Patterns of endemism in the limestone flora of South African lowland fynbos

Taxonomie and biological aspects of endemism and Red Data Book status were studied amongst the limestone endemics of the lowland fynbos in the Cape Floristic Region, South Africa. Of the 110 limestone endemics, 1.8% are widely distributed in the Cape Floristic Region and 56.4% are regional endemics. Relative to flora of non-limestone lowland fynbos (n=538 species), the families which were overrepresented in terms of limestone endemics included the Ericaceae, Fabaceae, Polygalaceae, Rutaceae and Sterculiaceae. The Restionaceae was the only underrepresented family. The local limestone endemics were not significantly different from regional endemics in terms of their biological attributes. An analysis of the frequency of the biological traits associated with the limestone-endemic flora established a biological profile for a limestone endemic: a dwarf-to-low shrub with soil-stored seeds which are ant or wind dispersed. In terms of the species richness of limestone endemics, the De Hoop Nature Reserve was the hotspot within the region. Relative to the total species richness, the Hagelkraal and Stilbaai areas contained higher-than-predicted numbers of rare species. These areas require urgent attention if the unique floral diversity associated with limestone substrata within the Bredasdorp-Riversdale centre of endemism is to be conserved.     

Insect species richness tracking plant species richness in a diverse flora: gall-insects in the Cape Floristic Region, South Africa

The Cape Floristic Region (CFR) is one of the most plant-species-rich regions in the world. It is also a warm temperate region and hypothetically should have high gall-insect species richness, making it interesting to investigate the relationship between the insects of the region and the rich flora. The relationship between gall-insect species richness (GSR) and plant richness was investigated for the Fynbos and for representatives of vegetation of the whole CFR. Samples (of up to 600 plants per transect for Fynbos) of woody shrubs were investigated for the presence of galls. The species richness of these insects was quantified, as well as plant species richness for each transect. GSR for Fynbos was compared to global figures for GSR. Fynbos harboured significantly more gall-insect species than other CFR vegetation types. GSR was positively correlated with CFR plant richness. GSR also closely tracked plant richness in Fynbos. GSR was not significantly influenced by other variables (elevation and aspect), suggesting that plant richness per se was an important factor in generating GSR. Fynbos GSR is comparable to other sclerophyllous regions of high GSR globally, corroborating that this vegetation type is conducive to gall-insect diversification. There is likely to be a high percentage of gall-insect endemism in the Fynbos, as might be expected from the high host fidelity of this insect group. Received: 22 September 1997 / Accepted: 16 February 1998     

Endemism and speciation in a lowland flora from the Gape Floristic Region

Taxonomic, edaphic and biological aspects of endemism were studied in a phanerogamous flora from the Agulhas Plain, a coastal lowland area of the Cape Floristic Region. Of the 1751 species in the flora, 23.6% were regional endemics and 5.7% were local endemics. Families which were over-represented in terms of endemics included the Ericaceae, Rutaceae, Proteaceae and Polygalaceae. Under-represented families included the Poaceae, Cyperaceae, Scrophulariaceae and Orchidaceae. Highest levels of local endemism were recorded on limestone and colluvial acid sand. Sixty-nine percent of regional endemics and 85% of local endemics were confined to a single substratum. An analysis of the frequency of biological traits associated with species with different categories of endemism enabled the establishment of a biological profile of a local endemic: a dwarf to low, non-sprouting shrub with soil stored seeds which are ant-dispersed and/or form a symbiotic relationship with microbes. It is argued that lineages with these characteristics are vulnerable to severe population reduction or even local extinction. An effect of this would be the promotion of rapid, edaphic speciation as a result of catastrophic selection. Thus, certain traits (e.g. non-sprouting) prevail or even predominate in the flora not because of any adaptive advantage but because high speciation rates of lineages which possess them, overwhelm low survival rates.     

Marine macroalgal biodiversity hotspots: why is there high species richness and endemism in southern Australian marine benthic flora?

The southern Australian marine macroalgal flora has the highest levels of species richness and endemism of any regional macroalgal flora in the world. Analyses of species composition and distributions for the southern Australian flora have identified four different floristic elements, namely the southern Australian endemic element, the widely distributed temperate element, the tropical element and a cold water element. Within the southern Australian endemic element, four species distribution patterns are apparent, thought to largely result from the Jurassic to Oligocene fragmentation of East Gondwana, the subsequent migration of Tethyan ancestors from the west Australian coast and the later invasion of high latitude Pacific species. Climatic deterioration from the late Eocene to the present is thought responsible for the replacement of the previous tropical south coast flora by an endemic temperate flora which has subsequently diversified in response to fluctuating environmental conditions, abundant rocky substrata and substantial habitat heterogeneity. High levels of endemism are attributed to Australia's long isolation and maintained, as is the high species richness, by the lack of recent mass extinction events. The warm water Leeuwin Current has had profound influence in the region since the Eocene, flowing to disperse macroalgal species onto the south coast as well as ameliorating the local environment. It is now evident that the high species richness and endemism we now observe in the southern Australian marine macroalgal flora can be attributed to a complex interaction of biogeographical, ecological and phylogenetic processes over the last 160 million years.     

Patterns in the diversity and endemism of extant Eocene age lineages across southern Africa

Southern Africa boasts a wealth of endemic fauna and flora, comprising both massive recent radiations such as those characteristic of the Cape flora, and solitary ancient species such as the peculiar desert gymnosperm Welwitschia. This study was undertaken to identify ancient biological lineages (tetrapod and vascular plant lineages of Eocene age or older) endemic to southern Africa, and to map their distribution across the region. Twenty‐seven (17 plant and ten animal) lineages were identified, and distribution maps were generated for each of them across 74 operational geographic units, which were then combined into total endemism and corrected weighted endemism per unit area. Total endemism peaked along South Africa's coast and Great Escarpment, but in the case of weighted endemism high values were also recorded along other portions of the Great Escarpment further north. A review of the lineages sister to southern African ancient endemic lineages showed that these are often globally widespread, and many of them differ substantially from the southern African ancient lineages in terms of morphology and ecology. The mechanisms of ancient lineage survival in the region are discussed, and their importance for conservation in southern Africa is emphasised.     

Assessing endemism at multiple spatial scales, with an example from the Australian vascular flora

Aim  To develop an approach for assessing the spatial scale of centres of endemism among species level data.
Location Australia.
Methods  Endemism is inherently scale dependent. Therefore, the Corrected Weighted Endemism (CWE) index used by Crisp et al. [ J. Biogeogr. (2001)28:183] is extended to account for species samples in local neighbourhoods as a Spatial CWE index. This then allows an analysis of how the degree of endemism of a location (cell) changes with spatial scale. The quality of the Spatial CWE index results are assessed using three spatial randomizations at the species level with and without preserving species richness and distributional patterns. We show that CWE is equivalent to beta diversity and predict that it should show high rates of change around centres of endemism.
Results  Similar patterns to those found by Crisp et al. using a data set of vascular flora from Australia are retrieved, but the extent to which they are scale dependent is more easily identified. For example, the Central Australian centre discounted by Crisp et al. is identified when a three-cell radius neighbourhood is used. However, the level of endemism in this centre is no greater than in the margins of many of the coastal centres of endemism. Most of the identified centres of endemism are better than random at all scales and are increasingly so as the spatial scale increases. As predicted, the highest rate of change in Spatial CWE (beta diversity) is most often between zero- and one-cell radius neighbours in most centres of endemism.
Main conclusions  The explicit incorporation of geographical space in analyses allows for a greater understanding of the scale-dependence of phenomena, in this case endemism and beta diversity.     

Species richness and complementarity of beetle faunas in a mediterranean-type biodiversity hotspot

Regions of mediterranean-type climate represent most extra-tropical biodiversity hotspots, being both highly diverse and highly endangered. Though renowned for their plant richness, these regions’ insects constitute the bulk of their alpha diversities. Data on insect distribution and rarity are generally lacking for such regions, and are often considered unattainable. Intensive field inventories combined with statistical extrapolation methods can provide a sufficient understanding of alpha, beta, and gamma diversity components for application to conservation planning. These are essential to assessing the adequacy of a regional reserve network for the conservation of insect diversity. Here the beetle faunas of three protected areas spanning three major ecoregions in the California Floristic Province were inventoried and analyzed for species richness, complementarity, and uniqueness. These surveys produced collectively nearly 1,200 species from all three sites, estimated to be about 80% of their total faunas. Diversity was highly partitioned among sites, no one site containing more than 60% of the species. Dissimilarity was moderate to high for all comparisons, and all sites contained >40% unique species. Comparison of these results with those based on species of co-occurring plants reveal incongruent species richness but congruent similarities among sites. These results provide quantitative support to the perception that mediterranean insect faunas show high spatial variability. Along with online specimen level data on distribution, rarity, and seasonality, these results will help speed the incorporation of insect data into serious conservation planning.     

An assessment of endemism and species richness patterns in the Australian Anura

Aim To assemble a continental‐scale data set of all available anuran records and investigate trends in endemism and species richness for the Anura. Location Continental Australia. Methods 97,338 records were assembled, covering 75% of the continent. A neighbourhood analysis was applied to recorded locations for each species to measure richness and endemism for each half‐degree grid square (c. 50 km) in the continent. This analysis was performed for all anurans, and also for each of the three main anuran families found in Australia. A Monte Carlo simulation was used to test a null hypothesis that observed centres of endemism could result simply from an unstructured overlapping of species ranges of different sizes. Results Eleven main centres of anuran endemism were identified, the most important being the Wet Tropics and the south‐west near Bunbury‐Augusta and near Walpole. With the exception of south‐western Australia, all of the identified significant endemic centres are in the northern half of the continent. The regions identified as significant for endemism differed from those identified for species richness and are more localized. Species richness is greatest in the Wet Tropics and the Border Ranges. High species richness also occurs in several areas not previously identified along the east and northern coasts. Main conclusions Weighted endemism provides a new approach for determining significant areas for anuran conservation in Australia and areas can be identified that could be targeted for beneficial conservation gains. Patterns in endemism were found to vary markedly between the three main anuran families, and south‐eastern Australia was found to be far less significant than indicated by previous studies. The need for further survey work in inland Australia is highlighted and several priority areas suggested. Our results for species richness remain broadly consistent with trends previously observed for the Australian Anura.     

Phylogeny and evolution of the South African genus Metalasia (Asteraceae–Gnaphalieae) inferred from molecular and morphological data

Metalasia is a genus in tribe Gnaphalieae (Asteraceae), endemic to South Africa and with its main distribution in the Cape Floristic Region. The genus comprises 57 species and, with a number of closely related genera, it constitutes the ‘Metalasia clade’. A species‐level phylogenetic analysis is presented, based on DNA sequences from two nuclear (internal and external transcribed spacer: ITS, ETS) and two plastid (psbA‐trnH, trnL‐trnF) regions together with morphological data. Analyses combining molecular and morphological data attempt not only to resolve species interrelationships, but also to detect patterns in character evolution. Phylogenetic analyses corroborate our earlier study and demonstrate that Metalasia is formed of two equally sized, well‐supported sister groups, one of which is characterized by papillose cypselas. The results differ greatly from earlier hypotheses based on morphology alone, as few morphological characters support the phylogenetic patterns obtained. The two clades of Metalasia do, however, appear to differ in distribution, corresponding to the different rainfall regimes of South Africa. Analyses show a few taxa to be problematic; one example is the widely distributed M. densa which appears to be an intricate species complex. © 2013 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 174 , 173–198.     

The Southern African orchid flora: composition, sources and endemism

Aim The Southern African orchid flora is taxonomically well known, but the biogeographical and diversity patterns have not yet been analysed. In particular, we want to establish whether (a) it is, like the Southern African flora in general, more diverse than would be expected from its latitude and area; (b) it is an African flora, or whether it contains palaeoendemic relicts of a Gondwanan orchid flora; (c) the diversity and endemism in the orchid flora is concentrated in particular biomes and habitat types; and (d) the patterns of endemism in the flora can be accounted for by current environmental parameters, or whether we need to invoke historical explanations. Location Southern Africa. Methods We used the recent floristic account of the Southern African orchids, in conjunction with a data base of over 14,642 herbarium records, to assign the species and subspecies of Southern African orchids to biomes, habitats, and clades. We explored the relationship between the number and endemism of entities (species, subspecies and varieties) and the biomes and habitats. We compared the richness of this flora with that of 31 other regions from all continents and latitudes, to establish whether the Southern African orchid flora is richer or poorer than expected. We assigned the Southern African orchid species to 16 monophyletic clades and mapped the global distribution of these clades to establish the continental affinities of the flora. Main conclusions The Southern African orchid flora is not any more diverse than could be expected from its latitude or area, while the two tropical African floras included were less diverse than expected. Latitude is an excellent predictor of regional orchid species richness; this might indicate that available habitat is more important for orchid diversity than gross area available, since latitude is probably correlated with the extent of suitable habitat. The Southern African orchid flora is clearly an African flora, since all clades are also found in tropical Africa, while many of them are absent from the Americas or Asia. Conversely, while most African orchid clades are also found in Southern Africa, both the Americas and Asia contain many clades absent from Africa. The distribution of orchid entities among the biomes in Southern Africa is very uneven, with two of the seven biomes totally devoid of orchids. Habitats and biomes that have no equivalent in tropical Africa are high in endemism, and habitats and biomes which are also well developed in tropical Africa are low in endemism. Endemism appears largely explained in terms of modern habitats. However, two patterns (the high endemism in the Succulent Karoo and the lack of endemism in the southern Cape among epiphytic orchids) may also be explained in terms of Quaternary climatic changes.     

山东植物区系中的特有现象

对山东植物区系中的特有现象进行了初步研究。全省共有５３个特有种,可分为４种分布式样即全省布型、鲁中南－山东半岛间断分布型、鲁中南山地分布和山东半岛分布型;提出了山东植物区的两个特有现象中心,即崂山昆嵛山中心和泰山蒙山中心,并初步探讨了其形成原因。     

Species versus genotypic diversity of a nitrogen-fixing plant functional group in a metacommunity

Exploring species and genetic diversity interactions provides new opportunities for furthering our understanding of the ecology and evolution of population and community dynamics, and for predicting responses of ecosystems to environmental change. Theory predicts that species diversity within communities and genetic diversity within populations will covary positively, because either species and genetic diversity interact synergistically or they respond in parallel fashion to common habitat conditions. We tested the hypothesis of positive covariation between species and genotypic diversity in a metacommunity of the species-rich southwest Australian flora. We hypothesised that the connection between genotypic diversity and species diversity is strong within functional groups, but weak or non-existent if the species considered extend beyond the functional group. We show that allelic richness of Daviesia triflora, an ant-dispersed pea, covaries positively with the species richness of six co-occurring nitrogen-fixing legume species. No pattern can be detected between allelic richness of D. triflora and species richness of ant-dispersed species when four non-legumes are added. We also show that genetic diversity of D. triflora is not governed by the same environmental factors that determine the presence of a group of large-shrub/small-tree species in the same metacommunity. This study shows that species and genetic diversity covariation are more likely to be confined to within, rather than between, plant functional groups.     

Moss endemism in the Mexican flora

Although the moss flora of Mexico consists of nearly 1000 species, only 77 are endemic. The country has many poorly collected or unexplored areas, but the number of endemic mosses is not expected to undergo a substantial increase; percent endemism has in fact decreased with taxonomic revisions and monographs and better exploration in other countries. Literature and herbarium records (n?=?584) were used to obtain an updated list of endemic mosses and their state distribution in Mexico. Cluster analysis and mapping indicate that there are three main areas of endemism: Lowland areas in various states, the mountain area along 19–20°N lat., and the highlands in Oaxaca and Chiapas. Similarity by province shows that Trans-Mexican Volcanic Belt, Sierra Madre Oriental, Chihuahuan Desert, and Sierra Madre del Sur have the highest numbers of endemic species. Five monotypic genera and 76 species (including two infraspecific taxa), many of which have comparatively narrow geographical ranges, suggest that speciation is recent, that species have had little time to disperse, and were formed by Pleistocene environmental climates in the highlands; older speciation may be represented by widespread disjunct species that still are found in the highlands of Mexico.     

Species richness and endemism in the Usambara mountain forests, Tanzania

The East Usambara Mountain forests constitute what is probably one of the richest biological communities in Africa in terms of plant and animal species numbers and endemic taxa. This review presents brief accounts of the flora and of three invertebrate and four vertebrate groups and shows the percentage endemic taxa to vary from 2% (mammals) to 95% (millipedes) as a proportion of the true forest species.
Notes are given on the geology, soils, climate and present land use of the Usambaras. Biological richness is considered to be due to long periods of isolation and geological stability coupled with periods of species immigration during times of re-establishment of a continuous forest cover. The nature of the endemic elements is briefly discussed.
Evidence is given to show that the forests are subject to increasing pressure from legal and illegal encroachment due to agriculture (tea, cardamon, subsistence) and forestry timber operations. Air photograph analysis shows a forest decrease of some 50% in the vicinity of Amani from 1954 to 1976.
The low conservation status of most forest reserves and the lack of detailed knowledge on the distribution, status and biology of the endemic species means present conservation efforts are poor and haphazard. This review calls for greatly increased research inputs and a complete halt to all exploitation of natural forest areas until a long term conservation land use plan can be implemented.     

Species richness and endemism in the Usambara mountain forests,Tanzania

The East Usambara Mountain forests constitute what is probably one of the richest biological communities in Africa in terms of plant and animal species numbers and endemic taxa. This review presents brief accounts of the flora and of three invertebrate and four vertebrate groups and shows the percentage endemic taxa to vary from 2% (mammals) to 95% (millipedes) as a proportion of the true forest species. Notes are given on the geology, soils, climate and present land use of the Usambaras. Biological richness is considered to be due to long periods of isolation and geological stability coupled with periods of species immigration during times of re-establishment of a continuous forest cover. The nature of the endemic elements is briefly discussed. Evidence is given to show that the forests are subject to increasing pressure from legal and illegal encroachment due to agriculture (tea, cardamon, subsistence) and forestry timber operations. Air photograph analysis shows a forest decrease of some 50% in the vicinity of Amani from 1954 to 1976. The low conservation status of most forest reserves and the lack of detailed knowledge on the distribution, status and biology of the endemic species means present conservation efforts are poor and haphazard. This review calls for greatly increased research inputs and a complete halt to all exploitation of natural forest areas until a long term conservation land use plan can be implemented.     

西南地区壳斗科物种丰富度和特有性分布格局模拟及其环境解释

如何准确地模拟物种宏观丰富度格局和特有性中心是生物多样性保护工作的重点,也是生物地理学的热点话题.西南地区是我国壳斗科植物最丰富的地区之一,但物种多样性格局及环境驱动机制尚不清楚.本研究基于西南地区161种壳斗科植物7258个分布点位数据,利用点格局法和物种分布模型两种方式构建了物种丰富度、加权特有性指数和校正加权特有...     

Do Mediterranean‐type ecosystems have a common history?—Insights from the Buckthorn family (Rhamnaceae)

Mediterranean‐type ecosystems (MTEs) are remarkable in their species richness and endemism, but the processes that have led to this diversity remain enigmatic. Here, we hypothesize that continent‐dependent speciation and extinction rates have led to disparity in diversity between the five MTEs of the world: the Cape, California, Mediterranean Basin, Chile, and Western Australia. To test this hypothesis, we built a phylogenetic tree for 280 Rhamnaceae species, estimated divergence times using eight fossil calibrations, and used Bayesian methods and simulations to test for differences in diversification rates. Rhamnaceae lineages in MTEs generally show higher diversification rates than elsewhere, but speciation and extinction dynamics show a pattern of continent‐dependence. We detected high speciation and extinction rates in California and significantly lower extinction rates in the Cape and Western Australia. The independent colonization of four of five MTEs may have occurred conterminously in the Oligocene/Early Miocene, but colonization of the Mediterranean Basin happened later, in the Late Miocene. This suggests that the in situ radiations of these clades were initiated before the onset of winter rainfall in these regions. These results indicate independent evolutionary histories of Rhamnaceae in MTEs, possibly related to the intensity of climate oscillations and the geological history of the regions.