High connectivity in the deepwater snapper Pristipomoides filamentosus (Lutjanidae) across the Indo-Pacific with isolation of the Hawaiian archipelago

In the tropical Indo-Pacific, most phylogeographic studies have focused on the shallow-water taxa that inhabit reefs to approximately 30 m depth. Little is known about the large predatory fishes, primarily snappers (subfamily Etelinae) and groupers (subfamily Epinephelinae) that occur at 100-400 m. These long-lived, slow-growing species support fisheries across the Indo-Pacific, yet no comprehensive genetic surveys within this group have been conducted. Here we contribute the first range-wide survey of a deepwater Indo-Pacific snapper, Pristipomoides filamentosus, with special focus on Hawai'i. We applied mtDNA cytochrome b and 11 microsatellite loci to 26 samples (N=1,222) collected across 17,000 km from Hawai'i to the western Indian Ocean. Results indicate that P. filamentosus is a highly dispersive species with low but significant population structure (mtDNA Φ(ST)=0.029, microsatellite F(ST)=0.029) due entirely to the isolation of Hawai'i. No population structure was detected across 14,000 km of the Indo-Pacific from Tonga in the Central Pacific to the Seychelles in the western Indian Ocean, a pattern rarely observed in reef species. Despite a long pelagic phase (60-180 days), interisland dispersal as adults, and extensive gene flow across the Indo-Pacific, P. filamentosus is unable to maintain population connectivity with Hawai'i. Coalescent analyses indicate that P. filamentosus may have colonized Hawai'i 26 K-52 K y ago against prevailing currents, with dispersal away from Hawai'i dominating migration estimates. P. filamentosus harbors low genetic diversity in Hawai'i, a common pattern in marine fishes, and our data indicate a single archipelago-wide stock. However, like the Hawaiian Grouper, Hyporthodus quernus, this snapper had several significant pairwise comparisons (F(ST)) clustered around the middle of the archipelago (St. Rogatien, Brooks Banks, Gardner) indicating that this region may be isolated or (more likely) receives input from Johnston Atoll to the south.     

Population biology and stock assessment of Pristipomoides filamentosus on the Mahe Plateau, Seychelles

The population of P. filamentosus around the periphery of the Mahe Plateau was studied using data derived from commercial handline fishing operations between November 1989 and December 1990. Sex ratio was close to one. Fork length was in the range 25.6–79.8 cm: at first sexual maturity, 36–38 cm for females and 40–42 cm for males. Spawning occurred from October to April peaking between February and April and in November.
The length ( f.l. , cm)–weight (kg) relationship was W =0.00005353 × f.l. ^2.7004. The von Bertalanffy growth parameters, estimated from length frequency data, were K =0.2875 and L _inf=81.7 cm. Mortality rates, estimated from length converted catch curve analysis, were Z =0.811, F =0.277 with M =0.534 derived from Pauly's empirical formula. Jones' length cohort analysis gave an estimate of F= 0.294 for the fully exploited part of the stock, and a density of 2.59 t km⁻² for the periphery of the plateau from 75 to 150 m depth. The Lesley constant catchability model, applied to the results of intensive fishing around isolated banks, derived a mean density estimate of 2.99t km⁻². The sustainable yield was estimated to be 233–268 tonnes per annum and the catch in 1990 was 200 tonnes.     

Age, growth and reproduction of the humpback red snapper Lutjanus gibbus off Ishigaki Island, Okinawa

The humpback red snapper Lutjanus gibbus (Lutjanidae) is an important species for fisheries in the Kagoshima and Okinawan region of Japan. The present study estimated the age, growth and reproduction of this lutjanid species in the waters around Ishigaki Island, southern part of Okinawa. An opaque zone was formed on the otolith every year, and this formation correlated with their spawning season; these zones were identified as annual rings. Maximum ages of 21 and 24 years were observed for males and females, respectively. The von Bertalanffy growth parameters clarifying the age–fork length relationship were as follows: L _∞ = 390.5 mm, K = 0.210 year⁻¹ and t ₀ = −1.88 year for males, and L _∞ = 303.4, K = 0.256 year⁻¹ and t ₀ = −3.05 year for females. The main spawning season was estimated as between May and October, since greater values of gonadosomatic index for females as well as maturation oocytes and/or postovulatory follicles were observed during those six months.     

Age and growth of the sandbar shark, Carcharhinus plumbeus, in Hawaiian waters through vertebral analysis

Age and growth estimates were determined for the sandbar shark, Carcharhinus plumbeus, from Oahu, Hawaii in the central Pacific Ocean. Age estimates were obtained through vertebral centra analysis of 187 sharks. We verified our age estimates through marginal increment analysis of centra and oxytetracycline marking methods of at liberty sandbar sharks. Sizes of sampled sharks ranged from 46 to 147 cm pre-caudal length. Four growth models were fitted to length-at-age data; two forms of the von Bertalanffy growth model, the Gompertz growth model, and a logistic growth model. Males and females exhibited statistically significant differences in growth, indicating that females grow slower and attain larger sizes than males. Growth parameter estimates revealed slower growth rates than previously estimated (based on captive specimens) for Hawaiian sandbar sharks. The von Bertalanffy growth model using empirical length-at-birth provided the best biological and statistical fit to the data. This model gave parameter estimates of L _∞ = 138.5 cm PCL and k = 0.12 year⁻¹ for males and L _∞ = 152.8 cm PCL, k = 0.10 year⁻¹ for females. Male and female sandbar sharks mature at approximately 8 and 10 years of age, respectively.     

Age,growth, and reproductive biology of blacktail snapper,Lutjanus fulvus,around the Yaeyama Islands,Okinawa, Japan

Age, growth, and reproductive characteristics of blacktail snapper, Lutjanus fulvus, which is a commercial fish species, were investigated using 322 specimens (40–332 mm in fork length) caught around the Yaeyama Islands, Okinawa, Japan. Spawning season was estimated to be from April to October, and spawning was confirmed around the full moon and the last quarter moon. Age determination using sectioned otoliths revealed that ages ranged from 0 to 34 years and the majority was ≥ 3 years. Parameters of the von Bertalanffy growth function were estimated to be L _∞  = 270 mm, k = 0.40, and t ₀  = ?0.48 years for females, and 257 mm, 0.44, and ?0.42 years for males. Initial growth was rapid during the first 3 years, attaining over 200 mm for both sexes, and then females grew larger than males. Sizes (ages) at the first sexual maturity were 225 mm (4 years) for females and 207 mm (3 years) for males. The wide range of age composition in catch with majority of ≥3 years old implied that the current fishing effort to harvest was not sufficiently large enough to collapse the stock immediately.     

Age and growth of Lutjanus kasmira (Forskål) in Hawaiian waters

The growth of Hawaiian taape, Lutjanus kasmira , was studied by examining otoliths and by analysing length-frequency distribution. Annual hyaline and opaque markings were visible in whole mounts of sagittae, which were verified by enumeration of daily increments with a scanning electron microscope (SEM) and through marginal increment analysis. The von Bertalanffy growth curve was fitted to the data, resulting in: where t. l . is total length (cm) and t is age (years). SEM observations revealed that the slowgrowth hyaline zones were composed of daily increments too small (0.4–0.8 μm) to be resolved optically. Thus, age estimates derived by numerically integrating otolith growth rate data obtained with a light microscope showed a negative bias, resulting in overestimation of growth rates. Parameter estimates obtained from three different types of length-frequency analysis were also unstable. This was due, at least in part, to differences in the size composition of fish sampled with different fishing gears and from different depths.
The growth rate registered in Hawaii falls within the reported growth coefficients of lutjanids, whereas it is one of the highest in the Pacific and clearly higher than a deep-water lutjanid species growth in Hawaii. Probably, this high growth rate may have been enhanced by the relative lack of competitors in the depauperate Hawaiian marine fish community.     

Age at recruitment of Hawaiian freshwater gobies

Synopsis Very little is known about the dynamics of native Hawaiian stream fishes. Five species are restricted, as adults, to freshwater streams and estuaries on the major islands of the Hawaiian archipelago. This paucity of information is partly due to difficulties inherent in determination of age and subsequent determinations of life history characteristics. In the present study, we determined the age of newly recruited Hawaiian gobies,Stenogobius genivittatus andAwaous stamineus using otolith microtechniques. Internal otolith increments were enumerated using scanning electron microscopy (SEM). Increments of newly recruited juveniles were deposited on a daily basis as validated through a marking study. Results showed recruitment at an average age of 135 and 161 days for these two species, respectively, with more rapid growth following recruitment to freshwater. Chemical analyses of otolith carbonate of the Hawaiian gobies by electron microprobe for strontium and calcium concentrations provided valuable insights into a fish's past history. A combination of structural and chemical analyses makes it possible to link growth and recruitment to nutritional and environmental factors. Such information developed as a broad model would be applicable to the management of Hawaiian gobies and would greatly improve the quality of information available for these unique fish populations and other fish populations     

Validation of first annulus formation in red snapper otoliths with the use of an alizarin complexone fluorescent marker

The red snapper (Lutjanus campechanus) is among the most studied reef fish species in the Gulf of Mexico. Several studies have used counts of annuli in sectioned sagittal otoliths to age red snapper. However, interpretation of the putative first annulus has been a major source of debate among otolith readers throughout the Gulf of Mexico. Our objective was to use the chemical marker alizarin complexone to validate the periodicity of first opaque annulus formation in red snapper otolith sections. Juvenile red snapper were immersed in 100 mg alizarin complexone per L seawater solution in November 2005 and then reared in 6000 l circular tanks until July 2006. Otoliths were then removed from the fish and thin sectioned. All experimental otolith sections displayed a distinct fluorescent mark ranging from 0.62 to 0.96 mm from the core when viewed under the microscope with a rhodamine filter. The diffuse opaque annulus was located distally to the alizarin mark in all specimens (ranging from 0.88 to 1.51 mm). The distal position of the presumptive first annulus relative to the alizarin mark in all specimens indicates that this diffuse opaque annulus in red snapper sectioned otoliths forms during the first winter after hatching. Translucent marginal edges of all otolith sections indicate that first opaque annulus formation is completed by mid-July.     

The record of daily growth in otoliths of Atlantic silversides, Menidia menidia, from field and laboratory

Otoliths were removed from field-collected silversides of age less than 3 months. Otolith diameter was highly correlated with total length of the fish. Daily growth ring counts for this species are known to be a function of age rather than size, so widths for the daily growth rings provide a record of daily increases in length of the fish. Measurement of ring widths showed that weekly specific growth rate was greater than 70% at age 1 week, but declined to about 30% at age 1 month and about 15% at age 2 months. A laboratory experiment in which temperature was changed on a weekly basis demonstrated that environmental variables can affect the width of rings. Nevertheless, the growth rate of field-collected fish, as calculated from otolith ring widths, was more highly correlated with size of fish, as measured by otolith radius, than with the environmental variables of temperature, salinity and plankton abundance. Back-calculation of growth rates from otolith ring widths of five fish collected at the end of the growing season yielded the same age-growth curves as were obtained from 203 fish collected biweekly during the season.     

Age and growth of the Black Sea turbot, Psetta maxima (Linneaus, 1758) (Pisces: Scophthalmidae), estimated by reading otoliths and by back-calculation

Age and growth of the Black Sea turbot, Psetta maxima, were determined from a total of 1445 individuals collected along the eastern Black Sea coast between 1990 and 1996. Age was estimated by interpreting growth rings in whole and broken sagittal otoliths. The former method underestimated the age over 5 years, and a maximum age of 11 years was observed by the latter. Marginal increment analysis clearly showed that a single annulus is formed in early summer each year. Growth in length differed between sexes, and females attained a larger size than males at the same age. No significant difference was found between the mean observed total length (TL), the back‐calculated TL derived from radius measurements and the TL estimated from otolith size–fish size relationship. The von Bertalanffy growth parameters estimated by the length‐at‐age data were: L_∞ = 96.24 cm; K = 0.119 year^?1; t₀ = ?0.01 year for the entire population.     

Microstructural growth in otoliths of black rockfish,sebastes schlegeli, from prenatal larval to early juvenile stages

Microstructural growth in the sagittae ofSeastes schlegeli, a viviparous scorpaenid, is described from prenatal larval to early juvenile stages, and related to morphological changes. Embryos and prenatal larvae were extruded from a gravid female from 21 d prior to birth onwards, and released larvae reared and sampled up to 58 d after birth. Eggs hatched in the ovary 14 d prior to birth. At this time, otoliths consisted of a core surrounded by a prominent check, similar to the otolith structure seen in oviparous fishes. Fourteen growth increments had been deposited by birth. The parturition mark it-self comprised a prominent check and narrow growth increment Growth increments were deposited daily from hatching up to 58 d after birth, whereas accessory primordia first appeared in otoliths by ca. 32 d after birth, at a specimen total length of ca. 13 mm. This corresponded to the period during which the larvae metamorphosed into juveniles. Otoliths grew exponentially during the larval stage and linearly during the juvenile stage. when plotted against total length. Growth in total length from hatching to 58 d after birth could be represented by the Gompertz curve.     

Multiple sources of character information and the phylogeny of Hawaiian drosophilids

Relationships among representatives of the five major Hawaiian Drosophila species groups were examined using data from eight different gene regions. A simultaneous analysis of these data resulted in a single most-parsimonious tree that (1) places the adiastola picture-winged subgroup as sister taxon to the other picture-winged subgroups, (2) unites the modified-tarsus species group with flies from the Antopocerus species group, and (3) places the white-tip scutellum species group as the most basal taxon. Because of the different gene sources used in this study, numerous process partitions can be erected within this data set. We examined the incongruence among these various partitions and the ramifications of these data for the taxonomic consensus, prior agreement, and simultaneous analysis approaches to phylogenetic reconstruction. Separate analyses and taxonomic consensus appear to be inadequate methods for dealing with the partitions in this study. Although detection of incongruence is possible and helps elucidate particular areas of disagreement among data sets, separation of partitions on the basis of incongruence is problematic for many reasons. First, analyzing all genes separately and then either presenting them all as possible hypotheses or taking their consensus provides virtually no information concerning the relationships among these flies. Second, despite some evidence of incongruence, there are no clear delineations among the various gene partitions that separate only heterogeneous data. Third, to the extent that problematic genes can be identified, these genes have nearly the same information content, within a combined analysis framework, as the remaining nonproblematic genes. Our data suggest that significant incongruence among data partitions may be isolated to specific relationships and the "false" signal creating this incongruence is most likely to be overcome by a simultaneous analysis. We present a new method, partitioned Bremer support, for examining the contribution of a particular data partition to the topological support of the simultaneous analysis tree.     

Daily growth increments in the otoliths of the three-spined stickleback, Gasterosteus aculeatus L.

Daily increment formation was demonstrated in the sagittae of the three-spined stickleback, Gasterosieus aculeatus L., under both laboratory and field conditions. The onset of daily increment formation coincided with the day of hatching. The main sources of inaccuracy in age determination resulted from difficulties in resolving narrow increments in the sagittae of fish held at low temperatures and the increasing incidence of checks with age. The advantage of daily increments for investigating growth in this species was demonstrated from a comparison between increment-derived age-at-length data and length-at-capture data, since the latter significantly under-estimated early growth rate within a population.     

Age and growth of Lessepsian rabbitfish from the eastern Mediterranean

Rabbitfish are currently an important component of the eastern Mediterranean inshore fishery. This study estimates age and calculates growth of Siganus rivulatus and S. luridus from the Lebanese coastal waters based on otolith analysis and compares results with available data from different geographical locations. Annual periodicity of alternating zones was confirmed for S. rivulatus, in which one opaque and one translucent zone were observed to deposit each year, but not for S. luridus. Both species appear to have a maximum lifespan of 6 years. The von Bertalanffy growth functions were L_t = 318.9(1 ? e^{?0.225(t+1.307)}) for S. rivulatus and L_t = 274.9(1 ? e^{?0.330(t+1.039)}) for S. luridus and length–weight relationships were estimated as for S. rivulatus and for S. luridus. The rabbitfish catches of the Lebanese fishery consist mainly of individuals which have not reached their first maturity. Rabbitfish from the eastern Mediterranean coastal waters appear to grow rapidly most of the year and are thus able to maintain relatively important population size despite intensive fishing pressure.     

Age and growth of the Australian sharpnose shark,Rhizoprionodon taylori,from north Queensland,Australia

Synopsis Age and growth were studied inRhizoprionodon taylori using specimens caught in Cleveland Bay, North Queensland, Australia. Von Bertalanffy growth parameters were estimated using three different techniques: vertebral ageing, back calculation and length frequency. Vertebrae from 138 specimens were sectioned and narrow circuli counted to estimate age. Marginal increment analysis verified that circuli were produced annually in late summer, probably as a result of stress during the mating season. The oldest female was 7 and male 6 years old. Von Bertalanffy growth parameters estimated from vertebral ageing data for males were t_O = 0.410 yr, K = 1.337, L = 652.2 mm, and for females t_O = 0.455 yr, K = 1.013 and L = 732.5 mm. Growth parameters determined by length frequency and back calculation techniques concurred with those from vertebral ageing. Growth of the 0+ age class was very rapid, averaging 140% of the size at birth in the first year. Males and females matured after only one year, the lowest age at maturity reported in the family Carcharhinidae. Annual growth increments decreased rapidly after maturity, and little growth occurred after three years.     

Age, growth and reproductive strategy of the snakehead, Ophicephalus striatus Bloch, from Sri Lanka

A total of 281 snakehead-lula, Ophicephalus striatus , collected between November 1982 and June 1983 from inundated rice fields and swamps in south-western Sri Lanka were analysed. Age determination by length frequencies and scale annuli revealed six age groups. An asymptotic length of 520 mm was estimated by the von Bertalanffy growth model.
The ova were assigned to four developmental stages and a maturity scale was developed for the females. Fast growing 2-year-old fish attain sexual maturity. The ovum size frequencies and occurrence of mature and spent fish indicate that this fish spawns during the south-west monsoon season. Fecundity estimates ranged from 1688 to 7146 ova. Total length and weight are equally useful for predicting fecundity.     

Daily growth increments in the otoliths of juvenile greenback flounder, Rhombosolea tapirina Gunther, 1862

Otolith check marks of both tetracycline-treated and control juvenile greenback flounders, Rhombosolea tapirina, were attributed to the stress of transfer between aquarium tanks. Subsequent counts showed that otolith increments were deposited daily.