Welcome back Janolidae and Antiopella: Improving the understanding of Janolidae and Madrellidae (Cladobranchia,Heterobranchia) with description of four new species

Proctonotidae and Madrellidae are families that belong to the suborder Cladobranchia. Historically, both have been the subjects of taxonomic confusion. Thus, Proctonotidae Gray, 1853, was subsequently named as Zephyrinidae Iredale and O'Donoghue, 1923 and Janolidae Pruvot‐Fol, 1933, but currently both are considered as synonyms of Proctonotidae. On the other hand, Alder and Hancock (1864) erected the genus Madrella in Proctonotidae. Here, we completed a detailed morphological and molecular study of four apparently undescribed species of Madrellidae and Proctonotidae from the Indo‐Pacific. We performed a maximum likelihood and Bayesian inference phylogenetic analyses using two mitochondrial and one nuclear genes to improve the understanding of the families. Prompted by our results, Janolidae is removed from synonymy with Proctonotidae. Within Janolidae, there are two well‐supported clades. One includes species with smooth cerata that are found in the Atlantic and eastern Pacific Oceans. The taxa in this clade include the type species of Antiopella and several other species. We resurrect Antiopella as the valid name for this clade. The sister clade to Antiopella includes a variety of taxa with species that have been traditionally included in Janolus Bergh, 1884 and Bonisa Gosliner, 1981. Further systematic revision requires more comprehensive taxon sampling. The new species discovered have clear morphological differences and strong molecular support. They include Madrella amphora Pola and Gosliner sp. nov. , Janolus tricellariodes Pola and Gosliner sp. nov. , Janolus flavoanulatus Pola and Gosliner sp. nov., and Janolus incrustans Pola and Gosliner sp. nov.     

Comparative ecology of subtidal actiniarians from the coasts of California and the Gulf of Maine,USA

Shallow subtidal populations of sea anemones occupying hard substrates along the California (Pacific) and Gulf of Maine (Atlantic) coasts of the USA are compared. The diversity of anemones in the southern Gulf of Maine to 35 m is low (4 species) in contrast to similar habitats in California (at least 11 species), but parallel patterns of individual size, distribution and predation impacts occur. Water motion influences depth distribution and size, while predation affects size, population structure and habitat selection. The nudibranch Aeolidia papillosa exerts a similar pressure on population structure in some anemone species in both areas as a size selective predator. The seastar Dermasterias imbricata appears to magnify the selective pressure for large size in the eastern Pacific coastal zone. Interspecific aggression of anemones determines some distribution patterns in areas of overlap.     

South American electric knifefishes of the genus Archolaemus (Ostariophysi,Gymnotiformes): undetected diversity in a clade of rheophiles

Neotropical electric knifefishes of the family Sternopygidae previously considered to represent a single relatively geographically widespread and morphologically variable species, Archolaemus blax, were analysed and found to represent a complex of five species, four of which are new to science. A fifth undescribed species from the Rio São Francisco basin outside the previous known range of the genus was identified. Recognized species of Archolaemus are: A. blax, previously thought to occur in the Rio Araguari, Rio Branco, Rio Tapajós, Rio Tocantins, and Rio Xingu, but which instead proved to be endemic to the Rio Tocantins; Archolaemus ferreirai sp. nov. from the Rio Mucajaí and Rio Uraricoera in the north‐eastern portions of the Amazon basin; Archolaemus janeae sp. nov. of the Rio Xingu and the upper Rio Tapajós, both southern tributaries of the mainstream Amazon; Archolaemus luciae sp. nov. of the Rio Trombetas, Rio Jari, and Rio Tapajós basins of the eastern Amazon, and the independent Rio Araguari draining into the Atlantic Ocean north of the mouth of the Amazon; Archolaemus orientalis sp. nov. of the São Francisco basin in eastern Brazil; and Archolaemus santosi sp. nov. of the Rio Jamari in the south‐western portion of the Amazon basin. The phylogenetic placements of Archolaemus and the recently described genus Japigny relative to the other members of the Eigenmanninae are discussed. A series of synapomorphies for Archolaemus are proposed and a hypothesis of the relationships within that genus is advanced. Rheophily of all members of Archolaemus is discussed, with the genus found to be the most specious clade within the Gymnotiformes living primarily in high‐energy settings. The reported anterior projection of the dentary teeth in A. blax was found to be a consequence of postmortem displacement.     

On Sea Turtle‐associated Craspedostauros (Bacillariophyta), with Description of Three Novel Species

The current study focuses on four species from the primarily marine diatom genus Craspedostauros that were observed growing attached to numerous sea turtles and sea turtle‐associated barnacles from Croatia and South Africa. Three of the examined taxa, C. danayanus sp. nov., C. legouvelloanus sp. nov., and C. macewanii sp. nov., are described based on morphological and, whenever possible, molecular characteristics. The new taxa exhibit characters not previously observed in other members of the genus, such as the presence of more than two rows of cribrate areolae on the girdle bands, shallow perforated septa, and a complete reduction of the stauros. The fourth species, C. alatus, itself recently described from museum sea turtle specimens, is reported for the first time from loggerhead sea turtles rescued in Europe. A 3‐gene phylogenetic analysis including DNA sequence data for three sea turtle‐associated Craspedostauros species and other marine and epizoic diatom taxa indicated that Craspedostauros is monophyletic and sister to Achnanthes. This study, being based on a large number of samples and animal specimens analyzed and using different preservation and processing methods, provides new insights into the ecology and biogeography of the genus and sheds light on the level of intimacy and permanency in the host–epibiont interaction within the epizoic Craspedostauros species.     

Asiaontsira gen. nov., a new tropical genus of the subfamily Doryctinae (Hymenoptera: Braconidae) from Vietnam and South‐East China

A new genus, Asiaontsira gen. nov., and two new species, A. cucphuongi sp. nov. (type species) and A. cantonica sp. nov., are described from tropical and subtropical areas of South‐East China and North Vietnam. This genus is compared to the closely related Australian Ontsirospathius Belokobylskij, Iqbal and Austin, 2004 as well as the similar and almost cosmopolitan genus Ontsira Cameron, 1900. A key to both species of Asiaontsira gen. nov. is provided.     

New representatives of the genus Ancorabolina George, 2006 (Copepoda,Harpacticoida, Ancorabolidae) including remarks on ancorabolid phylogeny

Four new species of Ancorabolina George, 2006 (Copepoda: Harpacticoida: Ancorabolidae) are described: Ancorabolina belgicae sp. nov. (from the Porcupine Seabight, north‐east Atlantic Ocean), Ancorabolina anaximenesi sp. nov. and Ancorabolina galeata sp. nov. (both from Anaximenes Mountain, eastern Mediterranean Sea), and Ancorabolina divasecunda sp. nov. (from Cape and Guinea Basins, south‐east Atlantic Ocean). Furthermore, the generic diagnosis for Ancorabolina is provided and the position of the taxon within Ancorabolidae is discussed. The characters originally employed to allocate Ancorabolina to the subfamily Ancorabolinae Sars, 1909, are critically evaluated and two true autapomorphies for a monophyletic Ancorabolinae (including Ancorabolina) are recognized. Two autapomorphies supporting Ancorabolina are proposed: (1) cephalothorax posteriorly with pair of ventrolateral cuticular processes turned backwards and (2) loss of the third setal element subapically on the antennary endopod. The urgent need for a phylogenetic re‐evaluation of the paraphyletic subfamily Laophontodinae Lang, 1944 is stressed and evidenced by three characters widespread in this subfamily but also present in Ancorabolina. This may be an indication of a closer relationship of Ancorabolina with certain members of Laophontodinae. © 2010 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 158 , 16–55.     

Taxonomy of family Plakinidae (Porifera: Homoscleromorpha) from eastern Pacific coral reefs,through morphology and cox1 and cob mtDNA data

Sponges belonging to the class Homoscleromorpha have become a pivotal group to help understand early metazoan evolution. However, their complex systematics and cryptic habitat (e.g. dead coral, or under/amongst coral rubble or rock), hinders the recognition and classification of species. An extensive study carried out in coral reefs from the Mexican Pacific coast, Revillagigedo and Clipperton Islands, yielded 21 specimens and five species of Plakinidae: Plakortis albicans, Plakinastrella clippertonensis, P lakina muricyae sp. nov. , P lakina paradilopha sp. nov. , and P lakortis clarionensis sp. nov. Fragments of cytochrome c oxidase subunit I (cox1) and cytochrome b (cob) mtDNA were sequenced to generate DNA‐barcoding of some species and to determine their phylogenetic relationships with other homosclermorphs. Molecular and morphological data placed Plakina muricyae sp. nov. together with the morphologically related species Plakina monolopha (Plakina monolopha‐complex), whereas Plakina paradilopha sp. nov. seems to belong to the Plakina dilopha complex. According to spicule morphology and size, Plakortis albicans had been considered to be in the Plakortis simplex‐complex. However, this was not supported by our molecular data and Plakortis albicans clustered with Plakinastrella sp. here. This is the first time that the standard cox1 ‘barcoding fragment’ has been analysed for the systematics of Plakinidae, which showed to Plakina as a monophyletic group, which is congruent with the morphological hypothesis. The genus Plakina is here recorded for first time from Mexican Pacific waters. A taxonomic key for Homoscleromorpha species from the eastern Pacific region is also included. © 2014 The Linnean Society of London     

The true identity of Obama (Platyhelminthes: Geoplanidae) flatworm spreading across Europe

Since 2008 there have been many records in Europe (British Isles, Spain, France, Italy) of a large terrestrial planarian morphologically very similar to the Brazilian species Obama marmorata. Sequences of mitochondrial (Cox1) and nuclear (18S, 28S, ITS‐1 and EF) genes from European specimens and some from Brazil indicate that they belong to a species different from that of other specimens also collected in Brazil. Moreover, the phylogenetic results show that they are not sister‐species. Histological sections of both Brazilian and European specimens reveal subtle morphological differences between the two species. Obama marmorata is confined to Brazil, and the second, herein described new species, O bama nungara sp. nov. , is found in Brazil and Europe. These cryptic species may be syntopic in areas in Brazil. The new species occurs in human‐modified environments both in Brazil and in Europe. We also conclude that the specimens from Spain and Argentina identified previously as Obama marmorata belong to the new species.     

A molecular evaluation of the Liagoraceae sensu lato (Nemaliales,Rhodophyta) in Bermuda including Liagora nesophila sp. nov. and Yamadaella grassyi sp. nov.

We have undertaken a comprehensive, molecular‐assisted alpha‐taxonomic examination of the rhodophyte family Liagoraceae sensu lato, a group that has not previously been targeted for molecular studies in the western Atlantic. Sequence data from three molecular markers indicate that in Bermuda alone there are 10 species in nine different genera. These include the addition of three genera to the flora — Hommersandiophycus, Trichogloeopsis, and Yamadaella. Liagora pectinata, a species with a type locality in Bermuda, is phylogenetically allied with Indo‐Pacific species of Hommersandiophycus, and the species historically reported as L. ceranoides for the islands is morphologically and genetically distinct from that taxon, and is herein described as L. nesophila sp. nov. Molecular sequence data have also uncovered the Indo‐Pacific L. mannarensis in Bermuda, a long‐distance new western Atlantic record. DNA sequences of Trichogloeopsis pedicellata from the type locality (Bahamas) match with local specimens demonstrating its presence in Bermuda. We described Yamadaella grassyi sp. nov. from Bermuda, a species phylogenetically and morphologically distinct from the generitype, Y. caenomyce of the Indo‐Pacific. Our data also indicated a single species each of Ganonema, Gloiocallis, Helminthocladia, Titanophycus, and Trichogloea in the flora.     

Morphology and phylogenetic interpretation of a new Cambrian edrioasteroid (Echinodermata) from Spain

Abstract: The edrioasteroid, Aragocystites belli gen. nov. sp. nov. from the middle Cambrian Murero Formation of Spain, is described based on a small number of very well‐preserved specimens. Important anatomical characteristics include star‐shaped and pseudoclavate theca, rare or absent epispires, well‐developed interradially positioned oral plates and several unorganized cover plates associated with each widely exposed flooring plate. A phylogenetic analysis including several Cambro–Ordovician species shows it is more derived than Stromatocystites and Totiglobus but is a sister group to a clade comprising Cambraster and Edriodiscus. Ontogenetic observations based on juveniles of 5 mm in diameter suggest that this species changed thecal shape markedly during growth. A. belli gen. nov. sp. nov. probably lived in quiet environments where it attached directly to the sea floor on stabilized substrates.     

Diversity,Ecology, Biogeography,and Evolution of the Prevalent Brown Algal Genus Lobophora in the Greater Caribbean Sea,Including the Description of Five New Species1

Distributed in tropical and warm-temperate waters worldwide, Lobophora species are found across the Greater Caribbean (i.e., Caribbean sensu stricto, Gulf of Mexico, Florida, the Bahamas, and Bermuda). We presently discuss the diversity, ecology, biogeography, and evolution of the Greater Caribbean Lobophora species based on previous studies and an extensive number of samples collected across the eastern, southern, and to a lesser extent western Caribbean. A total of 18 Lobophora species are now documented from the Greater Caribbean, of which five are newly described (L. agardhii sp. nov., L. dickiei sp. nov., L. lamourouxii sp. nov., L. richardii sp. nov., and L. setchellii sp. nov.). Within the Greater Caribbean, the eastern Caribbean and the Central Province are the most diverse ecoregion and province (16 spp.), respectively. Observed distribution patterns indicate that Lobophora species from the Greater Caribbean have climate affinities (i.e., warm-temperate vs. tropical affinities). In total, 11 Lobophora species exclusively occur in the Greater Caribbean; six are present in the western Atlantic; two in the Indo-Pacific; and one in the eastern Pacific. Biogeographic analyses support that no speciation occurred across the Isthmus of Panama, and that the Greater Caribbean acted as a recipient region for species from the Indo-Pacific and as a region of diversification as well as a donor region to the North-eastern Atlantic. The Greater Caribbean is not an evolutionary dead end for Lobophora, but instead generates and exports diversity. Present results illustrate how sampling based on DNA identification is reshaping biogeographic patterns, as we know them.     

Molecular Phylogeny of the Parasitic Dinoflagellate Chytriodinium within the Gymnodinium Clade (Gymnodiniales,Dinophyceae)

The dinoflagellate genus Chytriodinium, an ectoparasite of copepod eggs, is reported for the first time in the North and South Atlantic Oceans. We provide the first large subunit rDNA (LSU rDNA) and Internal Transcribed Spacer 1 (ITS1) sequences, which were identical in both hemispheres for the Atlantic Chytriodinium sp. The first complete small subunit ribosomal DNA (SSU rDNA) of the Atlantic Chytriodinium sp. suggests that the specimens belong to an undescribed species. This is the first evidence of the split of the Gymnodinium clade: one for the parasitic forms of Chytriodiniaceae (Chytriodinium, Dissodinium), and other clade for the free‐living species.     

The question of cosmopolitanism in the deep-sea ostracod fauna: the example of the genus Pedicythere

Deep-sea Pedicythere species which had been earlier considered as pan-abyssal in distribution are shown to be composite species including similar, but separate species in the Pacific, Indian and Atlantic oceans. Morphology and distribution of Pedicythere are analysed. A key to well-described Cenozoic species and forms in open nomenclature which are referred to Pedicythere is presented, together with an annotated checklist of species. Five new species of Pedicythere are described from the South China Sea: P. hirundo sp. nov., P. gibbera sp. nov., P. dentata sp. nov., P. arator sp. nov. and P. nivea sp. nov.     

Renewed sampling of inland aquatic habitats in southern Africa yields two novel freshwater crab species (Decapoda: Potamonautidae: Potamonautes)

A recent survey of the freshwater streams of the Mecula and Yao mountains in the Niassa province of Mozambique resulted in the discovery of a new freshwater crab species. This species is genetically and morphologically distinct from described species from Mozambique or its neighbouring countries, and is described as P otamonautes bellarussus sp. nov. In addition, a new semi‐terrestrial burrowing freshwater crab P otamonautes flavusjo sp. nov. from the Highveld of the Mpumalanga province in South Africa is described based on unique genetic and morphological characters. The phylogenetic affinities of the two new species in relation to the described eastern and southern African Potamonautes species is determined and the biogeographic implications are discussed. © 2014 The Linnean Society of London     

Genetic isolation within the malaria mosquito Anopheles melas

Anopheles melas is a brackish water–breeding member of the Anopheles gambiae complex that is distributed along the coast of West Africa and is a major malaria vector within its range. Because little is known about the population structure of this species, we analysed 15 microsatellite markers and 1161 bp of mtDNA in 11 A. melas populations collected throughout its range. Compared with its sibling species A. gambiae, A. melas populations have a high level of genetic differentiation between them, representing its patchy distribution due to its fragmented larval habitat that is associated with mangroves and salt marsh grass. Populations clustered into three distinct groups representing Western Africa, Southern Africa and Bioko Island populations that appear to be mostly isolated. Fixed differences in the mtDNA are present between all three clusters, and a Bayesian clustering analysis of the microsatellite data found no evidence for migration from mainland to Bioko Island populations, and little migration was evident between the Southern to the Western cluster. Surprisingly, mtDNA divergence between the three A. melas clusters is on par with levels of divergence between other species of the A. gambiae complex, and no support for monophyly was observed in a maximum‐likelihood phylogenetic analysis. Finally, an approximate Bayesian analysis of microsatellite data indicates that Bioko Island A. melas populations were connected to the mainland populations in the past, but became isolated, presumably when sea levels rose after the last glaciation period (≥10 000–11 000 bp ). This study has exposed species‐level genetic divergence within A. melas and also has implications for control of this malaria vector.     

Study of the Rotatoria‐Fauna of the Littoral of the Rio Branco,South of Boa Vista,Northern Brazil

From a study of the permanent shallow water in the savanna near Boa Vista, Brazil, a littoral sample was brought back by Dr. G.‐O. Brandorff ; Ahrensburg, which he gave me to examine. The analysis of the material, about 50 ml, showed 149 identifiable species as well as some preservative artifacts. Six species were hitherto unknown to that area. They were identified as the following: Cephalodella brandorffi nov. sp., Dicranophorus difflugarium (Penard , 1924), Eothinia triphea (Harring and Myers , 1924), Lecane bulla papillosa nov. ssp., Macrochaetus paggiensae nov. sp., Notommata falcinella (Harring and Myers , 1922), and Habrotrocha pusilla pusilla (Bryce , 1893).     

Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view

Asian wild rice (Oryza rufipogon) that ranges widely across the eastern and southern part of Asia is recognized as the direct ancestor of cultivated Asian rice (O. sativa). Studies of the geographic structure of O. rufipogon, based on chloroplast and low‐copy nuclear markers, reveal a possible phylogeographic signal of subdivision in O. rufipogon. However, this signal of geographic differentiation is not consistently observed among different markers and studies, with often conflicting results. To more precisely characterize the phylogeography of O. rufipogon populations, a genome‐wide survey of unlinked markers, intensively sampled from across the entire range of O. rufipogon is critical. In this study, we surveyed sequence variation at 42 genome‐wide sequence tagged sites (STS) in 108 O. rufipogon accessions from throughout the native range of the species. Using Bayesian clustering, principal component analysis and amova , we conclude that there are two genetically distinct O. rufipogon groups, Ruf‐I and Ruf‐II. The two groups exhibit a clinal variation pattern generally from north‐east to south‐west. Different from many earlier studies, Ruf‐I, which is found mainly in China and the Indochinese Peninsula, shows genetic similarity with one major cultivated rice variety, O. satvia indica, whereas Ruf‐II, mainly from South Asia and the Indochinese Peninsula, is not found to be closely related to cultivated rice varieties. The other major cultivated rice variety, O. sativa japonica, is not found to be similar to either O. rufipogon groups. Our results support the hypothesis of a single origin of the domesticated O. sativa in China. The possible role of palaeoclimate, introgression and migration–drift balance in creating this clinal variation pattern is also discussed.