Vertical Stratification Responses of an Arboreal Dung Beetle Species to Tropical Forest Fragmentation in Malaysia

Little is known about how arboreal arthropods respond to forest disturbance. We assessed how rain forest fragmentation affected the vertical stratification of arboreal dung beetles in Peninsular Malaysia. An arboreal dung beetle species (Onthophagus sp.) moved closer to the forest floor in smaller fragments, suggesting a downward shift in its foraging possibly in response to fragmentation.     

木质藤本及其在热带森林中的生态学功能

木质藤本是热带森林的一个重要组分,直接或间接地影响着森林中树木的生长和更新,改变森林树木的种类组成,并且可以通过改变森林碳固定量等方式在生态系统水平上发挥作用。全球气候的变化,以及热带森林片断化程度的加剧,将很大程度上影响着木质藤本的多样性和丰富度,其特殊的生物学特性将在森林动态中发挥更加重要的作用。本文结合国内外目前木质藤本研究现状,概述了木质藤本的一般知识（包括木质藤本的定义和生物学特性等）,介绍了木质藤本全球分布格局、其多样性维持机理以及木质藤本在森林生态系统中的功能与作用,并就存在的一些问题以及需进一步开展的工作展开了讨论。     

The Conservation of Saproxylic Insects in Tropical Forests: A Research Agenda

Invariably, insects are overlooked when tropical forest management issues are discussed, because there are so many species, they are taxonomically intractable and so poorly known. Often people take the view that if you look after the vegetation and vertebrates, the insects will look after themselves. This may be true for some functional groups, but for saproxylic insects, this seems unlikely. Their study deserves high priority, since they are dependent on the very resource – wood – whose removal from the ecosystem is the usual object of forest management. Given the current international effort to develop 'criteria and indicators' to monitor sustainable forest management for biodiversity values, there is a window of opportunity for sound ecological research on saproxylic insects to influence the formulation of forest policy such that their needs can be taken into account. There is already a large body of knowledge on temperate and boreal region saproxylic insects, and on the effects that logging has on them, but knowledge of the tropical forest situation lags far behind. This paper proposes a research agenda to enable the needs of saproxylic insects to be taken into account in natural forest management in the tropics. Basic questions, such as whether logging has so far had an impact on tropical saproxylic insects, and whether there are workable sampling techniques to investigate this, still remain to be addressed and deserve high priority. The links between the responses of saproxylic insects and more 'charismatic' study species need to be investigated. We also need to know whether there is a correlation between the intensity of logging and the response of saproxylic insects, and, critically, whether we would be justified in measuring some surrogate aspects of forest structure (as potential habitat for saproxylic insects) rather than the saproxylic insects themselves, and modelling this to determine likely impacts of different management regimes. We consider such an ambitious research agenda as justified given the scale of impact that forest use and management is likely to have on tropical forest insects in the future.     

Forest Modification Affects Diversity (But Not Dynamics) of Speciose Tropical Pyraloid Moth Communities

We studied temporal and spatial dynamics of extremely diverse moth ensembles (Lepidoptera: Pyraloidea) along a gradient of forest disturbance ranging from undisturbed primary tropical rain forest to different kinds of modified forest and open cultivated land at the margin of Mount Kinabalu National Park (Sabah, East Malaysia). We sampled moths by light trapping during two periods (March‐May and August‐September 1997). We collected a total of 7724 individuals representing 680 species during 78 light‐trapping nights at six study sites. Species diversity (Fisher's α) of ensembles in undisturbed primary forest was distinctly higher than in disturbed or secondary forest. More pyraloid moths were attracted in undisturbed primary forest. Samples from disturbed primary or old‐growth secondary forest were statistically indistinguishable from the undisturbed primary forest ensemble in regard to species composition. Thus, pyraloid ensembles from disturbed forest with tall trees remaining appeared to represent impoverished subsets of the undisturbed primary forest community. The more heavily disturbed sites had a distinct fauna and showed a stronger faunal differentiation among each other. Four species of the genus Eoophyla, in which aquatic larvae feed on algae in fast‐running streams benefited prominently from forest disturbance. Temporal variation of ensembles was remarkably concordant across the disturbance gradient. Relative abundance variation of the commonest species was identical at all sites. Overall, pyraloid moths responded more sensitively to anthropogenic habitat alteration than most other moth taxa studied thus far in tropical regions and allowed for an analysis of diversity patterns at a high temporal resolution.     

Habitat Loss Reduces the Diversity of Frog Reproductive Modes in an Atlantic Forest Fragmented Landscape

Several amphibian species have ecological traits that can make them vulnerable to landscape changes, such as habitat preference and reproductive strategies. We evaluated how anuran species and their respective reproductive modes were distributed in an Atlantic Forest fragmented landscape, Southeastern Brazil. We sampled through visual encounter surveys three continuous forest sites, 12 forest fragments and five pasture areas (matrix) between July 2007 and March 2010. We recorded 50 anuran species with 15 reproductive modes, a third of them (33.3%) recorded only in continuous forest sites (modes 3, 8, 19, 25 and 36). These reproductive modes found only in continuous forest sites are typically forest‐associated, and seem to be more vulnerable to habitat loss. Additionally, we found a trend for larger fragments to harbor both higher number of types of reproductive sites and diversity of frog reproductive modes. Our findings suggests that fragment sizes can better predict the number of frog reproductive modes than the species richness in Atlantic Forest fragmented landscapes, and highlights the need to consider frog reproductive traits in future studies.     

Bat Diversity and Movement in an Agricultural Landscape in Matiguás, Nicaragua

Although agriculture dominates much of Central America, little is known about the bat assemblages that occur within agricultural landscapes and how bats use different types of tree cover within these landscapes. Using mist-nets and a mark-recapture protocol, we compared bat diversity and movement across six types of tree cover within an agricultural landscape in central Nicaragua. The tree cover types surveyed included secondary forests, riparian forests, forest fallows, live fences, pastures with high tree cover and pastures with low tree cover. We captured a total of 3084 bats of 39 species, including two new species records for the country ( Lonchorhina aurita and Molossops greenhalli ). Of these, 2970 bats and 27 species were in the Phyllostomidae family. There were significant differences in mean species density, abundance and evenness of phyllostomid bats across the different types of tree cover, but not in bat diversity. Riparian forests had the highest mean species density and bat abundance per plot. In contrast, mean bat abundance and species density were lowest in pastures with low tree cover. Of the 1947 phyllostomid bats marked, a total of 64 bats of eight species were recaptured. The average linear distance between extra-site recaptures was 2227 m (± 228 SE) and the maximum distance was 10.6 km. Bats were recorded moving between almost all types of tree cover, and especially to and from riparian forests. Our study suggests that agricultural landscapes retaining a heterogeneous tree cover may maintain a diverse bat assemblage, and that bats visit and use a variety of tree cover types within the agricultural matrix.     

Beyond Paradise—Meeting the Challenges in Tropical Biology in the 21st Century

Tropical ecosystems support a diversity of species and ecological processes that are unparalleled anywhere else on Earth. Despite their tremendous social and scientific importance, tropical ecosystems are rapidly disappearing. To usher tropical ecosystems and the human communities dependent upon them through the environmental transformations of the 21st century, tropical biologists must provide critical knowledge in three areas: 1) the structure and function of tropical ecosystems; 2) the nature and magnitude of anthropogenic effects on tropical ecosystems; and 3) the socio‐economic drivers of these anthropogenic effects. To develop effective strategies for conservation, restoration, and sustainable management of tropical ecosystems, scientific perspectives must be integrated with social necessities. A new set of principles built on a framework for pursuing relevant tropical biological research will facilitate interdisciplinary approaches, integrate biological knowledge with the social sciences, and link science with policy. We propose four broad recommendations for immediate action in tropical biology and conservation that are fundamental to all biological and social disciplines in the tropics: 1) assemble and disseminate information on life's diversity in the tropics; 2) enhance tropical field stations and build a worldwide network to link them with tropical field biologists at their field sites; 3) bring the field of tropical biology to the tropics by strengthening institutions in tropical countries through novel partnerships between tropical and temperate zone institutions and scientists; and 4) create concrete mechanisms to increase interactions between tropical biologists, social scientists, and policy makers.     

Genetic Diversity of a Tropical Tree Species,Shorea leprosula Miq. (Dipterocarpaceae), in Malaysia: Implications for Conservation of Genetic Resources and Tree Improvement1

Genetic diversity and population genetic structure of Shorea leprosula was investigated using seven natural populations distributed throughout Peninsular Malaysia and one natural population from Borneo. The mean population and species level genetic diversity were exceptionally high (H_e= 0.369 ± 0.025 and 0.406 ± 0.070, respectively). Heterozygosity varied among populations, ranging from 0.326 to 0.400, with the highest values found in the populations from central Peninsular Malaysia. Correlations among ecological factors (longitude, latitude, and annual rainfall) were not significant (P > 0.05), indicating that these ecological variables were not responsible for the observed genetic differences among populations. The Bangi adult population exhibited a higher level of observed heterozygosity but lower fixation indices in comparison to its seedling population. All other seedling populations also showed positive fixation indices (f), indicating a general excess of homozygotes. This also may suggest selection against homozygotes between the seedling and adult stages. A low level of population differentiation was detected (G_ST= 0.117 with the Lambir population and GST= 0.085 without the Lambir population). Furthermore, gene flow (N_m) between populations was not significantly correlated with geographical distances for the populations within Peninsular Malaysia. Cluster analysis also did not reflect geographical proximity and gave little insight into the genetic relatedness of the populations. This may indicate that the populations sampled are part of a continuous population with fragmentation having occurred in the recent past.     

Relations Between Regional–Local Habitat Loss and Metapopulation Properties of Epiphyllous Bryophytes in the Brazilian Atlantic Forest

Richness and occupancy patterns of epiphyll bryophytes in a fragmented landscape of tropical rain forests in northeastern Brazil (Murici Ecological Station) were investigated to assess the influence of regional and local disappearance of habitat on epiphyllous metapopulation indicators. Bryophytes were collected from ten forest fragments, from the fragment's border to 100 m inside the forest. The number of colonized phorophytes and the cover on leaves were scored. Decreasing trends in regional and local abundance linked to habitat loss were observed, which may be related to the sexual and asexual expression. Although fertility was not related to constancy in the fragments, frequently fertile species colonized more sites within fragments than infertile species. Landscape metrics and indicators of habitat quality explained better the variation in epiphyll richness and occupancy than distance from the forest's edge. This suggests that the abrupt habitat quality modification resulting from edge creation is secondary in the area studied, while irreversible landscape modifications still play an important role. The results add to empirical support that metapopulations are prone to negative and long-term effects in fragmented landscapes. Thus, the selection of priority areas for conservation must take into account the remaining amount of habitat as well as the connectivity between the landscape's patches.     

Genetic Divergence During Long‐term Isolation in Highly Diverse Populations of Tropical Trees Across the Eastern Arc Mountains of Tanzania

The Eastern Arc Mountains are believed to support some of the oldest tropical forest in the world. The current distribution of this forest is highly fragmented due to a combination of long‐term effects of past changes in global climate and more recent deforestation. We sought to explore the hypothesized antiquity and long‐term isolation of the Eastern Arc montane forests based on an assessment of the geographical distribution and interspecies similarity of chloroplast DNA sequence variation in five forest trees. Data were used to investigate regional patterns of diversity and population structure based on intraspecific phylogenies, and results were interpreted against hypotheses on ecosystem age and connectivity. Regional diversity was high, with up to 22 chloroplast DNA haplotypes being recorded within a species across the sampled populations. Geographical concordance of genetic and geographic structure was weak to absent in all species and there was little similarity of genetic structure between species. Haplotype sharing between mountain blocks was extremely limited. The generally weak phylogeographical structure, in conjunction with high regional diversity and genetic uniqueness of individual mountain forests does not support the assumption of widespread genetic connectivity of the mountain forests, indicating instead a pattern of past isolation and ongoing diversification. Our findings substantially add to understanding patterns of diversity in this region and lend weight to calls to use more sophisticated biodiversity assessments when setting regional conservation and research funding priorities.     

Predicting the Long-Term Effects of Hunting on Plant Species Composition and Diversity in Tropical Forests

Hunting can change abundances of vertebrate seed predators and seed dispersers, causing species‐specific changes in seed dispersal and seed predation and altering seedling communities. What are the consequences of these changes for the adult plant community in the next generation and beyond? Here, I derive equations showing how reduced seed dispersal reduces plant reproduction by intensifying kin competition, increasing vulnerability to natural enemies, and reducing the proportion of seeds passing through disperser guts. I parameterize these equations with available empirical data to estimate the likely effects on next‐generation abundances. I then consider the indirect effects and longer‐term feedbacks of changed seed or adult abundances on reproductive rates due to density‐dependent interactions with natural enemies and mutualists, as well as niche differentiation with competitors, and discuss their likely qualitative effects. The factors limiting seed disperser and seed predator populations in natural and hunted forests emerge as critical for determining the long‐term effects of hunting on rates of seed dispersal and seed predation. For example, where seed dispersers are held to a constant abundance by hunters, decreases in the availability of their preferred food plants are expected to lead to increased per‐seed dispersal probabilities, potentially to the point of compensating for the initial disperser decline. I close by discussing the likely reversibility of hunting‐induced changes in tropical forests and key questions and directions for future research.     

Modeling Habitat Occupancy of Orange-Crowned Warblers in Managed Forests of Oregon and Washington,USA

Abstract: As part of a habitat management planning process for commercially managed forests, we developed and evaluated habitat occupancy models for the orange-crowned warbler (Vermivora celata), a conservation priority species in Oregon and Washington, USA. We used repeated surveys to classify a random sample of managed conifer stands at the McKenzie, PeEll, and Tolt study sites in western Oregon and Washington as either occupied or unoccupied during 1994–1995. We modeled occupancy and detection probabilities as a function of stand-level habitat characteristics subject to manipulation by management activities. The best-fitting model indicated that orange-crowned warblers were 2 times (95% CI: 0.99-5.1) and 3.8 times (95% CI: 1.5–6.1) as likely to occupy a stand for every 5% increase in evergreen shrub cover and 5-m decrease in canopy lift (ht to lowest live branch), respectively. Management actions that maintain evergreen shrub cover >10% and permit development of low canopy lifts (4–10 m) should promote habitat occupancy by the orange-crowned warbler in commercial forests in western Oregon and Washington.     

Clidemia hirta Invasion at the Pasoh Forest Reserve: An Unexpected Plant Invasion in an Undisturbed Tropical Forest1

Clidemia hirta is a highly invasive shrub in tropical forests throughout the world, but has had little success invading mainland sites and undisturbed forests. In the early 1990s, this plant was found to have invaded an unexpected site, an undisturbed continental tropical forest at Pasoh, Peninsular Malaysia. In 1997, a study was conducted of the C. hirta population at the Pasoh Forest Reserve. A demographic survey of the 50–ha long–term research plot at Pasoh located 1002 C. hirta individuals, 69 of which were reproductive at the time of the study. All but 8 individuals were located in high light gaps or gap edges. Relative growth rates were significantly higher in gaps and gap edges than in the understory, and no reproductive individuals were found in the understory. Mean plant size and dry biomass density increased steadily over the course of the study, while the observed mortality rate was 0 percent over two months. The biomass density of Clidemia at Pasoh was <500 g/ha at the conclusion of this study, but because the population is confined almost exclusively to high light environments, its density in these sites is much higher. The location of C. hirta plants in gaps was significantly correlated with past disturbance by wild pigs, suggesting that soil disturbance and light availability are essential for their establishment. The implication of this study is that by competing with native species in gaps, C. hirta invasion has the potential to alter forest regeneration at Pasoh. Changing land use practices near the reserve have increased the number of wild pigs, and thus the level of disturbance, which may explain the recent success of C. hirta at Pasoh.     

Distribution and Local Species Diversity of Freshwater Ostracoda in Relation to Habitat in the Kahramanmaraş Province of Turkey

To understand the relationship between local (alpha) diversity of ostracods and their distribution, 95 different locations were randomly sampled from southern Kahramanmaraş (Turkey) between 7 June and 31 July, 2010. Total of 46 ostracods were encountered from 68 sites. Four alpha diversity indices (Shannon‐Wiener, Menhinick, Brillouin, Margalef) individually quantified higher species diversity and evenness for three types of habitats (limnocrene springs, ponds, stream). Diversity partitioning analyses revealed a significant and substantial beta‐diversity among the sites. First axis of CCA exhibited about 71% of the correlations between species and environmental variables. Water temperature, having either a negative or positive correlation with individual species, was the most influential factor affecting diversity. Altitude did not significantly affect the numbers of species identified from the elevation ranges of 400–600 m and 800–1000 m. At least nine cosmopolitan species from 56 sites had an important contribution to local diversity. Hence, suitability of aquatic (ecological) conditions and habitat types provide better explanations for ostracod diversity than do other abiotic factors such as altitude, pH and salinity. The results may support the Habitat Diversity Hypothesis but the study needs to be expanded to different regions and cannot be generalized at the moment. (© 2012 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Heterotrophic Soil Respiration in Relation to Environmental Factors and Microbial Biomass in Two Wet Tropical Forests

We examined the correlation between fungal and bacterial biomass, abiotic factors such as soil moisture, carbon in the light soil fraction and soil nitrogen to a depth of 0–25 cm and heterotrophic soil respiration using a trenching technique – in a secondary forest (Myrcia splendens, Miconia prasina and Casearia arborea) and a pine (Pinus caribeae) plantation in the Luquillo Experimental Forest in Puerto Rico. Soil respiration was significantly reduced where roots were excluded for 7 years in both the secondary forest and the pine plantation. Microbial biomass was also significantly reduced in the root exclusion plots. In root exclusion treatment, total fungal biomass was on average 31 and 65% lower than the control plots in the pine plantation and the secondary forest, respectively, but the total bacterial biomass was 24 and 8.3% lower than the control plots in the pine plantation and the secondary forest, respectively. Heterotrophic soil respiration was positively correlated with fungal biomass (R²=0.63, R²=0.39), bacterial biomass (R²=0.16, R²=0.45), soil moisture (R²=0.41, R²=0.56), carbon in light fraction (R²=0.45, R²=0.39) and total nitrogen (R²=0.69, R²=0.67) in the pine plantation and the secondary forest, respectively. The regression analysis suggested that fungal biomass might have a greater influence on heterotrophic soil respiration in the pine plantation, while the bacterial biomass might have a greater influence in the secondary forest. Heterotrophic soil respiration was more sensitive to total N than to carbon in the light fraction, and soil moisture was a major factor influencing heterotrophic soil respiration in these forests where temperature is high and relatively invariable.     

The Rove Beetles (Coleoptera, Staphylinidae) of Exposed Riverine Sediments in Scotland and Northern England: Habitat Classification and Conservation Aspects

Exposed riverine sediments (ERS) by four rivers in Scotland and northern England were sampled for beetles in 1996 and 1997. One hundred and sixty rove beetle (Staphylinidae) species lists were analysed using ordination and classification techniques in order to identify habitat groups within and between catchments and to assess which factors were affecting species assemblage distribution. There were major differences between the species assemblages of ERS by rivers of highland and lowland catchments. Within catchments, assemblage distribution was mainly influenced by the position of sites within the catchment; vegetation cover and sediment composition had less influence. The number of rove beetle habitats was not the same as those for ground and phytophagous beetle groups, indicating that conservation considerations should take into account variations in ERS habitat diversity. A considerable number of records of nationally rare and scarce rove beetle species were recorded, most on ERS by rivers and tributaries unaffected by river management or engineering.     

The Abundance of Large Ateline Monkeys is Positively Associated with the Diversity of Plants Regenerating in Neotropical Forests

Ateline monkeys, the largest primates in the Neotropics, may disperse more than one million seeds/km²/d at sites where they are abundant, but it is unclear whether a reduction in their populations can alter plant diversity patterns. The species richness and composition of regenerating plants as a proxy of future plant communities were studied by comparing 16 sites with different ateline abundance in three countries in northwestern South America. A total of 3658 plots included 94,340 regenerating plants, which were assigned to species or morphospecies. Paired t‐tests comparing sites in the same region but with different densities of atelines, and regression analyses showed a consistent positive relationship between ateline density and plant diversity. These results were due to the larger number of stems per area and higher evenness at sites with more atelines, suggesting higher recruitment rates for dispersed seeds. Differences were also found in plant composition, as canopy, endozoochorous, and medium seed size plants were consistently more abundant in sites with more ateline monkeys than in sites with less atelines. The findings of this study suggest that these primates play a key role in plant regeneration. In order to maintain the diversity and plant composition of tropical forests for future generations, conservation of these large frugivores and other key game species is imperative.