大豆油份含量QTL的定位

以大豆杂交组合皖82-178×通山薄皮黄豆甲衍生的重组自交系群体(RIL)为材料, 以该群体所构建的遗传连锁图谱为基础, 以2004和2005年油份含量为指标, 利用软件Cartgrapher(V. 2.0)采用复合区间作图法进行了QTL分析, 结果表明, 利用两年资料对油份含量QTL的定位结果基本一致。两年资料所检测到的QTL均位于wt-11连锁群的satt331附近, 分别可以解释13.95%和15.01%遗传变异。此外, 利用软件QTL Mapper 1.6, 采用复合区间作图法直接对两年的油份含量进行QTL联合分析, 结果表明, 控制油份的QTL也位于wt-11连锁群的satt331附近。     

From QTLs for enzyme activity to candidate genes in maize

In order to facilitate the search for genes underlying QTLs (Quantitative Trait Loci), the activities of key enzymes of the carbohydrate metabolism in maize, and the concentration of their substrates or products were used as quantitative traits. For each of the chosen enzyme, i.e. ADPglucose pyrophosphorylase, sucrose-phosphate-synthase and invertases, the corresponding cDNA was available. Since biochemical traits are more closely related to gene expression than agronomic traits, co-locations could be expected between an enzyme structural gene and a QTL for its enzyme activity, and/or the corresponding product or substrate content. This approach was applied using recombinant inbred lines on leaves at 3- or 4-leaf stage, under control and water stress conditions and on grain, at maturity. Several QTLs were detected for each trait, particularly for two enzyme activities measured in mature leaves. Apparent co-locations between QTL for activity and structural locus were observed for sucrose-phosphate-synthase (chromosome 8) and acid-soluble invertase (chromosome 2 and 5). Leaf acid-soluble (vacuolar) invertase provided an interesting case since QTL, on chromosome 5, explaining 17% of variability was apparently co-located with the Ivr2 gene encoding a vacuolar invertase protein which was strongly water-stress inducible. Similarly, in grain, an amylose QTL co-located with the Sh2 gene of ADPglucose pyrophosphorylase. The reliability of this candidate was further tested through the examination of Sh2 DNA polymorphism in 46 genetically unrelated lines. A correlation was obtained between this polymorphism and kernel starch content, which further validated Sh2 as a candidate. Some improvements or alternatives to this strategy are briefly discussed.      

Tests for resistance to white clover mosaic virus in red and white clover

A range of red and white clover cultivars was tested for immunity to white clover mosaic virus. All plants became infected although some showed no symptoms. Enzyme-linked immunosorbent assay (ELISA) and immunosorbent electron microscopy (ISEM) revealed significant differences in virus concentration between red clover cultivars and between clones of white clover artificially infected with the virus. These differences could not, however, be related to relative yield losses.     

Cellulase in red clover exudates

Summary Cellulase was detected in the medium when red clover (Trifolium pratense) seedlings were grown aseptically in flasks. The amount of cellulase found depended on the ionic composition and pH of the medium. Cellulase was found when plants were grown in distilled water. With added salts the amount of cellulase detected was negligible at pH 5.5 or less, but increased with increasing pH; less was released when seedlings were grown throughout in the presence of CaCl₂. The enzyme may be extracytoplasmic, located on the root surface, and released by changes in the salt content and pH of the medium.Enzyme preparations contained at least two components. At pH 3.5 and 20°C one was stable for at least 22 h, whereas the other was destroyed within 0.5 h. The reaction rate of enzyme preparations was almost constant from pH 5 to 7.     

Antioxidant response to drought in red and white clover

Antioxidant response to drought in red (Trifolium pratense L., cv. ??Start??) and white clover (Trifolium repens L, cv. ??Haifa?? and cv. ??Debut??) grown as soil cultures was evaluated in water-deprived and recovered plants. Drought provoked oxidative stress in leaves confirmed by the considerable changes in electrolyte leakage, malondialdehyde, hydrogen peroxides and proline contents. Immunoblot of ??-1-pyrroline-5-carboxylate synthetase (P5CS), which catalyzes the first two steps in proline biosynthesis, revealed strong induction of the enzyme in red clover plants submitted to drought. Water-deprived white clover plants exhibited distinct P5CS profiles. This was related to different drought tolerance of the studied T. repens cultivars. Isoenzyme analyses of superoxide dismutase (SOD), peroxidase (POX) and catalase (CAT) demonstrated certain differences in antioxidant defence among the tested varieties. It was confirmed that MnSOD (in both T. repens and T pratense) and FeSOD (in T. repens) isoforms were the most affected by drought. The red clover cultivar ??Start?? exhibited the lowest FeSOD and POX activities which could contribute to its poor performance under water deprivation.     

Bacteriophage in relation to nitrogen fixation by red clover

Summary Cultures of Rhizobium trifolii resistant to the action of a given bacteriophage, may vary appreciably in their nitrogen fixing ability in association with the proper host plant. Likewise, cultures of Rh. trifolii, sensitive to bacteriophage may or may not benefit the host plant as judged by nitrogen fixation.Since sensitive and resistant cultures may be comparable in their nitrogen fixing capacity, it appears that the behavior of a culture of Rh. trifolii toward the lytic action of a specific bacteriophage in vitro cannot be correlated with its nitrogen fixing ability in association with the host plant.If a bacteriophage is added to a sensitive strain of Rh. trifolii used for inoculation of red clover, the cultures recovered from the nudules are often only of the resistant type. When this occurs the nitrogen fixed through association of plant and bacteria is decreased in the case of a good strain, but is unaffected if the strain is of the poor type. The addition of phage to a resistant strain of Rh. trifolii used for inoculation of red clover plants does not change the resistant type of culture recovered from the nodules, nor is the fixation of nitrogen by plant and bacteria affected.     

Adaptation of red clover rhizobia to low temperatures

Summary Red clover Rhizobium strains, isolated from different locations between latitudes 60° and 63°30′ N in Finland, were tested for their adaptation to low temperatures. 31 strains were tested for growth at 5°C, 10°C, 15°C and 18°C in pure culture. No strain grew at 5°C. At the other temperatures there were differences between the strains, but the same strains grew fast at all temperatures. Ten strains were investigated for nodulation and acetylene reduction in phytotrons in two different climates, one simulating the growing season in southern and the other in northern Finland. There were differences between the strains in their ability to nodulate their host plant, and northern strains showed higher nitrogenase activity than southern strains in the cold climate.     

Resistance of red and white clover cultivars to clover rot (Sclerotinla trifoliorum)

Various techniques for assessing the resistance of clover cultivars to clover rot have been investigated, including counting sclerotia around infected plants, measuring lengths of healthy and diseased rows and the use of a key to assess symptom expression on individual plants. The latter was found to be the most suitable under field conditions. Of fifty-one red clover cultivars tested, nineteen were found to possess some level of resistance. Clover rot appears to be an increasing problem with white clover crops but tests have indicated that resistant cultivars are available.     

The occurrence and effects of red clover necrotic mosaic virus in red clover (Trffbliumpratense)

In 1976, red clover necrotic mosaic virus (RCNMV) was identified in red clover variety trials at the Scottish Colleges of Agriculture and at the trial centres of the National Institute of Agricultural Botany (NIAB) in Northumberland, Dyfed, Devon and Cambridge. In 1977, RCNMV was also found in two commercial crops of red clover in South Wales. The only previous finding of this virus in Britain was in 1971.
In red clover leaves RCNMV causes veinal chlorosis, often followed by severe necrosis and deformation; the plants become stunted. All cultivars tested were infected either in field or glasshouse experiments and three of the four most susceptible cultivars were tetraploids. Yield losses in cv. Hungaropoly averaged 57% over three cuts. RCNMV was transmitted manually but not through seed or by aphids {Acyrthosiphon pisum and Myzus persicae) or weevils (Apion spp. and Sitona lineatus). Seedlings became infected when grown in pots containing RCNMV-infected plants or soil from infected sites, and the roots of infected test seedlings contained an Olpidium sp. which may be the vector.
White clover mosaic virus (WCMV), also common in red clover at some sites, was less damaging than RCNMV and in a glasshouse experiment decreased yield by only 22%. An unidentified seed-borne virus with spherical particles c. 33 nm in diameter was the only virus detected in clover seedlings screened for RCNMV.     

Mapping of QTLs conferring resistance to bacterial leaf streak in rice

A large F₂ and a RI population were separately derived from a cross between two indica rice varieties, one of which was highly resistant to bacterial leaf streak (BLS) and the other highly susceptible. Following artificial inoculation of the RI population and over 2 years of testing, 11 QTLs were mapped by composite interval mapping (CIM) on six chromosomes. Six of the QTLs were detected in both seasons. Eight of the QTLs were significant following stepwise regression analysis, and of these, 5 with the largest effects were significant in both seasons. The detected QTLs explained 84.6% of the genetic variation in 1997. Bulked segregant analysis (BSA) of the extremes of the F₂ population identified 3 QTLs of large effect. The 3 QTLs were dentical to 3 of the 5 largest QTLs detected by CIM. The independent detection of the same QTLs using two methods of analysis in separate mapping populations verifies the existence of the QTLs for BLS and provides markers to ease their introduction into elite varieties. Received: 13 October 1999 / Accepted: 29 October 1999     

Genotype-dependent whole plant regeneration from protoplasts of red clover (Trifolium pratense L.)

Protoplasts are useful for subcellular studies, in vitro selection, somatic hybridization and transformation. Whole plant regeneration from protoplasts is a prerequisite to producing altered crop plants using these methods. Whole plant regeneration was achieved from leaf- and suspension culture-derived protoplasts of T. pratense. Regeneration was most dependent upon identifying genotypes with genetic capacity to regenerate. Additional factors that were used to select genotypes, but which proved to be less important, were a high rate of cell growth in culture and a high plating efficiency of protoplasts. One genotype was identified which had a regeneration response equivalent to that of T. rubens and which regenerated from both leaf- and suspension culture-derived protoplasts.Research supported by USDA/CRGO Grant No. 81 CRCR-1-0613     

Mapping QTLs for alpha-amylase activity in rye grain

Genetic control of alpha-amylase activity in rye grain was investigated by QTL mapping based on DS2 x RXL10 intercross consisting of 99 F5-6 families propagated at one location during four vegetation seasons. A wide range of variation in alpha-amylase activity and transgression effects were found among families and parental lines. This variation was shown to be determined in 40.1% by 7 significant (LOD score not less than 2.5) and 2 putative QTLs (2 < LOD < 2.5) distributed on all rye chromosomes except 4R. Two significant QTLs located on 3RL and 5RL chromosome arms were expressed each year. The third significant QTL was detected in three years (1RL). The other four significant QTLs (2RL, 5RS, 6RL, 7RL) were found in one year of study. The number and composition of QTLs were specific for a given year varying from three to six. QTLs were not correlated with isoenzyme polymorphisms at the structural alpha-Amy1 loci. A QTL associated with a region containing the alpha-Amy3 locus was detected on chromosome 5RL. Both high- and low-activity QTL alleles were found in each parental line, which explains the appearance of transgressive recombinants in the segregating population.     

水稻叶绿素含量的QTL定位

利用由两个籼稻品种Acc8558和H359杂交构建的一个包含131个株系(F19)的重组自交系群体,及其相应的包含147个RFLP和78个AFLP标记的遗传图谱,采用多性状复合区间定位方法,对控制水稻叶绿素含量的QTL进行了定位分析。对叶绿素a和叶绿素b含量各检测到6个QTL,其中5个QTL在两性状问是相同的。这些QTL主要分布在第1和第4染色体上,因此这两条染色体对叶绿素含量是重要的。QTL qChlAlc／qChlBlb(二者位置相同)在4个观测时期均表现较大效应,且在最后的剑叶期贡献最大,因此对叶绿素含量最为重要。另两个QTL(qCh-LA4a／qChlB4a和qChlA4b／qChlB4b)只在第2次观测时期效应显著,表明它们只在特定发育阶段发挥作用。     

Mapping QTLs and candidate genes for rice root traits under different water-supply conditions and comparative analysis across three populations

To investigate the genetic factors underlying constitutive and adaptive morphological traits of roots under different water-supply conditions, a recombinant inbred line (RIL) population derived from a cross between the lowland rice variety IR1552 and the upland rice variety Azucena with 249 molecular markers, was used in cylindrical-pot experiments. Eighteen QTLs were detected for seminal root length (SRL), adventitious root number (ARN), and lateral root length (LRL) and lateral root number (LRN) on the seminal root at a soil depth of from 3 to 6 cm under flooding and upland conditions. One identical QTL was detected under both flooding and upland conditions. The relative parameters under the two water-supply conditions were also used for QTL analysis. Five QTLs for upland induced variations in the traits were detected with the positive alleles from Azucena. A comparative analysis was performed for the QTLs detected in this study and those reported from two other populations with Azucena as a parent. Several identical QTLs for root elongation were found across the three populations with positive alleles from Azucena. Candidate genes were screened from ESTs and cDNA-AFLP clones for comparative mapping with the detected QTLs. Two genes for cell expansion, OsEXP2 and endo-1,4--D-glucanase EGase, and four cDNA-AFLP clones from root tissues of Azucena, were mapped on the intervals carrying the QTLs for SRL and LRL under upland conditions, respectively.Communicated by H.C. Becker     

Selection for increased nitrogen fixation in red clover

Summary Plants were selected and bred from the modal yield class of the population and from the class showing the largest yield (and nitrogen content), under conditions of test-tube culture using a single strain of rhizobia as inoculum. Progeny tests made on about 60 crosses within each group over two generations showed larger yields in families raised from the most effective parent plants, but the average effect of selection was small (about 5% dry weight increase). When the same material was tested with other strains of bacteria the effect of selection was less, but did not entirely disappear. In these conditions, selection was partly for increased symbiotic nitrogen fixation and partly for tolerance of the restricted conditions of growth.     

Mapping of FHB resistance QTLs in tetraploid wheat.

Triticum turgidum L var. durum is known to be particularly susceptible to infection by Fusarium graminearum, the causal agent for Fusarium head blight (FHB), which results in severe yield losses and grain contaminated with mycotoxins. This research was aimed at identifying FHB resistance in tetraploid wheat and mapping the location of FHB resistance genes. A tetraploid cross of durum wheat ('Strongfield') x Triticum carthlicum ('Blackbird') was used to generate a doubled-haploid (DH) population. This population was evaluated for type II resistance to F. graminearum in replicated greenhouse trials, in which heads were innoculated and the percent of infected spikelets was determined 21 days later. The population was also genotyped with microsatellite markers to construct a map of 424 loci, covering 2 052 cM. The FHB reaction and genotypic data were used to identify FHB resistance quantitative trait loci (QTLs). It was determined that 2 intervals on chromosomes 2BL and 6BS controlled FHB resistance in this tetraploid cross. The FHB resistance allele on chromosome 2BL (r2=0.26, logarithm of odds (LOD)=8.5) was derived from 'Strongfield', and the FHB resistance allele on chromosome 6BS (r2=0.23, LOD=6.6) was derived from 'Blackbird'. Two other loci, on chromosomes 5AS and 2AL, were shown to regulate FHB infection and to have an epistatic effect on the FHB resistance QTL on chromosome 6BS. Further, the FHB resistance QTL peak on chromosome 6BS was clearly coincident with the known FHB resistance gene Fhb2, derived from Sumai 3. The results show that FHB resistance can be expressed in durum wheat, and that T. carthlicum and Triticum aestivum likely share a common FHB resistance gene on chromosome 6BS.     

Mapping QTLs associated with drought avoidance in upland rice

The identification of molecular markers linked to genes controlling drought resistance factors in rice is a necessary step to improve breeding efficiency for this complex trait. QTLs controlling drought avoidance mechanisms were analyzed in a doubled-haploid population of rice. Three trials with different drought stress intensities were carried out in two sites. Leaf rolling, leaf drying, relative water content of leaves and relative growth rate under water stress were measured on 105 doubled haploid lines in two trials and on a sub-sample of 85 lines in the third one. Using composite interval mapping with a LOD threshold of 2.5, the total number of QTLs detected in all trials combined was 11 for leaf rolling, 10 for leaf drying, 11 for relative water content and 10 for relative growth rate under stress. Some of these QTLs were common across traits. Among the eleven possible QTLs for leaf rolling, three QTLs (on chromosomes 1, 5 and 9) were common across the three trials and four additional QTLs (on chromosomes 3, 4 and 9) were common across two trials. One QTL on chromosome 4 for leaf drying and one QTL on chromosome 1 for relative water content were common across two trials while no common QTL was identified for relative growth rate under stress. Some of the QTLs detected for leaf rolling, leaf drying and relative water content mapped in the same places as QTLs controlling root morphology, which were identified in a previous study involving the same population. Some QTL identified here were also located similarly with other QTLs for leaf rolling as reported from other populations. This study may help to chose the best segments for introgression into rice varieties and improvement of their drought resistance.     

应用频数分布面积法定位家蚕QTL

利用生态型差异较大的两个家蚕品种７８２和ｏｄ１００作正反杂交,得到Ｆ１。让Ｆ１雄蚕与叠双隐性标记的ｏｄ１００回 到回交子代。