Plant Ca<Superscript>2+</Superscript>-ATPases

Plant calcium pumps, similarly to animal Ca²⁺ pumps, belong to the superfamily of P-type ATPase comprising also the plasma membrane H⁺-ATPase of fungi and plants, Na⁺/K⁺ ATPase of animals and H⁺/K⁺ ATPase of mammalian gastric mucosa. According to their sensitivity to calmodulin the plant Ca²⁺-ATPases have been divided into two subgroups: type IIA (homologues of animal SERCA) and type IIB (homologues of animal PMCA). Regardless of the similarities in a protein sequence, the plant Ca²⁺ pumps differ from those in animals in their cellular localization, structure and sensitivity to inhibitors. Genomic investigations revealed multiplicity of plant Ca²⁺-ATPases; they are present not only in the plasma membranes and ER but also in membranes of most of the cell compartments, such as vacuole, plastids, nucleus or Golgi apparatus. Studies using yeast mutants made possible the functional and biochemical characterization of individual plant Ca²⁺-ATMPases. Plant calcium pumps play an essential role in signal transduction pathways, they are responsible for the regulation of [Ca²⁺] in both cytoplasm and endomembrane compartments. These Ca²⁺-ATPases appear to be involved in plant adaptation to stress conditions, like salinity, chilling or anoxia.     

Plant Ca2+-ATPases: From biochemistry to signalling

Calcium (Ca²⁺)-ATPases are ATP-dependent enzymes that transport Ca²⁺ ions against their electrochemical gradient playing the fundamental biological function of keeping the free cytosolic Ca²⁺ concentration in the submicromolar range to prevent cytotoxic effects. In plants, type IIB autoinhibited Ca²⁺-ATPases (ACAs) are localised both at the plasma membrane and at the endomembranes including endoplasmic reticulum (ER) and tonoplast and their activity is primarily regulated by Ca²⁺-dependent mechanisms. Instead, type IIA ER-type Ca²⁺-ATPases (ECAs) are present mainly at the ER and Golgi Apparatus membranes and are active at resting Ca²⁺. Whereas research in plants has historically focused on the biochemical characterization of these pumps, more recently the attention has been also addressed on the physiological roles played by the different isoforms. This review aims to highlight the main biochemical properties of both type IIB and type IIA Ca²⁺ pumps and their involvement in the shaping of cellular Ca²⁺ dynamics induced by different stimuli.     

Ca2+ signals in plant immunity

Calcium ions function as a key second messenger ion in eukaryotes. Spatially and temporally defined cytoplasmic Ca²⁺ signals are shaped through the concerted activity of ion channels, exchangers, and pumps in response to diverse stimuli; these signals are then decoded through the activity of Ca²⁺‐binding sensor proteins. In plants, Ca²⁺ signaling is central to both pattern‐ and effector‐triggered immunity, with the generation of characteristic cytoplasmic Ca²⁺ elevations in response to potential pathogens being common to both. However, despite their importance, and a long history of scientific interest, the transport proteins that shape Ca²⁺ signals and their integration remain poorly characterized. Here, we discuss recent work that has both shed light on and deepened the mysteries of Ca²⁺ signaling in plant immunity.     

The effect of ion pumps on the speed of travelling waves in the fire-diffuse-fire model of Ca2+ release

The fire-diffuse-fire model provides an idealized model of Ca²⁺ release within living cells. The effect of calcium pumps, which drive Ca²⁺ back into internal stores, is often neglected for mathematical simplicity. Here we show how to explicitly analyse such effects by extending the work of Keizer et al. [Keizer, J. E., G. D. Smith, S. Ponce Dawson and J. Pearson (1998). Saltatory propagation of Ca²⁺ waves by Ca²⁺ sparks. Biophys. J. 75, 595–600.]. For travelling waves, in which release events occur sequentially, we construct the speed of waves in terms of the time-scale at which pumps operate. An immediate consequence of this analysis is that the inclusion of calcium pumps leads to multiple solutions. A linear stability analysis determines those solution branches in parameter space which are stable. Numerical continuation is used to provide explicit examples of the bifurcation diagrams of the speed of waves as a function of physiologically significant system parameters.     

Phenotypic changes in Arabidopsis caused by expression of a yeast vacuolar Ca2+/H+ antiporter

In plants, cytosolic Ca²⁺ levels are tightly regulated, and changes in cytosolic Ca²⁺ have been implicated in converting numerous signals into adapted responses. Vacuolar ion transporters are thought to be key mediators of cytosolic Ca²⁺ concentrations. In an attempt to interpret the role of vacuolar Ca²⁺ transport in plant processes, we have expressed the yeast vacuolar Ca²⁺/H⁺ antiporter, VCX1, in Arabidopsis and tobacco. This transporter localizes to the plant vacuolar membrane. VCX1-expressing Arabidopsis plants displayed increased sensitivity to sodium and other ions. These ion sensitivities could be suppressed by addition of calcium to the media. VCX1-expressing plants demonstrated increased tonoplast-enriched Ca²⁺/H⁺ antiport activity as well as increased Ca²⁺ accumulation. These results suggest that VCX1 expression in Arabidopsis could be a valuable tool with which to experimentally dissect the role of Ca²⁺ transport around the plant vacuole.     

Calcium-Based Interactions of Symbiotic Partners in Legumes: Role of Peribacteroid Membrane

Based on experimental evidence, a concept is formulated that mutualistic relationships between pro- and eukaryotic cells during nitrogen-fixing legume–rhizobia symbiosis rely both on selective transfer of metabolites and ion transport, Ca²⁺ in particular, across the peribacteroid membrane (PBM). PBM in the nitrogen-fixing cells of yellow lupine (Lupinus luteus L.) and broad bean (Vicia faba L.) is endowed with a calcium-translocating ATPase that pumps Ca²⁺ into the symbiosome. This pumping ensures, on the one hand, calcium homeostasis in the cytosol of infected plant cells and, on the other hand, it optimizes Ca²⁺ level in symbiosomes, first of all in the bacteroids, because Ca²⁺ is one of the main factors controlling their nitrogenase activity. The balance between the symbiotic partners and the maintenance of optimal Ca²⁺ level in the bacteroids also depends on passive Ca²⁺ efflux from symbiosomes to the plant cell cytosol via calcium channels. The Ca²⁺-transporting mechanisms residing at PBM are characterized.     

A tomato ER-type Ca-ATPase, LCA1, has a low thapsigargin-sensitivity and can transport manganese

Recombinant Ca²⁺-ATPase from tomato (i.e. LCA1 for Lycopersicon esculentum [Since the identification and naming of LCA1, the scientific name for the tomato has been changed to Solanum lycopersicum.] Ca-ATPase) was heterologously expressed in yeast for structure-function characterization. We investigate the differences between plant and animal Ca pumps utilizing comparisons between chicken and rabbit SERCA-type pumps with Arabidopsis (ECA1) and tomato plant (LCA1) Ca²⁺-ATPases. Enzyme function was confirmed by the ability of each Ca²⁺-ATPase to rescue K616 growth on EGTA-containing agar and directly via in vitro ATP hydrolysis. We found LCA1 to be ∼300-fold less sensitive to thapsigargin than animal SERCAs, whereas ECA1 was thapsigargin-resistant. LCA1 showed typical pharmacological sensitivities to cyclopiazonic acid, vanadate, and eosin, consistent with it being a P_IIA-type Ca²⁺-ATPase. Possible amino acid changes responsible for the reduced plant thapsigargin-sensitivity are discussed. We found that LCA1 also complemented K616 yeast growth in the presence of Mn²⁺, consistent with moving Mn²⁺ into the secretory pathway and functionally compensating for the lack of secretory pathway Ca-ATPases (SPCAs) in plants.     

Effects of Endogenous Salicylic Acid During Calcium Deficiency-Induced Tipburn in Chinese Cabbage (<Emphasis Type="Italic">Brassica rapa</Emphasis> L. ssp. <Emphasis Type="Italic">pekinensis</Emphasis>)

By cultivating tipburn-susceptible plants in modified Hoagland’s medium containing of gradient exogenous calcium (Ca²⁺), we have shown that Ca²⁺ deficiency is one of the main causes of tipburn in Chinese cabbage (Brassica rapa L. ssp. pekinensis). The effect of endogenous plant Ca²⁺ concentrations on tipburn was also studied in a doubled haploid (DH) population consisting of 100 individuals, but no correlation was found. We then examined the expression of 12 Ca²⁺ transporter genes that function in cytosolic Ca²⁺ homeostasis in both tipburn-susceptible and tipburn-resistant plants under normal and tipburn-inducing conditions. Expression patterns for most of these genes differed between the two types of plants. Salicylic acid (SA) accumulated in response to conditions of calcium deficiency in our study, and both total SA and SA β-glucoside (SAG) in tipburn-susceptible plants was ～3-fold higher than it was in resistant plants following Ca²⁺ deficiency treatment. Also, the changes observed in SA levels correlated well with cell death patterns revealed by trypan blue staining. Therefore, we speculate that the cytoplasmic Ca²⁺ fluctuation-induced downstream signaling events, as well as SA signaling or other biological events, are involved in the plant defense response to tipburn in Chinese cabbage.     

The plant vacuole: emitter and receiver of calcium signals

This review portrays the plant vacuole as both a source and a target of Ca²⁺ signals. In plants, the vacuole represents a Ca²⁺ store of enormous size and capacity. Total and free Ca²⁺ concentrations in the vacuole vary with plant species, cell type, and environment, which is likely to have an impact on vacuolar function and the release of vacuolar Ca²⁺. It is known that cytosolic Ca²⁺ signals are often generated by release of the ion from internal stores, but in very few cases has a role of the vacuole been directly demonstrated. Biochemical and electrophysical studies have provided evidence for the operation of ligand- and voltage-gated Ca²⁺-permeable channels in the vacuolar membrane. The underlying molecular mechanisms are largely unknown with one exception: the slow vacuolar channel, encoded by TPC1, is the only vacuolar Ca²⁺-permeable channel cloned to date. However, due to its complex regulation and its low selectivity amongst cations, the role of this channel in Ca²⁺ signalling is still debated. Many transport proteins at the vacuolar membrane are also targets of Ca²⁺ signals, both by direct binding of Ca²⁺ and by Ca²⁺-dependent phosphorylation. This enables the operation of feedback mechanisms and integrates vacuolar transport systems in the wider signalling network of the plant cell.     

Calcium Regulation in the Protozoan Model,Paramecium tetraurelia

Early in eukaryotic evolution, the cell has evolved a considerable inventory of proteins engaged in the regulation of intracellular Ca²⁺ concentrations, not only to avoid toxic effects but beyond that to exploit the signaling capacity of Ca²⁺ by small changes in local concentration. Among protozoa, the ciliate Paramecium may now be one of the best analyzed models. Ciliary activity and exo‐/endocytosis are governed by Ca²⁺, the latter by Ca²⁺ mobilization from alveolar sacs and a superimposed store‐operated Ca²⁺‐influx. Paramecium cells possess plasma membrane‐ and endoplasmic reticulum‐resident Ca²⁺‐ATPases/pumps (PMCA, SERCA), a variety of Ca²⁺ influx channels, including mechanosensitive and voltage‐dependent channels in the plasma membrane, furthermore a plethora of Ca²⁺‐release channels (CRC) of the inositol 1,4,5‐trisphosphate and ryanodine receptor type in different compartments, notably the contractile vacuole complex and the alveolar sacs, as well as in vesicles participating in vesicular trafficking. Additional types of CRC probably also occur but they have not been identified at a molecular level as yet, as is the equivalent of synaptotagmin as a Ca²⁺ sensor for exocytosis. Among established targets and sensors of Ca²⁺ in Paramecium are calmodulin, calcineurin, as well as Ca²⁺/calmodulin‐dependent protein kinases, all with multiple functions. Thus, basic elements of Ca²⁺ signaling are available for Paramecium.     

Calcium Signaling Network in Plants: An Overview

Calcium ion (Ca²⁺) is one of the very important ubiquitous intracellular second messenger molecules involved in many signal transduction pathways in plants. The cytosolic free Ca²⁺ concentration ([Ca²⁺]_cyt) have been found to increased in response to many physiological stimuli such as light, touch, pathogenic elicitor, plant hormones and abiotic stresses including high salinity, cold and drought. This Ca²⁺ spikes normally result from two opposing reactions, Ca²⁺ influx through channels or Ca²⁺ efflux through pumps. The removal of Ca²⁺ from the cytosol against its electrochemical gradient to either the apoplast or to intracellular organelles requires energized ‘active’ transport. Ca²⁺-ATPases and H⁺/Ca²⁺ antiporters are the key proteins catalyzing this movement. The increased level of Ca²⁺ is recognised by some Ca²⁺-sensors or calcium-binding proteins, which can activate many calcium dependent protein kinases. These kinases regulate the function of many genes including stress responsive genes, resulted in the phenotypic response of stress tolerance. Calcium signaling is also involved in the regulation of cell cycle progression in response to abiotic stress. The regulation of gene expression by cellular calcium is also crucial for plant defense against various stresses. However, the number of genes known to respond to specific transient calcium signals is limited. This review article describes several aspects of calcium signaling such as Ca²⁺ requiremant and its role in plants, Ca²⁺ transporters, Ca²⁺-ATPases, H⁺/ Ca²⁺-antiporter, Ca²⁺-signature, Ca²⁺-memory and various Ca²⁺-binding proteins (with and without EF hand).Key Words: Calcium binding proteins, Ca²⁺ channel, Ca²⁺-dependent protein kinases, Ca²⁺/H⁺ antiport, calcium memory, calcium sensors, calcium signatures, Ca²⁺-transporters, EF hand motifs, plant signal transduction     

外源Ca2+和IBA对NaCl胁迫下能源植物杂交狼尾草幼苗生长的影响

以能源植物杂交狼尾草(Pennisetum americanum×P.purpureum)为实验材料,在NaCl胁迫条件下用外源IBA(100 mg/L),CaCl_2(浓度分别为0、1、2、5 mmol/L)处理杂交狼尾草幼苗,处理3周后测定植物的存活率、鲜重、干重、株高、生根数和地上部分、地下部分的离子含量。结果表明,经过IBA溶液预处理的杂交狼尾草幼苗的存活率、鲜重、干重、株高、生根数明显高于未处理的幼苗;在NaCl胁迫下,随着外源Ca~(2+)浓度的升高,杂交狼尾草幼苗的存活率、鲜重、干重、株高、生根数以及Ca~(2+)含量都明显升高并在CaCl_2浓度为2 mmol/L时达到最大值;随着外源Ca~(2+)浓度的升高,Na~+含量、Na~+/K~+降低,当CaCl_2的浓度为2mmol/L时,Na~+含量、Na~+/K~+最低。以上结果表明外源Ca~(2+)和IBA对NaCl胁迫下杂交狼尾草幼苗生长有促进作用,可以缓解NaCl胁迫对杂交狼尾草幼苗生长的抑制作用,提高杂交狼尾草幼苗在NaCl胁迫下的成活率;缓解盐害的最适的Ca~(2+)浓度为2mmol/L。     

CAX‐ing a wide net: Cation/H+ transporters in metal remediation and abiotic stress signalling

Cation/proton exchangers (CAXs) are a class of secondary energised ion transporter that are being implicated in an increasing range of cellular and physiological functions. CAXs are primarily Ca²⁺ efflux transporters that mediate the sequestration of Ca²⁺ from the cytosol, usually into the vacuole. Some CAX isoforms have broad substrate specificity, providing the ability to transport trace metal ions such as Mn²⁺ and Cd²⁺, as well as Ca²⁺. In recent years, genomic analyses have begun to uncover the expansion of CAXs within the green lineage and their presence within non‐plant species. Although there appears to be significant conservation in tertiary structure of CAX proteins, there is diversity in function of CAXs between species and individual isoforms. For example, in halophytic plants, CAXs have been recruited to play a role in salt tolerance, while in metal hyperaccumulator plants CAXs are implicated in cadmium transport and tolerance. CAX proteins are involved in various abiotic stress response pathways, in some cases as a modulator of cytosolic Ca²⁺ signalling, but in some situations there is evidence of CAXs acting as a pH regulator. The metal transport and abiotic stress tolerance functions of CAXs make them attractive targets for biotechnology, whether to provide mineral nutrient biofortification or toxic metal bioremediation. The study of non‐plant CAXs may also provide insight into both conserved and novel transport mechanisms and functions.     

Herbivore exposure alters ion fluxes and improves salt tolerance in a desert shrub

Plants have evolved complex mechanisms that allow them to withstand multiple environmental stresses, including biotic and abiotic stresses. Here, we investigated the interaction between herbivore exposure and salt stress of Ammopiptanthus nanus, a desert shrub. We found that jasmonic acid (JA) was involved in plant responses to both herbivore attack and salt stress, leading to an increased NaCl stress tolerance for herbivore-pretreated plants and increase in K⁺/Na⁺ ratio in roots. Further evidence revealed the mechanism by which herbivore improved plant NaCl tolerance. Herbivore pretreatment reduced K⁺ efflux and increased Na⁺ efflux in plants subjected to long-term, short-term, or transient NaCl stress. Moreover, herbivore pretreatment promoted H⁺ efflux by increasing plasma membrane H⁺-adenosine triphosphate (ATP)ase activity. This H⁺ efflux creates a transmembrane proton motive force that drives the Na⁺/H⁺ antiporter to expel excess Na⁺ into the external medium. In addition, high cytosolic Ca²⁺ was observed in the roots of herbivore-treated plants exposed to NaCl, and this effect may be regulated by H⁺-ATPase. Taken together, herbivore exposure enhance s A. nanus tolerance to salt stress by activating the JA-signalling pathway, increasing plasma membrane H ⁺ - ATPase activity, promoting cytosolic Ca²⁺ accumulation, and then restricting K⁺ leakage and reducing Na⁺ accumulation in the cytosol.     

An ER-targeted calcium-binding peptide confers salt and drought tolerance mediated by CIPK6 in Arabidopsis

Different plant organelles have high internal stores of Ca²⁺ compared to the cytoplasm and could play independent roles in stress responses or signal transduction. We used a GFP fusion with the C-domain of calreticulin, which shows low-affinity, high capacity Ca²⁺ binding in the ER, as a calcium-binding peptide (CBP) to specifically increase stores in the ER and nucleus. Despite the presence of a signal sequence and KDEL retention sequence, our work and previous studies (Brandizzi et al. Plant Journal 34:269–281, 2003) demonstrated both ER and nuclear localization of GFP-CBP. Under normal conditions, GFP-CBP-expressing lines had ~25% more total Ca²⁺ and higher levels of chlorophyll and seed yield than wild type and GFP controls. CBP-expressing plants also had better survival under intermittent drought or high salt treatments and increased root growth. One member of the CIPK (calcineurin B-like interacting protein kinase) gene family, CIPK6, was up-regulated in CBP-expressing plants, even under non-stress conditions. A null mutation in cipk6 abolished the increased stress tolerance of CBP-transgenic plants, as well as the CBP-mediated induction of two stress-associated genes, DREB1A and RD29A, under non-stress conditions. Although this suggested that it was the induction of CIPK6, rather than localized changes in Ca²⁺, that resulted in increased survival under adverse conditions, CIPK6 induction still required Ca²⁺. This work demonstrates that ER (or nuclear) Ca²⁺ can directly participate in signal transduction to alter gene expression. The discovery of a method for increasing Ca²⁺ levels without deleterious effects on plant growth may have practical applications.     

CML9, an Arabidopsis calmodulin-like protein, contributes to plant innate immunity through a flagellin-dependent signalling pathway

Many stimuli such as hormones and elicitors induce changes in intracellular calcium levels to integrate information and activate appropriate responses. The Ca²⁺ signals are perceived by various Ca²⁺ sensors, and calmodulin (CaM) is one of the best characterized in eukaryotes. Calmodulin‐like (CML) proteins extend the Ca²⁺ toolkit in plants; they share sequence similarity with the ubiquitous and highly conserved CaM but their roles at physiological and molecular levels are largely unknown. Knowledge of the contribution of Ca²⁺ decoding proteins to plant immunity is emerging, and we report here data on Arabidopsis thaliana CML9, whose expression is rapidly induced by phytopathogenic bacteria, flagellin and salicylic acid. Using a reverse genetic approach, we present evidence that CML9 is involved in plant defence by modulating responses to bacterial strains of Pseudomonas syringae. Compared to wild‐type plants, the later responses normally observed upon flagellin application are altered in knockout mutants and over‐expressing transgenic lines. Collectively, using PAMP treatment and P. syringae strains, we have established that CML9 participates in plant innate immunity.     

Calcium and pH patterning at the apical meristem are specifically altered by photoperiodic flower induction in Chenopodium spp.

The apical meristem of the short‐day plant Chenopodium rubrum responds to photoperiodic flower induction with specific changes of pH and Ca²⁺ patterning immediately after the inductive dark span. The red–far‐red reversibility of the pH and Ca²⁺ patterning in response to night break treatments was measured in order to distinguish between the effect of the prolonged dark span per se and the specific effect of photoperiodic flower induction. In addition, the pH and Ca²⁺ patterning in C. rubrum was compared with the long‐day plant Chenopodium murale. The pH was visualized using the fluorescent probe carboxy SNARF‐1. Calcium ion concentrations were studied using a combination of Ca²⁺‐probes Fluo‐3 and Fura Red. It was observed that the specific changes in pH and Ca²⁺ patterning at the apical meristem of C. rubrum were abolished by the red‐light break. This effect was fully reversed with a subsequent single far‐red treatment. These observations infer the influence of phytochrome on both pH and Ca²⁺ patterning. Changes in pH and Ca²⁺ patterning upon flower induction were observed in both long‐day and short‐day plants. These results support the hypothesis that changes of pH and [Ca²⁺] in cells of the apical meristem are part of the pathway in signal transduction triggering flower initiation.     

Temperature Sensing by Plants: Calcium-Permeable Channels as Primary Sensors—A Model

Recently the properties of temperature sensing in plants have been demonstrated experimentally by Plieth et al. (The Plant Journal 1999. 18:491–497). The relevant biophysical parameters are established here by mathematical modeling in order to understand the experimental findings in quantitative terms. A simple one-compartment model is presented, as a preliminary approach to explain how the input signal (i.e., temperature T) is perceived and how the information is translated into an output signal in the plant cell (i.e., [Ca²⁺] _c ). The model is based on the fact that calcium influx into the cytoplasm is mediated by calcium-permeable channels which are assumed to be solely dependent on cooling rate (dT/dt) and calcium efflux is mediated by calcium pumps which have been shown to be dependent on absolute temperature (T). Firstly, it is demonstrated that this model is able to meet the demand for a satisfactory interpretation of the experimental data, and secondly that it reproduces the experimentally observed features of the cooling induced [Ca²⁺] _c changes well. This suggests that the primary temperature sensor in plants might be a Ca²⁺-permeable channel. Received: 4 June 1999/Revised: 26 July 1999     

De-regulated expression of the plant glutamate receptor homolog AtGLR3.1 impairs long-term Ca2+-programmed stomatal closure

Cytosolic Ca²⁺ ([Ca²⁺]_cyt) mediates diverse cellular responses in both animal and plant cells in response to various stimuli. Calcium oscillation amplitude and frequency control gene expression. In stomatal guard cells, [Ca²⁺]_cyt has been shown to regulate stomatal movements, and a defined window of Ca²⁺ oscillation kinetic parameters encodes necessary information for long‐term stomatal movements. However, it remains unknown how the encrypted information in the cytosolic Ca²⁺ signature is decoded to maintain stomatal closure. Here we report that the Arabidopsis glutamate receptor homolog AtGLR3.1 is preferentially expressed in guard cells compared to mesophyll cells. Furthermore, over‐expression of AtGLR3.1 using a viral promoter resulted in impaired external Ca²⁺‐induced stomatal closure. Cytosolic Ca²⁺ activation of S‐type anion channels, which play a central role in Ca²⁺‐reactive stomatal closure, was normal in the AtGLR3.1 over‐expressing plants. Interestingly, AtGLR3.1 over‐expression did not affect Ca²⁺‐induced Ca²⁺ oscillation kinetics, but resulted in a failure to maintain long‐term ‘Ca²⁺‐programmed’ stomatal closure when Ca²⁺ oscillations containing information for maintaining stomatal closure were imposed. By contrast, prompt short‐term Ca²⁺‐reactive closure was not affected in AtGLR3.1 over‐expressing plants. In wild‐type plants, the translational inhibitor cyclohexamide partially inhibited Ca²⁺‐programmed stomatal closure induced by experimentally imposed Ca²⁺ oscillations without affecting short‐term Ca²⁺‐reactive closure, mimicking the guard cell behavior of the AtGLR3.1 over‐expressing plants. Our results suggest that over‐expression of AtGLR3.1 impairs Ca²⁺ oscillation‐regulated stomatal movements, and that de novo protein synthesis contributes to the maintenance of long‐term Ca²⁺‐programmed stomatal closure.