用ISSR标记研究高卢蜜环菌系统发生学的尝试

用ISSR(Inter-Simple Sequence Repeat)标记对黑龙江省牡丹江地区高卢蜜环菌的系统发生学进行了研究,用6个引物对35个菌株的DNA模板进行扩增。结果表明该地区的35个菌株分属3个不同的发育系,并且3个发育系在地理分布上是交错在一起的。同时表明ISSR标记是研究蜜环菌系统发育关系的理想的分子标记手段。     

法国蜜环菌Armillaria gallica菌株遗传多样性的ISSR分析

在中国东北地区共采集到53个法国蜜环菌Armillaria gallica菌株,用ISSR（Inter-Simple Sequence Repeat）标记技术对这些菌株进行遗传多样性分析。用6个ISSR引物扩增所得条带表明,ISSR标记在蜜环菌中存在较高的多态性;亲缘关系树状图表明,有3个菌株遗传分化明显;其余50个分别来自3个不同地理居群的菌株聚成一类,亲缘关系较近,没有表现出地理隔离。     

琼脂固体培养基培养蜜环菌菌索总DNA的提取

野外采集的蜜环菌[Armillaria mellea(Vahl.ex Fr.)Quel]在提取DNA前需要分离获得纯化的菌丝体。常规液体培养获得菌丝团的方法感杂率较高,采集固体培养基表面cellophane膜上形成的菌丝则难以获得足量的DNA提取材料。蜜环菌细胞内含有大量多醣类物质,也使得蜜环菌高质量DNA的提取存在一定的困难。本研究通过改进试验,提供一个直接从琼脂固体培养基培养的蜜环菌菌索中提取高质量DNA的方法。其中样品的预先冻融处理方法可以促使蜜环菌菌索与琼脂分离;而在裂解提取缓冲液裂解材料细胞后加入1.25 mol/L KAc溶液,则有利于除去蜜环菌细胞内的多醣类物质以及残留的少量琼脂。通过琼脂糖电泳、紫外分光光度计对DNA浓度及OD值的测定、ISSR引物的PCR扩增以及酶切产物的PCR扩增等方法的检测,结果均表明该方法提取的DNA质量较好,符合进一步进行分子生物学研究的要求。     

中国与欧洲高卢蜜环菌的遗传多样性

高卢蜜环菌(Armillaria gallica)为北半球广布种,不同大陆间的菌株遗传相似性和多样性水平能反映出该种在洲际大陆尺度上的地理遗传变异关系。作者用ISSR(inter-simple sequence repeat)分子标记技术,对从中国和欧洲收集到的高卢蜜环菌79个菌株进行了遗传多样性分析。用6个ISSR引物扩增得到210个位点,其中多态性位点(频率<0.95)为202个,占96.2%,平均每个引物多态位点多达33.6个,表明ISSR标记在蜜环菌中存在较高的多态性。根据非加权类平均法(UPGMA)聚类分析,中国53个菌株中的49个在0.773的相似性水平上聚成了中国类群(China group);而欧洲26个菌株遗传分化较大,分别在0.775和0.763的相似性水平上聚成了欧洲类群A(Europe group A)和B(Europe group B);2个欧洲类群间的相似性水平仅为0.738,而欧洲类群A与中国类群间的相似性却达到了0.770;两个大陆均有少数菌株表现出较为明显的遗传分化,个别菌株的种内遗传相似性甚至低于蜜环菌种间的遗传相似性。结果表明,中欧两个大陆间的A.gallica菌株因地理隔离已经表现出明显的遗传分化,处于异域物种形成过程中;欧洲大陆的菌株遗传分化更为明显,可能是两个大陆A.gallica菌株的起源地。     

富硒条件下蜜环菌菌株硒耐受性及胞外酶生物活性的研究

[目的]通过对蜜环菌(Armillaria mellea)的富硒驯化,研究各菌株硒耐受性、有机硒含量及生物活性的变化规律,从而获得生物活性更强的蜜环菌,并对富硒蜜环菌的生物学特征进行初步研究.[方法]以Na2SeO3为无机硒试剂对蜜环菌进行富硒驯化;采用氢化物原子荧光光谱法测定蜜环菌的硒含量,热水浴法测定蜜环菌的无机硒...     

四株昭通乌天麻共生蜜环菌的生理生化特征及其分子鉴定

目的对4株昭通乌天麻(Gastrodia elata)共生蜜环菌(Armillaria mella)的生理生化活性进行研究,并鉴定其分类地位。方法通过测定不同碳源和氮源对蜜环菌生长以及胞外酶活性的影响,掌握该蜜环菌生理生化特性,再结合rDNA-IGS序列分析方法进行鉴定。结果不同蜜环菌需要不同的碳源、氮源。3种胞外酶中木聚糖酶活性最大,其次是羧甲基纤维素酶,漆酶活性最小。供试蜜环菌与云南、贵州地区天麻共生蜜环菌以及猪苓共生蜜环菌的亲缘关系比较远。结论蜜环菌能否作为天麻共生菌与其分类地位无关。     

紫云英ISSR引物的筛选及PCR反应体系的优化

以紫云英为研究材料,用哥伦比亚大学(UBC)公布的100条ISSR引物和11种株系紫云英品种的DNA为模板进行PCR扩增,筛选出33条扩增条带较好的ISSR引物,对其中的ISSR引物进行梯度PCR,筛选出最佳的退火温度。再采用正交试验和单因素试验相结合的方法对紫云英ISSR-PCR反应体系的5种因素(模板、Mg2+、TaqDNA聚合酶、dNTP及引物)进行优化浓度。确立了适合紫云英的ISSR分析的反应体系。在25μl反应体系中,其反应浓度为:DNA模版50.00ng,Mg2+2.00mol/L,Taq聚合酶1.0 U,dNTP 0.25mmol/L,引物0.20μmol/L,2.5μl 10×buffer。本试验为以后利用ISSR技术进行紫云英遗传多样性分析和物种保护奠定了技术基础。     

蜜环菌菌索分化的差异蛋白质组学研究

菌索是蜜环菌与宿主互作的组织结构,蜜环菌菌丝形成菌索的分子机制尚不清楚.本研究采用SWATH-MSALL非标记定量蛋白质组学技术,首次对Armillaria mellea菌丝形成菌素过程的蛋白质组学进行了系统研究.在蜜环菌菌丝和菌索中共鉴定蛋白1724个(global FDR 1％),定量蛋白1179个.与菌丝相比,蜜...     

胡麻专化型尖孢镰刀菌ISSR-PCR最佳反应体系的建立

采用正交试验设计原理,对尖孢镰刀菌ISSR-PCR反应体系中的5种主要因素进行优化筛选,确立了适合尖孢镰刀菌ISSR分析的反应体系,即25μL PCR反应体积中合有20 ng模板DNA、1 U Taq酶、0.4 μmol/L引物、0.2 mmol/LdNTPs、4.0 mmol/L Mg2+和2.5 μL 10 × buffer.PCR反应最佳退火温度根据引物而定,在此基础上筛选出12条扩增稳定、多态性丰富的ISSR引物.此研究为今后利用ISSR技术分析尖孢镰刀菌遗传多样性和群体结构奠定了基础.     

同宗配合蜜环菌与欧美异宗配合蜜环菌狭义种的分子系统学关系*

从亚洲、欧洲和北美收集18个蜜环菌狭义种菌株,PCR扩增其rDNA的IGS和ITS区域,用AluI、HaeIII、HinfI和TagI四种限制性内切酶进行酶切,同时用随机扩增微卫星(RAMS)多态性,对蜜环菌狭义种的进行了遗传多样性和分子系统学分析。结果蜜环菌狭义种的IGS和ITS-RFLP类型比以前报道的更多,亚洲、欧洲和北美菌株都具有比较明显的特征片段,通过ITS和IGS图谱可将三个大陆的菌株区分开,其中IGS-HinfI图谱能完全区分3个大陆的菌株。RFLP数据的系统学分析表明,该种存在明显的大陆遗传分化,亚、欧、北美的群体分属三个相互独立的进化系,北美群体IGS变异程度较小,ITS变异程度极高;而欧洲群体IGS的变异程度较大,多态性高,ITS变异程度非常小。RAMS系统分析表明,中国、日本和非洲的同宗配合蜜环菌属于一个系统发育系,该发育系同欧洲和北美的异宗配合种的两个发育系分属3个不同的独立进化分支。据此建议欧洲和北美的异宗配合蜜环菌应作为蜜环菌的两个亚种。     

Study on Ultrastructure and Localization of Acid Phosphatase of Gastrodia elata Cortical Cells in Their Digestive Process of Armillaria mellea

In order to study the mechanism of the digestive process of Armillaria mellea in Castrodia data, electron microscopy and cytochemical method for determination of acid phosphatase activity was employed. The provacuoles were formed by means of expanded or convoluted ER under the stimulation of cortical cells and large cells of Gastrodia data by Armillaria mellea. A product of acid phosphatase (lead phosphate deposits) occured on the tonoplast. The papillae were produced in the cell wall of cortex in Gastrodia data when Armillaria mellea penetrated into its cortex. Our results showed that the enzyme was not released from cell of Armillaria mellea. A number of small vacuoles in the cortical cells disappeared. At the same time, lead phosphate deposits on the Armillaria mellea hyphae wall were observed and than Armillaria mellea hyphae wall was going to be digested, and the hyphae lost their structure. The activity of Armillaria mellea hyphae was not observed in the large cell of Gastrodia data. A great deal of small vacuoles and mitochondria were produced, at the same time the renewable nuclei and nuclolar vacuoles etc. appeared in the large cells of Gastrodia data under the stimulation of Armillaria mellea.     

西藏高原黄蘑菇的保鲜研究

为了延长黄蘑菇的保鲜期,利用酸性电解水（acidic electrolyzed water,AEW）、短波紫外线（short-wave ultraviolet,UVC）和臭氧（O₃）对采后黄蘑菇进行单一和复合保鲜处理,观察黄蘑菇经保鲜袋包装和低温储藏后外观品质的变化,并检测其褐变度、硬度、失重率以及多酚氧化酶（polyphenoloxidase,PPO）、苯丙氨酸解氨酶（phenylalanine ammonia-lyase,PAL）活性等指标数据。结果表明,UVC和O3处理均能够有效延长黄蘑菇的保鲜期,4 ℃冷藏可使黄蘑菇的保鲜期从10 d延长至42 d;而AEW并不适合用于含水量较少的高原黄蘑菇的保鲜,外来水分的带入反而会加速黄蘑菇的腐烂。研究结果对于黄蘑菇保鲜具有理论指导意义。     

蜜环菌饮料对机体活性的调节作用研究

为了研究蜜环菌饮料对小鼠机体功能的影响,采用环磷酰胺(CY)造模法制作小鼠免疫抑制模型,通过灌胃不同剂量蜜环菌饮料,研究对小鼠机体免疫功能的影响,同时通过测定实验小鼠肠道中细菌总数、大肠杆菌数、乳酸菌和双歧杆菌数等,分析不同剂量的蜜环菌饮料对肠道菌相的影响,最后对小鼠进行了急性毒性试验研究,以检测饮料有无毒副作用。结果表明蜜环菌饮料可明显提高小鼠脾脏和胸腺指数,促进脾脏及胸腺的发育,促进巨噬细胞的吞噬活性,明显增强小鼠的免疫功能,同时还能促进小鼠肠道有益菌的生长,改善肠道微生物区系环境,饮料没有对小鼠产生任何的毒副作用。证明蜜环菌饮料不仅增强机体免疫功能,同时还增强肠道功能,保持和促进机体健康。     

青藏高原黄绿蜜环菌纯培养菌种的分离培养及分子鉴定

首次从采自青藏高原、与高原牧草嵩草属Kobresia草本植物形成外生菌根的黄绿蜜环菌Armillarialuteo-virens子实体中分离获得一组织分离菌株,运用rDNA-ITS和rDNA-IGS-1测序技术对该组织分离菌株是否为黄绿蜜环菌的纯培养菌种进行分子鉴定,并基于黄绿蜜环菌的5.8S/ITS和IGS-1序列进行核酸序列数据库GenBank同源性检索比对、构建系统发育树。结果表明,本研究获得的黄绿蜜环菌子实体组织分离菌株即为其纯培养菌种。基于ITS的系统发育分析表明黄绿蜜环菌与口蘑科内其它属间物种的系统发育关系较远;基于IGS-1的系统发育分析表明黄绿蜜环菌与蜜环菌属内的其它种序列差异较大,系统发育关系较远,而与Lepiota属内的部分种具有较近的系统发育关系。本研究首次基于分子手段对我国青藏高原的黄绿蜜环菌种进行了分离培养、分子鉴定和系统发育分析,为黄绿蜜环菌的科学分类提供了分子依据。     

Secrets of the subterranean pathosystem of Armillaria

Armillaria root disease affects fruit and nut crops, timber trees and ornamentals in boreal, temperate and tropical regions of the world. The causal pathogens are members of the genus Armillaria (Basidiomycota, Physalacriaceae). This review summarizes the state of knowledge and highlights recent advances in Armillaria research. Taxonomy: Armillaria includes more than 40 morphological species. However, the identification and delineation of species on the basis of morphological characters are problematic, resulting in many species being undetected. Implementation of the biological species' concept and DNA sequence comparisons in the contemporary taxonomy of Armillaria have led to the discovery of a number of new species that are not linked to described morphological species. Host range: Armillaria exhibits a range of symbioses with both plants and fungi. As plant pathogens, Armillaria species have broad host ranges, infecting mostly woody species. Armillaria can also colonize orchids Galeola and Gastrodia but, in this case, the fungus is the host and the plant is the parasite. Similar to its contrasting relationships with plants, Armillaria acts as either host or parasite in its interactions with other fungi. Disease control: Recent research on post-infection controls has revealed promising alternatives to the former pre-plant eradication attempts with soil fumigants, which are now being regulated more heavily or banned outright because of their negative effects on the environment. New study tools for genetic manipulation of the pathogen and characterization of the molecular basis of the host response will greatly advance the development of resistant rootstocks in a new stage of research. The depth of the research, regardless of whether traditional or genomic approaches are used, will depend on a clear understanding of where the different propagules of Armillaria attack a root system, which of the pathogen's diverse biolymer-degrading enzymes and secondary metabolites facilitate infection, and how the course of infection differs between resistant and susceptible hosts.     

Evaluation of partial tef1, rpb2, and nLSU sequences for identification of isolates representing Armillaria calvescens and Armillaria gallica from northeastern North America

Armillaria calvescens and Armillaria gallica are two of the most closely-related species of Armillaria in North America and have been difficult to distinguish from one another using morphological and molecular techniques. In an attempt to better distinguish these two species, partial sequences of the elongation factor-1 alpha (tef1), RNA polymerase II (rpb2), and nuclear large subunit (nLSU) genes were generated for 32 total isolates; 12 isolates each for A. calvescens and A. gallica, along with two isolates each of Armillaria gemina, Armillaria mellea, Armillaria sinapina, and Armillaria solidipes. Within the tef1 amplicon, five single nucleotide polymorphisms (SNPs) were present between A. calvescens and A. gallica. Phylogenetic reconstruction using the maximum likelihood (ML) and maximum parsimony (MP) methods showed that tef1 was the only gene capable of distinguishing A. calvescens from A. gallica, and additionally, all isolates representing the six northeastern North American species. Partial tef1 sequences grouped A. calvescens into a strongly-supported, monophyletic clade with bootstrap support (BS) values of 98/98% (ML/MP), while A. gallica was grouped into a monophyletic clade with lower BS support (76/59%). The results illustrate the utility of partial tef1 sequences for the identification of field isolates of Armillaria from northeastern North America.     

Molecular identification and phylogeny of Armillaria isolates from South America and Indo-Malaysia

Armillaria root rot is a serious disease, chiefly of woody plants, caused by many species of Armillaria that occur in temperate, tropical and subtropical regions of the world. Very little is known about Armillaria in South America and Southeast Asia, although Armillaria root rot is well known in these areas. In this study, we consider previously unidentified isolates collected from trees with symptoms of Armillaria root rot in Chile, Indonesia and Malaysia. In addition, isolates from basidiocarps resembling A. novae-zelandiae and A. limonea, originating from Chile and Argentina, respectively, were included in this study because their true identity has been uncertain. All isolates in this study were compared, based on their similarity in ITS sequences with previously sequenced Armillaria species, and their phylogenetic relationship with species from the Southern Hemisphere was considered. ITS sequence data for Armillaria also were compared with those available at GenBank. Parsimony and distance analyses were conducted to determine the phylogenetic relationships between the unknown isolates and the species that showed high ITS sequence similarity. In addition, IGS-1 sequence data were obtained for some of the species to validate the trees obtained from the ITS data set. Results of this study showed that the ITS sequences of the isolates obtained from basidiocarps resembling A. novae-zelandiae are most similar to those for this species. ITS sequences for isolates from Indonesia and Malaysia had the highest similarity to A. novae-zelandiae but were phylogenetically separated from this species. Isolates from Chile, for which basidiocarps were not found, were similar in their ITS and IGS-1 sequences to the isolate from Argentina that resembled A. limonea. These isolates, however, had the highest ITS and IGS-1 sequence similarity to authentic isolates of A. luteobubalina and were phylogenetically more closely related to this species than to A. limonea.     

Characterization of Armillaria isolates from tea (Camellia sinensis) in Kenya

Armillaria is a primary root rot pathogen of tea (Camellia sinensis) in Kenya. The main species presently described in this country are A. mellea and A. heimii. A survey covering fourteen districts of Kenya was carried out and forty-seven isolates of Armillaria collected. Cultural morphology, rhizomorph characteristics, somatic incompatibility and features of basidiomata were used to characterize the isolates, together with molecular analysis based on randomly amplified polymorphic DNA (RAPD), inter-simple sequence repeat (ISSR), restriction fragment length polymorphism (RFLP) of the internal transcribed spacer (ITS) and the intergenic spacer (IGS) regions and sequence of the IGS region. It can be concluded that two Armillaria species were present and they were different from A. mellea. The first group was morphologically similar to A. heimii but this was contradicted by the molecular data, suggesting that A. heimii could be a complex of several species. The second group was different from the first and morphological and molecular data strongly suggest that it could be a new Armillaria species.     

黑龙江省蜜环菌生物种的地理分布概况

自1999年至2002年间对黑龙江省境内几个主要林区中的蜜环菌生物种进行了调查、采集和鉴定,并对其寄主种类和子实体发生规律以及地理分布特点进行了总结分析。结果表明:黑龙江省境内至少存在5个蜜环菌生物种,即芥黄蜜环菌Armillaria sinapina,高卢蜜环菌A.gallica,黄盖蜜环菌A.luteopileata,奥氏蜜环菌A.ostoyae和中国生物种F;寄主包括10个针叶和阔叶树种;与其他几种蜜环菌生物种相比较,A.gallica是黑龙江省境内出现概率最大的一个生物种;根据采集经验发现,温度和湿度是影响子实体发生的主要因子。