共查询到18条相似文献,搜索用时 46 毫秒
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以结缕草属植物DNA为模板,应用正交设计法对简单重复序列(simple sequence repeats,SSR)反应体系中的各个主要影响因子进行了优化筛选,并通过比较不同浓度的模板DNA对聚合酶链式反应(polymerase chain reaction,PCR)的影响,确立了适合结缕革属植物SSR-PCR反应的最佳体系.结果表明,10μl的SSR反应体系中各组分的最适浓度分别为:10×PCR缓冲液,Mg2+ 2.5mmol/L,dNTP 200μmol/L,左右引物分别为0.6μmol/L,Taq DNA聚合酶0.5U,模板DNA的用量在30~90ng均可.利用该优化体系,通过30对SSR引物对包含结缕草属植物4个种的10份材料进行了种质鉴定,结果发现Xgwm系列SSR引物可以有效地用于结缕草属植物不同种源间的鉴定及遗传多样性研究.其中有3对引物Xgwm459-6A、Xgwm149-4B和Xgwm135-1A因具有特异性条带或条带的缺失可以很明显地将大穗结缕草Z010与其他材料区分开来,在抗寒性和青绿期两极端类型材料的研究中发现,引物Xgwm484-2D和Xgwm44-7D均在抗素性弱的部分材料和青绿期长的部分材料中扩增出一条抗寒性强和青绿期短的材料中没有的特异带,且两对引物中具有特异带的材料具有较高的一致性,初步认为这两标记可能与结缕革属植物的抗寒性或青绿期相关. 相似文献
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通过对苹果黑星病菌基因组DNA的SSR反应中一些重要参数进行优化,结果表明,最适反应体系为:2 5μL体系中,10×Buffer Mg Cl2 2 0 mm ol/ L 2 .5μL ,d NTP 10 0μmol·L- 1 、引物0 .5μmol·L- 1 、Taq DNA聚合酶1.5 U ,DNA模板2 m g·L- 1 ,dd H2 O 19.5μL .PCR扩增程序为93℃,2 min,5 7℃,30 s,1个循环;72℃,1m in,93℃,30 s,5 7℃,30 s,4 0个循环;72℃,10 min. 相似文献
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目的:以高粱丝黑穗病2381(抗病)、矮四(感病)为材料,以优化SSR反应体系为 目的.方法:采用CTAB法提取高粱基因组总DNA,用SSR分子标记技术对其进行多态性扩增, 通过对体系中不同的Taq酶浓度、模板浓度、dNTP浓度和引物浓度的梯度分析. 结果:建立 并优化了的SSR-PCR反应体系为20ìl反应体系:dNTP浓度为200ìmol/L、Taq酶浓度为1.5U 、 DNA浓度为100ng和引物浓度为0.4ìmol/L.达到了较理想的扩增效果.用该体系对94对SSR 引 物进行了筛选,其中47对引物扩增出了多态性谱带,其中Xtxp3和Xtxp13在抗感的品种间扩 增出了差异谱带.结论:应用优化的SSR反应体系可以对高粱丝黑穗病基因进行分析. 相似文献
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重金属诱导拟南芥原生质体DNA 损伤的单细胞凝胶电泳检测 总被引:5,自引:1,他引:5
以拟南芥原生质体为实验体系, 研究不同浓度的3种重金属离子对拟南芥原生质体的毒性和DNA损伤的差异。结果表明, 用1-5 mmol.L-1的Zn2+、Cd2+ 和Cu2+分别处理的拟南芥原生质体, 2 小时内活力逐渐下降, 并表现出明显的浓度依赖性;与相同浓度的Cd2+ 和Cu2+ 相比, Zn2+对拟南芥原生质体活力的影响程度较小, 表现出较低的毒性。单细胞凝胶电泳检测发现,用0.1-0.8 mmol .L-1的Zn2+、Cd2+ 和Cu2+ 分别处理拟南芥原生质体30 分钟, 以OTM值表示的原生质体DNA损伤量随重金属离子浓度的增加而递增; 相同浓度(0.5 mmol.L-1)的3种重金属离子相比, Zn2+对原生质体的遗传毒性明显低于Cu2+ 和Cd2+。综合原生质体活力和DNA损伤的单细胞凝胶电泳检测结果, 发现Zn2+对拟南芥原生质体的遗传毒性较低, 而Cd2+ 和Cu2+的遗传毒性较高。本研究建立的拟南芥原生质体实验体系, 结合运用单细胞凝胶电泳技术, 能够快速、灵敏地检测重金属对植物细胞的遗传毒性。 相似文献
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以拟南芥原生质体为实验体系,研究不同浓度的3种重金属离子对拟南芥原生质体的毒性和DNA损伤的差异。结果表明,用1-5mmol·L^-1的Zn^2+、Cd^2+和Cu^2+分别处理的拟南芥原生质体,2小时内活力逐渐下降,并表现出明显的浓度依赖性:与相同浓度的Cd^2+和Cu^2+相比,Zn^2+对拟南芥原生质体活力的影响程度较小,表现出较低的毒性。单细胞凝胶电泳检测发现,用0.1-0.8mmol·L^-1的Zn^2+、Cd^2+和Cu^2+分别处理拟南芥原生质体30分钟,以OTM值表示的原生质体DNA损伤量随重金属离子浓度的增加而递增:相同浓度(0.5mmol·L^-1)的3种重金属离子相比,Zn^2+对原生质体的遗传毒性明显低于Cu^2+和Cd^2+。综合原生质体活力和DNA损伤的单细胞凝胶电泳检测结果,发现ZnO^2+对拟南芥原生质体的遗传毒性较低,而CdO^2+和Cu^2+的遗传毒性较高。本研究建立的拟南芥原生质体实验体系,结合运用单细胞凝胶电泳技术,能够快速、灵敏地检测重金属对植物细胞的遗传毒性。 相似文献
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珍稀濒危树种毛红椿微卫星DNA分离及SSR反应体系优化 总被引:11,自引:0,他引:11
本研究以江西宜丰种源毛红椿为材料,成功提取其基因组DNA。利用改良的链亲和素磁珠法亲和捕捉出毛红椿基因组微卫星DNA片断,并构建了富含微卫星的基因组文库。从构建的基因组文库中随机挑选了63个单克隆进行测序,其中50个单克隆成功测序,含有微卫星的单克隆有18个,并根据测序结果设计并合成SSR引物18对。利用所合成的引物优化SSR反应体系,对影响SSR反应的各个因子进行了探讨。确定了模板DNA浓度最适浓度为30ng;dNTP的最适浓度为0.3mmol·L-1;0.3μmol·L-1是引物在反应体系中的最合适浓度。建立了重复性好、稳定性好的SSR反应体系,为下一步进行毛红椿群体遗传结构和遗传变异研究提供了技术支持。 相似文献
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目的:找到一种可用于高粱抗丝黑穗病SSR-PCR扩增最适宜的反应体系。方法:利用单因素体系优化的方法,对SSR-PCR反应体系中Taq酶、dNTPs、MgCl2、模板DNA以及引物用量进行了优化,并且用不同引物、不同模板DNA对该优化结果进行验证。结果:实验表明,Taq酶、dNTPs、MgCl2、模板DNA以及引物的不同用量均对PCR反应结果有显著的影响。最适宜高粱抗丝黑穗病20μl SSR-PCR的反应体系为1U/μl Taq酶2.5μl,10mmol/L dNTPs 1.0μl,25mmol/L MgCl21.5μl,模版DNA2.0μl(50ng),10μmol/L引物1.5μl,10×Buffer 2.0μl。验证结果表明,该体系扩增出的条带清晰且稳定。结论:该结果为今后利用SSR-PCR标记技术研究分析高粱抗丝黑穗病奠定了基础。 相似文献
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光萼荷属植物SSR反应体系确立与指纹图谱构建 总被引:2,自引:1,他引:2
利用正交试验设计优化并确立光萼荷属(Aechmea)植物SSR反应体系,构建部分光萼荷属植物的SSR分子指纹图谱。结果表明:光萼荷属植物的最佳SSR反应体系为10 μL总体积包括1×PCR buffer、Mg2+ 2.0 mmol·L-1、dNTPs 200 μmol·L-1、引物2.5 μmol·L-1、模板DNA 90 ng和Taq DNA聚合酶1.5 U。利用该体系和6对SSR引物对15份光萼荷属植物进行扩增反应和电泳检测,其中M1、M3、M4等3对SSR引物扩增图谱清晰、多态性较高,均能将该15份光萼荷属植物鉴别出来,初步建立了15份光萼荷属植物的SSR分子指纹图谱,进一步证明该SSR反应体系稳定可靠,可以有效用于光萼荷属植物种质资源鉴定。 相似文献
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M. TOKARSKA-SCHLATTNER A. FINK F. J. CASTILLO P. CRESPI M. CREVECOEUR H. GREPPIN P. TACCHINI 《Plant, cell & environment》1997,20(9):1205-1211
The protein pattern of leaf plasma membranes from Arabidopsis thaliana (L.) Landsberg erecta was analysed in order to detect changes induced by acute short-term ozone treatment. Plasma membranes were isolated 0, 3 and 8 h after the end of a 2 h fumigation of the plants with 500 nmol mol?1 of O3. Proteins extracted from plasma membranes were separated by high-performance two-dimensional polyacrylamide gel electrophoresis. Eight hours after the end of fumigation, one new protein appeared and the amounts of two other proteins increased significantly. The reported study is a first step towards the identification of plasmalemma proteins altered by ozone and to a more detailed characterization of structural changes occurring in the plasma membrane after ozone exposure. 相似文献
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Late flowering monogenic mutants of Arabidopsis thaliana (L.) Heynh. at the loci co, gi, fca, fve, fwa, fha, fpa, fy and their corresponding wild type, Landsberg erecta , were analysed by two-dimensional gel electrophoresis. All plants were grown under continuous light and proteins were extracted from leaves of the same age (20-day-old). The polypeptide patterns of the mutants at the loci co, gi, fca, fve, fwa, fha, fpa , and Landsberg erecta were identical. The mutant at the fy locus showed a qualitative difference with Landsberg erecta . Crosses were made between this line and the wild type Landsberg erecta . F2 plants, resulting from autopollination of the hybrid, were analysed and showed no cosegregation between the observed protein and the flowering phenotype, indicating that these two lines differ by more than a single mutation. 相似文献
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Huang Bai-qu 《植物学报(英文版)》1990,32(1)
This study was aimed at the characterization of the major storage proteins in Arabidopsis thaliana. Two major protein fractions, i.e., the fraction Ⅰ and Ⅱ proteins, were isolated from the extract of mature seeds of this plant by molecular seive gel filtration chromatography. Various polyacrylarnide gel electrophoretic techniques were used to study the properties and polypeptide compositions of these two protein fractions. In was shown that during the SDS gel electrophoresis, fraction Ⅰ protein was separated into 6 major bands with the mol. was. of 34, 31, 29, 28 and 19-20 kD, respectively, whereas Fraction Ⅱ protein migrated as 3 low mol. wt. bands (10-12 kD) on the same gel. Non-denaturing native gel electrophoresis revealed that fraction Ⅰ was a neutral protein and Fraction Ⅱ was a positively charged basic protein with an isoelectric point (pI) higher than 8.8. Fraction I protein was further separated into at least 16 polypeptides in isoelectric focusing/SDS two-dimensional gel electrophoresis, i.e. each SDS band contained 3-4 polypeptides with the same mol. wt. but different pis. This suggested a more complex polypeptide composition of this protein. The properties of fraction Ⅰ and Ⅱ proteins were in good accordance with that of the 12s and 1.7s storage globulins in seeds of many other dicotyledonous plants, and therefore had been characterized as the two major seed storage proteins in this species. These two storage globulins were shown to be accumulated within a defined period during the late stage of seed development (12-14 DAF) and became predominant protein components in mature seeds. In the mean time, a few points in relation to the polypeptide composition and subunit molecular configuration of the 12s globulin were noted. 相似文献
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We isolated 12 highly conserved polymorphic microsatellite loci for the yellow‐cress species Rorippa amphibia and Rorippa sylvestris. We used a partial genomic library enriched for several repeat motifs. Obtained sequences containing repetitive elements were blasted and aligned with the Arabidopsis thaliana sequence. We evaluated the cross‐species compatibility of primers designed from sequences either aligning strongly or weakly with A. thaliana. The former proved much more efficient in obtaining primers that worked in both species. The developed conserved primers for microsatellite loci provide excellent markers for studying segregation, gene flow and hybridization in the genus Rorippa. 相似文献
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拟南芥NADPH氧化酶AtrbohD和AtrbohF在脱落酸(abscisic acid,ABA)抑制主根伸长、ABA诱导气孔关闭以及植物应答干旱、盐及病菌侵染等逆境胁迫反应中发挥重要作用,但这2个蛋白亚基缺失对拟南芥(Arabidopsis thaliana)蛋白质组的影响还未见报道。我们以营养土中生长16 d的野生型及AtrbohD和AtrbohF双基因突变体atrbohD1/F1叶片为材料进行蛋白组学分析,在双向电泳图谱上可分辨出约1 000个蛋白点,且蛋白表达谱存在差异。选取42个显著差异蛋白点进行MALDI-TOF/TOF质谱鉴定,成功鉴定出20个差异蛋白,这些蛋白主要与氧化还原、能量代谢、蛋白代谢、转录和信号传导等相关,还有一些蛋白功能未知。 相似文献
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Chlorophylls are essential for photosynthesis. Chlorophyll biosynthesis is catalyzed by a series of enzyme complexes, such as Mg protoporphyrin IX methyltransferase. A yellow mutant of Arabidopsis was isolated using an enthyl methane sulfonate (EMS) mutagenesis strategy. Chlorophyll content dramatically reduced and grana stacking was absent in the mutant. Genetic analysis indicated that the mutant was controlled by a single recessive gene. Using map based cloning strategy, the gene responsible for the mutant phenotype was mapped to a region of 114 kb between the molecular markers F13M23 and T30C3 on chromosome 4, in which the CHLM gene encoding Mg protoporphyrin IX methyltransferase was included. The mutant was proved to be an allelic mutant of CHLM gene by sequencing and allelism test and then was designated as chlm 4. Gly59 of CHLM was replaced by Glu59 in chlm 4, which indicated that Gly59 was essential for the function of Mg protoporphyrin IX methyltransferase. 相似文献
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Junjie Zou † Lianfen Song † Wenzheng Zhang Yi Wang Songlin Ruan Wei-Hua Wu 《植物学报(英文版)》2009,51(5):438-455