Synthesis and coordination chemistry of tripodal dialkyl[1,2-bis(diethylcarbamoyl)ethyl]phosphonates with lanthanide nitrates

Trifunctional dialkyl [1,2-bis(diethylcarbamoyl)- ethyl] phosphonates, (RO)₂P(O)CH[C(O)N(C₂H₅)₂]- [CH₂C(O)N(C₂H₅)₂] R  CH₃, C₂H₅, i-C₃H₇, n-C₆H₁₃ were prepared from the respective sodium salts, Na[(RO)₂P(O)CHC(O)N(C₂H₅)₂] and N,N- diethylchloroacetamide, and they were characterized by elemental analysis, mass, infrared and NMR spectroscopy. The molecular structure of (i-C₃H₇O)₂- P(O)CH[C(O)N(C₂H₅)₂][CH₂C(O)N(C₂H₅)₂] was determined by single crystal X-ray diffraction analysis and found to crystallize in the monoclinic space group P2₁/c with a=15.589(6), b=9.783(4), c= 16.283(7) Å, β = 110.90(3)°, Z = 4 and V= 2320(2) ų. The structure was solved by direct methods and blocked least-squares refinement converged with Rf = 5.7% and R_wF= 4.4% on 2266 unique data with F>4σ(F). Important bond distances include PO 1.459(3) Å, CHCO 1.228(3) Å and CHCH₂CO 1.223(3) Å. The coordination chemistry of the ligand with several lanthanides was examined, and the structure of the complex Gd(NO₃)₃{[(i-C₃H₇O)₂P(O)CH[C(O)N(C₂H₅)₂][CH₂C(O)N(C₂H₅)₂]}₂·H₂O was determined. The complex crystallized in the monoclinic space group P2₁/n with a = 13.524(5), b = 22.033(4), c = 19.604(4) Å β = 106.22(2)°, Z = 4 and V= 5609(3) ų. The structure was solved by heavy atom techniques and blocked least-squares refinement converged with R_F = 5.9% and R_wF = 4.1% on 5275 reflections with F > 4σ(F). Both trifunctional ligands were found to bond to Gd(III) through only the phosphoryl oxygen atoms. The remainder of the Gd coordination sphere was composed of three bidentate nitrate oxygen atoms and an oxygen bonded water molecule. Several important bond distances include GdO(phosphoryl)_av = 2.343(5) Å, GdO(nitrate)_av = 2.475(7) Å, GdO(water) = 2.354(5) Å, PO(phosphoryl)_av = 1.467(6) Å, CHCO_av = 1.242(10) Å and CHCH₂CO_av = 1.209(11) Å.     

On the identification of ionic species of neutral halogen dimers, monomers and pincer type palladacycles in solution by electrospray mass and tandem mass spectrometry

Electrospray (ESI) mass spectra analysis of acetonitrile solutions of a series of neutral chloro dimers, pincer type, and monomeric palladacycles has enabled the detection of several of their derived ionic species. The monometallic cationic complexes Pd[κ¹-C,κ¹-N,κ¹-S-C(CH₃S-2-C₆H₄)C(Cl)CH₂N(CH₃)₂]⁺ (1a) and [Pd[κ¹-C,κ¹-N,κ¹-S-C(CH₃S-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](CH₃CN)]⁺ (1b) and the bimetallic cationic complex [κ¹-C,κ¹-N,κ¹-S-C(CH₃S-2-C₆H₄)C(Cl)CH₂N(CH₃)₂]Pd-Cl-Pd[κ¹-C,κ¹-N,κ¹-S-C(CH₃S-2-C₆H₄)C(Cl)CH₂N(CH₃)₂]⁺ (1c) were detected from an acetonitrile solution of the pincer palladacycles Pd[κ¹-C,κ¹-N,κ¹-S-C(CH₃S-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](Cl) 1. For the dimeric compounds {Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](μ-Cl)}₂ (2, Y=H and 3, CF₃), highly electronically unsaturated palladacycles [Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂]⁺ (2d, 3d) and their mono and di-acetonitrile adducts, namely, [Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](CH₃CN)]⁺ (2e, 3e) and [Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](CH₃CN)₂]⁺ (2f and 3f) were detected together with the bimetallic complex [Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂]-Cl-Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N](CH₃)₂]⁺ (2a, 3a) and its acetonitrile adducts [κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](CH₃CN)Pd-Cl-Pd[ κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂]⁺ (2b, 3b) and [κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](CH₃CN)Pd-Cl-Pd[κ¹-C, κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂(CH₃CN)]⁺ (2c, 3c). The dimeric palladacycle {Pd[κ¹-C,κ¹-N-C(CH₃O-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](μ-Cl)}₂ (4) is unique as it behaves as a pincer type compound with the OCH₃ substituent acting as an intramolecular coordinating group which prevents acetonitrile full coordination, thus forming the cationic complexes [(C₆H₄(o-CH₃O)CC(Cl)CH₂N(CH₃)₂-κO,κC,κN)Pd]⁺ (4b), [(C₆H₄(o-CH₃O)CC(Cl)CH₂N(CH₃)₂- κO,κC,κN)Pd(CH₃CN)]⁺ (4c) and [(C₆H₄ (o-MeO)CC(Cl)CH₂N(CH₃)₂-κO, κC,κN)Pd-Cl-Pd(C₆H₄(o-CH₃O)CC(Cl)CH₂N(CH₃)₂-κO,κC,κN)]⁺ (4a). ESI-MS spectra analysis of acetonitrile solutions of the monomeric palladacycles Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](Cl)(Py) (5, Y=H and 6, Y=CF₃) allows the detection of some of the same species observed in the spectra of the dimeric palladacycles, i.e., monometallic cationic 2d-3d, 2e-3e and {Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](Py)}⁺ (5a, 6a) and {Pd[κ¹-C,κ¹-N-C(Y-2-C₆H₄)C(Cl)CH₂N(CH₃)₂](CH₃CN)(Py)}⁺ (5b, 6b) and the bimetallic 2a, 3a, 2b, 3b, 2c and 3c. In all cationic complexes detected by ESI-MS, the cyclometallated moiety was intact indicating the high stability of the four or six electron anionic chelate ligands. The anionic (chloride) or neutral (pyridine) ligands are, however, easily replaced by the acetonitrile solvent.     

Crystal structure of [chloro(diethyldithiocarbamato)butyl phenyl]tin(IV)

The crystal structure of the title compound, SnCl(C₆H₅)(C₄H₉)[S₂CN(C₂H₅)₂], was determined and refined to an R factor of 3.2% for 4876 reflections. The molecule contains five-coordinate tin in a distorted trigonal bipyramidal arrangement with the tin atom lying 0.20 Å below the equatorial plane formed by one of the sulphur atoms, S(1), and the donor carbons of the butyl and phenyl groups. The chlorine and the other sulphur atom, S(2), occupy axial sites, making a S(2)SnCl angle of 156.85(1)°. The SnS(2) bond is markedly elongated (2.764(1) Å) compared to the SnCl bond (2.449(1) Å) and the SnS(1) bond (2.454(1) Å). The structure resembles those of analogues such as (C₆H₅)₂Sn(glygly) in having both hydrocarbon ligands located in the equatorial plane. Crystal data: space group P$\text{1}$: a = 8.291(2) Å, b = 14.726(3) Å, c = 9.509(2) Å, α = 96.24(2)°, β = 107.02(3)°, γ = 116.70(2)°, Z = 2, R = 3.2% for 4876 independent reflections.     

Proton and carbon magnetic resonance studies of the synthetic polypentapeptide of elastin.

Proton and ¹³C magnetic resonance studies are reported on the synthetic polypentapeptide of elastin, HCO-(Val₍₁₎-Pro₍₂₎-Gly₍₃₎-Val₍₄₎-Gly₍₅₎)_n-Val-OMe, where n ∼- 18. Temperature and solvent dependence of peptide N$\text{H}$ chemical shift and solvent dependence of peptide carbonyl chemical shift were used to delineate these moieties preliminary to identification of secondary structure.Based on these studies it is proposed, for the organic solvents of dimethyl sulfoxide, methanol, and low-temperature trifluoroethanol, that dynamic hydrogen bonds form in order of decreasing frequency of occurrence between the Val₍₁₎$\text{C}$O and the Val₍₄₎ N$\text{H}$ (a β-turn), between the Gly₍₃₎ N$\text{H}$ and the Gly₍₅₎$\text{C}$O (an 11-atom, hydrogen-bonded ring), and a more limited interaction between the Gly₍₃₎$\text{C}$O and the Gly₍₅₎ N$\text{H}$ (a γ-turn).Arguments are presented that relate the conformational features proposed above to the coacervate, which is a filamentous state.     

The dehalogenation of iodouracil by cysteine. Intramolecular general-acid catalysis of cysteine addition to 5-iodouracil

The rate-determining step of the cysteine-catalyzed deiodination of 5-iodouracil is the formation of 5-iodo-6-cysteinyl-5,6-dihydrouracil. The rate of the reaction depends upon the concentration of un-ionized 5-iodouracil and the following ionic species of cysteine; ^?OOC(NH₃⁺)CHCH₂S^?. Unlike the reaction of 2-mercapto-ethanol with 5-iodouracil, the cysteine reaction is not subject to catalysis by imidazolium ion and tris(hydroxymethyl)aminomethane hydrochloride. When the rates of cysteine reacting with 5-iodouracil are measured in both H₂O and D₂O, a large kinetic isotope effect is observed ($\text{k}{}_2{}^{\mathrm{<mtext>H</mtext><mtext>20</mtext>}}\text{k}{}_2{}^{\mathrm{<mtext>D</mtext><mtext>20</mtext>}}\text{= 4.10}$), thus implicating the protonated α amino group of cysteine as an intramolecular general acid catalyst for the reaction. These results and possible mechanisms for the actual dehalogenation of the intermediate 5-iodo-6-cysteinyl-5,6-dihydrouracil are discussed in terms of a possible mechanism for enzymatic halopyrimidine dehalogenation.     

Synthesis and crystal and molecular structure of a methyl N,N-diethylcarbamylmethylenephosphonato dysprosium thiocyanate complex

Bis-Methyl N,N-diethylcarbamylmethylenephosphonato dysprosium thiocyanate, Dy[O₂P(OCH₃)CH₂C(O)N(C₂H₅)₂]₂(NCS) was prepared from the combination of ethanolic solutions of Dy(NCS)₃·xH₂O and (CH₃O)₂P(O)CH₂C(O)N(C₂H₅)₂. The complex was characterized by infrared and NMR spectroscopy, and single crystal X-ray diffraction methods. The crystal structure was determined at 25 °C from 3727 independent reflections by using a standard automated diffractometer. The complex was found to crystallize in the monoclinic space group P2₁/c with a = 13.282(4) Å, b = 19.168(5) Å, c = 9.648(2) Å, β = 90.09(2)°, Z = 4, V = 2456.4 ų and ?_cald = 1.72 g cm^?3. The structure was solved by standard heavy atom techniques, and blocked least-squares refinement converged with R_f = 4.7% and R_wF = 4.9%. The Dy atom is seven coordinate and bonded in a bidentate fashion to two anionic phosphonate ligands [O₂P(OCH₃)CH₂C(O)N(C₂H₅)₂^?] through the carbonyl oxygen atoms and one of two phosphonate oxygen atoms. In addition, each Dy atom is coordinated to two phosphonate oxygen atoms from two neighboring complexes and to the nitrogen atom of a thiocyanate ion. This coordination scheme gives rise to a two-dimensional polymeric structure. Some important bond distances include DyNCS 2.433(8) Å, DyO(carbonyl)_avg 2.39(2) Å, DyO(equat. phosphoryl)_avg 2.303(8) Å, DyO(axial phosphoryl)_avg 2.25(2), PO(phosphoryl)_avg 1.493(3) Å and CO(carbonyl)_avg 1.25(1) Å.     

Redox reactions of the hydrogenase-cytochrome C3 system from Desulfovibrio gigas with the synthetic analogue of ferredoxin active sites [Fe4S4 (SCH2CH2OH)4]2−

The synthetic cluster [Fe₄S₄ (SCH₂CH₂OH)₄]^2? and ferredoxin I from $\text{Desulfovibrio}\text{gigas}$ have been comparatively reacted in the presence of hydrogen with two enzyme components isolated from the $\text{D.}\text{gigas}$ electron carrier system: hydrogenase and cytochrome c₃. The reactions have been followed by spectrophotometric and manometric methods. No reduction is detected unless both enzymes are simultaneously present. The easy reduction in the presence of hydrogenase-cytochrome c₃ combination takes place in two stages corresponding each to one equivalent of reduction. The first stage is reversible while the second is not and yields a super reduced species deriving from the cluster complex.     

Kinetics of the reduction of C-9 substituted acridinium cations by 1,4-dihydronicotinamides

Second-order rate constants (k₂) are reported for the reduction of 9-R-10-methylacridinium cations (5:R = H, CH₃, CH₃CH₂, C₆H₅CH₂, (CH₃)₂CH, C₆H₅, 4-(CH₃)₂NC₆H₄) by 1-benzyl-1,4-dihydronicotinamide (2:R = C₆H₅CH₂) in 20% CH₃CN-80% H₂O at 25°C. All 5:R ≠ H are reduced in the range 20- to 140-fold more slowly than 5:R = H. However, there is no simple relationship between k₂ and the nature of R, nor between k₂ and the second-order rate constant for hydroxide ion attack at C-9 of these cations in pseudobase formation. Rates of reduction of 5 by 1-benzyl-4,4-dideuterio-1,4-dihydronicotinamide allow the calculation of the following kinetic isotope effects in this solvent medium: 5:R, $\text{k}{}^{\mathrm{<mtext>H</mtext>}}\text{k}{}^{\mathrm{<mtext>D</mtext>}}\text{:}\text{H}$, 1.56; C₆H₅CH₂, 2.7; C₆H₅, 5.4. Substituent effects upon k₂ were evaluated for the reduction of 5 by 1-(X-benzyl)-1,4-dihydronicotinamides, and lead to the following Hammett ? parameters: 5:R, ?: H, ?0.68; C₆H₅CH₂, ?0.92; C₆H₅, ?0.96. The latter two values require essentially complete unit positive charge generation on the nicotinamide moiety in the rate-determining transition state. It is shown that these Hammett ? values and the above isotope effects can only be rationalized by a two-step e^? + H^? mechanism for hydride transfer from 2 to 5 in this solvent system. This result contrasts with our earlier conclusion of direct, one-step hydride transfer in the reduction of isoquinolinium cations by 2, but is consistent with our observation that acridinium cations are reduced 37500-fold faster by 2 than predicted on the basis of the relative rates of nucleophilic attack (hydroxide ion) on acridinium and isoquinolinium cations. It is suggested that the availability of both Hammett ? values and primary kinetic isotope effects will generally allow the establishment of the mechanism of hydride transfer in these systems. Application of these ideas to literature data suggests that 5:R = H is reduced by direct hydride transfer in acetonitrile solution, in contrast to the above result in predominantly aqueous solution. The ready formation of acridanyl radicals by electron transfer to acridinium cations is demonstrated by the formation of Wurster's Blue radical cation upon mixing solutions of acridinium cations with N,N,N′,N′-tetramethyl-p-phenylenediamine.     

Synthesis and spectroscopic properties of Co(salen) derivatives containing pendant thioether groups and their dioxygen adducts

Two Co(salen) derivatives, Co(sal-ipsen) and Co(sal-bsen), containing pendant (CH₂)₂S(i-C₃H₇) and (CH₂)₂SC₆H₅ groups were synthesized. Electronic and ESR spectra in methylene chloride show that the former is five-coordinate with pendant thioether coordination at 198 K or below whereas the latter is four-coordinate at 198 K and becomes a mixture of the four- and five-coordinate species at liquid nitrogen temperature. Upon oxygenation at low temperatures, both complexes form dioxygen adducts in which the pendant thioether groups are coordinated to the trans position to dioxygen. Resonance Raman spectra show that Co(sal-ipsen) yields an equilibrium mixture of the 1:1 and 1:2(O₂/ Co) adducts at 190 K while Co(sal-bsen) forms only the 1:1 adduct under similar conditions. These differences between Co(sal-ipsen) and Co(sal-bsen) can be attributed to the variance in basicity of their pendant sulfur atoms.     

Solution-phase disproportionation equilibria for monosubstituted Pentakis- (arylisocyanide)cobalt(I) complexes by proton-NMR studies

Equilibrium constants, K_dis, for the solvent- dependent, solution-phase disproportionation equilibria of monosubstituted pentakis(arlisocyanide)cobalt(I) complexes: 2[Co(CNR)₄L]⁺?[Co(CNR)₃L₂]⁺ + [Co(CNR)₅]⁺, K_dis = $\text{[Co(CNR)}{}_3\text{L}{}_2\text{][Co(CNR)}{}_5\text{]}\text{[Co(CNR)}{}_4\text{L]}{}^2$ are measured by planimeter-integration of proton- NMR spectra at ambient temperature. The complexes, [Co(CNR)₄L]ClO₄, R = 2,6-Me₂C₆H₃, L = P(C₆H₅)₃, P(C₆H₄Cl-p)₃, P(OC₆H₅)₃, P(OC₆H₄Cl-p)₃; R = o-MeC₆H₄, L = P(C₆H₄Cl-p)₃, P(OC₆H₅)₃, P(OC₆H₄Cl-p)₃; R = 2,4,6-Me₃C₆H₂, L = P(C₆H₅)₃; R = 2,6-Et₂C₆H₃, L = P(C₆H₅)₃; are investigated in the deuterated solvents, CDCl₃, CD₃CN, (CD₃)₂CO, C₅D₅N, CD₃NO₂, and (CD₃)₂SO. Disproportionation seems to occur in all [Co(CNR)₄L]⁺, but NMR study is facilitated by utilizing equivalent alkyl protons (i.e., Me-groups) on the RNC ligands.Correlation of K_dis values with steric-hindrance of the RNC in sets of complexes with the same P-ligand is evident in all solvents: K_dis decreases with increased steric-hindrance in RNC. The K_dis values for complexes with the same RNC and analogous triarylphosphine, triarylphosphite ligands (i.e., PR₃, P(OR)₃, same R) are approximately equal. The K_dis values for complexes of P-ligands with Cl-substituent are significantly larger than K_dis values for complexes with the corresponding unsubstituted P-ligands (e.g., [Co(CNR)₄P(C₆H₄Clp)₃]ClO₄vs. [Co(CNR)₄P(C₆H₅)₃]ClO₄) in (CD₃)₂CO and C₅D₅N solution, but are smaller in CDCl₃ and CD₃CN, and approximately equal in CD₃NO₂ and (CD₃)₂SO. Properties of the solvents are also considered.     

Enkephalinase: Selective peptide inhibitors

A unique, CNS membrane bound enkephalinase is described with greatest activities being measured in the striatum of the mouse. This enzyme was resistant to inhibition by puromycin and bestatin which are potent aminopeptidase inhibitors and to the angiotensin converting enzyme inhibitors, captopril and the free acid of MK-421, which were also very weak inhibitors of aminopeptidase. However, the glycopeptide, phosphoramidon, and the hydroxamic acids, HO-NHCOCH(CH₂CH(CH₃)₂)-CO-Ala-Gly-NH₂ and HO-NHCOCH(CH₂C₆H₅)-CO-Ala-Gly-NH₂, were potent enkephalinase inhibitors with IC₅₀'s (nM) of 39, 3.1 and 8.4, respectively. These peptides remain to be tested $\text{in}$$\text{vivo}$.     

Copper(I)-organophosphine complexes of bis(3,5-dimethylpyrazol-1-yl)dithioacetate ligand

Copper(I) complexes have been synthesized from the reaction of CuCl, monodentate tertiary phosphines PR₃ (PR₃ = P(C₆H₅)₃; P(C₆H₅)₂(4-C₆H₄COOH); P(C₆H₅)₂(2-C₆H₄COOH); PTA, 1,3,5-triaza-7-phosphaadamantane; P(CH₂OH)₃, tris(hydroxymethyl)phosphine) and lithium bis(3,5-dimethylpyrazolyl)dithioacetate, Li[LCS₂]. Mono-nuclear complexes of the type [LCS₂]Cu[PR₃] have been obtained and characterized by elemental analyses, FT-IR, ESI-MS and multinuclear (¹H, ¹³C and ³¹P) NMR spectral data; in these complexes the ligand behaves as a κ³-N,N,S scorpionate system. One exception to this stoichiometry was observed in the complex [LCS₂]Cu[P(CH₂OH)₃]₂, where two phosphine co-ligands are coordinated to the copper(I) centre. The solid-state X-ray crystal structure of [LCS₂]Cu[P(C₆H₅)₃] has been determined. The [LCS₂]Cu[P(C₆H₅)₃] complex has a pseudo tetrahedral copper site where the bis(3,5-dimethylpyrazolyl)dithioacetate ligand acts as a κ³-N,N,S donor.