Climatic and biogeographical associations of southern African dung beetles (Coleoptera: Scarabaeidae s. str.)

Climatic and biogeographical associations of southern African dung beetles (Scarabaeinae, Coprinae) were analysed from a collection amassed between 1971 and 1986. Endemism to Africa south of 15°S was much greater in southwesterly climates (winter rainfall, bimodal spring/autumn rainfall, arid late summer rainfall) than to the north‐east in the moist, mid‐summer rainfall region. Major biogeographical groups centred to the south‐west comprised predominantly southern African endemics, Western/Eastern Cape coast, Karoo, Karoo/Namib, northern Namibia and the south‐western Kalahari. Biogeographical groups centred on the south‐eastern highlands and the subtropical east coast (mid‐summer rainfall) also comprised predominantly southern African endemics. All other major groups centred to the north‐east in the mid‐summer rainfall region comprised predominantly species with widespread tropical biogeographical affiliations, pan‐southern Africa but centred in the east, pan‐mid‐summer rainfall region, eastern mid‐summer rainfall region, tropical east Zimbabwe/central Moçambique, subtropical/tropical game reserves (non‐ruminant dung specialists). There were cross‐climatic differences in taxonomic composition of the fauna. Within the winter rainfall region, percentage species composition of Scarabaeinae was greater whereas that of the coprine tribe, Onthophagini, was lower than within the other three climatic regions. Percentage species richness of most other tribes of Coprinae differed little between most climates but that of Scarabaeinae declined from west to east (Canthonini, Scarabaeini), east to west (Sisyphini) or to either side of the late summer rainfall region (Gymnopleurini).     

Floristic biodiversity and history of African arid regions

The phytochorological patterns of the arid flora of Africa are discussed on various levels. The arid regions of the African continent are linked by a large number of taxa with disjunct distribution. Analysis of these disjunct patterns supports the hypothesis of fragmentation of a once continuous arid belt running from the Namib desert region to the Western Sahara via East Africa. The flora of the arid regions of Southern Africa shows regular patterns, e.g. identical fragmentation of distribution areas of several taxa on an infrafamilial or infrageneric level, allowing formulation of a hypothesis concerning the sequence of differentiation steps during formation of the floras. Very interesting patterns can be attributed to effects of the last glaciation. For example, disjunct distribution patterns in the Namib region can be interpreted as a result of survival of palaeotropical taxa in warm refuge areas during the last glaciation.     

Reconstruction of the biogeographical history of Malesherbiaceae

Malesherbiaceae are xerophytic plants of Chile, Peru, and Argentina. The 24 species of the only genus,Malesherbia, live in a variety of arid habitats in the Pacific coastal desert and adjacent Andes of Peru, Chile, and neighboring Argentina. Taxa with distributions in both Peru and Chile are rare; for this reason the family provides an excellent case study for the biogeography of this region of western South America. Phylogenetic analysis of ITS sequence data using Turneraceae as an outgroup shows a correlation between the phylogeny and the distribution of Malesherbiaceae. The origin of the family is placed in the late Miocene to early Pliocene, when the region became permanently arid. The five major clades of the family likely diverged during the Pliocene. A single clade consisting of species native to Peru and the Atacama Desert indicates that the family was introduced to Peru once. Most modern species appear to have evolved in response to Pleistocene climatic fluctuations.

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Resumen  Las Malesherbiaceae son plantas xerófitas de Chile, el Perú, y Argentina. Las 24 especies del genero único,Malesherbia, viven en una variedad de hábitats en el desierto costero del Pacífico y en la zona andina vecina en el Perú, Chile, y Argentina. Los taxones con distribuciones tanto en el Perú como en Chile son raros; por eso la familia es un buen ejemplo para el estudio de la biogeografía de esta región del oeste de América del Sur. El análisis filogenético de datos de secuencias de ITS usando Turneraceae como un grupo extemo muestra una correlación entre la filogenia y la distribución de Malesherbiaceae. La familia se originó en el Mioceno tardío o Plioceno temprano, cuando la región se volvió permanentemente árida. Los cinco clados mayores de la familia probablemente divergieron en el Plioceno. Un solo clado que tiene especies nativas a Perú y el Desierto de Atacama indica que la familia llegó al Perú una vez. La mayoría de las especies modernas probablemente evolucionaron en respuesta a las fluctuaciones climáticas en el Pleistoceno.

     

European Miocene hominids and the origin of the African ape and human clade

In 1871, Darwin famously opined, "In each great region of the world the living mammals are closely related to the extinct species of the same region. It is therefore probable that Africa was formerly inhabited by extinct apes closely allied to the gorilla and chimpanzee; and as these two species are now man's nearest allies, it is somewhat more probable that our early progenitors lived on the African continent than elsewhere." Although this quote is frequently recalled today, Darwin's next line is rarely acknowledged: "But it is useless to speculate on this subject, for an ape nearly as large as a man, namely the Dryopithecus of Lartet, which was closely allied to the anthropomorphous Hylobates, existed in Europe during the Upper Miocene period; and since so remote a period the earth has certainly undergone many great revolutions, and there has been ample time for migration on the largest scale."     

Dental perspectives on the population history of Southeast Asia

This article uses metric and nonmetric dental data to test the "two-layer" or immigration hypothesis whereby Southeast Asia was initially occupied by an "Australo-Melanesian" population that later underwent substantial genetic admixture with East Asian immigrants associated with the spread of agriculture from the Neolithic period onwards. We examined teeth from 4,002 individuals comprising 42 prehistoric and historic samples from East Asia, Southeast Asia, Australia, and Melanesia. For the odontometric analysis, dental size proportions were compared using factor analysis and Q-mode correlation coefficients, and overall tooth size was also compared between population samples. Nonmetric population affinities were estimated by Smith's distances, using the frequencies of 16 tooth traits. The results of both the metric and nonmetric analyses demonstrate close affinities between recent Australo-Melanesian samples and samples representing early Southeast Asia, such as the Early to Middle Holocene series from Vietnam, Malaysia, and Flores. In contrast, the dental characteristics of most modern Southeast Asians exhibit a mixture of traits associated with East Asians and Australo-Melanesians, suggesting that these populations were genetically influenced by immigrants from East Asia. East Asian metric and/or nonmetric traits are also found in some prehistoric samples from Southeast Asia such as Ban Kao (Thailand), implying that immigration probably began in the early Neolithic. Much clearer influence of East Asian immigration was found in Early Metal Age Vietnamese and Sulawesi samples. Although the results of this study are consistent with the immigration hypothesis, analysis of additional Neolithic samples is needed to determine the exact timing of population dispersals into Southeast Asia.     

Technological complexity and the global dispersal of modern humans

Anatomically modern humans (Homo sapiens) dispersed out of Africa roughly 120,000 years ago and again after 75,000 years ago. The early dispersal was geographically restricted to the Arabian Peninsula, Levant, and possibly parts of southern Asia. The later dispersal was ultimately global in scope, including areas not previously occupied by Homo. One explanation for the contrast between the two out‐of‐Africa dispersals is that the modern humans who expanded into Eurasia 120,000 years ago lacked the functionally and structurally complex technology of recent hunter‐gatherers. This technology, which includes, for example, mechanical projectiles, snares and traps, and sewn clothing, provides not only expanded dietary breadth and increased rates of foraging efficiency and success in places where plant and animal productivity is low, but protection from cold weather in places where winter temperatures are low. The absence of complex technology before 75,000 years ago also may explain why modern humans in the Levant did not develop sedentary settlements and agriculture 120,000 years ago (i.e., during the Last Interglacial).     

Osseous inner ear structures and hearing in early marsupials and placentals

Based on the internal anatomy of petrosal bones as shown in radiographs and scanning electron microscopy, the inner ear structures of Late Cretaceous marsupials and placentals (about 65 Myr ago) from the Bug Creek Anthills locality of Montana, USA, are described. The inner ears of Late Cretaceous marsupials and placentals are similar to each other in having the following tribosphenic therian synapomorphies: a fully coiled cochlea, primary and secondary osseous spiral laminae, the perilymphatic recess merging with the scala tympani of the cochlea, an aqueductus cochleae, a true fenestra cochleae, a radial pattern of the cochlear nerve and an elongate basilar membrane extending to the region between the fenestra vestibuli and fenestra cochleae. The inner ear structures of living therians differ from those of their Late Cretaceous relatives mainly in having a greater number of spiral turns of the cochlea and a longer basilar membrane. Functionally, a coiled cochlea not only permits the development of an elongate basilar membrane within a restricted space in the skull but also allows a centralized nerve system to innervate the elongate basilar membrane. Qualitative and quantitative analyses show that, with a typical therian inner ear, Late Cretaceous marsupials and placentals were probably capable of high-frequency hearing.     

On the genetic interrelationships of South African Negroes

This study addresses the comparative genetic interrelationships between South African Negro groups. For this the genetic distances between seven ethnically defined Negro subsamples (total of 998 individuals) based on 24 genetic loci/polymorphisms are calculated by applying standard distance formulae. These computations offer an opportunity to evaluate the different polymorphisms in terms of their effects on the genetic distances. The genetic interrelationships thus computed are illustrated by way of dendrograms and are discussed in terms of their comparative significance. It follows from the findings that the Ndebele, Northern Sotho (Pedi), and Tswana form a closely related subcluster and that the Zulu and Swazi as well as the Venda and Shangana-Tsonga form two additional, more distant, subclusters. These results are discussed and tentatively interpreted against the background of the reported Khoisan admixture of the populations concerned as well as their ethnological history. The data are also compared to those derived from metric and dermatoglyphic studies. It is concluded that whereas there is some agreement between these categories of variation (genetic, metric, and dermatoglyphic) as far as the comparative evaluation of South African Negro groups is concerned, there also are discrepancies. These conclusions need to be explained in terms of evolutionary mechanisms (such as historic origins, hybridization, natural selection, and genetic drift) in order to obtain a more consistent and comprehensive comparative picture of the physical anthropology of southern African populations.     

Hypoxia and life‐history traits in a eurytopic African cichlid

This study quantified variation in key life‐history traits of the widespread African mouth‐brooding cichlid Pseudocrenilabrus multicolor victoriae. Egg size, number, batch reproductive effort, size at maturity and brooding efficiency were compared among field populations across a wide range of dissolved oxygen (DO) concentrations from extreme hypoxia to normoxia. In the laboratory, a similar suite of characters was quantified in F1 of low‐ and high‐DO origin reared under low or high DO. In general, females from low‐DO habitats and females reared under low DO were characterized by a smaller size at maturity and no difference in batch reproductive effort when compared with females from high‐DO habitats or females reared under normoxia. A trade‐off between egg size and number was evident in the field and in the laboratory‐rearing experiment, but the direction of the trade‐off differed. Egg size was negatively correlated with egg number across field populations; females collected from low‐DO sites generally had more, smaller eggs relative to females from high‐DO sites. In the laboratory‐rearing experiment, F1 females of high‐DO origin produced larger, fewer eggs than F1 females of low‐DO origin, lending support to the field results and suggesting a heritable component to these traits. There was also an element of developmental plasticity, F1 females raised under low DO produced larger, fewer eggs compared with F1 females raised under high DO (regardless of population) suggesting that DO may interact with other variables to determine egg size in the field.     

Demography and life history of a viviparous Central African caecilian amphibian

Many tropical ecosystems support exceptional levels of amphibian diversity, but in contrast to their temperate counterparts, many aspects of their biology are little studied and poorly understood. Demographic studies give valuable insights into the age structure and life histories of amphibian populations, thus they are of high importance in making accurate and precise conservation assessments in the light of current global amphibian declines. We analysed age structure and growth in a population of the viviparous caecilian Geotrypetes seraphini , a caecilian amphibian from Mount Cameroon, Central Africa, by using skeletochronology. We detected lines of arrested growth (LAG) in mid-body vertebrae and interpreted them as indicators of a seasonal growth pattern. We expect that LAG are materialized at a rate of one per year. In our sample male reach sexual maturity at an early age (age class 0+), whereas females mature later (age class 1+). Maximum longevity in our sample was estimated at 4+ years. Body size (total length) was significantly smaller in males than in females. Our study shows that skeletochronology is a highly suitable method to determine caecilian growth and age. Caecilian amphibians show a high diversity of reproductive modes including unusual brood care and parental investment strategies. In order to deepen our understanding of their ecology and evolution, many more demographic studies on other species and lineages are needed.     

Stability and change in Tethyan planktic foraminifera across the Paleocene–Eocene transition

Examination of planktic foraminifera in the Tethys basin during the Paleocene–Eocene transition reveals two stasis intervals that are separated by a major saltation event coincident with the P–E short-term perturbation in global climate and oceanography. Changes occurred at many spatial and temporal scales as well as many taxonomic and ecologic hierarchical levels, though with various rates and magnitudes. The stasis intervals are marked by slow changes at the species level and account for 50% of the observed first and last appearances during a 2.5 Myr interval. The saltation event is marked by rapid changes at the species and morpho-guild levels and accounts for the remaining 50% of first and last appearances during an interval of about 100–200 kyr. Despite these changes, many taxonomic and ecologic units, such as the depth assemblages and genera, and faunal parameters, such as species richness and turnover rates, are stable with respect to the P–E perturbation. This coexistence of change and stability marks the crisis of Tethyan planktic foraminifera across the P–E transition and reveals the possible dynamics of ecological evolution.     

A biogeographical regionalization of Angolan mammals

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Insights into the biogeographical history of the Lower Guinea Forest Domain: evidence for the role of refugia in the intraspecific differentiation of Aucoumea klaineana

Determining the biogeographical histories of rainforests is central to our understanding of the present distribution of tropical biodiversity. Ice age fragmentation of central African rainforests strongly influenced species distributions. Elevated areas characterized by higher species richness and endemism have been postulated to be Pleistocene forest refugia. However, it is often difficult to separate the effects of history and of present-day ecological conditions on diversity patterns at the interspecific level. Intraspecific genetic variation could yield new insights into history, because refugia hypotheses predict patterns not expected on the basis of contemporary environmental dynamics. Here, we test geographically explicit hypotheses of vicariance associated with the presence of putative refugia and provide clues about their location. We intensively sampled populations of Aucoumea klaineana, a forest tree sensitive to forest fragmentation, throughout its geographical range. Characterizing variation at 10 nuclear microsatellite loci, we were able to obtain phylogeographic data of unprecedented detail for this region. Using Bayesian clustering approaches, we demonstrated the presence of four differentiated genetic units. Their distribution matched that of forest refugia postulated from patterns of species richness and endemism. Our data also show differences in diversity dynamics at leading and trailing edges of the species' shifting distribution. Our results confirm predictions based on refugia hypotheses and cannot be explained on the basis of present-day ecological conditions.     

Diversification and biogeographical history of Neotropical plethodontid salamanders

The Neotropical bolitoglossine salamanders represent an impressive adaptive radiation, comprising roughly 40% of global salamander species diversity. Despite decades of morphological studies and molecular work, a robust multilocus phylogenetic hypothesis based on DNA sequence data is lacking for the group. We estimated species trees based on multilocus nuclear and mitochondrial data for all major lineages within the bolitoglossines, and used our new phylogenetic hypothesis to test traditional biogeographical scenarios and hypotheses of morphological evolution in the group. In contrast to previous phylogenies, our results place all Central American endemic genera in a single clade and suggest that Central America played a critical role in the early biogeographical history of the group. The large, predominantly Mexican genus Pseudoeurycea is paraphyletic, and analyses of the nuclear data place two lineages of Pseudoeurycea as the sister group of Bolitoglossa. Our phylogeny reveals extensive homoplasy in morphological characters, which may be the result of truncation or alteration of a shared developmental trajectory. We used our phylogenetic results to revise the taxonomy of the genus Pseudoeurycea. © 2015 The Linnean Society of London     

First report of the giant snake Gigantophis (Madtsoiidae) from the Paleocene of Pakistan: Paleobiogeographic implications

We report here the discovery of madtsoiid snake remains from the early Paleocene Khadro Formation (Ranikot Group, Sindh, Southern Pakistan). These specimens consist of vertebrae and are referred to Gigantophis. This is the first report of Gigantophis from outside of Africa. The problem of the generic distinction between Gigantophis and Madtsoia is stressed. The specimens from Pakistan slightly differ from the single species (G. garstini) referred to the genus Gigantophis, but the available material does not allow further considerations and the fossil is referred to as Gigantophis sp. However, Gigantophis sp. from the Khadro Formation is more closely related to G. garstini, that is known only from the middle and late Eocene of northern Africa, than to any other species, thus suggesting dispersal between these two areas during the Paleocene or earlier. These results are consistent with the hypothesis of intermittent dispersals between the Indo-Pakistan Plate and Africa suggested by other fossil evidences.