Isolation and characterization of a new spore-forming sulfate-reducing bacterium growing by complete oxidation of catechol

A new mesophilic sulfate-reducing bacterium, strain Groll, was isolated from a benzoate enrichment culture inoculated with black mud from a freshwater ditch. The isolate was a spore-forming, rod-shaped, motile, gram-positive bacterium. This isolate was able of complete oxidation of several aromatic compounds including phenol, catechol, benzoate, p-and m-cresol, benzyl alcohol and vanillate. With hydrogen and carbon dioxide, formate or O-methylated aromatic compounds, autotrophic growth during sulfate reduction or homoacetogenesis was demonstrated. Lactate was not used as a substrate. SO _inf4 ^sup2- , SO _inf3 ^sup2- , and S₂O _inf3 ^sup2- were utilized as electron acceptors. Although strain Groll originated from a freshwater habitat, salt concentrations of up to 30 g·l^-1 were tolerated. The optimum temperature for growth was 35–37°C. The G+C content of DNA was 42.1 mol%. This isolate is described as a new species of the genus Desulfotomaculum.     

Desulfomonile tiedjei gen. nov. and sp. nov., a novel anaerobic,dehalogenating, sulfate-reducing bacterium

An anaerobic, dehalogenating, sulfate-reducing bacterium, strain DCB-1, is described and nutritionally characterized. The bacterium is a Gram-negative, nonmotile, non-sporeforming large rod with an unusual morphological feature which resembles a collar. The microorganism reductively dehalogenates meta substituted halobenzoates and also reduces sulfate, sulfite and thiosulfate as electron acceptors. The bacterium requires nicotinamide, 1,4-naphthoquinone and thiamine for optimal growth in a defined medium. The microorganism can grow autotrophically on H₂:CO₂ with sulfate or thiosulfate as terminal electron acceptors. It can also grow heterotrophically with pyruvate, several methoxybenzoates, formate plus sulfate or benzoate plus sulfate. It ferments pyruvate to acetate and lactate in the absence of other electron acceptors. The bacterium is inhibited by MoO _inf4 ^sup2- or SeO _inf4 ^sup2- as well as tetracycline, chloramphenicol, kanamycin or streptomycin. Cytochrome c₃ and desulfoviridin have been purified from cells grown in defined medium. 16S rRNA sequence analysis indicates the organism is a new genus of sulfate-reducing bacteria in the delta subdivision of the class Proteobacteria. We propose that the strain be named Desulfomonile tiedjei.Non-standard abbreviations PIPES piperazine-N,N-bis[2-ethanesulfonic acid] - MES 2-[N-morpholino]ethanesulfonic acid - TES N-tris[hydroxymethyl]methyl-2-aminoethanesulfonic acid - HQNO 2-N-heptyl-4-hydroxy-quinoline-N-oxide - CCCP carbonyl-cyanide-m-chlorophenylhydrazine - CM carboxymethyl     

Phosphate accumulation and the occurrence of polyphosphates and cyclic 2,3-diphosphoglycerate in Methanosarcina frisia

Methanosarcina frisia accumulates phosphate up to 14% of its dry weight. The phosphate is stored as long-chain polyphosphates as shown by ³¹P-NMR investigations. Further results show that the accumulation of phosphates is substrate-dependent. In the presence of H₂ and CO₂ as the only carbon and energy source 180 mg of PO _inf4 ^sup3- /g protein were accumulated, whereas 260 mg PO _inf4 ^sup3- /g protein were accumulated in the presence of methanol. This is far more than necessary for the maintenance of essential metabolic pathways. In addition, the ³¹P-NMR studies show the occurrence of cyclic 2,3-diphosphoglycerate in Methanosarcina frisia. The role of the phosphate metabolites in cell metabolism are discussed.Abbreviations M. Methanosarcina - CCP cyclic 2,3-diphosphoglycerate     

Ammonium and nitrate as nitrogen sources in two Eriophorum species

Summary We compared ammonium and nitrate nutrition in Eriophorum scheuchzeri and E. vaginatum, two Alaskan sedges that are native to high- and low-fertility sites, respectively. When grown in solution culture, the two species were similar in their kinetics of NH _inf4 ^sup+ NO _inf3 ^sup- absorption: at nitrogen concentrations below 50 M, net NH _inf4 ^sup+ and NO _inf3 ^sup- were absorbed at similar rates, but at higher concentrations, net uptake of NO _inf3 ^sup- was significantly faster than that of NH _inf4 ^sup+ . The two species also showed similar abilities to assimilate NO _inf3 ^sup- . Growth of E. vaginatum under NO _inf3 ^sup- nutrition was only slightly less than that under NH _inf4 ^sup+ . The observed similarities between these species from contrasting edaphic habitats indicate that factors other than tissue-specific rates of nitrogen acquisition and assimilation may underlie local adaptation to soil N fertility. Moreover, the capacity of these species to exploit NO _inf3 ^sup- as a N source supports the view that NO _inf3 ^sup- availability may be significant even in wet, acidic, arctic soils.     

Zooplankton induced decrease in inorganic phosphorus uptake by plankton in an oligotrophic lake

Experiments conducted on samples collected from a large oligotrophic lake revealed the following: (1) excretion rates of PO _inf4 ^sup3– by single Daphnia thorata were below detection (5 pmol animal^–1 min^–1) in 20 ml of oligotrophic lake water over a period of 10 min, (2) experimental addition of D. thorata to 20 ml aliquots of lake water decreased community-wide microbial uptake of PO _inf4 ^sup3– on two occasions (as measured by ³²PO _inf4 ^sup3– incorporation), and (3) the presence of D. thorata increased uptake by organisms smaller than 1µm, and decreased uptake by large phytoplankton. The specific mechanism for these responses remains unclear, but the results imply that when phytoplankton larger than 1µm encounter cm scale patches of water recently occupied by Daphnia they may experience decreased PO _inf4 ^sup3– availability rather than elevated concentrations of PO _inf4 ^sup3– caused by excretion. We show that ³²P uptake experiments using natural plankton assemblages can be influenced by the presence or absence of large zooplankton, and that neither grazing, turbulence, nor PO _inf4 ^sup3– excretion can account for this influence.     

Influence of culture density,pH, organic acids and divalent cations on the removal of nutrients and metals by immobilized Anabaena doliolum and Chlorella vulgaris

The potential of alginate-immobilized Anabaena doliolum and Chlorella vulgaris was assessed for removal of nutrients (NO _inf3 ^sup- and NH _inf4 ^sup+ ) and metals (Cr₂O _inf7 ^sup2- and Ni²⁺) at different biomass concentrations (0.05, 0.1, 0.25, 0.49 and 1.22 g dry wt l^-1) and pH values (4 to 10). Though uptake of all these substances was higher in concentrated algal beads (0.25, 0.49 and 1.22 g dry wt l^-1), their rate of uptake was significantly (P<0.001) lower than that of low (0.05 g dry wt l^-1) cell density beads. For A. doliolum, there was no significant difference in uptake rates for beads having densities of 0.05 and 0.1 g dry wt l^-1. Chlorella vulgaris, however, showed maximum efficiency at 0.1 g dry wt l^-1. Uptake of both the nutrients and the metals was maximal at pH 7 followed by pH 8, 6, 9, 10, 5 and 4. Of the different substances (organic acids and divalent cations) used, humic acid was most efficient in decreasing metal uptake. Mg²⁺ was, however, more efficient than Ca²⁺ in decreasing Ni²⁺ uptake. Immobilized algae with a cell density of 0.1 g dry wt l^-1 were the most efficient for nutrient and metal removal at pH 6 to 8.     

Effect of shock-loading of heavy metals on total organic carbon and phosphate removal in an anaerobic-aerobic activated sludge process

The effect of shock-loading of zinc, copper and cadmium ions on the removal of total organic carbon (TOC) and phosphate in an anaerobic-aerobic activated sludge process was investigated. TOC removal was not sensitive to shock-loading of Zn²⁺ and Cd²⁺ ions, and complete removal was achieved even at 20 mg Zn²⁺/l and 20 mg Cd²⁺/l. However, with over 1 mg Cu²⁺/1 TOC removal efficiency decreased. PO _inf4 ^sup3- removal, in contrast, was extremely sensitive to these metal ions, with the threshold being 1 mg Zn²⁺/l and 1 mg Cd²⁺/l. Higher concentrations adversely affected PO _inf4 ^sup3- removal. Copper again proved detrimental; no PO _inf4 ^sup3- removal was achieved even at 1 mg Cu/l. These results highlight the sensitivity of the removal efficiencies of TOC and PO _inf4 ^sup3- to shock loadings of these heavy metals.Y.P. Ting is with the Department of Chemical Engineering, National University of Singapore, Kent Ridge, 0511, Singapore; H. Imai and S. Kinoshita are with the Department of Chemical Process Engineering, Hokkaido University, Sapporo 060, Japan.     

Effect of NH4 +:NO3 - ratios on growth and nitrogen uptake by onions

The modelling of ion uptake by plants requires the measurement of kinetic and growth parameters under specific conditions. The objective of this study was to evaluate the effect of nine NH _inf4 ^sup+ :NO _inf3 ^sup− ratios on onions (Allium cepa L.). Twenty-eight to 84 day-old onion plants were treated with NH _inf4 ^sup+ :NO_f3/sup− ratios ranging from 0 to 100% of each ionic species in one mM solutions in a growth chamber. Maximum N influx (I_max) was assessed using the N depletion method. Except at an early stage, ionic species did not influence significantly I_max, the Michaelis constant (K_m) and the minimum concentration for net uptake (C_min). I_max for ammonium decreased from 101 to 59 pmole cm^-2 s^-1 while I_max for nitrate increased from 26 to 54 pmole cm^-2 s^-1 as the plant matured. On average, K_m and C_min values were 14.29 μM, and 5.06 μM for ammonium, and 11.90 μM and 4.54 μM for nitrate, respectively. In general, the effect of NH₄ ⁺:NO₃ ^- ratios on root weight, shoot weight and total weight depended on plant age. At an early stage, maximum plant growth and N uptake were obtained with ammonium as the sole source of N. At later stages, maximum plant growth and N uptake were obtained as the proportion of nitrate increased in the nutrient solution. The was no apparent nutrient deficiency whatever NH₄ ⁺:NO₃ ^- ratio was applied, although ammonium reduced the uptake of cations and increased the uptake of phosphorus. The research was supported by the Natural Sciences and Engineering Research Council of Canada.     

Limnology of Gallocanta Lake,Aragon, northeastern Spain

A limnological study was sustained from September 1980 to October 1981 to show the evolution of Gallocanta Lake (N.E. Spain) under very dry climatic conditions. It is the physical terminus within an endorheic basin of 500 km² situated 1 000 m over the sea level. In 1977 its maximum depth was 2.5 m but it decreased to 60 cm in 1981 as a consequence of the last very dry years. It is actually 6 km long and 2.5 km wide, and its area is approximately 12 km². Salt concentration was quite constant (32–43 g l^-1) since September 1980 until June 1981. The equivalent ratio Cl^-:SO _inf4 ^sup2- varied between 2.2 and 2.8. From June through October 1981 salinity increased up to 105 g l^-1 and Cl^-:SO _inf4 ^sup2- equivalent ratio varied between 2.5 and 3.4. The relative concentrations of ions were retained all year ordinated as follows: Cl^- > SO _inf4 ^sup2- > HCO _inf3 ^sup- >. CO _inf3 ^sup2- ; Na⁺ > Mg²⁺ ? Ca²⁺ > K⁺. Total reactive phosphorus was less than 1.5 µg-at l^-1 from September 1980 to January 1981. During the rest of the studied period it varied between 2 and 8 µg-at l^-1 (the maximum, in February 1981). Nitrogen oxidized forms were relatively high in winter (4–8 µg-at N-NO _inf3 ^sup- l^-1; 0.5–2.5 µg-at N-NO _inf2 ^sup- l^-1), and early May 1981 (25 µg-at N-NO _inf3 ^sup- l^-1; 1 µg-at N-NO _inf2 ^sup- l^-1). Neither reached 1 µg-at l^-1 from September through December 1980, or from June through October 1981. Planktonic algae increased in density during the period of the study from 10³ to 5 10⁵ cells ml^-1. Chromulina sp. was the main species during autumn and winter (>50% in number of cells ml^-1) while the copepod Arctodiaptomus salinus decreased its population. Lobocystis dichotoma increased its density from December 1980 to May 1981 and was dominant in spring (>90%), when a typical reproductive activity was observed in the Arctodiaptomus population. This species disappeared in late spring. In June 1981 Brachionus plicatilis reached up to near 2 000 individuals ml^-1. This species was not observed after August 1981. Then the ciliate Fabrea salina was the only zooplankter staying in the free waters of the lake and Nannochloris sp. the dominant alga (>90%). Dense macrophytic beds constituted of Lamprothamnium papulosum and Chara galioides covered the bottom of the lake in September 1980 and before that date since the observations began in 1977. They decreased in covered area since October 1980 and disappeared during summer 1981. Gallocanta Lake is in a very stressed situation produced by prolonged drought. The increased salt concentration together with the extremely cold and hot temperatures, and the lack of nitrogen relative to phosphorus are the main environmental factors that controlled the biological populations during the period of the present study.     

Desulfurella acetivorans gen. nov. and sp. nov. —a new thermophilic sulfur-reducing eubacterium

A new type of thermophilic cyanobacterial mat, rich in elemental sulfur and containing large numbers of sulfur-reducing bacteria able to utilize different growth substrates at 55° C, was found in the Uzon caldere (Kamchatka). One of the largest groups among these organisms were acetate-oxidizing sulfur-reducing bacteria, numbering 10⁶ cells · cm^–3 of mat. The pure culture of a sulfur-reducing eubacterium growing on acetate was isolated. Cells of the new isolate are Gram-negative short rods, often in pairs, motile, with a single polar flagellum. The optimal temperature for growth is 52 to 57° C, with no growth observed at 42 or 73° C. The pH optimum is 6.8 to 7.0. The new isolate is demonstrated to be a true dissimilatory sulfur reducer: it is an obligate anaerobe, it is unable to ferment organic substrates and it can use no electron acceptors other than elemental sulfur. Acetate is the only energy and carbon source, and H₂S and CO₂ are growth products. No cytochromes were detected. The G+C content of DNA is rather low, only 31.4 mol%. Thus, morphological and physiological features of the new isolate are quite close to those of Desulfuromonas. But on the grounds of a significant difference in the G+C content of DNA, the absence of cytochromes and because of its thermophilic nature, a new genus Desulfurella is proposed with the type species Desulfurella acetivorans.     

Effect of nutrient deficiency on accumulation and relative molecular weight of poly-β-hydroxybutyric acid by methylotrophic bacterium,Pseudomonas 135

Summary Pseudomonas 135, a facultative methylotroph, was cultivated on methanol as a sole carbon and energy source for the accumulation of poly--hydroxybutyric acid (PHB). The cells grew fairly well on minimal synthetic medium containing 0.5% (v/v) of methanol at pH 7.0 and 30° C. The maximum specific growth rate was determined to be 0.26–0.28 h^–1 with a growth yield of 0.38 in the optimized growth medium. For stimulation of PHB accumulation in the cells, deficiency of nutrients such as NH _inf4 ^sup+ , Mg²⁺ and PO _inf4 ^sup3– was crucial even though cell growth was significantly suppressed. The PHB content of a 40-h culture was determined to be 37% of the total cell mass in NH _inf4 ^sup+ -limited medium, 42.5% on Mg²⁺-deficient medium, and 34.5% on PO _inf4 ^sup3– -deficient medium. The maximum content of PHB in the cells could reach 55% in NH _inf4 ^sup+ -limited fed-batch culture. The average relative molecular eight determined by gel permeation chromatography was 3.7 × 10⁵ in NH _inf4 ^sup+ -limited culture, 2.5 × 10⁵ in Mg²⁺-deficientmedium, and 3.1 × 10⁵ in PO _inf4 ^sup3– -deficient medium. Polydispersity determined in each culture was relatively high (about 10–11). The solid PHB had a melting temperature of 173° C. Correspondence to: J. M. Lebeault     

Effect of dissolved inorganic carbon on the expression of carboxysomes,localization of Rubisco and the mode of inorganic carbon transport in cells of the cyanobacterium Synechococcus UTEX 625

In the cyanobacterium Synechococcus UTEX 625, the extent of expression of carboxysomes appeared dependent on the level of inorganic carbon (CO₂+HCO _inf3 ^sup- ) in the growth medium. In cells grown under 5% CO₂ and in those bubbled with air, carboxysomes were present in low numbers (<2 · longitudinal section^-1) and were distributed in an apparently random manner throughout the centroplasm. In contrast, cells grown in standing culture and those bubbled with 30 l CO₂ · 1^-1 possessed many carboxysomes (>8 · longitudinal section^-1). Moreover, carboxysomes in these cells were usually positioned near the cell periphery, aligned along the interface between the centroplasm and the photosynthetic thylakoids. This arrangement of carboxysomes coincided with the full induction of the HCO _inf3 ^sup- transport system that is involved in concentrating inorganic carbon within the cells for subsequent use in photosynthesis. Immunolocalization studies indicate that the Calvin cycle enzyme ribulose bisphosphate carboxylase was predominantly carboxysome-localized, regardless of the inorganic carbon concentration of the growth medium, while phosphoribulokinase was confined to the thylakoid region. It is postulated that the peripheral arrangement of carboxysomes may provide for more efficient photosynthetic utilization of the internal inorganic carbon pool in cells from cultures where carbon resources are limiting.Abbreviations Chl chlorophyll - DIC dissolved inorganic carbon (CO₂+HCO _inf3 ^sup- +CO _inf3 ^sup2- ) - PRK phosphoribulokinase - RuBP ribulose 1,5-bisphosphate - Rubisco LS large subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase     

Thiosulfate and tetrathionate degradation as well as biofilm generation by Thiobacillus intermedius and Thiobacillus versutus studied by microcalorimetry,HPLC, and ion-pair chromatography

The growth of Thiobacillus (T.) intermedius strain K12 and Thiobacillus versutus strain DSM 582 on thiosulfate and tetrathionate was studied combining on-line measurements of metabolic activity and sulfur compound analysis. Most results indicate that T. intermedius oxidized thiosulfate via tetrathionate to sulfate. Concomittantly, sulfur compound intermediates like triand pentathionate were detectable. The formation is probably the result of highly reactive sulfane monosulfonic acids. The formation of tetrathionate allows the cells to buffer temporarily the proton excretion from sulfuric acid production. With T. versutus intermediate sulfur compounds were not detectable, however, sulfur was detectable. The possibility of a thiosulfate oxidation via dithionate, S₂O _inf6 ^sup2- , is discussed. The on-line measurement of metabolic activity by microcalorimetry enabled us to detect that cells of T. intermedius adhere to surfaces and produce a biofilm by a metabolic process whereas those of T. versutus fail to do so. The importance of the finding is discussed.     

Inhibition of electron transfer through the cytochrome b-c 1 complex by nitric oxide in a photodenitrifier,Rhodopseudomonas sphaeroides forma sp. denitrificans

The effects of nitric oxide (NO) on electron transfer were studied with a photodenitrifier, Rhodopseudomonas sphaeroides forma sp. denitrificans. NO inhibited the oxidation of cytochrome c induced by continuous illumination in intact cells. NO inhibited the re-reduction of cytochrome c, the slow phase of the carotenoid bandshift, and the oxidation of cytochrome b after a flash illumination, suggesting that NO inhibited the photosynthetic cyclic electron transfer through the cytochrome b-c ₁ region. NO also inhibited the nitrite (NO ₂ ^- ) and NO reductions with succinate as the electron donor in intact cells, but did not inhibit the NO ₂ ^- and NO reductions in chromatophore membranes with ascorbate and phenazine methosulfate as the electron donors. NO reversibly inhibited the ubiquinol: cytochrome c oxidoreductase of the membranes, suggesting that NO inhibited the electron transfer through the cytochrome b-c ₁ region and that the cytochrome b-c ₁ complex also was involved in the electron transport in both NO ₂ ^- and NO reductions. The catalytic site of NO reduction was distinct from the inhibitory site of NO.Abbreviations UHDBT 5-undecyl-6-hydroxy-4,7-dioxobenzothiazole - UHNQ 3-undecyl-2-hydroxy-1,4-naphthoquinone - MOPS 3-(N-morpholino)propane-sulfonic acid - PMS phenazine methosulfate - DCIP 2,6-dichlorophenol indophenol - DDC diethyl-dithiocarbamate     

Uptake of technetium by freshwater green microalgae

Summary Accumulation of [⁹⁹Tc]pertechnetate ions (⁹⁹TcO₄ ^–) by the freshwater microalgae Chlorella emersonii, Chlamydomonas reinhardtii and Scenedesmus obliquus has been characterized. In all three species, accumulation consisted of a single rapid energy-independent phase (biosorption), and no energy-dependent accumulation was observed. Biosorption of ⁹⁹TcO _inf4 ^sup– by all three species was concentration dependent, followed a Freundlich adsorption isotherm, and was dependent on pH with increased accumulation by cells with decreasing external pH. Elevated external NaCl concentrations also caused increased accumulation of ⁹⁹TcO _inf4 ^sup– by the cells, as did increased external osmotic potential. Concentrations of K⁺, Mg²⁺ and Ca²⁺ increased accumulation of ⁹⁹TcO _inf4 ^sup– , but concentrations of HCO _inf3 ^sup– , SO _inf4 ^sup2– and CO _inf3 ^sup2– decreased ⁹⁹TcO _inf4 ^sup– accumulation by the cells. Most of the ⁹⁹TcO _inf4 ^sup– accumulated by all three species was easily desorbed by 10 mm buffers at various pH values, 0.5 m NaCl, 10 mm Na₂CO₃ or 10 mm Na₂SO₄. No differences in the amount of desorption were observed between the various desorption agents used. Correspondence to: G. M. Gadd     

Nitrogen and phosphorus uptake by the Brazilian kelp Laminaria abyssalis (Phaeophyta) in culture

The uptake of ammonium, nitrate and phosphate by laboratory-grown young sporophytes of Laminaria abyssalis was measured in a perturbed system (batch mode) at 18 °C and 35 ± 5 µE m^–2 s^–1 photon flux density. Uptake of all appeared to follow saturation-type nutrient uptake kinetics. The NO _inf3 ^sup– (K _s = 14.0 µM, V _max = 5.0 µmol h^–1 g^–1 dry wt) and NH _inf4 ^sup+ (K _s = 4.6 µM, V _max= 2.0 µmol h^–1 g^–1 dry wt) were taken up simultaneously, although NH _inf4 ^sup+ was taken up more rapidly. Values of K ₃ and V _max for phosphate were, respectively, 2.21 µM and 0.83 µmol h^–1 g^–1 dry wt. Nitrate and phosphate were both consumed in similar rates (V _max /Ks 0.37) at low concentrations. NH _inf4 ^sup+ , thus, might be a more efficient form of N fertilizer if artificial enrichment of seawater is used.     

Investigation of the form of selenium in the hydrogenase from chemolithotrophically cultured Bradyrhizobium japonicum

It has been established that the hydrogenase from autotrophically cultured Bradyrhizobium japonicum contains selenium as a bound constituent. About 80% of the enzyme selenium remains bound during precipitation with 5% trichloroacetic acid (TCA). However, 85% of the selenium bound to the enzyme is released by a combined treatment of urea, heat and TCA. Neither selenomethionine nor selenocysteine could be detected on analysis of anaerobically hydrolyzed enzyme. These results are consistent with the report showing that the structural genes for this enzyme do not contain a TGA codon (Sayavedra-Soto et al. 1988) which has been reported to code for selenocysteine incorporation into several proteins (Chambers et al. 1986; Zinoni et al. 1986; Stadtman 1987). We have demonstrated that ⁷⁵Se from the labeled hydrolyzed enzyme forms the derivative' selenodicysteine. The form of selenium resulting in the synthesis of this derivative apparently is SeO _inf3 ^sup= or a compound such as Se⁼ which is easily oxidized to SeO _inf3 ^sup= . In a separate approach it was established that 12–16% of the total ⁷⁵Se in the native enzyme reacted with 2,3-diaminonaphthalene indicating that this fraction was present as SeO _inf3 ^sup= . The remaining ⁷⁵Se was bound to the enzyme protein. From this research, we concluded that Se in Bradyrhizobium japonicum hydrogenase is present in a labile bound form. In this respect, this enzyme is similar to xanthine dehydrogenase and nicotinic acid hydroxylase, both of which contain labile Se constituents that have not been defined.Technical paper no. 8980 from the Oregon Agricultural Experiment Station     

Natural and man-caused factors affecting the abundance and cycling of dissolved organic substances in precambrian shield lakes

A study on nutrient regeneration processes and a measure of their fluxes at the sediment-water interface was carried out in two different stations of a shallow lagoon of the Po delta river (Italy). A few parameters on the solid fraction (grain-size, porosity, C, N) and pore water profiles of o-P, NH₃, NO _inf3 ^sup– , SiO₂, Tot-CO₂, SO _inf4 ^sup2– , Fe, Mn, Ca, Mg, pH, Eh were determined. At both stations the results were typical for fine sediments rich in organic matter. The ratio of variations of sulphate (SO _inf4 ^sup2– ) to total carbonate demonstrates the main role sulphate reduction plays on the organic matter decay. The use of the ratios of variations of sulphate (SO _inf4 ^sup2– ) to ammonia (NH₃) and of sulphate (SO _inf4 ^sup2– ) to phosphate (o-P) in pore waters enabled us to calculate the C/N/P of the decomposing organic matter. Obtained C/N/P indicated an enrichment of N and P with regard to C/N/P ratios of the solid fraction, due to the selective stripping of N and P during organic matter mineralization. This phenomenon decreases with depth, where organic matter becomes more refractory. Calculations on saturation degrees have shown the possibility of authigenic calcite, apatite and rhodochrosite precipitation in sediments. Nutrient fluxes were estimated for SiO₂, NH₃ and o-P by means of benthic chambers and modelling the pore water profiles. The model used for the calculation of fluxes allowed us to account for the bioturbation-irrigation influence near the interface, by means of a cumulative diffusion coefficient. Directly measured fluxes proved to be always significantly greater than the theoretical ones. These differences seem to be due to surface processes which do not affect pore water concentrations (degradation of fresh materials at the interface; micro-bioturbation by small gasteropoda such as Hydrobia ventrosa) and/or to the different concept of the two methods in time and space. Number, size and biomass of macrobenthic species living in the sediment underneath the benthic chambers were determined. The comparison between data on macrobenthic populations and flux values showed a good relationship between the number of organisms and benthic fluxes within each station. However, flux variations between stations are to be attributed mainly to the different arrangement of the tubes of the polychaetes Polydora ciliata in the sediment.     

Complementation of a pleiotropic Nif-Gln regulatory mutant of Rhodospirillum rubrum by a previously unrecognized Azotobacter vinelandii regulatory locus

A spontaneous pleiotropic Nif^- mutation in Rhodospirillum rubrum has been partially characterized biochemically and by complementation analysis with recombinant plasmids carrying Azotobacter vinelandii DNA in the vicinity of ORF12 [Jacobson et al. (1989) J. Bacteriol 171:1017–1027]. In addition to being unable to grow on N₂ as a nitrogen source the phenotypic characterization of this and other metronidazole enriched spontaneous mutants showed (a) no nitrogenase activity, (b) the absence of NifHDK polypeptides, (c) a slower growth rate on NH _inf4 ^sup+ , (d) approximately 50% higher glutamine synthetase (GS) activity than the wild-type, which was repressible, (e) an inability to switch-off GS activity in response to an NH _inf4 ^sup+ up-shift, and (f) an inability to modify (³²P-label) the GS polypeptide. The apparent relationship between the absence of nifHDK expression and the absence of GS adenylylation cannot be explained in terms of the current model for nif gene regulation. However, R. rubrum transconjugants receiving A. vinelandii DNA which originated immediately upstream from nifH, restored all aspects of the wild-type phenotype. These data suggest a here-to-fore unrecognized relationship between nif expression and GS switch-off (adenylylation) activity, and the existence of a previously unidentified regulatory locus in Azotobacter that complements this mutation.     

A method for removal of toxic chromium using dialysis-sac cultures of a chromate-reducing strain of Enterobacter cloacae

Summary A method for removal of toxic hexavalent chromium (chlomate: CrO _inf4 ^sup2– ) was developed by use of dialysis-sac cultures of a chromate-reducing strain of Enterobacter cloacae (HO1). E. cloacae strain HO1 cells were put in dialysis (semipermeable membrane) sacs, and the sacs were submerged in water containing toxic CrO _inf4 ^sup2– . The dialysis sacs allowed CrO _inf4 ^sup2– to diffuse into the culture, and CrO _inf4 ^sup2– was reduced anaerobically in the dialysis sacs by the E. cloacae cells. Because reduced chromium readily formed insoluble chromium hydroxides in the dialysis sacs, the greater part of reduced chromium was unable to diffuse out through the semipermeable membrane. Thus the dialysis culture of E. cloacae strain HO1 could successfully remove toxic chromium from the surrounding water. If the initial concentration of CrO _inf4 ^sup2– was less than 4mM (208 ppm as chromium), about 90% of the total chromium could be removed from water by the described method. Offprint requests to: H. Ohtake