广东省烟草花叶病病原病毒的鉴定

烟草花叶病是广东省产烟区的主要病害之一。我们在南雄等八个县进行调查,1983年至1984年的一般发病率为2～20％。根据血清学反应、病毒粒体形态、鉴别寄主反应及寄主范围、媒介昆虫种类、物理性质、交互保护反应等各项检验结果,鉴定广东省烟草花叶病病原是:三个黄瓜花叶病毒可能株系(普通株系CMV-C,烟草坏死株系CMV-TN,烟草黄色坏死株系(CMV-TYN),烟草花叶病毒(TMV),马铃薯病毒Y(PVY),烟草脉带花叶病毒(TVBMV)和烟草褪绿斑驳病毒(TCMV)(暂定)。     

菊花5种病毒及类病毒多重RT-PCR检测方法的建立

菊花是世界最重要的园艺作物之一,兼具有茶用、药用、食用及观赏等多种经济价值。我国是栽培菊花的起源地,也是主要种植生产区。病毒病害是菊花生产过程中最主要病害,目前已知的菊花病毒及类病毒有20多种,对菊花产业危害巨大。建立快速、高效的检测方法是病害防控的必要条件。前期调查显示番茄斑萎病毒（Tomato spotted wilt orthotospovirus,TSWV）、番茄不孕病毒（Tomato aspermy virus,TAV）、菊花B病毒（Chrysanthemum virus B,CVB）、菊花矮化类病毒（Chrysanthemum stunt viroid,CSVd）和菊花褪绿斑驳类病毒（Chrysanthemum chlorotic mottle viroid,CChMVd）是北京地区菊花中主要病毒及类病毒种类。自NCBI数据库下载以上病毒/类病毒的基因序列,利用不同病毒保守区域,设计开发出特异性引物,建立了5种病毒/类病毒同时检测的多重RT-PCR体系;并对反应体系中引物对的含量配比、退火温度、模板含量等因子进行了优化。试验结果显示,TSWV、TAV、CVB、CChMVd、...     

五种主要上呼吸道病毒多重RT-PCR 检测方法的建立

目的:建立甲型、乙型流感病毒、呼吸道合胞病毒A型、B型(RSV-A、RSV-B)和腺病毒(ADV)五种主要上呼吸道病毒的多重RT-PCR检测方法。方法:利用Primer premier5.0分别针对甲型流感病毒的M基因、乙型流感病毒的PB1基因、RSV-A和RSV-B的F基因及ADV的hexon基因设计五对特异性引物,对Mg2+、dNTP、引物浓度及退火温度等进行优化,建立同时检测甲型、乙型流感病毒、RSV-A、RSV-B和ADV的多重RT-PCR方法,并验证该检测方法的灵敏性。结果:所建立的五种病毒的多重RT-PCR方法可以同时或者分别扩增甲型、乙型流感病毒、RSV-A、RSV-B及ADV的141bp、635bp、525bp、377b和283bp基因片段,敏感度分别达到770PFU/ml、800PFU/ml、680PFU/ml、970PFU/ml和850PFU/ml,且五种病毒间无交叉反应。结论:所建立的多重RT-PCR方法可以迅速准确地检测甲型、乙型流感病毒、RSV-A、RSV-B和ADV,为五种病毒的检测提供了一种方便易行的方法。     

肠道病毒、乙脑病毒和腮腺炎病毒多重RT-PCR检测方法的建立

为建立针对肠道病毒(enterovirus,EV)、乙脑病毒(Japanese encephalitis virus,JEV)和腮腺炎病毒(mumps virus,MUV)的多重RT-PCR检测方法,分别选择肠道病毒的5′UTR基因、乙脑病毒的E基因和腮腺炎病毒M基因设计3对引物,建立同时检测肠道病毒、乙脑病毒和腮腺炎病毒的多重RT-PCR方法.以中国地区流行的与脑炎相关的麻疹病毒和风疹病毒cDNA为模板验证该检测方法的特异性,同时以梯度稀释的不同滴度的脊髓灰质炎病毒、乙脑病毒、腮腺炎病毒评估该检测方法的检出限.所建立的3种病毒的多重RT-PCR方法可同时或分别特异扩增肠道病毒、乙脑病毒和腮腺炎病毒的152 bp、429 bp和274 bp基因片段,基因序列分别与脊髓灰质炎病毒Sabin 1型5′UTR基因片段、乙型脑炎病毒SA-14-14-2株E基因片段及腮腺炎病毒S79基因片段序列一致;检出限分别达到78.1 CCID50/mL、312.5 PFU/mL、156.2 CCID50/mL;而对麻疹病毒和风疹病毒的扩增均为阴性.所建立的多重RT-PCR特异性和检出限良好,可用于上述3种脑炎病毒的快速检测.     

马铃薯Y病毒组病毒高产量提取方法的建立

本文报道了高产量提取芜菁花叶病毒（ＴｕＭＶ）、莴苣花叶病毒（ＬＭＶ）、芋花叶病毒（ＤＭＶ）和大豆花叶病毒（ＳＭＶ）的提取方法。本方法通过使用高盐浓度的磷酸盐缓冲液以及在缓冲液中加入氯化镁和脲,并用ＴｒｉｔｏｎＸ－１００作为澄清剂,替代常规使用的氯仿和正丁醇,成功的提取到了大量病毒粒子,上述四种病毒提取的得率分别是ＴｕＭＶ为１７３．３ｍｇ／ｋｇ病叶,ＬＭＶ为９６ｍｇ／ｋｇ病叶,ＳＭＶ为１９９．２ｍｇ／ｋｇ病叶,ＤＭＶ为１７６．６ｍｇ／ｋｇ病叶。     

RT-PCR方法同步检测兰州百合(Lilium davidii var.unicolor)两种主要病毒

建立并优化了以18S rRNA为内参照的特异性检测兰州百合(Lilium davidii var.unicolor)两种主要病毒:黄瓜花叶病毒(Cucumber mosaic virus,CMV)和百合无症病毒(Lily symptomless virus,LSV)的三重RT-PCR体系。结果表明,52.5°C的退火温度、0.025 U/μL的Taq DNA聚合酶、0.6 mmol/L的dNTP浓度、4 mmol/L的Mg2+浓度、0.4μmol/L的各引物浓度以及30个循环等是三重PCR体系扩增的最佳条件;同时用该优化体系检测了兰州百合不同取样部位的病毒差异,发现LSV在不同取样部位的特异扩增条带的强度比较一致,而CMV差距相对较大,外鳞片CMV相对含量在整个感病植株中最高。为兰州百合主要病毒检测、脱毒组培快繁提供了技术支撑。     

表达马铃薯X病毒和Y病毒双价外壳蛋白基因马铃薯植株的抗病性

表达马铃薯Ｘ病毒（ＰＶＸ）和马铃薯Ｘ病毒（ＰＶＹ）双价外壳蛋白（ＣＰ）基因的马铃薯虎头和克新４号,用机械摩擦同时接种ＰＶＸ和ＰＶＹ后,通过症状观察,植株中ＰＶＸ和ＰＶＹ的ＥＬＩＳＡ检测结果表明,转基因头虎头和克新４号的多数株系的平均病毒含量均明显低于未转基因的对照植株,不同时期病毒测定结果表明,许多株系病毒积累缓慢,延迟发病,说明转ＰＶＸ,ＰＶＹ双价ＣＰ基因的马铃薯,对ＰＶＸ和ＰＶＹ复合侵染发生不     

安徽烟草病毒类型及优势种初步研究

1978年,烟草病毒病在安徽烟区流行,导致凤阳县烟叶总产损失92.3％,引起了普遍震惊。1981—1984年作者对来自16个县、市552个病毒材料,经生物测定、血清反应、电镜观察,初步分离出CMV、TMV、PVY和PVX四种病毒。它们分别约占检测总数的82.79％、4.53％、2.54％和0.36％,其中CMV与长期视为优势种的TMV比值为18.3,除此,尚有约占检测总数9.8％的CMV和TMV、CMV和PVY复合侵染,以及不明类型的毒株。通过对田间烟草以及其他植物花叶病株的实际检测,进一步表明:CMV在烟区分布范围极广、出现频次最多,已形成了复杂的循环侵染系统,成为近期内烟草病毒病持续流行危害的首要毒原。     

建立新型的常见腹泻相关病毒的多重检测方法

利用GenomeLab(tm)GeXP遗传分析系统建立一种同时检测A组轮状病毒、诺如病毒GI、GII型、札如病毒、肠道腺病毒、星状病毒、人博卡病毒II型7种常见腹泻相关病毒的方法。对反应条件进行优化后,非同日三次重复实验表明至少在104拷贝/μL水平可同时特异地检测出7种病毒,对Enterovirus71、Human Parechovirus、Picobir-navirusII阳性标本无交叉反应。本研究初步建立了一种高通量、快速的常见腹泻相关病毒的检测方法,为腹泻病原的分子诊断提供了新的方法。     

RT-PCR检测蓝舌病毒技术的建立

蓝舌病毒(Bluetongue Virus,BTV)是呼肠孤病毒科(Reoviridae)环状病毒属(Orbivirus)的代表种,含10个节段的双链RNA(dsRNA)作基因组.其中,L2节段编码BTV型特异性抗原VP2,L3节段和S7节段编码群特异性抗原多肽VP3和VP7.其中,VP7是BTV粒子的主要结构多肽之一,其编码基因序列保守.VP7具有高度的抗原性,能刺激被感机体产生强的群特异性免疫反应[1].     

RT—PCR技术检测呼吸道合胞病毒RNA方法的建立

为了建立一种快速诊断呼吸道合胞病毒（RSV）感染的方法,根据RSVN基因的核苷酸序列,设计合成了一对引物,经RT-PCR扩增,可检出RSVRNA该引物不能检测流感病毒、副流感病毒RNA。应用该法可检出疑为RSV感染的婴幼儿鼻咽分泌物中的病毒RNA且比病毒分离法敏感,特异性与免疫荧光法一致。结果表明RT－PCR法具有快速、敏感、特异的优点,可用于RSV感染患儿的临床诊断。     

Comparison between Culture and a Multiplex Quantitative Real-Time Polymerase Chain Reaction Assay Detecting Ureaplasma urealyticum and U. parvum

A novel multiplex quantitative real-time polymerase chain reaction (qPCR) for simultaneous detection of U. urealyticum and U. parvum was developed and compared with quantitative culture in Shepard''s 10 C medium for ureaplasmas in urethral swabs from 129 men and 66 women, and cervical swabs from 61 women. Using culture as the gold standard, the sensitivity of the qPCR was 96% and 95% for female urethral and cervical swabs, respectively. In male urethral swabs the sensitivity was 89%. The corresponding specificities were 100%, 87% and 99%. The qPCR showed a linear increasing DNA copy number with increasing colour-changing units. Although slightly less sensitive than culture, this multiplex qPCR assay detecting U. urealyticum and U. parvum constitutes a simple and fast alternative to the traditional methods for identification of ureaplasmas and allows simultaneous species differentiation and quantitation in clinical samples. Furthermore, specimens overgrown by other bacteria using the culture method can be evaluated in the qPCR.     

Design and Development of a Multiplex Real-Time PCR Assay for Detection of HIV-1 and HCV Using Molecular Beacons

At least 10 million individuals worldwide are co-infected with immunodeficiency virus type 1 (HIV-1) and hepatitis C virus (HCV). These two viruses are transmitted most primarily by exposure to infected blood or blood products. Various nucleic acid assays have been developed for diagnostics and therapeutic monitoring of infections. In the present study, a multiplex real-time PCR assay for simultaneous detection of HCV and HIV-1 using molecular beacons were designed and validated. A well-conserved region in the HIV-1 pol gene and 5′NCR of HCV genome were used for primers and molecular beacon design. The analysis of scalar concentrations of the samples indicated that this multiplex procedure detects at least 1,000 copies/ml of HIV-1 and 100 copies/ml of HCV with linear reference curve (R ² > 0.94). The results demonstrate that a specificity of 100 % and sensitivity of 96 % can be achieved. The analytical sensitivity study with BLAST software demonstrated that the primers do not attach to any other sequences except for that of HIV-1 or HCV. The primers and molecular beacon probes only detected HIV-1 and all major variants of HCV. This assay may represent an alternative rapid and relatively inexpensive screening method for detection of HIV-1/HCV co-infection especially in blood screening.     

A Method for Mapping Germ Line Sequences in Tetrahymena Thermophila Using the Polymerase Chain Reaction

A method for mapping DNA sequences to specific germinal chromosomes in the ciliated protozoan Tetrahymena thermophila has been developed. This mapping technique (PCR mapping) utilizes the polymerase chain reaction and template DNA derived from nullisomic strains to directly assign micronuclear DNA sequences to specific micronuclear chromosomes. Using this technique, a number of unique sequences and short repetitive sequences flanked by unique sequences have been mapped to four of the five germinal chromosomes.     

A Species-Specific Polymerase Chain Reaction Assay for Rapid and Sensitive Detection of <Emphasis Type="Italic">Colletotrichum</Emphasis><Emphasis Type="Italic">capsici</Emphasis>

Colletotrichum capsici is an important fungal species that causes anthracnose in many genera of plants causing severe economic losses worldwide. A primer set was designed based on the sequences of the ribosomal internal transcribed spacer (ITS1 and ITS2) regions for use in a conventional PCR assay. The primer set (CcapF/CcapR) amplified a single product of 394 bp with DNA extracted from 20 Mexican isolates of C. capsici. The specificity of primers was confirmed by the absence of amplified product with DNA of four other Colletotrichum species and eleven different fungal genera. This primer set is capable of amplifying only C. capsici from different contaminated tissues or fungal structures, thereby facilitating rapid diagnoses as there is no need to isolate and cultivate the fungus in order to identify it. The sensitivity of detection with this PCR method was 10 pg of genomic DNA from the pathogen. This is the first report of a C. capsici-specific primer set. It allows rapid pathogen detection and provides growers with a powerful tool for a rational selection of fungicides to control anthracnose in different crops and in the post-harvest stage.