient away from stems of grasses or shrubs. Although nematodes generally occurred in increasing abundance nearer to plant stems, some genera (such as the enrichment-type Panagrolaimus) increased disproportionately more than others (such as the stress-tolerant Acromoldavicus). We propose that the impact of biological soil crusts and desert plants on soil microfauna, as reflected in the community composition of microbivorous nematodes, is a combination of carbon input, microclimate amelioration, and altered soil hydrology.     

Effect of Compost and Manure Soil Amendments on Nematodes and on Yields of Potato and Barley: A 7-Year Study

A 7-year study located in Prince Edward Island, Canada, examined the influence of compost and manure on crop yield and nematode populations. The compost used in this study consisted of cull waste potatoes, sawdust, and beef manure in a 3:3:1 ratio, respectively. No plant-parasitic nematodes were detected in samples collected from windrow compost piles at 5- and 30-cm depths prior to application on field plots. Low population densities of bacterial-feeding nematodes were recovered from compost windrows at the 5-cm depth. Field plots of potato (Solanum tuberosum cv. Kennebec) received compost applied at 16 metric tonnes per hectare, or beef manure applied at 12 metric tonnes per hectare. An adjacent trial with barley (Hordeum vulgare cv. Mic Mac) received only the compost treatment. In both trials the experimental design was a complete randomized block with four replicates. Data averaged over seven growing seasons indicated that population levels of root-lesion nematodes (primarily Pratylenchus penetrans) were higher in root-zone soil in potato plots treated with either compost or manure compared to the untreated control plots. The soil amendments did not affect root-knot nematode (Meloidogyne hapla) population densities in the potato plots, but clover-cyst nematodes (Heterodera trifolii) were more numerous in the root-zone soils of barley treated with compost compared to the untreated plots. Numbers of bacterial-feeding nematodes (primarily Diplogaster lheritieri) were greater in soil in potato plots treated with manure and in soil around barley roots than in untreated plots. Total yields of potato tubers averaged over seven growing seasons increased by 27% in the plots treated with either compost or manure. Grain yields of barley also were increased by 12% when compost was applied. These results indicated that organic amendments increased crop yields, but the impacts on different nematode species varied and usually increased soil population levels.     

Population dynamics of the rice root nematode Hirschmanniella oryzae on monsoon rice in Myanmar

Soil and root samples of the short crop cycle duration rice variety Yadanartoe were collected at 10-days intervals, starting at 20 days after transplanting until 20 days after harvest, from September 2008 until January 2009, to study the population dynamics of Hirschmanniella oryzae on (rainfed) monsoon rice. Plant growth stages, the ambient air and soil temperature, rainfall and relative humidity during the sampling period were noted. The soil type is clay and has a pH of 5.1. In the roots, three nematode population density peaks were observed during the sampling period: at the maximum tillering stage, at the milky grain stage, and between harvest and 10 days after harvest. The highest peak (483 H. oryzae/g roots) was observed at the milky grain stage. The lowest root population density (46 H. oryzae/g roots) was found at harvesting. Population densities in the soil followed more or less the same trend as in the roots. After harvesting, the soil population density increased. During our observation, we did not find any effects of environmental conditions on the population densities of H. oryzae. However, it was found that the population dynamics of H. oryzae were influenced by the plant growth stage.