共查询到20条相似文献,搜索用时 281 毫秒
1.
2.
3.
4.
5.
Background
Water and salt stresses are two important environmental factors that limit the germination of seeds in most ecological environments. Most studies conducted so far to address the genetic basis of the above phenomenon have used stress conditions that are much more extreme than those found in natural environments. Furthermore, although an excess of ions and water restrictions have similar osmotic effects on germination, the common and divergent signalling components mediating the effects of both factors remain unknown.Methods
The germination of seeds was compared under solutions of NaCl (50 mm) and polyethylene glycol (PEG, −0·6 MPa), that establish mild stress conditions, in 28 Arabidopsis thaliana accessions. Because Bayreuth (Bay) and Shadara (Sha) accessions showed contrasting sensitivity responses to both stresses, a quantitative trait locus (QTL) analysis was carried out using Bay × Sha recombinant inbred lines (RILs) to identify loci involved in the control of germination under mild salt and osmotic stresses.Key Results
Two loci associated with the salt sensitivity response, named SSR1 and SSR2 QTLs, and four loci for the osmotic sensitivity response, named OSR1–OSR4 QTLs, were mapped. The effects of the SSR1 QTL on toxic salt sensitivity, and the osmotic contribution of OSR1, were confirmed by heterogeneous inbred families (HIFs). Whilst the SSR1 QTL had a significant effect under a wide range of NaCl concentrations, the OSR1 QTL was confirmed only under moderate drought stress. Interestingly the OSR1 QTL also showed pleiotropic effects on biomass accumulation in response to water deficit.Conclusions
The regulation of germination under moderate salt and osmotic stresses involves the action of independent major loci, revealing the existence of loci specifically associated with the toxic component of salt and not just its osmotic effect. Furthermore, this work demonstrates that novel loci control germination under osmotic stress conditions simulating more realistic ecological environments as found by populations of seeds in nature. 相似文献6.
7.
8.
9.
10.
11.
12.
13.
Muhammad Sohail Wenguang Cao Niaz Mahmood Mike Myschyshyn Say Pham Hong Jiuyong Xie 《BMC genomics》2014,15(1)
Background
The 3′ splice site (SS) at the end of pre-mRNA introns has a consensus sequence (Y)nNYAG for constitutive splicing of mammalian genes. Deviation from this consensus could change or interrupt the usage of the splice site leading to alternative or aberrant splicing, which could affect normal cell function or even the development of diseases. We have shown that the position “N” can be replaced by a CA-rich RNA element called CaRRE1 to regulate the alternative splicing of a group of genes.Results
Taking it a step further, we searched the human genome for purine-rich elements between the -3 and -10 positions of the 3′ splice sites of annotated introns. This identified several thousand such 3′SS; more than a thousand of them contain at least one copy of G tract. These sites deviate significantly from the consensus of constitutive splice sites and are highly associated with alterative splicing events, particularly alternative 3′ splice and intron retention. We show by mutagenesis analysis and RNA interference that the G tracts are splicing silencers and a group of the associated exons are controlled by the G tract binding proteins hnRNP H/F. Species comparison of a group of the 3′SS among vertebrates suggests that most (~87%) of the G tracts emerged in ancestors of mammals during evolution. Moreover, the host genes are most significantly associated with cancer.Conclusion
We call these elements together with CaRRE1 regulatory RNA elements between the Py and 3′AG (REPA). The emergence of REPA in this highly constrained region indicates that this location has been remarkably permissive for the emergence of de novo regulatory RNA elements, even purine-rich motifs, in a large group of mammalian genes during evolution. This evolutionary change controls alternative splicing, likely to diversify proteomes for particular cellular functions.Electronic supplementary material
The online version of this article (doi:10.1186/1471-2164-15-1143) contains supplementary material, which is available to authorized users. 相似文献14.
Water stress-induced xylem hydraulic failure is a causal factor of tree mortality in beech and poplar 总被引:1,自引:0,他引:1
Têtè Sévérien Barigah Olivia Charrier Marie Douris Marc Bonhomme Stéphane Herbette Thierry Améglio Régis Fichot Frank Brignolas Hervé Cochard 《Annals of botany》2013,112(7):1431-1437
Background and Aims
Extreme water stress episodes induce tree mortality, but the physiological mechanisms causing tree death are still poorly understood. This study tests the hypothesis that a potted tree''s ability to survive extreme monotonic water stress is determined by the cavitation resistance of its xylem tissue.Methods
Two species were selected with contrasting cavitation resistance (beech and poplar), and potted juvenile trees were exposed to a range of water stresses, causing up to 100 % plant death.Key Results
The lethal dose of water stress, defined as the xylem pressure inducing 50 % mortality, differed sharply across species (1·75 and 4·5 MPa in poplar and beech, respectively). However, the relationships between tree mortality and the degree of cavitation in the stems were similar, with mortality occurring suddenly when >90 % cavitation had occurred.Conclusions
Overall, the results suggest that cavitation resistance is a causal factor of tree mortality under extreme drought conditions. 相似文献15.
16.
17.
18.
19.
20.
Luiz Fernando Goda Zuleta Claúdio de Oliveira Cunha Fabíola Marques de Carvalho Luciane Prioli Ciapina Rangel Celso Souza Fábio Martins Mercante Sergio Miana de Faria José Ivo Baldani Rosangela Straliotto Mariangela Hungria Ana Tereza Ribeiro de Vasconcelos 《BMC genomics》2014,15(1)