Cellulose-decomposing fungi of desert soils in Saudi Arabia

Seventy-five species in addition to 5 varieties of cellulose-decomposing which belong to 27 genera were collected during this investigation. Aspergillus (12 species + 4 varieties), Alternaria (4 species), Stachybotrys (3 species + 1 variety), and Penicillium (12 species) were of high frequency of occurrence, of which A. fumigatus, A. niger, A. terreus, A. alternata, A. tenuissima, S. atra, P. citrinum and P. corylophilum were the most common. Six genera were of moderate frequency and these were Botryotrichum (2 species), Macrophomina (1 species), Drechslera (5 species), Ulocladium (4 species), Chaetomium (7 species) and Curvularia (4 species) of which B. atrogriseum, D. spicifera, D. sativus, Ubotrytis, C. spirale and C. lunata were the most prevalent. Five and twelve genera were recovered on cellulose-Czapek's agar plates in low and rare frequency of occurrence, respectively.     

Assessment of Water Pollution using Diatom Community Structure and Species Distribution — A Case Study in a Tropical River Basin

A study on biological assessment of water pollution using diatom community structure and species distribution was carried out in the Linggi River Basin, Malaysia which was polluted by various urban, industrial and agricultural wastes. A total of 86 diatom taxa belonging to 21 genera were recorded from all eight sampling stations located in the basin, of which 70 species were found on artificial substrates; the remaining 16 species were recorded exclusively on natural substrates. The number of diatom species observed between the stations varied from 22-47 species. The dominant diatom species in decreasing order of abundance were Eunotia vanheurckii, Nitzschia palea, Achnanthes saxonica, Gomphonema parvulum and Achnanthes minutissima. The most common clean water species were Achnanthes minutissima, A. linearis and Synedra rumpens. The most tolerant species were Nitzschia palea followed by Gomphonema parvulum and Pinnularia braunii. Eunotia vanheurckii and Navicula cryptocephala occurred in high densities at both unpolluted and polluted stations and can be considered as the common facultative or indifferent species. Although a large number of species were recorded at the unpolluted stations, equivalent number of species were also found at the moderately polluted stations. However, the number of species was reduced at grossly polluted stations. Nevertheless, a marked variation in species association exists between the unpolluted and polluted stations, but not among the polluted stations to distinguish the type and degree of pollution.     

板蓝根田节肢动物群落的结构与多样性研究

为了解河南省板蓝根田节肢动物群落的结构组成及物种多样性,该研究采用5点随机取样,通过网捕法和目测法调查并记录了板蓝根植株及地面上的节肢动物种类和数量。结果表明:河南省板蓝根田节肢动物群落物种丰富,共采集到2 613头,隶属于2纲10目39科61种。其中,植食性种类和捕食性种类均为24种(各占39.34%),寄生性种类4种(占6.56%),中性种类9种(占14.75%)。蜘蛛的种类占群落总种数的比例最高(为21.31%),表明田间的蜘蛛种类最丰富。鳞翅目物种的个体数量远大于其他的目,占群落个体数的43.78%。菜青虫和小菜蛾的相对丰盛度最高,分别为0.184 8和0.162 6,说明二者是河南省板蓝根田的优势害虫。捕食性集团的均匀度指数最高,寄生性集团的优势度指数最高,其中小菜蛾幼虫的寄生性天敌菜蛾盘绒茧蜂的数量最大。     

Studies on mycoflora of salt marshes in Egypt. IV=osmophilic fungi

Ninety-five species and seven varieties which belong to thirty-nine genera were isolated from 74 soil samples from salt marshes. At 28°C, on 30% sucrose Czapek's agar, ninety species and four varieties which belong to thirty-six genera were encountered, from which A. niger, A. fumigatus A. terreus and P. notatum were the most frequent. On 60% sucrose Czapek's agar, sixty-three species and three varieties were recovered which belong to twenty-five genera, from which A. niger, A. fumigatus, Cladosporium herbarum and A. terreus were the most frequent.At 45°C, on 30% sucrose, sixteen species and four varieties were identified, but on 60% sucrose, fourteen species and three varieties were isolated. A. fumigatus and A. niger were the most frequent on both sucrose concentrations.The results reveal that the soil samples poor in total osmophilic fungi (at 28°C) were significantly higher in their content of total soluble salts, Na and K and significantly lower in the average number of species per soil samples than the rich ones; the difference was nonsignificant in case of organic matter.     

Lactobacillus and Pediococcus species richness and relative abundance in the vagina of rhesus monkeys (Macaca mulatta)

Background The rhesus monkey is an important animal model to study human vaginal health to which lactic acid bacteria play a significant role. However, the vaginal lactic acid bacterial species richness and relative abundance in rhesus monkeys is largely unknown. Methods Vaginal swab samples were aseptically obtained from 200 reproductive‐aged female rhesus monkeys. Following Rogosa agar plating, single bacterial colonies representing different morphotypes were isolated and analyzed for whole‐cell protein profile, species‐specific polymerase chain reaction, and 16S rRNA gene sequence. Results A total of 510 Lactobacillus strains of 17 species and one Pediococcus acidilactici were identified. The most abundant species was Lactobacillus reuteri, which colonized the vaginas of 86% monkeys. Lactobacillus johnsonii was the second most abundant species, which colonized 36% of monkeys. The majority of monkeys were colonized by multiple Lactobacillus species. Conclusions The vaginas of rhesus monkeys are frequently colonized by multiple Lactobacillus species, dominated by L. reuteri.     

Lichens of St Helena and Ascension Island

Lichens are the dominant organisms on most of the South Atlantic island of St Helena. In total, 220 different species were found during a recent survey, most of which have never been reported from the island. Previously, less than 50 lichen species were reported from the island, one half of which are most probably incorrect records. The total number of lichens known from the island now stands at 225. Most species could be identified, but the following, most probably endemic, species are described as new to science: Dolichocarpus seawardii , which is only the second species in this genus, the type being from Chile; Dermatiscum pusillum , which is only the third species in this African genus; Dimelaena triseptata ; Xanthoparmelia beccae ; and four Ramalina species, Ramalina geniculatella , R. ketner‐oostrae , R. rigidella , and R. sanctae‐helenae . The lichen flora has many species in common with that of the geologically much younger Ascension Island, where just under 100 species were recently found by the author, most of which are equally new to that island. Lecanora sanctae‐helenae, previously known as the only endemic lichen of St Helena, was also found to be abundant on Ascension Island. © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society, 2008, 158 , 147–171.     

Observations of mixed-species bird flocks at Kichwa Tembo Camp,Kenya

Mixed-species foraging flocks were studied at Kichwa Tembo Camp on the edge of the Masai Mara National Reserve in Kenya between July and September 2004. Observations were made on 29 mixed-species flocks, in which 24 species participated. African Paradise-Flycatcher Terpsiphone viridis, Black-backed Puffback Dryoscopus cubla, Grey-backed Camaroptera Camaroptera brachyura, Collared Sunbird Hedydipna collars and Cabanis's Greenbul Phyllastrephus cabanisi were the most common participants in mixed-species flocks, as well as among the most frequently encountered bird species overall. The Black-backed Puffback was identified as the nuclear species in flocks due to their abundance and frequency with which they were followed by other species. Mixed-species flocks represent another niche dimension in this diverse bird community, but few of these species could be described as flock specialists; most of the birds observed in mixed-species flocks in this study were opportunistic attendant species, including the African Pygmy-Kingfisher Ispidina picta, not previously described as joining mixed-species flocks.     

The Genus Leptotheca (Protozoa: Myxosporida) in Macrourid fishes and Sablefish,Anoplopoma fimbria*

SYNOPSIS. Five species of Leptotheca, one new, were found in the macrourid fishes and the sablefish, Anoplopoma fimbria. Those species which were geographically widespread in numerous host species showed little variation. Two Leptotheca species were found both in the gall bladder and urinary bladder/kidney.     

广西景天科景天属植物小志

该文基于文献考证、馆藏标本鉴定及野外调查，对广西景天属(Sedum L.)植物进行了系统的梳理，对景天属植物物种多样性进行概述，确定目前分布有17种，其中有6个新记录种。该文概述了广西景天属植物物种多样性，订正了藓状景天(S.polytrichoides Hemsl.),简述了6个新记录种，即钝萼景天(S.leblancae Hamet.)、黎平景天(S.lipingense R. B. Zhang, D. Tan&R. X. Wei)、龙泉景天(S.lungtsuanense S. H. Fu)、圆叶景天(S.makinoi Maxim.)、细小景天(S.subtile Miq.)、土佐景天(S.tosaense Makino),并提供其形态特征集要与彩色照片。该文还对广西景天属植物的多样性以及资源潜在利用价值等进行了讨论，并附有分种检索表和各个分类群在广西的分布情况，为该属后续的研究与利用提供了本底资料。     

Rhizosphere and rhizoplane fungi of Triticum vulgare cultivated in Saudi Arabia

131 species in addition to 7 varieties which belong to 40 genera were collected from the rhizosphere (36 genera and 120 species + 7 varieties) and rhizoplane (27 genera and 56 species + 2 varieties) of Triticum vulgare. More than 22 species and 3 varieties were not encountered previously from soils or other sources in Saudi Arabia.In the rhizosphere, Aspergillus and Penicillium contributed the broadest spectrum of species (26 species + 5 varieties; and 24 species, respectively). The most frequent fungi were Aspergillus niger, A. clavatus, A. flavus, A. terreus, A. carneus, Penicillium citrinum, P. notatum, P. chrysogenum and Fusarium solani. In the rhizoplane which is a more selective substratum for fungi than the rhizosphere, the picture of dominance became different and the most common fungi were Fusarium solani, F. oxysporum, F. moniliforme, Drechslera spicifera, Cephalosporium roseo-griseum, Stemphylium botryosum, Acremonium strictum and Rhizoctonia solani.     

Systematics of the genusCandida Berkhout: Proton magnetic resonance spectra of the mannans and mannose-containing polysaccharides as an aid in classification

The proton magnetic resonance (p.m.r.) spectra of the mannans, galactomannans and mannose-containing heteropolysaccharides of a number of species ofCandida were determined, and compared with the spectra of similar polysaccharides of some species of the sporogenous generaPichia, Hansenula, Endomycopsis, Debaryomyces andSaccharomyces. Similarities among the spectra were used as an aid in classification. TheCandida species studied were placed in four groups: 1) thoseCandida species classified as asporogenous forms of perfect species, 2) those which produce mannose-containing polysaccharides having p.m.r. spectra resembling those of the mannans of known perfect species, 3) members of theCandida parapsilosis group, 4) thoseCandida species which did not ferment glucose and which were not included in one of the other groups.Issued as N.R.C. No. 10566.The authors are grateful to all those who made the work possible by supplying the cultures and materials studied. They wish also to thank Mr. M. Mazurek for the determination of the p.m.r. spectra, and Mr. N. R. Gardner and Mr. R. J. Magus for valuable technical assistance.     

Reverse ascertainment bias in microsatellite allelic diversity in owls (Aves, Strigiformes)

A rich source of markers may be overlooked by screening for polymorphism in the source species only. We screened 129 microsatellite loci isolated from the powerful owl (Ninox strenua) against two closely related species; Ninox connivens and Ninox novaeseelandiae. From the screening effort 20 polymorphic markers were isolated, including six loci which were originally discarded as they were monomorphic in the source species. Further cross-species amplification of all 20 loci across species from two families, Strigidae and Tytonidae, revealed unusually high levels of polymorphism within closely related species, and limited success within phylogenetically distant species. Routine screening of multiple species during the marker development phase can yield a wider range of polymorphic markers which can subsequently enhance cross-species amplification attempts.     

Comparison of genetic variability in remnant and wide-spread rainforest understorey species of Austromyrtus (Myrtaceae)

This study investigated the genetic variability, stand structure, and reproductive activity of four species of Austromyrtus which showed differing levels of rarity and patterns of distribution. The focus of the study was A. gonoclada which is extremely rare due to extensive urban expansion in Brisbane, Australia. The total number of known individuals in the species is only 27. Because nothing was known about the genetic structure of Austromyrtus comparison with other species was made to provide a context for studies on A. gonoclada. Population structure and levels of reproductive activity were not correlated to species rarity or distribution. A. gonoclada showed maximum genetic variability in comparison to the other species of Austromyrtus, despite the small population size. Three of six variable loci were in Hardy-Weinberg equilibrium in A. gonoclada populations, in contrast to populations of the other species which had few heterozygous genotypes. The higher variability of the remaining individuals is suggested to be a legacy of the relatively short time since they were part of a larger population. There were very few seedlings of A. gonoclada, in contrast to the other species of Austromyrtus and the seeds produced fell from the tree while still green and were unable to be germinated. A. gonoclada is under continuing threat from development and has low reproductive success. Active programmes for recovery of this species will be necessary as its continued survival is dependent on population increase. Management of the genetic resources of the species will enable survival with long-term evolutionary potential.     

DNA barcoding of genus Toxoptera Koch (Hemiptera: Aphididae): Identification and molecular phylogeny inferred from mitochondrial COI sequences

Abstract Identification of aphid species is always difficult due to the shortage of easily distinguishable morphological characters. Aphid genus Toxoptera consists of species with similar morphology and similar to Aphis in most morphological characters except the stridulatory apparatus. DNA barcodes with 1 145 bp sequences of partial mitochondrial cytochrome‐coxidase I (COI) genes were used for accurate identification of Toxoptera. Results indicated mean intraspecific sequence divergences were 1.33%, whereas mean interspecific divergences were greater at 8.29% (0.13% and 7.79% if T. aurantii 3 and T. aurantii 4 are cryptic species). Sixteen samples were distinguished to four species correctly by COI barcodes, which implied that DNA barcoding was successful in discrimination of aphid species with similar morphology. Phylogenetic relationships among species of this genus were tested based on this portion of COI sequences. Four species of Toxoptera assembled a clade with low support in maximum‐parsimony (MP) analysis, maximum‐likelihood (ML) analysis and Bayesian phylogenetic trees, the genus Toxoptera was not monophyletic, and there were two sister groups, such as T. citricidus and T. victoriae, and two clades of T. aurantii which probably presented cryptic species in the genus.     

Resource-niche complementarity and autotrophic compensation determines ecosystem-level responses to increased cladoceran species richness

This study examines the relationship between cladoceran species richness and ecosystem functioning. I conducted an experiment in which four cladocerans, Daphnia. magna, D. longispina, D. pulex and Chydorus sphaericus, were cultured in microcosms using different species combinations and levels of species richness. The results demonstrate that even within this closely related group of organisms the effects on ecosystem-level variables, such as total algae and zooplankton biomass, per capita productivity, and nutrient concentrations, as well as phytoplankton community structure, were highly variable between different combinations of these species. Since only four species where involved in this study, species-specific effects dominated the general relationship between species richness and ecosystem functioning. Particular combinations of species resulted in effects that indicated more efficient grazing. These effects, which were most pronounced in combinations including both D. magna and C. sphaericus, were manifested as an indirect effect as the prey community shifted towards grazing-resistant species. As a result, the productivity of the prey community decreased, because phytoplankton species with lower per capita productivity became more dominant. I suggest that the primary mechanism that caused this significant effect was complementarity in prey-size use of D. magna and C. sphaericus. In terms of prey-size range, D. pulex and D. longispina were redundant when D. magna was present and were quickly out-competed by the latter despite higher per capita filtering efficiency. The results show that different mechanisms are important for different combinations of species. Furthermore, the ability of the prey community to respond to changes of consumer species composition is an important factor in experiments in which consumer species richness is experimentally manipulated. Received: 2 November 1998 / Accepted: 8 September 1999     

六种沉香属植物叶片解剖结构研究

为比较沉香属不同种植物间的叶片形态解剖特征,将不同来源的六种沉香属植物在海南省兴隆南药园种植,运用石蜡切片法和撕片法对其成熟叶片的解剖特征进行观察,并对叶片的上下表皮,叶脉和叶横切面等12项数量性状进行统计分析。结果表明:六种沉香属植物叶片解剖结构基本一致,均为典型的异面叶,由表皮、叶肉和叶脉组成,表现出典型的旱生形态特点。表皮细胞单层,气孔微下陷,仅分布在下表皮,上下表皮上零星分布着表皮毛。叶肉组织发达,栅栏组织由1~2层排列紧密地圆柱状细胞组成,其间分布着大量的长方晶体,海绵组织内有一层排列较整齐,染色较深的异细胞组成的下皮层。主脉维管束双韧型,呈圆环状,内含大量异细胞。方差分析表明,除栅海比外,叶片厚度、叶脉条数、主脉厚度等其余11项数量指标在六种植物间差异均达到显著水平。聚类分析将这六种植物聚成3类,Aquilaria sinensis(白木香),A.crassna和A.banaensis聚为一类,A.baillonii和A.malaccensis聚为一类;A.yunnanensis(云南沉香)单独为一类。该研究结果为沉香属植物的物种鉴定提供了解剖学依据,同时对沉香属植物合理开发利用具有重要意义。     

The distribution of Oligochaeta on an exposed rocky shore in southeast Ireland

The distribution of oligochaetes was studied on a wave-exposed, granite shore at Carnsore Point, County Wexford. Habitats sampled were crevices and shallow surface cracks in rock, Lichina pygmaea turf, a Mytilus edulis bed, barnacles, Laurencia pennatifida turf, Corallina officinalis turf and pools. Lichina, mussels, barnacles greater than 8 mm in height, Laurencia and Corallina were sampled quantitatively.Three species of Tubificidae and nine species of Enchytraeidae were recorded including two new species described from this locality and five which are undescribed. Oligochaetes were present in all the habitats sampled but were rare in pools and numbers were low on barnacle-covered rock except where barnacles were more than 8 mm in height. The number of species increased with decreasing tide level and was highest in lower shore crevices. Highest densities were recorded from Corallina turf and in barnacles > 8 mm. Lumbricillus semifuscus was the most widespread species, occurring in crevices and mats at all tide levels; other species had more restricted distributions. Grania species were confined to Corallina turf. Only three species of oligochaete were recorded from cracks where they were almost the only fauna present. Species diversity and density were influenced by physical structure of the habitat, particularly the amount of retained sediment.The oligochaetes are members of a rich cryptofauna in habitats which provide them with organic matter and moisture and protect them from environmental extremes and wave damage and from predators during immersion. Reasons for the scarcity of oligochaete records from exposed rocky shores and the high proportion of new species in this study are discussed.     

Cladistic analysis of morphological characters in the eulophine tribe Cirrospilini (Hymenoptera: Eulophidae)

A total of 56 morphological characters were analyzed for 53 cirrospiline species that represent all of the 17 described genera of the tribe. The other taxa of the Eulophinae included in the analysis were six species of six representative genera in the tribe Eulophini, a species of Elasmus (the only genus comprising the tribe Elasmini), and a species of Trichospilus (unplaced). Trichospilus and two of the six genera of Eulophini examined were placed within Cirrospilini. Monophyly of Cirrospilini (when these two genera of Eulophini and Trichospilus are included) and of the cirrospiline genera for which more than one species were examined was supported, but the relationships between the genera were poorly resolved. An exception was Cirrospilus, the largest genus in the Cirrospilini, monophyly of which was not supported to any extent.     

Fly pollination and duodichogamy in Bridelia stipularis and Cleistanthus sumatranus (Phyllanthaceae)

The globally distributed family Phyllanthaceae comprises 1745 species, all of which produce unisexual flowers, and most of the species occur in the tropics. The few species in which the pollination system has been studied are pollinated by flies, wasps, or specialized moths, and at least two species are duodichogamous. Here we report on the flowering phenology and pollination of the Chinese species Bridelia stipularis and Cleistanthus sumatranus, which were studied on the tropical Hainan Island. Both species are duodichogamous and indicated to be fly‐pollinated. The calliphorid species Chrysomya megacephala, Isomyia isomyia, Pierretia sp., Hemipyrellia sp., and Achoetandrus tufifacies were the most frequent flower visitors to B. stipularis; some of these species together with syrphids (Meliscaeva cinctella, Dideopsis sp., and Eristalis sp.) were the most abundant visitors to Cl. sumatranus flowers. Fruit set in hand‐pollinated flowers was higher than in open‐pollinated flowers, but because of natural fruit abortion the difference was not significant, indicating that fly pollinators do not limit reproduction of these Phyllanthaceae species. This study provides an addition to the limited Asian literature on pollination by flies and the even more limited literature on duodichogamy. It could help to broaden our understanding for analysis of the evolution of duodichogamy in future research, but the specific ecological factors behind the evolution of this rare sexual system are still difficult to generalize.