Modeling of Coulomb collisions in a kinetic description of the electron cyclotron resonance plasma heating

The electron distribution function is modeled numerically with allowance for Coulomb collisions and quasilinear effects under cyclotron resonance conditions by solving a two-dimensional kinetic equation containing the quasilinear diffusion operator and the Coulomb collision operator in the Landau form. Two simplified model collision integrals that make it possible to describe electron heating by microwave radiation are considered. The first model collision operator is obtained by introducing the parametric time dependence of the temperature of the background Maxwellian electrons into the linear collision integral. It is shown that the heating of the bulk electrons can be described in a noncontradictory way if the temperature dynamics of the background electrons is calculated from the equation of energy balance, which is governed by the amount of the microwave power absorbed by the resonant electrons with the distribution function modified due to quasilinear effects. This conclusion is confirmed in a more rigorous fashion by comparing the solutions obtained using the first model Coulomb collision integral with those obtained using the second model integral, namely, the nonlinear operator derived by averaging the distribution function of the scattering electrons over pitch angles. The time-dependent linear collision integral is used to obtain analytic solutions describing quasi-steady electron heating with allowance for the quasilinear degradation of microwave power absorption.     

Coulomb explosion in a cluster plasma

The energy spectra of particles in a cluster plasma produced during the Coulomb explosion of spherically symmetric clusters with an arbitrary initial density distribution are investigated. A relationship is found between the energy spectrum of the ions and the density profile of the atoms in the cluster.     

Effect of microfield fluctuations on Coulomb collisions

The effect of plasma microfields on Coulomb collisions between the particles is considered. It is shown that perturbations from other particles insignificantly affect the frequency of short-range collisions. The results of calculating the pair correlation function of the particles in a plasma for distances much shorter than the interparticle distance agree well with predictions of the binary theory.     

Three-body collisions in a plasma in a strong laser field

Electron-ion collisions in a high-density plasma in strong electromagnetic fields are considered. The applicability condition for the approximate model of pair collisions in strong fields are determined. It is shown that this condition is identical to the condition for the plasma to be transparent. Investigations were carried out by the test particle method generalized to the case of several scattering centers. An accurate calculation of short-range collisions is provided by a “jump” method that is based on the exact solution to the problem of the motion of a particle in a Coulomb potential. This method can also be applied in other approaches to simulating a collisional plasma (such as particle-in-cell and molecular dynamics methods).     

Angiogenesis and the unique nature of tumor matrix

In this article we consider the factors responsible for the unique nature of the pericellular matrix of solid tumors and we discuss the role of alterations of tumor blood vessel structure. We examine the role of VEGF (vascular endothelial growth factor), a factor controlling permeability of capillaries, plasma protein extravasation, and the formation of a fibrin barrier. We discuss how this barrier could be destroyed by metalloproteinases bound on the surface of endothelial cells migrating through the matrix and how these enzymes are responsible for the activation of gelatinases that destroy basement membranes. The process called tubulogenesis, which gives rise to hyperpermeable tumor capillaries, will also be described. Alterations of the blood vessel structure leading to hypoxia of the matrix, and accumulation of plasma proteins and of blood cells will be treated. Finally, we review some of the strategies that might exploit this knowledge about the nature of the tumoral matrix for designing novel anticancer treatments.     

Multiple origins of a unique pollen feature: stellate pore ornamentation in Amaranthaceae

Stellate pore ornamentation is an unusual feature of angiosperm pollen, so far it is known in only ten genera of Amaranthaceae. The pollen grains of these plants have apertures with large hook‐shaped ektexinous bodies that are stellately arranged. Previous studies interpreted this character complex as a synapomorphy in consideration of its strong specialization. By reconstructing the evolution of stellate pore ornamentation based on phylogenetic trees of Amaranthaceae obtained by parsimony, likelihood, and Bayesian analysis of chloroplast trnK/matK DNA sequences, clear evidence is provided for several independent origins and reversals to less specialized aperture types. In addition to the gomphrenoid genus Pseudoplantago, stellate pore ornamentation evolved several times among achyranthoid genera, which have an African distribution. The most derived apertures, with 5 – 6 large protruding hooks, appear independently in Centemopsis on the one hand, and in Psilotrichum sericeum on the other. In an effort to break down the complex character syndrome of stellate pore ornamentation, we delimited a set of six pollen morphological characters that could be independently traced on the phylogeny. It appears that stellate pore ornamentation was independently derived from apertures with equally spread ektexinous bodies that became hook‐shaped, reduced in number, and symmetrically arranged. Likewise the symmetrically arranged, rectangular ektexinous bodies in Marcelliopsis represent an independent specialization. In view of this pattern of morphological changes, functional significance in the context of specialized insect pollination syndromes and positive selection for stellate pore ornamentation is hypothesized. Stellate pore ornamentation provides an example of a specialized pollen character complex with adaptive significance, and underlines the need for a dense taxon sampling for analyses of character evolution.     

Strength of feature contrast mediates interaction among feature domains

Traditional theories of texture segregation suggest that elementary visual features are processed in parallel by independent modules at early visual stages. Here we show that, for small feature contrasts and large values evoking perceptual popout, different forms of module interaction exist. While discrimination of highly salient features rests on independent feature specific pathways, information is summed across domains when barely noticeable ones are to be detected in homogeneous textures.     

Bacterial mycophagy: definition and diagnosis of a unique bacterial-fungal interaction.

This review analyses the phenomenon of bacterial mycophagy, which we define as a set of phenotypic behaviours that enable bacteria to obtain nutrients from living fungi and thus allow the conversion of fungal into bacterial biomass. We recognize three types of bacterial strategies to derive nutrition from fungi: necrotrophy, extracellular biotrophy and endocellular biotrophy. Each is characterized by a set of uniquely sequential and differently overlapping interactions with the fungal target. We offer a detailed analysis of the nature of these interactions, as well as a comprehensive overview of methodologies for assessing and quantifying their individual contributions to the mycophagy phenotype. Furthermore, we discuss future prospects for the study and exploitation of bacterial mycophagy, including the need for appropriate tools to detect bacterial mycophagy in situ in order to be able to understand, predict and possibly manipulate the way in which mycophagous bacteria affect fungal activity, turnover, and community structure in soils and other ecosystems.     

Analysis of conserved domains identifies a unique structural feature of a chloroplast heat shock protein

Summary A low molecular weight heat shock protein which localizes to chloroplasts has been identified in several plant species. This protein belongs to a eukaryotic superfamily of small HSPs, all of which contain a conserved carboxyl-terminal domain. To investigate further the structure of this HSP, we isolated and sequenced cDNA clones for the chloroplast LMW HSPs from Petunia hybrida and Arabidopsis thaliana. The cloning of chloroplast HSPs from these two species enabled us to compare the amino acid sequences of this protein from plant species (petunia, Arabidopsis, pea, soybean and maize) that represent evolutionarily divergent taxonomic subclasses. Three conserved regions were identified, which are designated as regions I, II and III. Regions I and II are also shared by cytoplasmic LMW HSPs and therefore are likely to have functional roles common to all eukaryotic LMW HSPs. In contrast, consensus region III is not found in other LMW HSPs. Secondary structure analysis predicts that this region forms an amphipathic -helix with high conservation of methionine residues on the hydrophobic face and 100% conservation of residues on the hydrophilic face. This structure is similar to three helices, termed methionine bristles, which are found in a methionine-rich domain of a 54 kDa protein component of signal recognition particle (SRP54). The conservation of regions I and II among LMW cytoplasmic and chloroplast HSPs suggests that these HSPs perform related functions in different cellular compartments. However, identification of the methionine bristle domain suggests that chloroplast HSPs also have unique functions or substrates within the special environment of the chloroplast or other plastids.Abbreviations HS heat shock - HSP heat shock protein - LMW low molecular weight     

Adhesion of human erythrocytes to glass: The nature of the interaction and the effect of serum and plasma

Studies of normal human erythrocyte adhesiveness to glass have demonstrated quantitative and qualitative differences between cell-glass and cell-cell contact interaction. Identifiable charged groups on the red cell surface were of minor importance in the adhesive process and it is postulated that direct cell-glass contact attraction involves nonpolar regions of the red cell surface. However, erythrocyte adhesion to glass in the presence of serum and plasma is affected by electrostatic forces. At least two critical factors are present in serum and plasma: a heat-stable factor(s) diminishing adhesion and a heat-labile factor(s) promoting cell-glass interaction. A postulate is presented concerning the role of soluble fibrin monomer complexes in promoting cell adhesion to glass.     

Effect of plasma nonlinearity on the beam-plasma interaction in a hybrid plasma waveguide

A study is made of the characteristic features of the effect of plasma nonlinearity in a slow-wave structure on microwave generation by an electron beam and on electron beam energy losses. Theoretical results on the plasma density variation, the amplitude of the excited microwaves, and the velocity distribution function of the beam electrons are compared with the experimental data. It is shown that the self-consistency between the decreasing plasma density gradient and the spatial variation of the amplitude of an amplified wave in a slowwave structure leads to a significant (severalfold) increase in the efficiency with which the electron beam energy is converted into microwave energy in short pulses. The predictions of the theoretical model developed to describe the non-steady-state beam-plasma interaction agree well with the experimental data.     

Hamster placental lactogen-II contains a structural feature unique among the growth hormone-prolactin-placental lactogen family

Sequence analysis of cDNA for hamster placental lactogen-II (PL-II) revealed that while this protein has a high degree of sequence homology to mouse and rat PL-II it contains a pair of cysteine residues not present in the mouse and rat proteins or in any other known member of the GH-PRL-PL protein family. This unique pair of cysteine residues may be responsible for the extreme tendency of hamster PL-II, compared to other members of the GH-PRL-PL family, to form disulfide-bonded hormone-serum protein complexes.     

Molecular and structural characterization of a surfactant-stable high-alkaline protease AprB with a novel structural feature unique to subtilisin family

High-alkaline proteases are of great importance because of their proteolytic activity and stability under high-alkaline condition. We have previously isolated a new protease (AprB) which has potential industrial applications based on its high-alkaline adaptation. However, the molecular and structural basis for alkaline adaptation of this enzyme has not been fully elucidated. In the present study, AprB gene was cloned and expressed in the Bacillus subtilis WB600. This gene codes for a protein of 375 amino acids comprised with a 28-residual signal peptide, a 78-residual pro-peptide, and a 269-residual mature protein. The deduced amino acid sequence has the highest homology of 63.2% with that of the high-alkaline proteases. Recombinant AprB was purified and determined to be monomeric with molecular mass of 26.755 kDa. The NH₂-terminal sequence of the purified AprB was A-Q-S-I-P-W-G-I-E-R. This enzyme exhibited high catalytic efficiencies (K_cat/K_m) towards natural, modified, and synthesis substrates with optimal activity at 60 °C and pH 10. AprB was stable over a wide range of pH 5 to 11 and various surfactants, and could be activated by Mg²⁺, Ca²⁺ and Ba²⁺. The structural properties of AprB, like a higher ratio of R/(R + K), a larger area of hydrophobic surface, increased number of ion pairs formed by Arg residue, and the exposure of Asp active residue on the surface, might be responsible for its alkaline adaptation. In contrast with members of subtilisin family, such as M-protease and subtilisin BPN′, AprB harbored a high content of Glu and Asp residues, and a low content of Arg and Lys residues on the surface. Interestingly, these structural characters were similar with that of psychrophilic proteases, which suggested that these molecular factors were not restricted in the psychrophilic proteases, and therefore were not solely responsible for their cold-adaptation. Our results reveal a novel structural feature of AprB unique to subtilisin family and provide clues for its alkaline adaptation.     

On the nature of dark spots arising in a tokamak plasma during a disruption

The sudden appearance of bright and dark spots against the background lithium emission from the central regions of the plasma column was observed during major plasma disruptions in the T-11M tokamak with a lithium limiter. The measurements were performed with the help of an AXUV photodiode array operating in the energy range 1–5000 eV. Such spots in the plasma core arise in the fast transient stage of a major disruption (during the onset of the positive pulse of the plasma current) and are rather narrowly localized over r (in particular, over the vertical axis). It is supposed that the observed dark spots are related to the development of magnetic islands induced in the plasma core by an outer MHD perturbation. This effect can be used as a tool for studying specific forms of MHD resonance.     

Coherent interaction of a relativistic electron beam with a plasma

Results are presented from experimental studies of the interaction of a modulated relativistic electron beam with a plasma. The electron energy spectra at the exit from the interaction chamber are measured for electron beams with energies of about 50 and 20 MeV. The coherent interaction of an electron beam with a microwave-driven plasma is studied. It is shown that, in strong electric fields that can be generated in the coherent interaction, the beam current is very sensitive to the phase of the microwave field.     

Tuberculina-rusts: a unique basidiomycetous interfungal cellular interaction with horizontal nuclear transfer

Cellular interaction of the basidiomycete Tuberculina persicina with the haploid stages of two rusts Puccinia silvatica and Tranzschelia pruni-spinosae was analyzed by serial-section electron microscopy of chemically fixed samples and samples subjected to high-pressure freezing and freeze substitution. Tuberculina persicina is a contact parasite, forming neither haustoria nor other intracellular structures. However, at contact areas between T. persicina and its hosts, distinct interfungal interactions are present. At the beginning, a hyphal cell of T. persicina invades the host cell wall with a protuberance and the cell walls of both protuberance and host cell dissolve at the point of contact. Thus, the plasma membranes of the two organisms contact and fuse to form a pore that enlarges to a final diameter of approximately 1 μm. The membrane of the fusion pore is continuous with the plasma membranes of both cells, and Tuberculina nuclei and other organelles are transferred to the rust cells. Phylogenetic and functional aspects of this curious basidiomycetous interfungal interaction are discussed, and a hypothesis of the evolutionary derivation of the Tuberculina mycoparasitism from a sexual interaction is presented.