Protein degradation in C3 and C4 plants with particular reference to ribulose bisphosphate carboxylase and glycolate oxidase

Determining the degradation characteristics of proteins is difficult due to the lack of appropriate methodologies, particularly in the case of leaf proteins. Previous studies suggest that ribulose bisphosphate carboxylase (RuBP carboxylase; EC 4.1.1.39) proteolysis may be fundamentally different in C3 and C4 plants. To test this hypothesis, the relative degradation rates of the total soluble protein, RuBP carboxylase and glycolate oxidase (EC 1.1.3.1) in the second leaves of intact C3 (Triticum aestivum L.) and C4 (Zea mays L) and Sorghum bicolor L.)plants was measured. The methodology utilized involved an efficient procedure to label the leaf proteins, the use of a double-labelling method to measure protein degradation and a single-step purification of the labelled proteins under study. RuBP carboxylase is subjected to continuous degradation in all plants investigated. Its rate of degradation is higher for Z. mays, intermediate for T. aestivum and lower for S. bicolor. When the rate of RuBP carboxylase degradation was compared with that of the total soluble protein a differential pattern was obtained for the plant species examined: whereas maize presents a faster rate of RuBP carboxylase degradation than of the total soluble protein, wheat and sorghum show similar rates. However, the rate of RuBP carboxylase proteolysis in the three plant species studied is much lower than the rate of glycolate oxidase degradation. The results obtained indicate that, under the conditions of study, the degradation characteristics of plant RuBP carboxylase, as those of glycolate oxidase, are species specific, in a way suggesting that they do not depend on the type of photosynthetic metabolism of the species considered (C3 or C4).     

Protein degradation in lemna with particular reference to ribulose bisphosphate carboxylase: I. The effect of light and dark

Ribulose bisphosphate carboxylase from Lemna minor resembles the structure reported for the enzyme from other plants. When grown in the light, the enzyme appears to undergo little or no degradation, as measured by a double-isotope method. This situation is similar to that reported for wheat and barley, but is unlike that reported for maize, where the enzyme degrades at the same rate as total protein. Prolonged periods of darkness usually induce leaf senescence, characterized by the rapid degradation of chlorophyll and protein, with ribulose bisphosphate carboxylase undergoing preferential degradation. In L. minor there is selective protein degradation in the dark, but chlorophyll and ribulose bisphosphate carboxylase are stable when fronds are kept in the darkness for up to 8 days. It appears that Lemna is not programmed to senesce, or at least that darkness does not induce senescence in Lemna. Although there is no evidence for in vivo degradation or modification of ribulose bisphosphate carboxylase during prolonged periods of darkness, extracts from fronds which have been kept in the dark for periods in excess of 24 hours convert ribulose bisphosphate carboxylase to a more acidic form. The properties of the dark-induced system which acts on ribulose bisphosphate carboxylase, suggest that it may be a mixed function oxidase. The proposition that the selectivity of protein degradation is genetically determined, so that the rate at which a protein is degraded is determined by its charge or size, was tested for fronds grown in the light or maintained in the dark. There was no significant correlation between protein degradation and either charge or size, in light or dark.     

Activity and properties of ribulose-1,5-bisphosphate carboxylase of sugarbeet plants grown under saline conditions

Activity and properties of sugar beet ( Beta vulgaris var. Polyrave) leaf ribulose-1,5-bisphosphate (RuBP) carboxylase were investigated following the exposure of plants to NaCl in the range of 45 to 270 m M for 7 days. An enhancement in RuBP carboxylase activity was found both in crude extracts and in purified preparations following plant exposure to 180 m M NaCl. Kinetic properties of the enzyme were significantly affected by salinity as determined by a 4.5 fold increase in K_m [HCO^-₃] and K_m [CO₂], and a V_max increase of 50%. Data based on polyacrylamide-gel-electrophoresis suggest that the molecular weight of the small subunit of RuBP carboxylase was reduced from 15,500 to 12,500 in plants grown under salinity. The large subunit was much less affected and no change was found in the whole enzyme. The enzyme isolated from plants exposed to salinity contained about 50% fewer titratable SH groups as compared with the control. The results indicate that in this plant, mild salt concentrations induced conformational changes in RuBP carboxylase which may be responsible for its tolerance to semi-salinity.     

水稻叶片生育过程中RubisCO活性与光合、光呼吸的关系

水稻生育过程中,ＲｕＢＰ羧化酶活性与光合速率、ＲｕＢＰ加氧酶活性与光呼吸速率、ＲｕＢＰ羧化酶活性与加氢酶活性以及光合速率与光呼吸速率之间是相关的。籼型品种与粳型品种间酶活性的高低及光合、光呼吸速率的高低基本一致,籼型三系杂交稻（Ｆ１）无明显的光合优势。酶的羧化活性的高低只在一定范围内与光合速率的高低平行。在正常生育条件下,酶蛋白的数量不是水稻光合速率的限制因子。     

Variations in ribulose 1,5-bisphosphate carboxylase protein levels,activities and subcellular distribution during photoautotrophic batch culture of Chlorogloeopsis fritschii

Ribulose 1,5-bisphosphate (RuBP) carboxylase is present in the cytoplasm and carboxysomes (polyhedral bodies) of the cyanobacterium Chlorogloeopsis fritschii. In vitro enzyme activities have been measured throughout photoautotrophic batch culture, together with RuBP carboxylase protein concentrations, determined by rocket immunoelectrophoresis. Enzyme activities and protein levels in the cytoplasmic and carboxysomal fractions varied in an apparently inverse manner during growth. The RuBP carboxylase activities per unit enzyme protein were maximal in late lag phase/early exponential phase for both cellular enzyme pools. Both rates per unit enzyme protein declined during exponential phase, cytoplasmic enzyme activity remaining consistently higher than that of the carboxysomal enzyme. Activities per unit cytoplasmic and carboxysomal enzyme protein showed very low, similar rates in late stationary phase and death phase. Dialysis experiments indicated that such changes were not due to interference in activity assays by soluble endogenous effectors. Major shifts in the subcellular distribution of RuBP carboxylase protein were found versus culture age, enzyme protein levels being predominantly carboxysomal in lag phase, mainly soluble in exponential phase and then mainly carboxysomal again in stationary/death phase. The data are discussed in terms of carboxysome function and the question of control of RuBP carboxylase synthesis in cyanobacteria.Abbreviations RuBP D-ribulose 1,5-bisphosphate - LTIB low Tris isolation buffer - HTIB high Tris isolation buffer - RIE rocket immunoelectrophoresis     

Correlation of Activity and Amount of Ribulose 1,5-bisphosphate Carboxylase with Chloroplast Stroma Crystals in Water-Stressed Willow Leaves

Changes in the activity and amount of ribulose 1,5-bisphosphate(RuBP)carboxylase (E.C. 4.1.1.39 [EC] ) were studied in well-watered plantsof Salix ‘aquatica gigantea’ and in similar plantsduring three different water stress treatments and after rewatering.The chloroplast ultrastructure of these plants was examinedby electron microscopy. The amounts of crystallized proteinin the chloroplast stroma were assessed according to the areaof crystal structure seen in the thin sections. RuBP carboxylase activity decreased with decreasing leaf waterpotentials but recovered upon rewatering, except when leaveshad been exposed to severe water stress. The percentage of totalchloroplast area made up of crystal inclusions decreased withdecreasing leaf water potentials. After rewatering, the crystalseither disappeared or the amount decreased markedly. Both RuBPcarboxylase activity and the area of crystal inclusions increasedinitially with increased extractable RuBP carboxylase proteinbut decreased with further increases above 6700–7000 µgRuBP carboxylase protein mg^–1 chlorophyll. In well-wateredand water-stressed plants the activity of RuBP carboxylase,based on amount of chlorophyll, increased with an increasingamount of crystal inclusions in the chloroplast stroma. In rewateredplants no such correlation was observed, and the low percentageof crystal inclusions in the chloroplast area was independentof RuBP carboxylase activity. Key words: Chloroplast stroma crystals, ribulose 1,5-bisphosphate carboxylase, Salix, water stress     

Activity and quantity of ribulose bisphosphate carboxylase-and phosphoenolpyruvate carboxylase-protein in two Crassulacean acid metabolism plants in relation to leaf age,nitrogen nutrition,and point in time during a day/night cycle

Activity of ribulose 1,5-bisphosphate (RuBP) carboxylase in leaf extracts of the constitutive Crassulacean acid metabolism (CAM) plant Kalanchoe pinnata (Lam.) Pers. decreased with increasing leaf age, whereas the activity of phosphoenolpyruvate (PEP) carboxylase increased. Changes in enzyme activities were associated with changes in the amount of enzyme proteins as determined by immunochemical analysis, sucrose density gradient centrifugation, and SDS gel electrophoresis of leaf extracts. Young developing leaves of plants which received high amounts of NO ₃ ^- during growth contained about 30% of the total soluble protein in the form of RuBP carboxylase; this value declined to about 17% in mature leaves. The level of PEP carboxylase in young leaves of plants at high NO ₃ ^- was an estimated 1% of the total soluble protein and increased to approximately 10% in mature leaves, which showed maximum capacity for dark CO₂ fixation. The growth of plants at low levels of NO ₃ ^- decreased the content of soluble protein per unit leaf area as well as the extractable activity and the percentage contribution of both RUBP carboxylase and PEP carboxylase to total soluble leaf protein. There was no definite change in the ratio of RuBP carboxylase to PEP carboxylase activity with a varying supply of NO ₃ ^- during growth. It has been suggested (e.g., Planta 144, 143–151, 1978) that a rhythmic pattern of synthesis and degradation of PEP carboxylase protein is involved in the regulation of -carboxylation during a day/night cycle in CAM. No such changes in the quantity of PEP carboxylase protein were observed in the leaves of Kalanchoe pinnata (Lam.) Pers. or in the leaves of the inducible CAM plant Mesembryanthemum crystallinum L.Abbreviations CAM Crassulacean acid metabolism - RuBP ribulose 1,5-bisphosphate - PEP phosphoenolpyruvate - G-6-P glucose-6-phosphate     

Variation of RuBP carboxylase activity among anther-derived plants of Solanum phureja

The effect of genotype and ploidy on RuBP carboxylase (EC 4.1.1.39) activity, chlorophyll content, leaf area, chloroplast ultrastructure and not photosynthesis among monoploid. diploid and tetraploid anther-derived plants of Solanum phureja Juz, and Buk. was studied. Within the monoploid group, RuBP carboxylase activity and concentration displayed a significant genotypic effect. For the diploids, variation among genotypes was significant for total protein content and maximum specific activity of RuBP carboxylase, and among the tetraploids for net photosynthesis and specific leaf weight. Ploidy effect was evident regarding net photosynthesis, leaf area and chlorophyll content. The different ploidy groups among the anther-derived plants surpassed the anther donor plant for all characteristics except maximum activity of RuBP carboxylase and net photosynthesis. For the latter only the tetra-ploid group was superior to the anther source plant. However, a monoploid genotype with an increase of 9% in maximum activity of RuBP carboxylase over the anther-donor plant was identified. Segregation of trails rind differential gene expression together with possible mutations during androgenesis are discussed as sources of variation.     

Biochemical Specialization of Photosynthetic Cell Layers and Carbon Flow Paths in Suaeda monoica

Suaeda monoica Frossk. ex J. F. Gmel is a C₄ plant with three different photosynthesizing cell layers. The outer chlorenchymatous layer shows a high activity of phosphoenolpyruvate (PEP) carboxylase but none of ribulose bisphosphate (RuBP) carboxylase. The electrophoretic protein band of RuBP carboxylase was missing in this layer. The second chlorenchymatous cells layer shows a very high activity of RuBP carboxylase and NAD malic enzyme and only traces of activity of PEP carboxylase. The third photosynthesizing cell type is comprised of the water tissue. It has moderate activities of RuBP carboxylase and PEP carboxylase. A model for carbon flow in Suaeda monoica leaves is proposed.     

Relation between Nitrogen and Ribulose-1,5-bisphosphate Carboxylase in Rice Leaves from Emergence through Senescence

The relation between N content and ribulose-l,5-bisphosphate(RuBP) carboxylase protein was examined in the 12th leaf bladeof rice. Plants were grown under different amounts of N afterthe emergence of the 12th leaf blade. RuBP carboxylase proteinincreased with leaf N during leaf expansion. The synthesis ofRuBP carboxylase predominated during this period, and changesin the amounts of carboxylase synthesized until leaf death paralleledchanges in the N influx to the leaves. When the carboxylasereached its maximum content, the proportion of RuBP carboxylaseto leaf N was 27 to 28% irrespective of N treatment. As theleaf senesced, however, this proportion differed significantlywith the treatment. It was higher in the N-deficient leaf thanin the N-sufficient leaf. This was due to different patternsof RuBP carboxylase degradation for the treatments during senescence.RuBP carboxylase was degraded actively during the early stageof senescence in the N-sufficient leaf, whereas its degradationproceeded almost constantly in the N-deficient leaf during senescence. (Received October 17, 1983; Accepted January 27, 1984)     

Oxidative stress causes rapid membrane translocation and in vivo degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase.

We have studied the turnover of an abundant chloroplast protein, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rbu-P2 carboxylase/oxygenase), in plants (Spirodela oligorrhiza and Triticum aestivum L.) and algae (Chlamydomonas reinhardtii and C. moewusii) induced to senesce under oxidative conditions. Rbu-P2 carboxylase/oxygenase activity and stability in vivo were found to be highly susceptible to oxidative stress, resulting in intermolecular cross-linking of large subunits by disulfide bonds within the holoenzyme, rapid and specific translocation of the soluble enzyme complex to the chloroplast membranes, and finally protein degradation. The redox state of Cys-247 in Rbu-P2 carboxylase/oxygenase large subunit seems involved in the sensitivity of the holoenzyme to oxidative inactivation and cross-linking. However, this process did not drive membrane attachment or degradation of Rbu-P2 carboxylase/oxygenase in vivo. Translocation of oxidized Rbu-P2 carboxylase/oxygenase to chloroplast membranes may be a necessary step in its turnover, particularly during leaf senescence. Thus, processes that regulate the redox state of plant cells seem closely intertwined with cellular switches shifting the leaf from growth and maturation to senescence and death.     

Photosynthesis and Activation of Ribulose Bisphosphate Carboxylase in Wheat Seedlings : Regulation by CO(2) and O(2)

Photosynthetic carbon assimilation in plants is regulated by activity of the ribulose 1,5-bisphosphate (RuBP) carboxylase/oxygenase. Although the carboxylase requires CO₂ to activate the enzyme, changes in CO₂ between 100 and 1,400 microliters per liter did not cause changes in activation of the leaf carboxylase in light. With these CO₂ levels and 21% O₂ or 1% or less O₂, the levels of ribulose bisphosphate were high and not limiting for CO₂ fixation. With high leaf ribulose bisphosphate, the K_act(CO₂) of the carboxylase must be lower than in dark, where RuBP is quite low in leaves. When leaves were illuminated in the absence of CO₂ and O₂, activation of the carboxylase dropped to zero while RuBP levels approached the binding site concentration of the carboxylase, probably by forming the inactive enzyme-RuBP complex.

The mechanism for changing activation of the RuBP carboxylase in the light involves not only Mg²⁺ and pH changes in the chloroplast stroma, but also the effects of binding RuBP to the enzyme. In light when RuBP is greater than the binding site concentration of the carboxylase, Mg²⁺ and pH most likely determine the ratio of inactive enzyme-RuBP to active enzyme-CO₂-Mg²⁺-RuBP forms. Higher irradiances favor more optimal Mg²⁺ and pH, with greater activation of the carboxylase and increased photosynthesis.

     

An accurate method to quantify ribulose bisphosphate carboxylase content in plant tissue

A method is described to accurately measure the content of ribulose bisphosphate carboxylase (RuBP carboxylase, EC 4·1.1·39) in plant tissues. This procedure, termed the internal standard method, involves extraction of the plant tissue (containing an unknown amount of ¹H‐RuBP carboxylase) in a buffer containing a known amount of previously purified ³H‐RuBP carboxylase (internal standard). The rapid and efficient, single step copurification of ¹H‐ and ³H‐RuBP carboxylases on the Mono Q column of the Fast Protein Liquid Chromatography System (FPLC), or by sucrose density gradient ultracentrifugation, allows the accurate estimation of the purification yield (³H in purified enzyme/³H in the extraction buffer). Knowing the amount of ¹H‐RuBP carboxylase in the purified enzyme and the purification yield, one can calculate the concentration of ¹H‐enzyme present in the plant tissue. This procedure overcomes some of the main constraints associated with the methods described in the literature: it takes into account the enzyme that is lost during the clarification of the protein extracts or during the isolation and purification processes; it is independent of the proteolysis that occurs in vitro by the action of cell proteases; it is not affected by the presence of RuBP carboxylase breakdown products; it is not influenced by any of the factors that control the catalytic activity or the activation state of the enzyme; and, it does not depend on the specificity of antigen‐antibody reactions.     

Proteolysis of ribulose-1,5-bisphosphate carboxylase/oxygenase in leaves of Citrus explants throughout the annual cycle and its regulation by ethylene

Leaf senescence and ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBP carboxylase, EC 4.1.1.39) degradation in orange [ Citrus sinensis (L.) Osbeck cv. Washington Navel] explants have been investigated. Explants consisted of a segment of stem (ca 15 cm) and 5 mature leaves. In vitro RuBP carboxylase degradation was determined by culturing the explants in water for different periods of time (3 days usually) and quantifying the two RuBP carboxylase subunits in the extracts following sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). In vitro RuBP carboxylase degradation was estimated by autodigestion of leaf extracts and SDS-PAGE. The extent of in vivo RuBP carboxylase degradation in explants cultured under 16 h light/8 h dark photoperiod varied throughout the year and showed a cyclic behaviour correlated with the growth cycle of Citrus. The highest proteolytic activity both in vivo and in vitro was found in explants made from April to August coinciding with the maximum vegetative growth period of the tree.
Leaf senescence and abscission could be retarded significantly at any time of the year by maintaining the explants continuously in the dark. Treatment of the explants in the dark with a continuous flow of ethylene enhanced both leaf abscission and rate of RuBP carboxylase degradation, proportionally to ethylene concentration (0.1-0.6 ppm). Ethylene-induced senescence of Citrus leaf explants in the dark appears to be a convenient model system to study the regulation of the proteolytic degradation of RuBP carboxylase.     

An investigation into the interaction between nitrogen nutrition,photosynthesis and photorespiration

Photosynthetic CO₂ assimilation, photorespiration and levels of glycollate oxidase and ribulose bisphosphate (RuBP) carboxylase were measured in barley, wheat and maize plants grown on media containing nitrate or ammonium or in plants transferred from nitrate to ammonium. The CO₂ compensation point and photorespiratory CO₂ release were not altered by the nitrogen growth regime nor by transfer from nitrate to ammonium. In barley and wheat plants grown on ammonium the levels of glycollate oxidase and RuBP carboxylase per unit leaf area were higher than in nitrate grown material. These differences were not evident when the results were expressed on a protein or chlorophyll basis. The ratio of glycollate oxidase activity to RuBP carboxylase activity was not altered by the nitrogen regime.     

The effect of magnesium and other ions on the distribution of ribulose 1,5-bisphosphate carboxylase in chloroplast extracts

In an attempt to produce chloroplast extracts containing ribulose 1,5-bisphosphate (RuBP) carboxylase in its fully activated state, MgCl₂ and NaHCO₃ were included in the medium used to osmotically shock chloroplasts. Extracts prepared in this manner contained lower levels of the enzyme than those prepared in the absence of MgCl₂ and NaHCO₃. The difference in enzyme levels was found to be attributable to an association in the presence of Mg²⁺, between RuBP carboxylase and the thylakoids removed from the extract during its preparation. Some monovalent cations caused a similar association, although to a lesser extent. The trivalent cation Tris(ethylenediamine) cobalt(III) was more effective in causing this association, but was highly inhibitory to the enzyme. The results suggest that the attraction between thylakoids and RuBP carboxylase in the presence of certain ions is likely to be electrical in nature. The results are discussed in terms of the media used to isolate RuBP carboxylase.     

Kinetics of ribulosebisphosphate carboxylase at high protein concentration

Kinetic parameters of ribulos-1,5-bisphosphate carboxylase/oxygenase (RuBP carboxylase) are usually evaluated in dilute solutions (less than 0.1 mg ml-1). Yet, this enzyme occurs in vivo at 100-200 mg ml-1 and a total protein concentration 300-400 mg ml-1. Enzymes can change their catalytic properties upon 'crowding'. Hence it became of interest to determine whether RuBP carboxylase elicits any properties not observable in dilute solution. Pre-steady state progress curves of fully activated enzyme showed an initial burst followed by a slower rate of product formation. The extent of the burst increased as concentration ratios of RuBP and RuBP carboxylase decreased. The burst corresponds to 1/8 turnover per holoenzyme or 1 turnover per active site. No discontinuity in progress curves was observed with partially activated enzyme.     

Ribulose-l,5-bisphosphate carboxylase activity and influence of air pollution in spruce

Methods were established, which render possible a simultaneous determination of ri-bulose-l,5-bisphosphate (RuBP) carboxylase (EC 4.1.1.39) activity and chlorophyll content of Norway spruce (Picea abies Karst.) needles from a detergent-containing aqueous crude extract. Spruce RuBP carboxylase was tentatively characterized with regard to kinetic properties. Recovery experiments employing purified wheat RuBP carboxylase proved quantitative extraction of the enzyme from spruce foliage. Five timber stands consisting of 35–62 years old spruce, two of which exhibited the typical symptoms of recent spruce decline, were compared. For the needle generations 1 to 4 the enzyme activities as well as chlorophyll and protein concentrations were determined. The results do not indicate an involvement of RuBP carboxylase in spruce decline.     

苜蓿二磷酸核酮糖(RuBP)羧化酶体内活化作用的调节

苜蓿RuBP羧化酶的初活性和活化作用在不饱和光强下与光合速率一样随光强增加而增加。缺硫培养苜蓿叶片的光合速率和RuBP羧化酶的含量、初活性及总活性均比对照有不同程度的降低,其中酶的初活性与光合速率两者减少的趋势比较接近,说明RuBP羧化酶的初活性可能在光合CO_2固定作用中具有决定作用。然而,缺硫植株中酶的活化作用比对照明显增高。酶的活化作用与叶片中的叶绿素,6-PG,NADPH及ATP相对酶含量的比值成正比,与体内的酶量成反比。     

Purification and degradation of ribulose bisphosphate carboxylase from soybean leaves

A rapid method is described for the preparation of up to 500 milligrams of pure ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBP carboxylase) from 250 grams of field-grown soybean leaves. Leaves were extracted in 20 millimolar phosphate (pH 6.9) at 4°C, containing 4% (w/v) polyvinylpolypyrrolidone, 10 micromolar leupeptin, 1 millimolar phenylmethyl sulfonylfluoride, 1 millimolar diethyldithiocarbamate, 5 millimolar MgCl₂, 1 millimolar dithiothreitol, 0.2 millimolar ethylene-diaminetetraacetic acid, 50 millimolar 2-mercaptoethanol. The extract was incubated in the presence of 5 millimolar ATP at 58°C for 9 minutes, then centrifuged and concentrated. Sucrose gradient centrifugation into 8 to 28% (w/v) sucrose on a vertical rotor for 2.5 hours yielded pure enzyme with a specific activity of 1.1 to 1.3 micromoles per minute per milligram protein at pH 8.0, 25°C. Soybean plants of the same line grown (at 400 microeinsteins per square meter per second) in growth chambers yielded enzyme with a specific activity of 0.6 to 0.7 micromoles per minute per milligram protein. During prolonged purification procedures a proteolytic degradation of RuBP carboxylase caused complete loss of catalytic activity. Without destroying the quaternary structure of the enzyme, a 3 kilodalton peptide was removed from all large subunits before further breakdown (removal of a 5 kilodalton peptide) occurred. Catalytic competence of the enzyme was abolished with the loss of the first (3 kilodalton) peptide.