Biometeorology and animal protein production: the case of arid lands

To meet the food demands of the ever-increasing world population, man's only major future land bank is the arid lands. However, their exploitation has been limited and constitutes a major challenge to many scientific disciplines. Under the present conditions of hunger and/or malnutrition, a large-scale expansion in food production is not to be expected. Hence, it is imperative that in any development programme for arid lands, malnutrition, in general, and a deficiency of animal proteins, in particular, should be considered. Major advancements have been made, but much remains to be learned and implemented. Improvement of native farm animals should be the first step in increasing the availability of animal proteins. This may be achieved by an educational programme to enhance management, housing, food intake, etc. Then a breeding programme selecting for high productivity can be pursued. After eliciting the maximum return from the present livestock, attention should be directed to domesticating wild ungulates and/or introducing highly productive temperature-zone breeds for upgrading the local animals. Additionally, new potential and unconventional sources of animal proteins must be explored. Aquaculture, in particular, has the potential of producing large quantities of lowercost protein-rich food. Available evidence in arid regions of the developed countries, i.e. USA and Australia, promises favourable results in our efforts toward increasing the production of animal protein. By innovative methods and long-term planning, such successes can be adapted and transferred to other regions of the world, with the aim of gradually lessening the present state of malnutrition and hunger.     

Application of molecular techniques on heterotrophic hydrogen production research

This paper reviews the application of molecular techniques in heterotrophic hydrogen production studies. Commonly used molecular techniques are introduced briefly first, including cloning-sequencing after polymerase chain reaction (PCR), denaturing gradient gel electrophoresis (DGGE), terminal-restriction fragment length polymorphism (T-RFLP), fluorescence in situ hybridization (FISH) and quantitative real-time PCR. Application of the molecular techniques in heterotrophic hydrogen production studies are discussed in details, focusing on identification of new isolates for hydrogen production, characterization of microbial compositions in bioreactors, monitoring microbial diversity variation, visualization of microbial distribution in hydrogen-producing granular sludge, and quantification of various microbial populations. Some significant findings in recent hydrogen production studies with the application of molecular techniques are discussed, followed by a research outlook of the heterotrophic biohydrogen field.     

生态系统服务建模技术研究进展

在生态系统服务评估模型的数量、类型及应用大量增加的背景下,为将生态系统服务评估有效整合到决策中,系统比较、甄别不同建模工具并筛选出适合决策需求的生态系统服务评估和模拟方法尤为必要。因此,归纳并总结了国内外现有的生态系统服务评估模型的建模技术,包括:相关关系法、生物-物理过程法以及专家知识法;分别对其原理、差异、优缺点以及适用性进行了详尽阐释。大多数相关模型侧重于统计关系,相对容易创建和扩展,适用于生态系统服务的初始评估;生物-物理过程模型难以构建且不易获取,但提供了探索人-地系统相互作用和长期变化的有效机制;专家知识法有效结合了多种类型的知识体系,关注人类社会与自然系统之间反馈和交互动态的系统整合,但当评估地点发生变化时难以验证。在此基础上,介绍了基于上述3种建模技术的典型生态系统服务综合评估模型的发展和应用现状。各类建模技术面临着实用性和科学准确性之间的权衡。通过对不同建模技术的梳理与整合分析旨在提升当前生态系统服务研究的决策支撑能力,并为国内相关研究提供参考和借鉴。     

Role of nuclear analytical probe techniques in biological trace-element research

Many biomedical experiments require the qualitative and quantitative localization of trace elements with high sensitivity and good spatial resolution. The feasibility of measuring the chemical form of the elements, the time course of trace element metabolism, and conducting experiments in living biological systems are also important requirements for biological trace element research. Nuclear analytical techniques that employ ion or photon beams have grown in importance in the past decade and have led to several new experimental approaches. Some of the important features of these methods are reviewed here along with their role in trace element research. Examples of their use are given to illustrate potential for new research directions. It is emphasized that the effective application of these methods necessitates a closely integrated multidisciplinary scientific team.     

Costly young and reproductive skew in animal societies

Many recent models of reproductive skew explain subordinatereproduction as a staying incentive offered by dominants, whocan produce more young with a helper present than without. Here,we present a new, alternative explanation for subordinate reproduction,which applies whenever the fitness cost to a parent of producingyoung is an accelerating function of the number produced (ascommonly assumed in optimal clutch size theory). Under these circumstances,a dominant individual may be selected to offer a share of reproductionto a related subordinate, not as an incentive to stay, but becauseadditional offspring that would be expensive for the dominantto produce are cheap for the subordinate. "Beneficial sharing"of this kind is more likely the more closely related the subordinateis to the dominant, so that the model predicts a negative relationshipbetween skew and relatedness. This result runs directly counterto the positive relationship predicted by previous incentive-basedmodels. We explore the interaction of these contrasting effectsby developing an integrated model that allows for both beneficialsharing and staying incentives. When offspring are cheap to produce,this integrated model predicts that the incentive effect will dominate,and skew will increase with relatedness. When young are costly,in contrast, beneficial sharing will be of greater importance,and skew will decrease with relatedness.     

The Pig PeptideAtlas: A resource for systems biology in animal production and biomedicine

Biological research of Sus scrofa, the domestic pig, is of immediate relevance for food production sciences, and for developing pig as a model organism for human biomedical research. Publicly available data repositories play a fundamental role for all biological sciences, and protein data repositories are in particular essential for the successful development of new proteomic methods. Cumulative proteome data repositories, including the PeptideAtlas, provide the means for targeted proteomics, system‐wide observations, and cross‐species observational studies, but pigs have so far been underrepresented in existing repositories. We here present a significantly improved build of the Pig PeptideAtlas, which includes pig proteome data from 25 tissues and three body fluid types mapped to 7139 canonical proteins. The content of the Pig PeptideAtlas reflects actively ongoing research within the veterinary proteomics domain, and this article demonstrates how the expression of isoform‐unique peptides can be observed across distinct tissues and body fluids. The Pig PeptideAtlas is a unique resource for use in animal proteome research, particularly biomarker discovery and for preliminary design of SRM assays, which are equally important for progress in research that supports farm animal production and veterinary health, as for developing pig models with relevance to human health research.     

High yield expression and purification of isotopically labelled human endothelin-1 for use in NMR studies

Human endothelin-1 (ET-1) is a potent vasocontractile 21-residue peptide hormone with significant pharmacological importance. An efficient and straightforward expression strategy that enables cost-effective incorporation of stable isotopes is not available thus far. In this report, we describe a cost-effective expression system in Escherichia coli for the production of ET-1 enriched with (15)N and (13)C isotopes. Employing thioredoxin as carrier protein, specific and nearly quantitative cleavage of ET-1 from the fusion was mediated by Factor Xa, and purification to homogeneity (final purity of >95%) was achieved by RP-HPLC. Purified recombinant ET-1 was found to be indistinguishable from the synthetic counterpart as determined by mass spectrometry and NMR spectroscopy. Our expression strategy offers the potential for production of isotopically labeled ET-1 in large (mg) quantities for the purpose of heteronuclear NMR experiments. Moreover, the method devised should be applicable for recombinant expression of small peptides in general.     

A review of pain assessment techniques and pharmacological approaches to pain relief after bovine castration: Practical implications for cattle production within the United States

Castration of male calves destined for beef production is a common livestock management practice in the United States amounting to approximately 7 million procedures per year. Recently there has been renewed interest in identifying methods to reduce pain associated with dehorning and castration. Although several studies have reported that analgesic drug administration prior to castration attenuates plasma cortisol response, there are currently no compounds specifically approved for pain relief in livestock in the U.S. Validated pain assessment tools are needed to support regulatory approval of analgesic compounds. This may include use of accelerometers, videography, heart rate variability determination, electroencephalography, thermography and plasma neuropeptide measurement to assess behavioral, physiological and neuroendocrine changes associated with a pain response. Extra-label drug use (ELDU) for pain relief is regulated under the Animal Medicinal Drug Use Clarification Act (AMDUCA) and requires that drugs be administered by or under the supervision of a veterinarian. Agents that may provide preemptive analgesia include local anesthetics, nonsteroidal anti-inflammatory drugs (NSAIDs), opioids, α2-agonists, and N-methyl d-aspartate (NMDA) receptor antagonists. A review of the published literature suggests that a significant decrease in plasma cortisol concentration after castration was associated with preemptive administration of a NSAID and local anesthesia. Local anesthesia alone tended to decrease peak plasma cortisol concentrations more than NSAIDs. However NSAIDs alone tended to decrease the area under the plasma cortisol-time curve more than local anesthesia alone. These findings suggest that multimodal analgesic regimens that extend into the post-operative period are more effective at mitigating pain and distress associated with castration than a single drug modality. Regulatory approval of safe and cost effective analgesic compounds with convenient routes of administration is needed for routine use of pain relieving drugs to be considered as standard practice at the time of castration.     

Short-chain fatty acids and poly-β-hydroxyalkanoates: (New) Biocontrol agents for a sustainable animal production

Because of the risk of antibiotic resistance development, there is a growing awareness that antibiotics should be used more carefully in animal production. However, a decreased use of antibiotics could result in a higher frequency of pathogenic bacteria, which in its turn could lead to a higher incidence of infections. Short-chain fatty acids (SCFAs) have long been known to exhibit bacteriostatic activity. These compounds also specifically downregulate virulence factor expression and positively influence the gastrointestinal health of the host. As a consequence, there is currently considerable interest in SCFAs as biocontrol agents in animal production. Polyhydroxyalkanoates (PHAs) are polymers of β-hydroxy short-chain fatty acids. Currently, PHAs are applied as replacements for synthetic polymers. These biopolymers can be depolymerised by many different microorganisms that produce extracellular PHA depolymerases. Interestingly, different studies provided some evidence that PHAs can also be degraded upon passage through the gastrointestinal tract of animals and consequently, adding these compounds to the feed might result in biocontrol effects similar to those described for SCFAs.     

A test of statistical techniques for detecting density dependence in sequential censuses of animal populations

Summary Principal and reduced major axes, and Bulmer's (1975) tests have been suggested as methods for detecting the presence of density dependence in a series of population censuses that are unsuitable for analysis by alternative means e.g. by k-factor analysis. These alternative methods are tested using census data, some of which are previously unpublished, from natural populations known from independent evidence to be subject to density dependent processes. All the methods fail to detect density dependence reliably, irrespective of sample size and the dynamics of the population. We conclude that none of the methods tested is sufficiently reliable to be useful as a test of density dependence in sequential censues of animal populations.     

Review: Deciphering animal robustness. A synthesis to facilitate its use in livestock breeding and management

As the environments in which livestock are reared become more variable, animal robustness becomes an increasingly valuable attribute. Consequently, there is increasing focus on managing and breeding for it. However, robustness is a difficult phenotype to properly characterise because it is a complex trait composed of multiple components, including dynamic elements such as the rates of response to, and recovery from, environmental perturbations. In this review, the following definition of robustness is used: the ability, in the face of environmental constraints, to carry on doing the various things that the animal needs to do to favour its future ability to reproduce. The different elements of this definition are discussed to provide a clearer understanding of the components of robustness. The implications for quantifying robustness are that there is no single measure of robustness but rather that it is the combination of multiple and interacting component mechanisms whose relative value is context dependent. This context encompasses both the prevailing environment and the prevailing selection pressure. One key issue for measuring robustness is to be clear on the use to which the robustness measurements will employed. If the purpose is to identify biomarkers that may be useful for molecular phenotyping or genotyping, the measurements should focus on the physiological mechanisms underlying robustness. However, if the purpose of measuring robustness is to quantify the extent to which animals can adapt to limiting conditions then the measurements should focus on the life functions, the trade-offs between them and the animal’s capacity to increase resource acquisition. The time-related aspect of robustness also has important implications. Single time-point measurements are of limited value because they do not permit measurement of responses to (and recovery from) environmental perturbations. The exception being single measurements of the accumulated consequence of a good (or bad) adaptive capacity, such as productive longevity and lifetime efficiency. In contrast, repeated measurements over time have a high potential for quantification of the animal’s ability to cope with environmental challenges. Thus, we should be able to quantify differences in adaptive capacity from the data that are increasingly becoming available with the deployment of automated monitoring technology on farm. The challenge for future management and breeding will be how to combine various proxy measures to obtain reliable estimates of robustness components in large populations. A key aspect for achieving this is to define phenotypes from consideration of their biological properties and not just from available measures.     

Composting of animal manures and chemical criteria for compost maturity assessment. A review

New livestock production systems, based on intensification in large farms, produce huge amount of manures and slurries without enough agricultural land for their direct application as fertilisers. Composting is increasingly considered a good way for recycling the surplus of manure as a stabilised and sanitised end-product for agriculture, and much research work has been carried out in the last decade. However, high quality compost should be produced to overcome the cost of composting.     

Foam nest production in the armoured catfish

Foam nest production in Hoplosternum littorale is described in detail. This fish produces foam, while swimming belly-up, by pumping water over the gills and using their pelvic fins to mix water and mucus. The bubbles resulting from this process are added to plant debris carried by the male, which possesses a specialized pectoral fin spine to perform such activity.     

我国畜禽生产体系中磷素平衡及其环境效应

通过畜禽生产体系磷素的实际流动过程——磷素输入和磷素输出,计算了畜禽生产体系磷素的去向,包括畜禽活体磷素去向,不同养殖方式粪尿磷素去向;并对畜禽粪尿回田、排入环境等状况进行了评价。结果表明,从动物体磷分配来说,畜禽活体带出的磷大部分分配在骨中,肉猪骨中的磷素占活体带出磷的71.5%,肉鸡骨中的磷素占活体带出磷的71.1%,肉牛骨中的磷素占活体带出磷的71.6%。计算还表明:蛋鸡和肉猪生产体系对环境造成的污染风险相对其他畜禽生产体系来说最大,中国2001年蛋鸡生产体系向环境排放磷量为30.8万t,占猪牛鸡向环境排放总磷量的43.0%;肉猪生产体系向环境排放磷量为15.3万t,占猪牛鸡向环境排放总磷量的21.3%。还对未来畜禽发展规模以及降低污染提出了一些建议。     

Reproductive biology of the 38 extant felid species: a review

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Review of metabolic pathways activated in cancer cells as determined through isotopic labeling and network analysis

Cancer metabolism has emerged as an indispensable part of contemporary cancer research. During the past 10 years, the use of stable isotopic tracers and network analysis have unveiled a number of metabolic pathways activated in cancer cells. Here, we review such pathways along with the particular tracers and labeling observations that led to the discovery of their rewiring in cancer cells. The list of such pathways comprises the reductive metabolism of glutamine, altered glycolysis, serine and glycine metabolism, mutant isocitrate dehydrogenase (IDH) induced reprogramming and the onset of acetate metabolism. Additionally, we demonstrate the critical role of isotopic labeling and network analysis in identifying these pathways. The alterations described in this review do not constitute a complete list, and future research using these powerful tools is likely to discover other cancer-related pathways and new metabolic targets for cancer therapy.     

Effects of restricted feeding of prepubertal ewe lambs on reproduction and lactation performances over two breeding seasons

The aim of this study was to determine the effects of restricted feeding before puberty on reproduction, lactation and offspring growth performance in replacement ewe lambs over two breeding seasons. At weaning, 41 Dorset ewe lambs were assigned to one of three diets: an ad libitum control diet with medium-quality forage (MQF; 13.3% crude protein (CP), 1.81 Mcal metabolizable energy per kg, 42.8% ADF; diet A-MQF); a restricted diet with the same forage as A but less feed concentrate (diet R-MQF); or a high-quality forage (HQF) diet (14.8% CP, 2.15 Mcal ME/kg, 34.7% ADF; diet F-HQF). The quantity of concentrate offered to the group R-MQF and F-HQF ewe lambs was adjusted to obtain 70% of the control ewe lambs' growth rate. The diets were offered for 75 days following weaning to cover the allometric phase of mammary gland development. Prepubertal restriction did not affect (P > 0.10) the gestation rate, number of lambs born or the body weight and body condition score of ewes at lambing or at the end of lactation. Ewes from groups R-MQF and F-HQF tended to produce more milk during their first lactation compared to those from group A-MQF (P = 0.07). During the second lactation, groups R-MQF and F-HQF had better standardized milk production than group A-MQF (P < 0.05), and group R-MQF produced more milk than group F-HQF (P < 0.05). Milk fat and protein content were not affected by treatments (P > 0.10) Fat and protein yield were affected by treatments only at the second lactation (P < 0.10 and P < 0.05, respectively). Lamb birth and weaning weights were not affected by prepubertal restriction of feeding in their mother (P > 0.10). However, the average daily gain of second breeding season lambs was higher for the R-MQF group than the F-HQF group (P < 0.05), and a similar trend was observed for total gain (P < 0.10). Restricted feeding before puberty does not impair future reproductive performance; however, it has a positive impact on lactation and on lambs' growth performance.