Conservation genetics of the franciscana dolphin in Northern Argentina: population structure,by-catch impacts,and management implications

Evaluating population structure in the marine environment is a challenging task when the species of interest is continuously distributed, and yet the use of population or stock structure is a crucial component of management and conservation strategies. The franciscana dolphin (Pontoporia blainvillei), a rare endangered coastal cetacean, suffers high levels of by-catch all along its distribution range in the Western South Atlantic, and questions have been raised about boundaries or divisions for population management. Here we apply genetic tools to better understand population structure and migration, sex-biased dispersal, and to assess potential genetic and demographic impacts of by-catch. Our analyses, based on mtDNA control region sequences, reveal significant genetic division at the regional level and fine-scale structure within our study area. These results suggest that the population in northern Buenos Aires is the most isolated population in Argentina. We found no significant departure from an equal sex ratio among the by-caught animals. A few cases of multiple entanglements appeared to be mother–calf pairs based on field observations and individuals sharing the same mtDNA control region lineage. The distribution of haplotype frequencies observed could imply that some maternal lineages are more prone to be subject to higher rates of by-catch, although biopsy sampling is necessary to fully evaluate whether maternal lineage distributions are the same for biopsy sampled and by-caught animals. A genetic indication of population size disequilibrium was detected for all populations in Argentina, which is consistent with available rates of by-catch and abundance estimates. Collectively, our findings support the current scheme of larger recognized Franciscana Management Areas (FMA), but argue for a finer-scale subdivision within Northern Buenos Aires region (FMA IV). Finally, an integrated approach to promote conservation of this endangered small cetacean has to involve identification of genetic and demographic threats, a more sustainable fishery strategy to reduce by-catch, and designation of protected areas that are supported by underlying population structure for franciscana dolphins.     

Identifying critical habitat of the endangered vaquita (Phocoena sinus) with regional δ13C and δ15N isoscapes of the Upper Gulf of California,Mexico

The vaquita (Phocoena sinus) is the world's most endangered cetacean and has experienced a 60% reduction in the size of its population in the past decade. Knowledge of its basic ecology is essential for developing successful management plans to protect and conserve this species. In this study, we identified vaquita foraging areas by creating an isoscape of the Upper Gulf of California (UGC) based on sediment and zooplankton carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope values. Our results confirm that this species is confined to the western region of the UGC, which is characterized by relatively high δ¹⁵N values (sediments: 10.2‰ ± 2.0‰, zooplankton: 15.8‰ ± 1.3‰), higher sea surface temperatures (～16°C–25°C), higher concentrations of silt in sediments, and the highest turbidity. In contrast, the eastern region of the UGC had relatively low sediment (7.7‰ ± 2.4‰) and zooplankton (14.6‰ ± 1.0‰) δ¹⁵N values, and the highest concentrations of sand in sediments. Our approach is an effective use of marine isoscapes over a small spatial scale (<200 km) to identify the environmental characteristics that define the critical habitat for an extremely endangered marine mammal.     

Life history of the vaquita, Phocoena sinus (Phocoenidae, Cetacea)

The vaquita, Phocoena sinus , is the most endangered marine cetacean primarily due to incidental mortality in fishing nets. We examined a sample of 56 vaquitas to study the life history of this poorly known species. The age structure was bimodal, with 62% of the specimens from 0-2 years and 31% from 11-16 years; the sample contained no specimens from ages 3-6 years. The oldest individual was estimated to be 21 years old. All specimens less than three years old were sexually immature and all greater than six years old were mature. The asymptotic length of females (140.6 cm) was significantly greater than that of males (134.9 cm), although no difference was detected in asymptotic girth or body mass. Reproduction is synchronous; births occurred from late February to early April and maximum testes activity occurred from mid-March through to at least mid-April. Our observations from this small sample suggest that the calving interval is greater than one year. The sample was too small for many quantitative analyses, although it appears that lifespan, patterns of growth, age at sexual maturation, seasonal reproduction, and large testis size are similar to the harbour porpoise, P. phocoena , in a highly exploited and well-studied population from the Bay of Fundy. A significant difference, however, is that harbour porpoise females give birth annually, indicating that the rate of increase in the vaquita population is likely to be lower than that in the harbour porpoise. Without immediate cessation of fishing pressure, this fragile population will collapse, resulting in extinction of the vaquita.     

A NEW ABUNDANCE ESTIMATE FOR VAQUITAS: FIRST STEP FOR RECOVERY1

A line-transect survey specifically designed to estimate vaquita (Phocoena sinus) abundance over its entire range was carried out by three boats in the summer of 1997. There was a total of 125 sightings of vaquita groups, mainly due to the use of large 25 ± 150 binoculars, which were seven times more effective in detecting vaquitas than hand-held 7 ± binoculars. Results confirmed that the range of the vaquita is restricted to the northwestern corner of the Gulf of California, Mexico, but that the boundaries of the Upper Gulf of California and Colorado River Delta Biosphere Reserve do not correspond well with the distribution of vaquitas. The shallow water north of the town of San Felipe was found to have a higher density of animals than had been indicated by previous surveys. The total population size was estimated to be 567 animals, with a 95% confidence interval from 177 to 1,073. This estimate is an improvement over previous estimates, which had low numbers of sightings, relied on parameters taken from other species, and/or did not cover all areas where vaquitas could potentially be found. The 1997 estimate was more than twice the 1993 estimate, but there are several reasons why the numbers cannot be directly compared, and it should not be concluded the population is increasing. This first complete estimate of vaquita abundance can be a beginning for the recovery of this highly endangered species.     

50,000 years of genetic uniformity in the critically endangered Iberian lynx

Low genetic diversity in the endangered Iberian lynx, including lack of mitochondrial control region variation, is thought to result from historical or Pleistocene/Holocene population bottlenecks, and to indicate poor long-term viability. We find no variability in control region sequences from 19 Iberian lynx remains from across the Iberian Peninsula and spanning the last 50,000 years. This is best explained by continuously small female effective population size through time. We conclude that low genetic variability in the Iberian lynx is not in itself a threat to long-term viability, and so should not preclude conservation efforts.     

The use of carcasses for the analysis of cetacean population genetic structure: a comparative study in two dolphin species

Advances in molecular techniques have enabled the study of genetic diversity and population structure in many different contexts. Studies that assess the genetic structure of cetacean populations often use biopsy samples from free-ranging individuals and tissue samples from stranded animals or individuals that became entangled in fishery or aquaculture equipment. This leads to the question of how representative the location of a stranded or entangled animal is with respect to its natural range, and whether similar results would be obtained when comparing carcass samples with samples from free-ranging individuals in studies of population structure. Here we use tissue samples from carcasses of dolphins that stranded or died as a result of bycatch in South Australia to investigate spatial population structure in two species: coastal bottlenose (Tursiops sp.) and short-beaked common dolphins (Delphinus delphis). We compare these results with those previously obtained from biopsy sampled free-ranging dolphins in the same area to test whether carcass samples yield similar patterns of genetic variability and population structure. Data from dolphin carcasses were gathered using seven microsatellite markers and a fragment of the mitochondrial DNA control region. Analyses based on carcass samples alone failed to detect genetic structure in Tursiops sp., a species previously shown to exhibit restricted dispersal and moderate genetic differentiation across a small spatial scale in this region. However, genetic structure was correctly inferred in D. delphis, a species previously shown to have reduced genetic structure over a similar geographic area. We propose that in the absence of corroborating data, and when population structure is assessed over relatively small spatial scales, the sole use of carcasses may lead to an underestimate of genetic differentiation. This can lead to a failure in identifying management units for conservation. Therefore, this risk should be carefully assessed when planning population genetic studies of cetaceans.     

The importance of control populations for the identification and management of genetic diversity

A fundamental criterion for recognizing species or populations as potentially endangered is the presence/absence of genetic diversity. However, the lack of control populations in many studies of natural systems deprives one from unambiguous criteria for evaluating the genetic effects of small population size and its potential effects on fitness. In this study, I present an example of how the lack of adequate controls may lead to erroneous conclusions for understanding the role that population size may play in the preservation of genetic diversity and fitness of natural populations. The genetic analysis of a population of greater prairie chickens from Illinois, USA, between two time periods (1974–1987 and 1988–1993) in which the studied population experienced a substantial reduction in size and fitness showed no apparent associations between population size and genetic diversity. However, genetic analysis of museum specimens from early this century indicated that Illinois prairie chickens had originally higher levels of genetic diversity, which suggest the Illinois population was already bottlenecked by the 1970s. This study emphasizes the importance of using historical controls to evaluate the temporal dynamics of genetic variability in natural populations. The large number of museum collections worldwide may provide a valuable source of genetic information from past populations, particularly in species currently endangered as a result of human activities. This revised version was published online in July 2006 with corrections to the Cover Date.     

Conservation of the vaquita Phocoena sinus

• 1 The vaquita Phocoena sinus is a small porpoise that is endemic to the northern Gulf of California, Mexico. It is the most critically endangered marine small cetacean in the world. The most precise estimate of global abundance based on a 1997 survey is 567 (95% CI 177–1073).
• 2 Vaquitas mainly live north of 30°45′N and west of 114°20′W. Their ‘core area’ consists of about 2235 km² centred around Rocas Consag, 40 km east of San Felipe, Baja California. Genetic analyses and population simulations suggest that the vaquita has always been rare, and that its extreme loss of genomic variability occurred over evolutionary time rather than being caused by human activities.
• 3 Gill nets for fish and shrimp cause very high rates of by‐catch (entanglement) of vaquitas. Estimates of bycatch rates are from 1993–94 and refer to one of three main fishing ports: 84 per year (95% CI 14–155) using only data collected by observers and 39 per year (95% CI 14–93) using combined data from observers and interviews with fishermen. Boats from other ports may experience similar rates, and the total is probably well above what would be sustainable.
• 4 Other less well‐characterized and longer‐term risk factors include the potential for disturbance by trawling to affect vaquita behaviour, and the uncertain effects of dam construction on the Colorado River and the resultant loss of freshwater input to the upper Gulf. However, entanglement is the clearest and most immediate concern.
• 5 Progress towards reducing entanglement has been slow in spite of efforts to phase out gill nets in the vaquita’s core range, and the development of schemes involving compensation for fishermen. The Biosphere Reserve in the northern Gulf has fallen far short of its potential for vaquita conservation. On 29 December 2005, the Mexican Ministry of Environment declared a Vaquita Refuge that contains within its borders the positions of approximately 80% of verified vaquita sightings. In the same decree, the state governments of Sonora and Baja California were offered $1 million to compensate affected fishermen. The effectiveness of this major initiative remains to be seen.
• 6 The vaquita’s survival does not depend on more or better science but on improved management. As a funding priority, implementation of conservation measures and evaluation of their effectiveness should come ahead of more surveys or improved estimation of by‐catch.

     

Population structure of nuclear and mitochondrial DNA variation among South American Burmeister’s porpoises (<Emphasis Type="Italic">Phocoena spinipinnis</Emphasis>)

Little is known about the biology of Burmeister’s porpoises (Phocoena spinipinnis), a small cetacean species endemic to South American waters. Information on stock structure, however, is urgently needed, as the species suffers from considerable mortality due to local fishery activities throughout its distribution range. Using mitochondrial control region sequences and 11 species-specific microsatellite loci, we assessed the genetic differentiation among 118 stranded, incidentally or directly-caught Burmeister’s porpoises from different localities in Peruvian, Chilean, and Argentine waters. F-statistics and Bayesian clustering analyses indicate a major population differentiation along the South American Pacific coast, separating Peruvian from both Chilean and Argentine individuals. Interestingly, this population boundary is consistent with the population structure found in another sympatrically-occurring cetacean species: the dusky dolphin (Lagenorhynchus obscurus). Given that vulnerability to local depletion for South American coastal porpoises and dolphins is probably highest in the Peruvian population (due to high exploitation levels and recurrent El Niño events), the genetic data reported here considerably strengthen the need for conservation efforts focused on regulation of catches in local waters. Moreover, we discuss possible genetic differentiation among Burmeister’s porpoises (i) from the Atlantic and Pacific Ocean and (ii) from different Peruvian harbors. Finally, cross-species amplifications suggest that our newly-developed microsatellite markers will be useful in population genetic studies in the five other extant porpoise species.     

Temporal trends in genetic data and effective population size support efficacy of management practices in critically endangered dusky gopher frogs (Lithobates sevosus)

Monitoring temporal changes in population genetic diversity and effective population size can provide vital information on future viability. The dusky gopher frog, Lithobates sevosus, is a critically endangered species found only in coastal Mississippi, with low genetic variability as a consequence of isolation and population size reduction. Conservation management practices have been implemented, but their efficacy has not been addressed. We genotyped individuals collected 1997–2014 to determine temporal trends in population genetic variation, structure, and effective size. Observed and expected heterozygosity and allelic richness revealed temporally stable, but low, levels of genetic variation. Positive levels of inbreeding were found in each year. There was weak genetic structure among years, which can be attributed to increased effects of genetic drift and inbreeding in small populations. L. sevosus exhibited an increase in effective population size, and currently has an estimated effective size of 33.0–58.6 individuals, which is approximately half the census size. This large ratio could possibly be explained by genetic compensation. We found that management practices have been effective at maintaining and improving effective size and genetic diversity, but that additional strategies need to be implemented to enhance viability of the species.     

Genetic data confirm critical status of the reintroduced Dinaric population of Eurasian lynx

Eurasian lynx (Lynx lynx) reintroduction to the Dinaric Mountains is considered one of the most successful reintroductions of a large predator. Six reintroduced animals founded the population, which rapidly expanded from Slovenia, through Croatia, and all the way to Bosnia and Herzegovina. However, a decrease of the population size has been observed during the last 10–15 years. Considering that possible inbreeding depression would be additive to threats like poaching, traffic mortality and prey base depletion, another extinction of this species from the Dinaric Mountains is a real possibility. We analyzed 204 samples collected between 1979 and 2010 using twenty microsatellite loci and 900-bp mitochondrial DNA control region sequence to evaluate conservation genetics aspects of this endangered population. Both markers confirmed low genetic variability of the Dinaric lynx population, and considerable effective inbreeding (0.3) compared to the source Carpathian population. Our analysis of effective population size and microsatellite variability supported field observations of decreasing population number. As a natural recolonization is a very remote possibility, we recommend population augmentation from a large source population.     

A combined visual and acoustic estimate of 2008 abundance,and change in abundance since 1997, for the vaquita,Phocoena sinus

A line‐transect survey for the critically endangered vaquita, Phocoena sinus, was carried out in October–November 2008, in the northern Gulf of California, Mexico. Areas with deeper water were sampled visually from a large research vessel, while shallow water areas were covered by a sailboat towing an acoustic array. Total vaquita abundance in 2008 was estimated to be 245 animals (CV = 73%, 95% CI 68–884). The 2008 estimate was 57% lower than the 1997 estimate, an average rate of decline of 7.6%/yr. Bayesian analyses found an 89% probability of decline in total population size during the 11 yr period, and a 100% probability of decline in the central part of the range. Acoustic detections were assumed to represent porpoises with an average group size of 1.9, the same as visual sightings. Based on simultaneous visual and acoustic data in a calibration area, the probability of detecting vaquitas acoustically on the trackline was estimated to be 0.41 (CV = 108%). The Refuge Area for the Protection of the Vaquita, where gill net fishing is currently banned, contained approximately 50% of the population. While animals move in and out of the Refuge Area, on average half of the population remains exposed to bycatch in artisanal gill nets.     

Mitochondrial DNA variation, effective female population size and population history of the endangered Chinese sturgeon, Acipenser sinensis

The anadromous Chinese sturgeon (Acipenser sinensis), mainly endemic to the Yangtze River in China, is an endangered fish species. The natural population has declined since the Gezhouba Dam blocked its migratory route to the spawning grounds in 1981. In the near future, the completion of the Three Gorges Dam, the world's largest hydroelectric project, may further impact this species by altering the water flow of the Yangtze River. Little is currently known about the population genetic structure of the Chinese sturgeon. In this study, DNA sequence data were determined from the control region (D-loop) of the mitochondrial genome of adult sturgeons (n = 106) that were collected between 1995–2000. The molecular data were used to investigate genetic variation, effective female population size and population history of the Chinese sturgeon in the Yangtze River. Our results indicate that the reduction in abundance did not change genetic variation of the Chinese sturgeon, and that the population underwent an expansion in the past. AMOVA analysis indicated that 98.7% of the genetic variability occurred within each year's spawning populations, the year of collection had little influence on the diversity of annual temporary samples. The relative large effective female population size (N _ef) indicates that good potential exists for the recovery of this species in the future. Strikingly, the ratio of N _ef to the census female population size (N _f) is unusually high (0.77–0.93). This may be the result of a current bottleneck in the population of the Chinese sturgeon that is likely caused by human intervention. This revised version was published online in July 2006 with corrections to the Cover Date.     

Genetic population structure of the Fire-bellied toad <Emphasis Type="Italic">Bombina bombina</Emphasis> in an area of high population density: implications for conservation

In this study, we report the genetic population structure of the Fire-bellied toad Bombina bombina in Brandenburg (East Germany) in the context of conservation. We analysed 298 samples originating from 11 populations in Brandenburg using mitochondrial control region sequences and six polymorphic microsatellite loci. For comparison, we included one population each from Poland and Ukraine into our analysis. Within Brandenburg, we detected a moderate variability in the mitochondrial control region (19 different haplotypes) and at microsatellite loci (9–12 alleles per locus). These polymorphisms revealed a clear population structure among toads in Brandenburg, despite a relatively high overall population density and the moderate size of single populations (100–2000 individuals). The overall genetic population structure is consistent with a postglacial colonization from South East-Europe and a subsequent population expansion. Based on genetic connectivity, we infer Management Units (MUs) as targets for conservation. Our genetic survey identified MUs, within which human infrastructure is currently preventing any genetic exchange. We also detect an unintentional translocation from South East to North West Brandenburg, presumably in the course of fish stocking activities. Provided suitable conservation measures are taken, Brandenburg should continue to harbor large populations of this critically endangered species.     

High genetic diversity despite drastic bottleneck in a critically endangered,long‐lived seabird,the Mascarene Petrel Pseudobulweria aterrima

The Mascarene Petrel Pseudobulweria aterrima is a critically endangered seabird endemic to Reunion Island, with an extremely small population suffering several threats. Fifteen polymorphic microsatellite loci were isolated from this species to analyse genetic diversity, estimate contemporary effective population size, search for evidence of a population bottleneck and see whether results support the hypothesis that life history traits could preserve allelic diversity in small populations. Results from 22 individuals found grounded as a consequence of light pollution highlight a surprisingly high genetic diversity, an absence of inbreeding, a contemporary effective population size estimated at approximately 1211 individuals and a probable bottleneck around 10 000 generations ago. Additional studies on genetic diversity and structure from a larger number of samples are thus required to evaluate the evolutionary potential of this critically endangered species.     

RISK FACTORS AFFECTING THE VAQUITA (PHOCOENA SINUS)1

Despite the vaquita being commonly cited as one of the most endangered marine mammals in the world, there is still disagreement over which factors put the species at greatest risk of extinction. This lack of agreement hinders management decisions needed to reduce the risk to the species. To expedite decision-making we consider four major risk factors. Habitat alteration from reduced flow of the Colorado River does not currently appear to be a risk factor because productivity remains high in vaquita habitat. Pollutant loads are low and pose low to no risk. Reduced fitness from inbreeding depression and loss of genetic variability are unlikely to pose high risk currently, though risk will increase if vaquitas remain at low abundance over long periods of time. Mortality resulting from fisheries bycatch poses high risk. Thus, short term management should not be hindered by uncertainty in estimating the risk of these factors, and primary conservation efforts should be directed to wards immediate elimination of incidental fishery mortality.     

Genetic structure and gene flow among Komodo dragon populations inferredby microsatellite loci analysis

A general concern for the conservation of endangered species is the maintenance of genetic variation within populations, particularly when they become isolated and reduced in size. Estimates of gene flow and effective population size are therefore important for any conservation initiative directed to the long-term persistence of a species in its natural habitat. In the present study, 10 microsatellite loci were used to assess the level of genetic variability among populations of the Komodo dragon Varanus komodoensis. Effective population size was calculated and gene flow estimates were compared with palaeogeographic data in order to assess the degree of vulnerability of four island populations. Rinca and Flores, currently separated by an isthmus of about 200 m, retained a high level of genetic diversity and showed a high degree of genetic similarity, with gene flow values close to one migrant per generation. The island of Komodo showed by far the highest levels of genetic divergence, and its allelic distinctiveness was considered of great importance in the maintenance of genetic variability within the species. A lack of distinct alleles and low levels of gene flow and genetic variability were found for the small population of Gili Motang island, which was identified as vulnerable to stochastic threats. Our results are potentially important for both the short- and long-term management of the Komodo dragon, and are critical in view of future re-introduction or augmentation in areas where the species is now extinct or depleted.     

普通野生稻小种群的交配系统与遗传多样性

小种群的遗传动态是保育遗传学关注的核心问题之一,而种群遗传动态又与交配系统密切相关.普通野生稻(Oryza rufipogon Griff.)是具有重要经济价值的濒危物种,目前其种群规模都较小,研究其小种群交配系统与遗传变异性对普通野生稻的保护具有重要意义.运用7对SSR引物,对采自江西东乡普通野生稻小种群的36份种茎和其中20个家系共计601份子代进行了分析.结果显示:该种群的表观异交率为0.318,多位点法估计(MLTR)的多位点异交率为0.481;50%以上的子代共享亲本,非随机交配明显;东乡普通野生稻种群交配系统属于混合交配类型.比较亲本和子代种群的遗传变异性显示:子代种群比亲本种群遗传变异性更丰富;子代种群的杂合子不足与种群变小自交比例上升有关;而亲本种群杂合子过剩可能与杂合基因型的选择优势有关.这些结果说明创造条件扩大种群规模对普通野生稻的原生境保护显得尤为重要.     

Genome-wide analysis in endangered populations: a case study in Barbaresca sheep

Analysis of genomic data is becoming increasingly common in the livestock industry and the findings have been an invaluable resource for effective management of breeding programs in small and endangered populations. In this paper, with the goal of highlighting the potential of genomic analysis for small and endangered populations, genome-wide levels of linkage disequilibrium, measured as the squared correlation coefficient of allele frequencies at a pair of loci, effective population size, runs of homozygosity (ROH) and genetic diversity parameters, were estimated in Barbaresca sheep using Illumina OvineSNP50K array data. Moreover, the breed’s genetic structure and its relationship with other breeds were investigated. Levels of pairwise linkage disequilibrium decreased with increasing distance between single nucleotide polymorphisms. An average correlation coefficient <0.25 was found for markers located up to 50 kb apart. Therefore, these results support the need to use denser single nucleotide polymorphism panels for high power association mapping and genomic selection efficiency in future breeding programs. The estimate of past effective population size ranged from 747 animals 250 generations ago to 28 animals five generations ago, whereas the contemporary effective population size was 25 animals. A total of 637 ROH were identified, most of which were short (67%) and ranged from 1 to 10 Mb. The genetic analyses revealed that the Barbaresca breed tended to display lower variability than other Sicilian breeds. Recent inbreeding was evident, according to the ROH analysis. All the investigated parameters showed a comparatively narrow genetic base and indicated an endangered status for Barbaresca. Multidimensional scaling, model-based clustering, measurement of population differentiation, neighbor networks and haplotype sharing distinguished Barbaresca from other breeds, showed a low level of admixture with the other breeds considered in this study, and indicated clear genetic differences compared with other breeds. Attention should be given to the conservation of Barbaresca due to its critical conservation status. In this context, genomic information may have a crucial role in management of small and endangered populations.     

High mitochondrial and nuclear genetic diversity in one of the world’s most endangered seabirds,the Chatham Island Taiko (<Emphasis Type="Italic">Pterodroma magentae</Emphasis>)

Interpreting the levels of genetic diversity in organisms with diverse life and population histories can be difficult. The processes and mechanisms regulating this diversity are complex and still poorly understood. However, endangered species typically have low genetic variation as a consequence of the effects of genetic drift in small populations. In this study we examine genetic variation in the critically endangered Chatham Island Taiko (Tchaik, Pterodroma magentae), one of the world’s rarest seabirds. The Taiko has a very small population size of between 120 and 150 individuals, including just 8–15 breeding pairs. We report surprisingly high mitochondrial and nuclear genetic diversity in this critically endangered long-lived species. We hypothesise that the present Taiko population has retained a significant proportion of its past genetic diversity. However, it is also possible that undiscovered birds are breeding in unknown areas, which could increase the population size estimate. Importantly, from a conservation perspective, we show that the high level of variation is unlikely to be maintained in the future since chicks currently being born have only a limited number of the mitochondrial DNA haplotypes found in adults. Reduced genetic variation will mean that our ability to infer past events and the population history of Taiko using genetics could soon be lost and the power to determine, for example, parentage and other close order relationships will be diminished. Therefore, the maintenance of genetic diversity in future generations is an important consideration for conservation management of the Taiko.