Studies on Degradation of d-Biotin by Microorganisms

During the course of our investigations on the metabolism of d-biotin by microorganism, it has been found that some strains of fungi belonging to the genera Rhodotorula, Penicillium and Endomycopsis, are able to degrade d-biotin oxidatively into various biotin vitamers. The present work was undertaken to characterize these vitamers. The vitamers formed were separated by the ion exchange column chromatography, into Fraction A (d-biotin sulfoxide), Fraction B (unknown vitamer II), Fraction C (d-biotin) and Fraction D (unknown vitamer I). Rf values of vitamer I and vitamer II were found to be different from those of the known biotin vitamers. The vitamers I and II did not support the growth of Lactobacillus arabinosus and Saccharomyces cerevisiae, but did support that of Bacillus subtilis. This degradation reaction occurred rather favorably in high aerobic condition.     

Studies on Degradation of d-Biotin by Microorganisms

During the course of investigations on the metabolism of d-biotin by microorganisms, the authors have found that a strain belonging to Endomycopsis effectively converted d-biotin into unknown biotin vitamers. The unknown biotin vitamers formed were isolated in crystalline form from the culture filtrate of a strain of Endomycopsis species and characterized as bisnorbiotin and bisnorbiotin sulfoxide by their physico-chemical and biological properties. The isolated vitamers were shown to support the growth of Bacillus subtilis, but not of Saccharomyces cerevisiae and of Lactobacillus arabinosus. The degradative pathway of d-biotin in microorganisms was also discussed.     

Phosphonates and Their Degradation by Microorganisms

Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C–P) bond. Wide occurrence of phosphonates among xenobiotics polluting the environment has aroused interest in pathways and mechanisms of their biodegradation. Only procaryotic microorganisms and the lower eucaryotes are capable of phosphonate biodegradation via several pathways. Destruction of the non activated C–P bond by the C–P lyase pathway is of fundamental importance, and understanding of the process is a basic problem of biochemistry and physiology of microorganisms. This review offers analysis of available data on phosphonate degrading microorganisms, degradation pathways, and genetic and physiological regulation of this process.     

Diversity of the Degradation of Panthenol by Microorganisms

Several microorganisms isolated from soil were found to grow in the medium containing panthenol. The results of the investigation of the degradative metabolism of this compound demonstrated that there are two different inducible pathways.

Strain 1041 produced 3-aminopropanol and β-alanine when grown with panthenol. 3-Aminopropanol plus pantoate, as well as panthenol, supported the growth of induced culture. Both washed cells and cell extract of the organism also produced 3-aminopropanol, which was then oxidized to β-alanine. No oxidation of panthenol to pantothenic acid was observed. Isolation and identification of the products were performed. These results led to the conclusion that panthenol is hydrolyzed to pantoic acid and 3-aminopropanol as the first step, which is then followed by oxidation to β-alanine.

Strain 1091 produced pantothenic acid, but not 3-aminopropanol, from panthenol. 3-Aminopropanol plus pantoate did not support the growth of the induced culture. No degradation of 3-aminopropanol was observed. Isolation and identification of pantothenic acid and a 3-methyl-2-benzothiazolone hydrazone derivative of the aldehyde form panthenol were performed. From the results, it was confirmed that panthenol is first oxidized to pantothenic acid, which is then hydrolyzed to β-alanine and pantoic acid.

Panthenol was also oxidized to pantothenic acid by Bacillus roseus AKU 0208. The enzyme was not induced in the presence of panthenol.     

Anaerobic Phenol Degradation by Microorganisms of Swine Manure

Swine manure contains diverse groups of aerobic and anaerobic bacteria. An anaerobic bacterial consortium containing sulfate-reducing bacteria (SRB) and acetate-utilizing methanogenic bacteria was isolated from swine manure. This consortium used phenol as its sole source of carbon and converted it to methane and CO₂. The sulfate-reducing bacterial members of the consortium are the incomplete oxidizers, unable to carry out the terminal oxidation of organic substrates, leaving acetic acid as the end product. The methanogenic bacteria of the consortium converted the acetic acid to methane. When a methanogen inhibitor was used in the culture medium, phenol was converted to acetic acid by the SRB, but the acetic acid did not undergo further metabolism. On the other hand, when the growth of SRB in the consortium was suppressed with a specific SRB inhibitor, namely, molybdenum tetroxide, the phenol was not degraded. Thus, the metabolic activities of both the sulfate-reducing bacteria and the methanogenic bacteria were essential for complete degradation of phenol. Received: 31 January 1997 / Accepted: 7 March 1997     

Biochemical and Molecular Basis of Pesticide Degradation by Microorganisms

Abstract

Fungal arachidonic acid (ARA)-rich oil is an important microbial oil that affects diverse physiological processes that impact normal health and chronic disease. In this article, the historic developments and technological achievements in fungal ARA-rich oil production in the past several years are reviewed. The biochemistry of ARA, ARA-rich oil synthesis and the accumulation mechanism are first introduced. Subsequently, the fermentation and downstream technologies are summarized. Furthermore, progress in the industrial production of ARA-rich oil is discussed. Finally, guidelines for future studies of fungal ARA-rich oil production are proposed in light of the current progress, challenges and trends in the field.     

Formation and Degradation of Styrene Oxide Stereoisomers by Different Microorganisms

The formation of optically pure styrene oxides by oxidation of styrene and the isomerisation of styrene oxide to phenylacetaldehyde was investigated with different microorganisms.     

Degradation of Organic Complexing Agents by Halophilic Microorganisms in Brines

The potential use of geologic salt beds as terminal repositories for nuclear waste has necessitated research on the interaction of the waste with indigenous microbiota. Microorganisms may affect actinide solubility by degrading organic complexing agents present in the waste. A halophilic bacterium and Archaea indigenous to a salt formation in New Mexico were examined for their ability to degrade acetate, oxalate, citrate, and ethylenediamine tetraacetate under aerobic conditions in low and high-magnesium brines. All complexing agents, except EDTA, were utilized, suggesting that microorganisms indigenous to such repositories can potentially play a beneficial role in mitigating actinide mobility.     

筛选微生物降解木质纤维素的研究进展

木质纤维素资源是自然界中含量丰富的可再生资源,利用微生物降解木质纤维素是一种重要的策略。在综合国内外对木质纤维素降解微生物的筛选方法和研究策略的基础上,从单一菌株、复合微生物菌系和组学技术三个方面对筛选微生物降解木质纤维素进行了总结和分析,阐述了各个策略的优势特点和应用价值,即单一菌株易于培养但降解能力较低,复合菌系降解能力强但传代稳定性较差,组学技术能够更好的解释微生物降解木质纤维素的机理,为筛选木质纤维素降解微生物提供一定的指导。同时提出使用合成生物学的策略进行相应微生物的筛选,旨在为筛选高效降解木质纤维素的微生物提供一定的参考。     

Degradation of Endrin, Aldrin, and DDT by Soil Microorganisms

Twenty microbial cultures which had been shown to degrade dieldrin were tested to determine their ability to degrade endrin, aldrin, DDT, gamma isomers of benzenehexachloride (gamma-BHC), and Baygon. All isolates were able to degrade DDT and endrin, whereas 13 degraded aldrin. However, none of them was able to degrade Baygon or gamma-BHC.     

外源微生物及辅料对秸秆降解效果的影响

研究加入外源微生物及添加辅料对秸秆降解率的影响。通过秸杆固体培养进行了降解试验,结果显示,加入外源微生物后纤维素降解率明显提高,嗜热侧孢霉可提高34.76%,放线菌可提高18.99%。通过在秸秆中加入辅料香菇菌糠,培养后秸秆的纤维素含量由原来的32.11%降至14.19%,降解率达55.81%。加入外源微生物的秸秆降解过程具有升温快、温度高及高温维持时间长等优点。加入微生物的秸秆降解高温维持8 d,对照为6 d。秸秆降解过程中的最高温度分别为63℃和58℃。为下一步外源微生物的进一步研究及菌糠的大量利用提供参考。     

Effect of Zytron and Its Degradation Products on Soil Microorganisms

There was no adverse effect of Zytron, o-2,4-dichlorophenyl o-methyl isopropyl phosphoramidothioate, a herbicide, upon molds, actinomycetes, and soil bacteria in field plots, or upon selected soil microorganisms in model systems. 2,4-Dichlorophenol, a degradation product, was found to be toxic at levels above 10 ppm to molds, but levels this high were not found in soil from treated plots. Aspergillus clavatus degraded both Zytron and 2,4-dichlorophenol. Sodium o-methyl isopropyl phosphoramidothioate, another degradation product of Zytron, stimulated the growth of a species of Penicillium.     

In Vitro Stimulation of Forage Fiber Degradation by Ruminal Microorganisms with Aspergillus oryzae Fermentation Extract

Aspergillus oryzae fermentation extract (Amaferm) was evaluated for its ability to influence degradation of brome grass and switchgrass fiber fractions by mixed ruminal microorganisms in vitro. Addition of Amaferm at a concentration of 0.067 mg/ml, which is approximately the concentration found in the rumen ecosystem (0.06 mg/ml), increased the degradation of brome grass neutral detergent fiber (NDF) by 28% after fermentation for 12 h (P < 0.01), but had no effect after fermentation for 24 or 48 h. The levels of degradation of both the cellulose and hemicellulose fractions were increased after fermentation for 12 h (P < 0.01). Additions of 0.08 and 8% (vol/vol) Amaferm filtrate (12.5 g/100 ml) stimulated degradation of switchgrass NDF by 12 and 24% (P < 0.01), respectively, after fermentation for 12 h; when 80% filtrate was added, degradation was decreased by 38%. The concentrations of total anaerobes in culture tubes containing 80% filtrate were 5 times greater than the concentrations in the controls; however, the concentrations of cellulolytic organisms were 3.5 times lower than the concentrations in the controls (P < 0.05). These results suggested that the filtrate contained high concentrations of soluble substrate which did not allow the cellulolytic organisms to compete well with other populations. The remaining concentrations of esterified p-coumaric and ferulic acids were lower at 12 h in NDF residues obtained from fermentation mixtures supplemented with Amaferm. Because the total anaerobes were not inhibited in fermentation mixtures containing Amaferm, antibiotics are unlikely to be involved as a mode of action for increasing NDF degradation. The possibility that Amaferm contains enzymes (possibly esterases) that may play a role in stimulating the rate of fiber degradation by mixed ruminal microorganisms by removal of plant cell wall phenolic acid esters is discussed.     

微生物在水环境污染物降解中的应用

每年有大量来自工业、农业、养殖业和城市污水处理厂的废水被排入到水环境中, 因此, 地球上的水环境面临大量来自生活废水、工农业废水、非法排放的废水及其它废水的污染物质(如抗生素、杀虫剂、除草剂、烃等)的严重挑战, 特别是近年来随着集约化养殖的发展, 废水污染问题日益突出, 并且随着分析手段的进步, 能够检测到被排入水环境中的化学污染物质也越来越多, 这些化学污染物对水环境中的生物产生有害影响。但是, 微生物在污染控制上具有许多重要的作用。因此, 本文对微生物在水环境污染物降解中的应用进行了评论。结果表明微生物主要是应用在水产养殖水中, 而在其它的水体系(如河、湖、海)的应用较少。     

微生物在水环境污染物降解中的应用（英文稿）

每年有大量来自工业、农业、养殖业和城市污水处理厂的废水被排入到水环境中, 因此, 地球上的水环境面临大量来自生活废水、工农业废水、非法排放的废水及其它废水的污染物质(如抗生素、杀虫剂、除草剂、烃等)的严重挑战, 特别是近年来随着集约化养殖的发展, 废水污染问题日益突出, 并且随着分析手段的进步, 能够检测到被排入水环境中的化学污染物质也越来越多, 这些化学污染物对水环境中的生物产生有害影响。但是, 微生物在污染控制上具有许多重要的作用。因此, 本文对微生物在水环境污染物降解中的应用进行了评论。结果表明微生物主要是应用在水产养殖水中, 而在其它的水体系(如河、湖、海)的应用较少。     

微生物在水环境污染物降解中的应用

每年有大量来自工业、农业、养殖业和城市污水处理厂的废水被排入到水环境中,因此,地球上的水环境面临大量来自生活废水、工农业废水、非法排放的废水及其它废水的污染物质(如抗生素、杀虫剂,除草剂、烃等)的严重挑战,特别是近年来随着集约化养殖的发展,废水污染问题日益突出,并且随着分析手段的进步,能够检测到被排入水环境中的化学污染物质也越来越多,这些化学污染物对水环境中的生物产生有害影响.但是,微生物在污染控制上具有许多重要的作用.因此,本文对微生物在水环境污染物降解中的应用进行了评论.结果表明微生物主要是应用在水产养殖水中,而在其它的水体系(如河、湖、海)的应用较少.     

Isolation of Microorganisms Growing on Phthalate Esters and Degradation of Phthalate Esters by Pseudomonas acidovorans 256–1

Many microorganisms (17 strains of gram-positive bacteria, 8 strains of gram-negative bacteria, 2 strains of fungi) capable of assimilating di-2-ethyl hexyl phthalate (DEHP) were isolated from soil and other natural sources. When Pseudomonas acidovorans 256–1 among these microorganisms was aerobically cultured in media containing 0.5 % of DEHP, DEHP disappeared completely in 72 hr when assayed gaschromatographically. Most of phthalate esters could be assimilated, regardless of their side-chain types. In addition, branched-alkyl phthalate was assimilated better than n-alkyl phthalate. Based on degradation rate of n-alkyl phthalate in relation to its side chain and carbon number, two peaks were observed in n-alkyl phthalate with four and seven carbon number on its side-chain.     

Degradation of Phthalate and Di-(2-Ethylhexyl)phthalate by Indigenous and Inoculated Microorganisms in Sludge-Amended Soil

The metabolism of phthalic acid (PA) and di-(2-ethylhexyl)phthalate (DEHP) in sludge-amended agricultural soil was studied with radiotracer techniques. The initial rates of metabolism of PA and DEHP (4.1 nmol/g [dry weight]) were estimated to be 731.8 and 25.6 pmol/g (dry weight) per day, respectively. Indigenous microorganisms assimilated 28 and 17% of the carbon in [¹⁴C]PA and [¹⁴C]DEHP, respectively, into microbial biomass. The rates of DEHP metabolism were much greater in sludge assays without soil than in assays with sludge-amended soil. Mineralization of [¹⁴C]DEHP to ¹⁴CO₂ increased fourfold after inoculation of sludge and soil samples with DEHP-degrading strain SDE 2. The elevated mineralization potential was maintained for more than 27 days. Experiments performed with strain SDE 2 suggested that the bioavailability and mineralization of DEHP decreased substantially in the presence of soil and sludge components. The microorganisms metabolizing PA and DEHP in sludge and sludge-amended soil were characterized by substrate-specific radiolabelling, followed by analysis of ¹⁴C-labelled phospholipid ester-linked fatty acids (¹⁴C-PLFAs). This assay provided a radioactive fingerprint of the organisms actively metabolizing [¹⁴C]PA and [¹⁴C]DEHP. The ¹⁴C-PLFA fingerprints showed that organisms with different PLFA compositions metabolized PA and DEHP in sludge-amended soil. In contrast, microorganisms with comparable ¹⁴C-PLFA fingerprints were found to dominate DEHP metabolism in sludge and sludge-amended soil. Our results suggested that indigenous sludge microorganisms dominated DEHP degradation in sludge-amended soil. Mineralization of DEHP and PA followed complex kinetics that could not be described by simple first-order equations. The initial mineralization activity was described by an exponential function; this was followed by a second phase that was described best by a fractional power function. In the initial phase, the half times for PA and DEHP in sludge-amended soil were 2 and 58 days, respectively. In the late phase of incubation, the apparent half times for PA and DEHP increased to 15 and 147 days, respectively. In the second phase (after more than 28 days), the half time for DEHP was 2.9 times longer in sludge-amended soil assays than in sludge assays without soil. Experiments with radiolabelled DEHP degraders suggested that a significant fraction of the ¹⁴CO₂ produced in long-term degradation assays may have originated from turnover of labelled microbial biomass rather than mineralization of [¹⁴C]PA or [¹⁴C]DEHP. It was estimated that a significant amount of DEHP with poor biodegradability and extractability remains in sludge-amended soil for extended periods of time despite the presence of microorganisms capable of degrading the compound (e.g., more than 40% of the DEHP added is not mineralized after 1 year).