Genetic and cultural transmission in Sicily as revealed by names and surnames

The study of names as cultural characters and of surnames, which behave like genetic markers, is useful for comparing cultural and genetic transmission. Genetic transmission has a unique vertical component, which also can be present in the transmission of cultural traits associated with a horizontal (or epidemic) component resulting from local customs or fashion. Our aims in this study are to infer genetic patterns in Sicily from surnames and names and to evaluate and compare the consequences of vertical versus horizontal transmission of cultural markers. Names and surnames of 88,383 consanguineous spouses collected in 16 dioceses of Sicily were analyzed by multivariate analysis to reveal and compare the geographic clusters obtained from both sets of data. As a result, both data sets indicate a major separation between the eastern and the western region of Sicily. Also, distance matrices obtained from names are highly correlated with those from surnames. But names seem to form fewer and larger geographic clusters, whereas surnames are more greatly subdivided into smaller clusters. The most common male names present a different pattern from surnames. Vertical transmission is the cause of the similarity of the main geographic patterns of names and surnames and their correspondence with findings from geography of genes, and horizontal cultural transmission explains the major differences. Furthermore, the genetic and cultural affinities can be correlated with the historical background of Sicily.     

Cultural factor in the geographic distribution of personal names: pseudogenetic analysis of first names used to estimate the cultural component of coefficients of relationship by isonymy

By applying to given names formulations for analyzing the genetics of surname distributions, under certain assumptions one can separate the genetic components from the cultural components of surname distributions. Geographic distributions of surnames regularly yield larger coefficients of relationship or kinship within local populations than between them: for instance, Ri = 75 x 10(-5) within a local area in England but the Ri of those villages with all of England and Wales is 42 x 10(-5). On the contrary, the first names in an English and Welsh sample give essentially the same pseudocoefficient (based on first names) within registration districts (Ri = 354 x 10(-5) as between districts (Ri = 370 x 10(-5). Thus the decrease with distance of the coefficients based on surnames can be ascribed to the genetic component according to the Malécot principle, assuming that the first names are chosen in the same way as the surnames originated and consequently that the cultural component of surname distributions is no more localized than the distribution of given names (in this sample not at all).     

Russian genofond. Genogeography of surnames

Surnames are traditionally used in population genetics as "quasi-genetic" markers (i.e., analogs of genes) when studying the structure of the gene pool and the factors of its microevolution. In this study, spatial variation of Russian surnames was analyzed with the use of computer-based gene geography. Gene geography of surnames was demonstrated to be promising for population studies on the total Russian gene pool. Frequencies of surnames were studied in 64 sel'sovets (rural communities; a total of 33 thousand persons) of 52 raions (districts) of 22 oblasts (regions) of the European part of Russia. For each of 75 widespread surnames, an electronic map of its frequency was constructed. Summary maps of principal components were drawn based on all maps of individual surnames. The first 5 of 75 principal components accounted for half of the total variance, which indicates high resolving power of surnames. The map of the first principal component exhibits a trend directed from the northwestern to the eastern regions of the area studied. The trend of the second component was directed from the southwestern to the northern regions of the area studied, i.e., it was close to latitudinal. This trend almost coincided with the latitudinal trend of principal components for three sets of data (genetic, anthropological, and dermatoglyphical). Therefore, the latitudinal trend may be considered the main direction of variation of the Russian gene pool. The similarity between the main scenarios for the genetic and quasi-genetic markers demonstrates the effectiveness of the use of surnames for analysis of the Russian gene pool. In view of the dispute between R. Sokal and L.L. Cavalli-Sforza about the effects of false correlations, the maps of principal components of Russian surnames were constructed by two methods: through analysis of maps and through direct analysis of original data on the frequencies of surnames. An almost complete coincidence of these maps (correlation coefficient rho = 0.96) indicates that, taking into account the reliability of the data, the resultant maps of principal components have no errors of false correlations.     

The Russian Gene Pool: Gene Geography of Surnames

Surnames are traditionally used in population genetics as quasi-genetic markers (i.e., analogs of genes) when studying the structure of the gene pool and the factors of its microevolution. In this study, spatial variation of Russian surnames was analyzed with the use of computer-based gene geography. Gene geography of surnames was demonstrated to be promising for population studies on the total Russian gene pool. Frequencies of surnames were studied in 64 sel'sovets (rural communities; a total of 33 thousand persons) of 52 raions (districts) of 22 oblasts (regions) of the European part of Russia. For each of 75 widespread surnames, an electronic map of its frequency was constructed. Summary maps of principal components were drawn based on all maps of individual surnames. The first 5 of 75 principal components accounted for half of the total variance, which indicates high resolving power of surnames. The map of the first principal component exhibits a trend directed from the northwestern to the eastern regions of the area studied. The trend of the second component was directed from the southwestern to the northern regions of the area studied, i.e., it was close to latitudinal. This trend almost coincided with the latitudinal trend of principal components for three sets of data (genetic, anthropological, and dermatoglyphical). Therefore, the latitudinal trend may be considered the main direction of variation of the Russian gene pool. The similarity between the main scenarios for the genetic and quasi-genetic markers demonstrates the effectiveness of the use of surnames for analysis of the Russian gene pool. In view of the dispute between R. Sokal and L.L. Cavalli-Sforza about the effects of false correlations, the maps of principal components of Russian surnames were constructed by two methods: through analysis of maps and through direct analysis of original data on the frequencies of surnames. An almost complete coincidence of these maps (correlation coefficient = 0.96) indicates that, taking into account the reliability of the data, the resultant maps of principal components have no errors of false correlations.     

Relationships among given names in the Scilly Isles

The pseudo-genetic analysis of given names shows that, in the Scilly Isles, coefficients of relationship of first names are similar on St Mary's, the Outer Isles, and in the total sample of 5666 individuals married there in two and a half centuries. Comparable coefficients of relationship of a sample of 1658 given names in marriages in England and Wales in 1975 are considerably smaller, but similar within and between districts. The coefficients of relationship of given names on the Scilly Isles decreases during the 19th and especially the 20th centuries in parallel with decreases in random relationship from surnames. The genetic versus cultural-linguistic factors cannot be distinguished in the temporal variation in names, but the geographic differentiation virtually always reported in surnames is not present in these examples of given names and the geographic pattern in the surnames thus seems to result from the hereditary aspect of surnames. This result supports the validity of use of surnames in models of human genetic geography.     

New method for surname studies of ancient patrilineal population structures, and possible application to improvement of Y-chromosome sampling

Several studies showed that surnames are good markers to infer patrilineal genetic structures of populations, both on regional and microregional scales. As a case study, the spatial patterns of the 9,929 most common surnames of the Netherlands were analyzed by a clustering method called self-organizing maps (SOMs). The resulting clusters grouped surnames with a similar geographic distribution and origin. The analysis was shown to be in agreement with already known features of Dutch surnames, such as 1) the geographic distribution of some well-known locative suffixes, 2) historical census data, 3) the distribution of foreign surnames, and 4) polyphyletic surnames. Thus, these results validate the SOM clustering of surnames, and allow for the generalization of the technique. This method can be applied as a new strategy for a better Y-chromosome sampling design in retrospective population genetics studies, since the idenfication of surnames with a defined geographic origin enables the selection of the living descendants of those families settled, centuries ago, in a given area. In other words, it becomes possible to virtually sample the population as it was when surnames started to be in use. We show that, in a given location, the descendants of those individuals who inhabited the area at the time of origin of surnames can be as low as approximately 20%. This finding suggests 1) the major role played by recent migrations that are likely to have distorted or even defaced ancient genetic patterns, and 2) that standard-designed samplings can hardly portray a reliable picture of the ancient Y-chromosome variability of European populations.     

野生罗汉果种群分布格局研究

采用方差/均值比率法对8个野生罗汉果种群的分布格局类型进行了分析,同时采用负二项式参数、扩散性指数、丛生指数、平均拥挤度指数和聚块性指数等计测这些种群的空间聚集强度。结果表明,罗汉果种群的分布格局呈随机或集群分布,不同种群的聚集强度有所差异。对这种分布格局形成的原因进行了分析。     

塔里木河上游天然胡杨林种群空间分布格局与动态研究

以新疆塔里木河上游阿瓦提县天然胡杨林为研究对象,采用相邻格子法进行实地调查,应用方差/均值比率法和5种聚集度指标研究了塔里木河上游天然胡杨林主要种群的空间分布格局与动态特征.结果显示:胡杨群落中除草本西北天冬种群空间分布格局呈随机分布外,其它主要种群均呈聚集分布;拟合检验表明,胡杨、灰叶胡杨种群为聚集分布.种群空间分布动态分析表明,灰叶胡杨在小树、中树与大树阶段均为聚集分布;胡杨种群在小树与中树阶段为聚集分布,但聚集强度减弱,到大树阶段为随机分布.研究表明,物种分布格局主要与物种本身的生物生态学特性和生境有关.     

Autochthony and HLA frequencies in the Netherlands: when surnames are useless markers

To study the genetic variability of the HLA loci A, B, DR, and DQ in the Netherlands, we analyzed more than 13,000 typings provided by the Dutch National Reference Laboratory for Histocompatibility. To investigate any possibly existing population structure, we subdivided the typings by the geographic location of residency of donors and by the historical belonging of their surnames to given provinces. Concerning possible geographic patterns, we found no significant differences between the four provinces examined (North Holland, South Holland, Utrecht, Zeeland). To assess whether such a negative result was related to recent immigration to the area (the richest of the country) that erased possible preexisting patterns of HLA diversity, we reprocessed the database according to the surnames of HLA donors. We obtained two groups: (1) those having a surname typical of the four provinces they inhabit and (2) those with surnames coming from elsewhere. Such an analysis was made possible because of the availability of a database concerning the geographic origin of most Dutch surnames. Even with this surname-based approach, no major differences were found. We conclude that either the western part of the Netherlands was genetically homogeneous before the official introduction of Dutch surnames two centuries ago by Napoleon or surnames have no power in dissecting HLA variability; that is, such variability is the result of recombination phenomena that surnames cannot mirror because they are transmitted virtually unchanged generation after generation. A comparable study by other investigators recommended the use of family names to identify rare HLA haplotypes in France, but now, concerning the Netherlands, we find opposite results. We suggest that a few typing centers may be sufficient to type bone marrow donors, because HLA genetic differences between the different provinces of the Netherlands are extremely low. To maximize the number of donors, such centers should be located in areas providing the easiest access to the largest population of possible donors, thus disregarding the search for a local variability that we did not find.     

青海湖地区芨芨草群落主要种群分布格局研究

以青海省三角城种羊场地区典型的芨芨草草原为研究对象,采用相邻格子样方法取样,应用方差/均值比率法、负二项参数(K);扩散系数(C);C ass ie指标(CA);丛生指标(I)和聚块性指标(m*/m)等指标,比较了青海湖地区围栏内、外芨芨草群落主要种群的空间分布格局。结果表明,围栏内芨芨草群落优势种群的空间格局除多裂蒲公英为随机分布外,其余均为聚集分布;围栏外除西伯利亚蓼外,其余种群也全部为聚集分布,而且围栏外种群的聚集强度大于围栏内。物种的这种分布格局主要与物种本身的生态和生物学特性有关。     

Isonymic relationships in ethno-social categories (Argentinian colonial period) including illegitimate reproduction

Surnames provide a useful method to study the structure of human populations for which biological data are not available. The isonymic method has had multiple applications, but difficulties emerge when dealing with groups where extramarital reproduction is common and the sample size is small, and even more so when only paternal surnames are taken into account.Therefore, it could be of interest to retain female surnames, including those of unmarried mothers. This study was carried out using all birth records froman Argentinian population in the colonial period, which was characterized by the presence of different ethno-social groups (Spanish, Indian and 'Mestizo'or mixed Spanish-Indian) and various reproductive patterns regarding legitimacy. Coefficient of relationship by isonymy (Ri) kinship matrices between geographical populations were obtained, and the results derived from sets of surnames (paternal, maternal of legitimate and illegitimate children,and all surnames in the registers) compared. The results show similar surname distribution regardless of the set of surnames and group considered.Kinship Ri matrices using paternal surnames, maternal surnames of legitimate children, maternal surnames of illegitimate children, and the set of whole surnames showed the same relationships among populations, indicating a similar pattern for Spanish, Indian and Mixed ethno-social groups. Mantel test correlation between all pairs of matrices was significant in all different ethno-social groups. The results suggest that in populations with high illegitimacy, such as that studied here, it is possible to include maternal surnames, even corresponding to single mothers, in order to consider total reproduction and therefore maximize sample size.     

Spatial heterogeneity of daphniid parasitism within lakes

Spatially explicit models show that local interactions of hosts and parasites can strongly influence invasion and persistence of parasites and can create lasting spatial patchiness of parasite distributions. These predictions have been supported by experiments conducted in two-dimensional landscapes. Yet, three-dimensional systems, such as lakes, ponds, and oceans, have received comparatively little attention from epidemiologists. Freshwater zooplankton hosts often aggregate horizontally and vertically in lakes, potentially leading to local host–parasite interactions in one-, two-, or three-dimensions. To evaluate the potential spatial component of daphniid parasitism driven by these local interactions (patchiness), we surveyed vertical and horizontal heterogeneity of pelagic Daphnia infected with multiple microparasites in several north temperate lakes. These surveys uncovered little evidence for persistent vertical patchiness of parasitism, since the prevalence of two parasites showed little consistent trend with depth in four lakes (but more heterogeneity during day than at night). On a horizontal scale of tens of meters, we found little systematic evidence of strong aggregation and spatial patterning of daphniid hosts and parasites. Yet, we observed broad-scale, basin-wide patterns of parasite prevalence. These patterns suggest that nearshore offshore gradients, rather than local-scale interactions, could play a role in governing epidemiology of this open water host–parasite system. Electronic Supplementary Material Supplementary material is available for this article at     

GENETIC DRIFT AND COLLECTIVE DISPERSAL CAN RESULT IN CHAOTIC GENETIC PATCHINESS

Chaotic genetic patchiness denotes unexpected patterns of genetic differentiation that are observed at a fine scale and are not stable in time. These patterns have been described in marine species with free‐living larvae, but are unexpected because they occur at a scale below the dispersal range of pelagic larvae. At the scale where most larvae are immigrants, theory predicts spatially homogeneous, temporally stable genetic variation. Empirical studies have suggested that genetic drift interacts with complex dispersal patterns to create chaotic genetic patchiness. Here we use a coancestry model and individual‐based simulations to test this idea. We found that chaotic genetic patterns (qualified by global F_ST and spatio‐temporal variation in F_ST's between pairs of samples) arise from the combined effects of (1) genetic drift created by the small local effective population sizes of the sessile phase and variance in contribution among breeding groups and (2) collective dispersal of related individuals in the larval phase. Simulations show that patchiness levels qualitatively comparable to empirical results can be produced by a combination of strong variance in reproductive success and mild collective dispersal. These results call for empirical studies of the effective number of breeders producing larval cohorts, and population genetics at the larval stage.     

Pacing patterns in competitive rowing adopted in different race categories

Data from 7 World Rowing Championships between 2001 and 2009 were analyzed to determine the time distribution during 2,000-m heavyweight races (from 500-m quarter times) and to assess whether pacing patterns differ between boat classes (single vs. team boats) and qualifying rounds (heats vs. finals). Analyses of variance with repeated measures on quarter times revealed that pacing patterns in heat races were better described (i.e., higher amount of variance explained) by a linear trend line with a positive slope (women: η2 = 0.76, men: η2 = 0.68) but followed a quadratic trend line (parabolic-shaped pattern) during finals (women: η2 = 0.81, men: η2 = 0.60). Not using a spurt at the end of the heat races may indicate an attempt to conserve energy for subsequent rounds or reflect reduced effort made by losing crews or both aspects. In single boats, the pacing pattern was better represented by a linear trend line with a positive slope (women: η2 = 0.76, men: η2 = 0.68), but the amount of variance explained was virtually the same for both the linear and the quadratic trend component in team boats. The absence of a final spurt in single boat races suggests that the physiological status of the athlete plays an important role to control the timing and rate of decline in rowing speed.     

Spatial Analysis Based on Variance of Moving Window Averages

A new method for analysing spatial patterns was designed based on the variance of moving window averages (VMWA), which can be directly calculated in geographical information systems or a spreadsheet program (e.g. MS Excel). Different types of artificial data were generated to test the method. Regardless of data types, the VMWA method correctly determined the mean cluster sizes. This method was also employed to assess spatial patterns in historical plant disease survey data encompassing both airborne and soilborne diseases. The results obtained using the VMWA method were generally different from those obtained with Lloyd's index of patchiness and beta‐binomial distribution methods, were in partial agreement with the results from spatial analysis by distance indices, and were highly consistent with the results from semivariogram and spatial autocorrelation analysis methods. Results demonstrated that the VMWA method can be applied to many types of data, including binomial diseased or healthy plant counts, incidence, severity, and number of diseased plants or pathogen propagules although directional and edge effects may limit its application.     

Portuguese migration to the Canary Islands: an analysis based on surnames

As a part of a wider analysis of population and genetic exchange between Spain and Portugal, the long-term pattern of Portuguese immigration to the Canary Islands was studied by means of the frequency of Portuguese surnames. A database of 1,995,833 individuals was obtained from the Spanish National Statistics Institute (2006). Among the 826 most frequent surnames to appear, 79 surnames of Portuguese origin were selected. The distribution of these surnames by municipalities and islands, the Fisher index of diversity, and the Lasker inter-population relationship coefficients R(ij) were considered. These coefficients were inter-correlated and correlated with other variables that could have influenced the distribution of surnames. From the observed distribution of the frequency of surnames, a non-random migration pattern conditioned by economic factors was found. The greatest diversity of surnames existed in cane cultivating areas after the first arrival of Portuguese immigrants. A later dispersion of surnames among islands was correlated with the inter-island geographic distances. In some islands the arrival of new immigrants continued due to their strategic location within the Canary archipelago. The Canary Islands reveal a high frequency and diversity of Portuguese surnames. The results also prove a heterogeneous distribution of these surnames throughout the archipelago. In contrast to the Portuguese archipelagos, some Canary localities have received immigrants continuously because of their economic importance in sugar cane cultivation and strategic geographic location on the maritime routes to Africa and America.     

Surnames as indicators of European admixture in Andean Indians

The goal of the present report was to determine how well surnames assess the degree of European admixture in urban Aymara. Reflectances, which were measured at three wavelengths (425 nm, 545 nm, and 685 nm) and on two sites (the medial surface of the upper arm and the forehead), were used as genetic markers. The sample consisted of 556 Andean Indians of Aymara ancestry (305 males, 251 females; 10.0–29.9 yr) residing in La Paz, Bolivia (average altitude of about 3600 m). The first component from a principal components analysis was demonstrated to assess the underlying genetics of pigmentation, after controlling for tanning and vascularity, the two primary environmental modifiers of skin color. The scores associated with the first principal component were there-force entered into a discriminant function analysis, which indicated that surnames provide a useful indirect index of the degree of European admixture in urban Aymara. However, these results also suggested that the relationship between, surnames and ethnicity is not equally strong across all surname categories. In particular, the likelihood of correctly predicting surname category from reflectances was about twice that expected by chance alone in individuals with two Aymara or two Spanish surnames but was slightly less than would be expected by chance alone in those with mixed surnames. In addition, the findings of this study suggested that there may be significant genetic differences between rural and urban Aymara.     

科尔沁沙地草地植被恢复演替进程中群落优势种群空间分布格局研究

通过对处于流动沙地、半固定沙地和固定沙地等不同恢复演替阶段的群落的取样调查 ,研究了科尔沁沙地草地植被恢复进程中群落优势种群的空间分布格局及其动态变化。运用扩散系数、聚集指数、平均拥挤度、聚块性指数、Green指数、聚集强度、Poisson分布和负二项分布的 χ2 拟合检验等 7项指标 ,对群落优势种群的分布格局的研究结果基本一致 ,大多数物种的空间分布呈显著的聚集分布。在演替进程中种群格局强度的变化和群落总体聚集程度的变化与种群动态和群落结构的空间异质性相对应 ,较高的聚集程度是种群分布斑块化和群落结构的空间异质性的反映 ,随着演替进展 ,优势种的种群数量扩展 ,但种群分布的聚集强度下降 ,群落结构的空间异质性降低。在 7种测定分布格局的指标中 ,聚块性指数、Green指数和聚集强度是无量纲的指标 ,其大小不受种群大小的影响 ,其变化可以较好地指示格局强度本身的变化 ,并与种群动态和群落结构变化相联系     

Surnames and cancer genes

The surname analysis of over 40,000 Wisconsin cancer mortalities for the period 1979 through 1985 partially reveals the relative genetic component of various major cancers. The surname frequencies and frequency distributions indicate that both tumor-promoting and tumor-suppressing genes may be involved. A number of cancers exhibit some probable genetic component, but genetic involvement seems marked in male and female leukemia and male lung cancer. Evidence is found for autosomal and sex-linked, dominant and recessive patterns. Most surprising is the strong evidence for tumor-suppressing genes for most cancers. Clustering of surnames across cancers evinces a number of Wisconsin surnames that may be involved in a cancer family syndrome.