Field and experimental studies of hybridization between coral trouts, Plectropomus leopardus and Plectropomus maculatus(Serranidae), on the Great Barrier Reef, Australia

Spawning aggregations of closely‐related coral trouts, Plectropomus leopardus and Plectropomus maculatus , were found to overlap in time and space on the Great Barrier Reef, thus providing opportunities for accidental hybridization by juxtaposition of heterospecific gametes. The relative abundance and mating strategy of coral trouts also favoured hybridization, since mates could be either rare in some habitats or monopolized by dominant fishes. In the latter case, sneak spawning may have occurred, even when behavioural barriers to reproduction ( e.g . assortative mating) were operational. When heterospecific gametes were experimentally mixed, fertilization occurred and hybrid larvae developed. It was concluded that there was considerable opportunity for natural hybridization between coral trouts of the genus Plectropomus .     

Prosorhynchine trematodes (Digenea: Bucephalidae) from epinephelines (Perciformes: Serranidae) on the Great Barrier Reef,Australia

Six new species of bucephalid trematodes from the prosorhynchine bucephalid genera Prosorhynchus Odhner, 1905 and Neidhartia Nagaty, 1937 are reported from the epinepheline genera Cephalopholis, Cromileptes, Epinephelus and Variola on the Great Barrier Reef, Australia. Two species of Prosorhynchus and one of Neidhartia are reported from Epinephelus spp., P. jexi n. sp. from E. quoyanus, P. lafii n. sp. from E. fuscoguttatus and N. epinepheli n. sp. from E. maculatus. The other three new species are P. robertsthomsoni n. sp. from Cephalopholis argus, C. cyanostigma and C. miniata, P. conorjonesi n. sp. from Cromileptes altivelis, and P. milleri n. sp. from Variola louti. Extensive examinations of other piscivorous fish species from the Great Barrier Reef have not revealed these six bucephalid species, which appear to be restricted at least to the host genera from which they are reported here.     

Reproductive Biology of the Halfmoon Grouper, Epinephelus rivulatus, at Ningaloo Reef, Western Australia

The reproductive biology and sexual pattern of Epinephelus rivulatus were examined within the waters of Ningaloo Reef, Western Australia. Population structure and gonad morphology show that E. rivulatus is a protogynous hermaphrodite. Mature females ranged in size from 144 to 350mm fork length (FL), with 50% sexually mature at 194mm FL. Males were larger than females and ranged in size from 221 to 381mm FL. There were also intrasexual differences in body size and the median size at which sex-change occurred within each site. Sex ratios were consistent between sites with approximately one male to 5.5 mature females. Most female E. rivulatus (>50%) were reproductively active from July to December when water temperatures were relatively cool and daylight hours were increasing. During this time reproduction occurred periodically, and a female was capable of spawning at least twice over two or three consecutive days.     

Movement in a large predatory fish: coral trout, Plectropomus leopardus (Pisces: Serranidae), on Heron Reef, Australia

 Movement by the larger more mobile species of coral reef fish plays a significant role in determining patterns in abundance and population structure. Fish movement is also relevant to the use and effectiveness of marine reserves in managing fish populations. Coral trout are large piscivorous serranids supporting major fisheries on the Great Barrier Reef (GBR). This study reports on the within-reef movement of the common coral trout, Plectropomus leopardus, at Heron Reef, southern GBR, over a twelve month period, investigated by tagging and underwater tracking. Tracking of coral trout revealed no apparent relationship between the area moved and stage of tide or time of day. However, movement areas were affected by the size of fish: in spring a linear relationship between fish size and area of movement was measured, but in summer the largest (male) fish moved over significantly smaller areas than medium-sized fish. Movement of males may be related to cleaning behaviour and spawning. Fifty nine percent (n=101) of the tagged fish were resighted over periods of 4–5 months, in “home sites” measuring ∼2000 m². Coral trout were not restricted to home sites, but moved on average 2 km along the reef slope; maximum distances of 7–7.5 km were measured. Coral trout appear to range as mobile, opportunistic predators, but also maintain home sites for access to shelter and cleaning stations. Accepted: 1 August 1996     

Habitat preference in newly settled coral trout (Plectropomus leopardus, Serranidae)

 The densities of newly settled coral trout (Plectropomus leopardus, Pisces, Serranidae) were monitored in a variety of habitats on Green Reef in the Cairns section of the Great Barrier Reef to assess whether spatial patterns of recruitment are influenced by physical features of the substratum, and whether this species uses different habitats during its ontogeny. Surveys showed that small juveniles used sites that were significantly different from random and that these habitat associations changed as the fish grew larger. Specifically, coral trout recruited to level patches of rubble substrata >5 m² and subsequently shifted to high relief features. Densities of recruits were related to the amount of rubble substrata available. Accepted: 4 July 1996     

Contrasting patterns of reef utilization and recruitment of coral trout (Plectropomus leopardus) and snapper (Lutjanus carponotatus) at One Tree Island, southern Great Barrier Reef

Patterns of abundance, age structure and recruitment of coral trout (Plectropomus leopardus) and snapper (Lutjanus carponotatus) were described in different environments, which varied in benthic cover, in a 12-yr study at One Tree Island. It was hypothesized that both taxa would show strong preferences to different environments and benthic cover and that patterns would be consistent through time. Plectropomus leopardus were abundant on the reef slope and seaward edge of the lagoon, where live coral cover was high, and recruitment was generally low, in all environments. The population was sustained by a trickle of recruits, and total abundance varied little after 10 to 25 yr of protection in a no-take area, suggesting P. leopardus had reached an environment-related carrying capacity. Protogynous P. leopardus recruited to shallow environments at sites with 20% or more hard live coral and age data indicated the abundance of fish on the reef slope was from redistribution. Most recruits of gonochoristic L. carponotatus (<150 mm Standard length, SL) were found in the lagoonal environments, and adults were rare on the reef slope. Abundance of recruit L. carponotatus and P. leopardus did not correlate with percent cover of live and soft coral within environments. Recruits of L. carponotatus were usually rare in all lagoonal environments, but in 2003, many recruits (80 to 120 mm SL) were found in lagoonal environments with low and high hard live coral cover. A substantial proportion of the population (age max 18 yr) was from strong recruitment events. In 2003 and 2004, total abundance of L. carponotatus was supported by 1 year class 51.7 and 41% respectively. The utilization of environments and types of substrata varied among taxa and in some cases among life-history stages. There was also temporal variation in the importance of some environments (e.g. Lagoon Centre).     

Symbiodinium (Dinophyceae) community patterns in invertebrate hosts from inshore marginal reefs of the southern Great Barrier Reef,Australia

The broad range in physiological variation displayed by Symbiodinium spp. has proven imperative during periods of environmental change and contribute to the survival of their coral host. Characterizing how host and Symbiodinium community assemblages differ across environmentally distinct habitats provides useful information to predict how corals will respond to major environmental change. Despite the extensive characterizations of Symbiodinium diversity found amongst reef cnidarians on the Great Barrier Reef (GBR) substantial biogeographic gaps exist, especially across inshore habitats. Here, we investigate Symbiodinium community patterns in invertebrates from inshore and mid‐shelf reefs on the southern GBR, Australia. Dominant Symbiodinium types were characterized using denaturing gradient gel electrophoresis fingerprinting and sequencing of the ITS2 region of the ribosomal DNA. Twenty one genetically distinct Symbiodinium types including four novel types were identified from 321 reef‐invertebrate samples comprising three sub‐generic clades (A, C, and D). A range of host genera harbored C22a, which is normally rare or absent from inshore or low latitude reefs in the GBR. Multivariate analysis showed that host identity and sea surface temperature best explained the variation in symbiont communities across sites. Patterns of changes in Symbiodinium community assemblage over small geographic distances (100s of kilometers or less) indicate the likelihood that shifts in Symbiodinium distributions and associated host populations, may occur in response to future climate change impacting the GBR.     

Effectiveness of benthic foraminiferal and coral assemblages as water quality indicators on inshore reefs of the Great Barrier Reef, Australia

Although the debate about coral reef decline focuses on global disturbances (e.g., increasing temperatures and acidification), local stressors (nutrient runoff and overfishing) continue to affect reef health and resilience. The effectiveness of foraminiferal and hard-coral assemblages as indicators of changes in water quality was assessed on 27 inshore reefs along the Great Barrier Reef. Environmental variables (i.e., several water quality and sediment parameters) and the composition of both benthic foraminiferal and hard-coral assemblages differed significantly between four regions (Whitsunday, Burdekin, Fitzroy, and the Wet Tropics). Grain size and organic carbon and nitrogen content of sediments, and a composite water column parameter (based on turbidity and concentrations of particulate matter) explained a significant amount of variation in the data (tested by redundancy analyses) in both assemblages. Heterotrophic species of foraminifera were dominant in sediments with high organic content and in localities with low light availability, whereas symbiont-bearing mixotrophic species were dominant elsewhere. A similar suite of parameters explained 89% of the variation in the FORAM index (a Caribbean coral reef health indicator) and 61% in foraminiferal species richness. Coral richness was not related to environmental setting. Coral assemblages varied in response to environmental variables, but were strongly shaped by acute disturbances (e.g., cyclones, Acanthaster planci outbreaks, and bleaching), thus different coral assemblages may be found at sites with the same environmental conditions. Disturbances also affect foraminiferal assemblages, but they appeared to recover more rapidly than corals. Foraminiferal assemblages are effective bioindicators of turbidity/light regimes and organic enrichment of sediments on coral reefs.     

Two new blood flukes (Digenea: Sanguinicolidae) from Epinephelinae (Perciformes: Serranidae) of the Pacific Ocean

Pearsonellum pygmaeus n. sp. is described from Cromileptes altivelis (Serranidae), the Barramundi Cod, from Heron Island (southern Great Barrier Reef) and Lizard Island (northern Great Barrier Reef). This new species differs from Pearsonellum corventum (type and only species) in the combination of smaller overall body size, the relative distance of the brain from the anterior end, the relative lengths of both the oesophagus and the testis, the degree to which the testis extends outside the intercaecal field, the shape of the testis, the shape and size of the ovary and the extent to which the uterus loops around the ovary. There are in addition, 20 base pair differences between the ITS2 rDNA sequence of P. pygmaeus n. sp. and that of P. corventum. Three new host records for P. corventum are reported. Adelomyllos teenae n. g., n. sp. is described from Epinephelus coioides (Serranidae), the Estuary Cod, from Moreton Bay, southeast Queensland. The new genus differs from the 22 other sanguinicolid genera in the combined possession of two testes, a cirrus-sac, separate genital pores, a post-ovarian uterus and an H-shaped intestine. A. teenae n. sp. is the third sanguinicolid described from the Epinephelinae. Sanguinicolids have now been reported from 11 species of Serranidae.     

Isolation and characterization of polymorphic microsatellites from red coral grouper (Plectropomus maculatus)

The red coral grouper, Plectropomus maculatus, is a high value marine food fish species. We isolated the first set of 10 polymorphic microsatellites and examined their polymorphism in two related species: the Malabar grouper Epinephelus malabaricus and the brown‐marbled grouper Epinephelus fuscoguttatus. The average allele number of these 10 microsatellite DNA loci is 9.1/locus with a range of four to 17, whereas the expected heterozygosity ranged from 0.18 to 0.94, averaging 0.76. Five of the 10 markers amplified polymorphic and specific products in E. malabaricus, whereas only four were amplified in E. fuscoguttatus. These microsatellites could be applicable to captive breeding and to the studies on genetic diversity and population structure of grouper wild stocks.     

Copepoda associated with the coral Gardineroseris planulata (Dana) on the Great Barrier Reef,northeastern Australia

Three new lichomolgid copepods associated with the scleractinian Gardineroseris planulata (Dana) are described: Sociellus torus, n. gen., n. sp., characterized by a 2-segmented endopod in leg 3 and the lack of an inner seta on the first segment of the endopod in legs 1–3; Odontomolgus pumilus, n. sp., of very small size and having a much elongated free segment in leg 5 of the female; and Paramolgus ampullaceus, n. sp., distinguished by the bottle-shaped genital segment of the female. In addition, the harpacticoid Alteuthellopsis corallina Humes, 1981, is reported from this coral. With the inclusion of 3 species of the poecilostomatoid genus Xarifia already described (Humes, 1985) there are now 7 species of copepods known to be associated with Gardineroseris planulata on the Great Barrier Reef.     

Unusual shallow water Devonian coral community from Queensland and its recent analogues from the inshore Great Barrier Reef

Coral Reefs - Palaeozoic coral communities were dominated by two extinct coral groups: Tabulata and Rugosa. Whilst they are not closely related to modern Scleractinia, they are morphologically...     

Benthic microalgae in coral reef sediments of the southern Great Barrier Reef,Australia

The abundance and productivity of benthic microalgae in coral reef sediments are poorly known compared with other, more conspicuous (e.g. coral zooxanthellae, macroalgae) primary producers of coral reef habitats. A survey of the distribution, biomass, and productivity of benthic microalgae on a platform reef flat and in a cross-shelf transect in the southern Great Barrier Reef indicated that benthic microalgae are ubiquitous, abundant (up to 995.0 mg chlorophyll (chl) a m^–2), and productive (up to 110 mg O₂ m^–2 h^–1) components of the reef ecosystem. Concentrations of benthic microalgae, expressed as chlorophyll a per surface area, were approximately 100-fold greater than the integrated water column concentrations of microalgae throughout the region. Benthic microalgal biomass was greater on the shallow water platform reef than in the deeper waters of the cross-shelf transect. In both areas the benthic microalgal communities had a similar composition, dominated by pennate diatoms, dinoflagellates, and cyanobacteria. Benthic microalgal populations were potentially nutrient-limited, based on responses to nitrogen and phosphorus enrichments in short-term (7-day) microcosm experiments. Benthic microalgal productivity, measured by O₂ evolution, indicated productive communities responsive to light and nutrient availability. The benthic microalgal concentrations observed (92–995 mg chl a m^–2) were high relative to other reports, particularly compared with temperate regions. This abundance of productive plants in both reef and shelf sediments in the southern Great Barrier Reef suggests that benthic microalgae are key components of coral reef ecosystems.Communicated by Environmental Editor, B.C. Hatcher     

Some nemerteans (Nemertea) from Queensland and the Great Barrier Reef, Australia

Three species of marine nemerteans described and illustrated from Queensland and the Great Barrier Reef, Australia, include one new genus and two new species: these are the monostiliferous hoplonemerteans Thallasionemertes leucocephala gen. et sp. nov. and Correanemertes polyophthalma sp. nov. A new colour variety of the heteronemertean Micrura callima is also reported, this species previously only being known from Rottnest Island, Western Australia. A key for the field identification of the marine nemerteans recorded from coastal Queensland and the Great Barrier Reef is provided.     

Spatial and temporal variation in predation on reef fishes by coral trout (Plectropomus leopardus,Serranidae)

The diet of coral trout Plectropomus leopardus (Serranidae) was studied over a two year period at One Tree Island, Great Barrier Reef, Australia. Rapid visual counts demonstrated that P. leopardus were most abundant on the reef slope habitat and inner edge of the enclosed lagoon. Few P. leopardus were found at sites from inner lagoon. It was hypothesized that diet would vary among habitats, times and size classes of coral trout. Ninety-two percent of P. leopardus that contained prey had consumed fish and 87% had only eaten fish. Many types of reef fish were taken by P. leopardus (e.g. Pomacentridae, Scaridae, Blenniidae and Labridae). Most pelagic prey (Clupeidae and Engraulididae) were taken on the reef slope, while some prey were solely or pimarily taken in the lagoon (e.g. Blenniidae and crustaceans). Most pelagic prey were taken on the reef slope in summer by P. leopardus>250 mm (SL). Plectropomus leopardus (<200 mm) from the lagoon had a higher proportion of invertebrates in the diet than fish from the reef slope. Plectropomus leopardus of all sizes ate small fish, while largest fish generally consumed largest prey (especially adult scarids and labrids). I argue that interactions among multiple species of prey and predators need more attention, because piscivores may respond to prey in different ways according to habitat type as well as the number and type of other prey types present. Furthermore, different sizes of fish (e.g. coral trout) may impact assemblages of prey in different ways.     

Sensitivity of coral cays to climatic variations,southern Great Barrier Reef,Australia

Analysis of available wind data for the years 1962–80 from Heron Island which is located within the southern Great Barrier Reef indicates that the annual wind energy vector has oscillated within a 45 degree arc from the SSE in the early 1960's to ESE in the late 1970's. Such changes in wind direction influence the direction of propagation of the waves which mould the shape of coral sand cays in this region. Documentation is provided which shows that the variability of the shoreline positions on Erskine Island, an uninhabited vegetated sand cay reflects this change. The implication is that contemporary shoreline erosion on Heron Island is not caused by the development associated with the tourist resort there. It is a symptom of the change in the propagation direction of the wind-induced waves which is related to long-term climatic change.     

Contrasting patterns of genetic structure in two species of the coral trout Plectropomus (Serranidae) from east and west Australia: introgressive hybridisation or ancestral polymorphisms

Inter-specific genetic relationships among regional populations of two species of grouper (Plectropomus maculatus and Plectropomus leopardus) were examined using mitochondrial and nuclear markers. mtDNA revealed contrasting regional inter-specific patterns whilst nuclear markers revealed contrasting patterns among markers, irrespective of region. In eastern Australia (EA) the species form a single mtDNA lineage, but the two species are reciprocally monophyletic in Western Australia (WA). This supports previous evidence for hybridisation between these species on the east coast. WA P. leopardus forms a sister relationship with the EA P. leopardus-maculatus clade while WA P. maculatus is more basal and sister to the P. leopardus lineages, indicating mtDNA does not suffer from incomplete lineage sorting for these species. In contrast, one of three nuclear markers (locus 7-90TG) differentiated the species into two reciprocally monophyletic clades, with no evidence of hybridisation or ancestral polymorphism. The remaining two nuclear markers (2-22 and ETS-2) did not separate these two species, while distinguishing other plectropomid species, suggesting incomplete lineage sorting at these nuclear loci. These results together with coalescence analyses suggest that P. leopardus females have hybridised historically with P. maculatus males and that P. maculatus mitochondria were displaced through introgressive hybridisation and fixation in the P. maculatus founder population on the Great Barrier Reef. The contrasting regional patterns of mtDNA structure may be attributed to Quaternary sea-level changes and shelf width differences driving different reef configurations on each coast. These reef configurations have provided opportunities for local scale interaction and reproduction among species on the narrower EA continental shelves, but not on the broader WA continental shelves.     

Hemiuridae (Digenea) from marine fishes of the Great Barrier Reef,Queensland, Australia

The following species are described, figured and/or recorded from the Great Barrier Reef at Heron Island or Lizard Island, Queensland, with comparative material reported from other areas of the ocean around Australia or New Guinea: Dinurus longisinus (new synonym: D. hippuri) from Seriola lalandi, Heron Island and Coryphaena hippurus, Papua New Guinea; Ectenurus trachuri from Caranx sexfasciatus, Diploprion bifasciatus, Pterocaesio marri, Seriola lalandi and Atherinomorus capricorniensis, Heron Island; Erilepturus hamati (with 25 new synonyms) from Lutjanus carponotatus, Lizard Island, Platycephalus bassensis, Coff's Harbour, NSW, P. fuscus, Coff's Harbour, NSW and Moreton Bay, Queensland, P. endrachtensis, Sillago analis, S. maculata, S. ciliata, Pseudorhombus arsius and Polydactylus sp. from Moreton Bay, Queensland and Lates calcarifer, Darwin, Northern Territory; Tubulovesicula angusticauda from Echeneis naucrates and Lethrinus miniatus, Heron Island and Anguilla reinhardtii, Moreton Bay and Bribie Island, Queensland; Elytrophalloides humerus from Trachinotus botla and T. coppingeri, Heron Island; Lecithochirium kawakawa from Euthynnus affinis Heron Island and Lizard Island: Lecithochirium cirrhiti (new synonyms: L. sammarae, L. nohu) from Sargocentron rubrum, Heron Island; Lecithochirium caesionis from Pterocaesio marri, heron Island; Plerurus digitatus (new synonyms: P. cynoglossi, P. atulis, P. scomberomori) from Plectropomus leopardus, Heron Island, Lutjanus erythropterus, Variola louti, Scomberomorus semifasciatus, Grammatorcynus bicarinatus and Carangoides embureyi, C. gymnostethoides, Lizard Island, Scomberomorus commerson, Heron Island, Lizard Island, New Britain, Papua New Guinea, Point Lookout, Queensland and Moreton Bay, Queensland, Euthynnus affinis Heron Island, Lizard Island and New Britain, Papua New Guinea, Sphyraena barracuda, Heron Island and Lizard Island, Scomberomorus munroi, S. queenslandicus and Saurida undosquamis, Moreton Bay, Queensland and Chirocentrus dorab, Bundaberg, Queensland. The Lecithochirium species-group Cirrhiti is considered indistiguishable from the species-group Lotellae.     

Spatiotemporal patterns of coral disease prevalence on Heron Island,Great Barrier Reef,Australia

Despite increasing research effort on coral diseases, little is known about factors driving disease dynamics on the Great Barrier Reef (GBR). This is the first study to investigate the temporal patterns of coral disease prevalence and potential drivers of disease around Heron Island, in the southern Capricorn Bunker sector of the GBR. Surveys were conducted in two austral summers and three winters between November 2007 and August 2009 on six sites around the island. Six diseases were detected: brown band syndrome (BrB), growth anomalies (GA), ulcerative white spots (UWS), white syndrome (WS), skeletal eroding band disease (SEB) and black band disease (BBD). The lowest overall mean disease prevalence was 1.87 ± 0.75% (mean ± SE) in November 2007 and the highest 4.22 ± 1.72% in August 2008. There was evidence of seasonality for two diseases: BrB and UWS. This is the first study to report a higher prevalence of BrB in the winter. BrB had a prevalence of 3.29 ± 0.58% in August 2008 and 1.53 ± 0.28% in August 2009, while UWS was the most common syndrome in the summer with a prevalence of 1.12 ± 0.31% in November 2007 and 2.67 ± 0.52% prevalence in January 2008. The prevalence of GAs and SEB did not depend on the season, although the prevalence of GAs increased throughout the study period. WS had a slightly higher prevalence in the summer, but its overall prevalence was low (<0.5%). Sites with high abundance of staghorn Acropora and Montipora were characterised by the highest disease prevalence (12% of Acropora and 3.3% of Montipora species were diseased respectively). These results highlight the correlations between coral disease prevalence, seasonally varying environmental parameters and coral community composition. Given that diseases are likely to reduce the resilience of corals, seasonal patterns in disease prevalence deserve further research.