How past and present influence the foraging of clonal plants?

Clonal plants spreading horizontally and forming a network structure of ramets exhibit complex growth patterns to maximize resource uptake from the environment. They respond to spatial heterogeneity by changing their internode length or branching frequency. Ramets definitively root in the soil but stay interconnected for a varying period of time thus allowing an exchange of spatial and temporal information. We quantified the foraging response of clonal plants depending on the local soil quality sampled by the rooting ramet (i.e. the present information) and the resource variability sampled by the older ramets (i.e. the past information). We demonstrated that two related species, Potentilla reptans and P. anserina, responded similarly to the local quality of their environment by decreasing their internode length in response to nutrient-rich soil. Only P. reptans responded to resource variability by decreasing its internode length. In both species, the experience acquired by older ramets influenced the plastic response of new rooted ramets: the internode length between ramets depended not only on the soil quality locally sampled but also on the soil quality previously sampled by older ramets. We quantified the effect of the information perceived at different time and space on the foraging behavior of clonal plants by showing a non-linear response of the ramet rooting in the soil of a given quality. These data suggest that the decision to grow a stolon or to root a ramet at a given distance from the older ramet results from the integration of the past and present information about the richness and the variability of the environment.     

Could plant hormones be the basis of maturation indices in Pinus radiata?

Maturation and phase change in woody plants are developmental processes at present poorly understood, especially from a physiological point of view. Maturation indices, such as phytohormones, could be used to understand more about the events that accompany the increase in the developmental state and to choose optimal conditions in order to improve forest programs and make them more profitable. In order to determine this putative index, the contents in abscisic acid-like substances (ABA-like), indole-3-acetic acid (IAA) and several cytokinins (Cks) were analysed in terminal and axillary buds of Pinus radiata trees with different developmental states to compare their phytohormonal status. An increase in the content of some zeatin-type (Z-type) Cks, and a decrease in isopentenyladenine-type (iP-type) Cks levels throughout maturation were shown both in terminal and axillary buds. This fact allowed us to consider the ratio iP-type/Z-type Cks, which decreased in parallel with the increasing developmental state of the tree, as a maturation index. According to the results, ABA-like compounds and IAA contents could not be considered as a maturation index in Pinus radiata, even though similar patterns were in fact found between the two kinds of buds.     

Conservation In vitro of threatened plants—Progress in the past decade

Summary In vitro techniques have found increasing use in the conservation of threatened plants in recent years and this trend is likely to continue as more species face risk of extinction. The Micropropagation Unit at Royal Botanic Gardens, Kew, UK (RBG Kew) has an extensive collection of in vitro plants including many threatened species from throughout the world. The long history of the unit and the range of plants cultured have enabled considerable expertise to be amassed in identifying the problems and developing experimental strategies for propagation and conservation of threatened plants. While a large body of knowledge is available on the in vitro culture of plants, there are limited publications relating to threatened plant conservation. This review highlights the progress in in vitro culture and conservation of threatened plants in the past decade (1995–2005) and suggests future research directions. Works on non-threatened plants are also included wherever methods have applications in rare plant conservation. Recalcitrant plant materials collected from the wild or ex situ collections are difficult to grow in culture. Different methods of sterilization and other treatments to establish clean material for culture initiation are reviewed. Application of different culture methods for multiplication, and use of unconventional materials for rooting and transplantation are reviewed. As the available plant material for culture initiation is scarce and in many cases associated with inherent problems such as low viability and endogenous contamination, reliable protocols on multiplication, rooting, and storage methods are very important. In this context, photoautotrophic micropropagation has the potential for development as a routine method for the in vitro conservation of endangered plants. Long-term storage of material in culture is challenging and the potential applications of cryopreservation are significant in this area. Future conservation biotechnology research and its applications must be aimed at conserving highly threatened, mainly endemic, plants from conservation hotspots.     

Could Candida dubliniensis be involved in lung fungus balls?

We describe a case of cavitary pneumonia due to Candida dubliniensis along with fungemia due to Candida kefyr in a leukemic patient. This is the first case of C. dubliniensis isolated in our laboratory. The identification was performed by phenotypic and molecular methods such as thermotolerance test, carbohydrate fermentation and polymerase chain reaction.     

Could oxidative stress be a factor in neurodevelopmental disorders?

There is evidence of co-morbidity in the neurodevelopmental disorders and they display depletion of polyunsaturated fatty acids (PUFAs) in their plasma and red cell membranes. This suggests an abnormal fatty acid metabolism, which may affect cell signalling and synthesis of eicosanoids. This common feature in the neurodevelopmental disorders may be genetic in origin: however, oxidative stress may also contribute to decreased PUFAs found in these disorders.     

Arthropods associated with medicinal plants in coastal South Carolina

Arthropods were sampled from feverfew [Tanacetum parthenium （L.） Schultz- Bip], Echinacea purpurea （L.） Moench, Echinacea pallida （Nutt.） Nutt., Valeriana officinalis L., and St. John＇s wort （Hypericum perforatum L.） during 1998-2001. In addition, arthropods were sampled on tansy （Tanacetum vulgare L.） from 2001-2004. In general, 50-60 arthropod species where collected and identified among all of the medicinal plant species. Among the predators, Orius insidiosus （Say） （Hemiptera： Anthocoridae）, Geocoris punctipes （Say） （Hemiptera： Lygaeidae） and spiders were most abundant from 1998-2004. The three-cornered alfalfa hopper, Spissistilus festinus （Say）, was the most abundant herbivore found from 1998 to 2001. Orius insidiosus and G. punctipes were 3-4 times more abundant on T. parthenium than on any other medicinal plant species. Based on the numbers of predatory arthropods found on T. parthenium, this crop could be suitable as a companion or ＂banker＂ plant to attract and maintain populations of predators, especially O. insidiosus and G. punctipes. Whitefly nymphs attacked by predators with piercing/sucking mouthparts are easily identified using a microscope because of the general appearance of the carcass left by the predators. Thus, populations of predators on T. parthenium suppressed Bemisia tabaci populations on E. purpurea when these crops were planted as companion crops.     

Role of PRMTs in cancer: Could minor isoforms be leaving a mark?

Protein arginine methyltransferases(PRMTs) catalyze the methylation of a variety of protein substrates, many of which have been linked to the development, progression and aggressiveness of different types of cancer. Moreover, aberrant expression of PRMTs has been observed in several cancer types. While the link between PRMTs and cancer is a relatively new area of interest, the functional implications documented thus far warrant further investigations into its therapeutic potential. However, the expression of these enzymes and the regulation of their activity in cancer are still significantly understudied. Currently there are nine main members of the PRMT family. Further, the existence of alternatively spliced isoforms for several of these family members provides an additional layer of complexity. Specifically, PRMT1, PRMT2, CARM1 and PRMT7 have been shown to have alternative isoforms and others may be currently unrealized. Our knowledge with respect to the relative expression and the specific functions of these isoforms is largely lacking and needs attention. Here we present a review of the current knowledge of theknown alternative PRMT isoforms and provide a rationale for how they may impact on cancer and represent potentially useful targets for the development of novel therapeutic strategies.     

Could antifungal lock be useful in the management of candidiasis linked with catheters?

Fungal biofilms associated with inserted medical devices such as catheters, represent a major risk factor for candidemia. In addition, these biofilm yeasts show a decreased susceptibility to antifungal agents. Recently, a new therapeutic approach has emerged, the "lock therapy", based on the use of high concentrations of antimicrobials, instilled into the lumen of the catheter and left in place for 8 to 12 h. In?vitro or in?vivo studies have evaluated the interest of antifungal locks using amphotericin B, an azole or echinocandins. The promising results will permit us to discuss the relevance of this technique.     

Geographical patterns of dominant bivalves and a polychaete in Europe: no metapopulations in the marine coastal zone?

The genetic diversity, differentiation and performance of some dominant invertebrates in the marine coastal zone of Europe are reviewed in order to discuss the use of the metapopulation concept in the marine coastal realm. A consistently high genetic diversity of the species studied (mussels of the Mytilus edulis complex, Baltic clams Macoma balthica and lugworms Arenicola marina), a low differentiation and an almost uniform ecophysiological performance (determined by growth, maximum length, level reserve constituents or stress resistance) all along the coast of Europe do not support the use of the metapopulation concept. Electronic Publication     

Could TCTP contribute to Armin Braun's paradigm of tumor reversion in plants?

Comment on: Brioudes F, et al. Proc Natl Acad Sci USA 2010; 107:16384-9.     

Locality or habitat? Exploring predictors of biodiversity in Amazonia

Amazonia is an environmentally heterogeneous and biologically megadiverse region, and its biodiversity varies considerably over space. However, existing knowledge on Amazonian biodiversity and its environmental determinants stems almost exclusively from studies of macroscopic above‐ground organisms, notably vertebrates and trees. In contrast, diversity patterns of most other organisms remain elusive, although some of them, for instance microorganisms, constitute the overwhelming majority of taxa in any given location, both in terms of diversity and abundance. Here, we use DNA metabarcoding to estimate prokaryote and eukaryote diversity in environmental soil and litter samples from 39 survey plots in a longitudinal transect across Brazilian Amazonia using 16S and 18S gene sequences, respectively. We characterize richness and community composition based on operational taxonomic units (OTUs) and test their correlation with longitude and habitat. We find that prokaryote and eukaryote OTU richness and community composition differ significantly among localities and habitats, and that prokaryotes are more strongly structured by locality and habitat type than eukaryotes. Our results 1) provide a first large‐scale mapping of Amazonian soil biodiversity, suggesting that OTU richness patterns might follow substantially different patterns from those observed for macro‐organisms; and 2) indicate that locality and habitat factors interact in determining OTU richness patterns and community composition. This study shows the potential of DNA metabarcoding in unveiling Amazonia's outstanding diversity, despite the lack of complete reference sequence databases for the organisms sequenced.     

How bad are invaders in coastal waters? The case of the American slipper limpet Crepidula fornicata in western Europe

Introduced species are assumed to exert a variety of negative ecological effects in their new environments. However, rigid studies on such effects are still rare. Using a case study we exemplify pitfalls and obstacles for research on ecological effects of invaders and highlight the need for a concise framework. The suspension feeding gastropod Crepidula fornicata was accidentally introduced with American oysters to Europe and was soon after defamed as an ‘oyster pest’ although no evidence was provided in justification. Recently, small-scale experiments with C. fornicata and the Pacific oyster Crassostrea gigas failed to prove competition. As an epizootic, however, C. fornicata is impeding native mussels Mytilus edulis but at the same time provides protection against starfish predation. It also may serve as a sink for infectious trematode parasites and hence be beneficial for bivalve basibionts. Another positive effect of C. fornicata, especially at the coast of France where it is superabundant, may be that it causes a shift of phytoplankton blooms from toxic flagellates to diatoms. The multiple interactions with recipient coastal ecosystems result in a complex interplay of negative as well as positive effects of the invader on native biota. Positive effects of invaders might occur with the same frequency as negative ones, and the general prejudice that introduced species exert per se a negative effect may dictate the outcome of research. We argue that considering both, negative as well as positive effects of an introduced species is needed to eventually enable us to evaluate the overall effect of an invasion on recipient ecosystems. Besides pointing to the importance of positive effects, this case study also shows that research on effects of introduced species should (1) be species specific, (2) consider different spatial scales, (3) clarify which stage of an invasive process is under observation and (4) clearly distinguish between ecological effects, human-relevant impacts and the ethical judgment of both. A concise framework for research on ecological effects of introduced species – which still has to be developed – should incorporate these aspects.     

Could a dysfunction of ferritin be a determinant factor in the aetiology of some neurodegenerative diseases?

Background

The concentration of iron in the brain increases with aging. Furthermore, it has also been observed that patients suffering from neurological diseases (e.g. Parkinson, Alzheimer…) accumulate iron in the brain regions affected by the disease. Nevertheless, it is still not clear whether this accumulation is the initial cause or a secondary consequence of the disease. Free iron excess may be an oxidative stress source causing cell damage if it is not correctly stored in ferritin cores as a ferric iron oxide redox-inert form.

Scope

Both, the composition of ferritin cores and their location at subcellular level have been studied using analytical transmission electron microscopy in brain tissues from progressive supranuclear palsy (PSP) and Alzheimer disease (AD) patients.

Major conclusions

Ferritin has been mainly found in oligodendrocytes and in dystrophic myelinated axons from the neuropili in AD. In relation to the biomineralization of iron inside the ferritin shell, several different crystalline structures have been observed in the study of physiological and pathological ferritin. Two cubic mixed ferric–ferrous iron oxides are the major components of pathological ferritins whereas ferrihydrite, a hexagonal ferric iron oxide, is the major component of physiological ferritin. We hypothesize a dysfunction of ferritin in its ferroxidase activity.

General significance

The different mineralization of iron inside ferritin may be related to oxidative stress in olygodendrocites, which could affect myelination processes with the consequent perturbation of information transference.     

Could glucose be a proaging factor?

There is an ever-increasing scientific interest for the interplay between cell's environment and the aging process. Although it is known that calorie restriction affects longevity, the exact molecular mechanisms through which nutrients influence various cell signalling/modulators of lifespan remain a largely unresolved issue. Among nutrients, glucose constitutes an evolutionarily stable, precious metabolic fuel, which is catabolized through glycolytic pathway providing energy in the form of ATP and consuming NAD. Accumulating evidence shows that among the important regulators of aging process are autophagy, sirtuin activity and oxidative stress. In light of recent work indicating that glucose availability decreases lifespan whilst impaired glucose metabolism extends life expectancy, the present article deals with the potential role of glucose in the aging process by regulating - directly through its metabolism or indirectly through insulin secretion - autophagy, sirtuins as well as other modulators of aging like oxidative stress and advanced glycation end-products (AGEs).