Biofortification of rice grain with zinc through zinc fertilization in different countries

Aims and background

The ability to suppress soil nitrification through the release of nitrification inhibitors from plant roots is termed ‘biological nitrification inhibition’ (BNI). Earlier, we reported that sorghum roots release higher BNI-activity when grown with NH ₄ ⁺ , but not with NO ₃ ^- as N source. Also for BNI release, rhizosphere pH of <5.0 is needed; beyond this, a negative effect on BNI release was observed with nearly 80% loss of BNI activity at pH >7.0. This study is aimed at understanding the inter-functional relationships associated with NH ₄ ⁺ uptake, rhizosphere-pH and plasma membrane H⁺-ATPase (PM H⁺-ATPase) activity in regulating the release of BNIs (biological nitrification inhibitors) from sorghum roots.

Methods

Sorghum was grown hydroponically and root exudates were collected from intact plants using a pH-stat system to separate the secondary acidification effects by NH ₄ ⁺ uptake on BNIs release. A recombinant luminescent Nitrosomonas europaea bioassay was used to determine BNI-activity. Root plasma membrane was isolated using a two-phase partitioning system. Hydrolytic H⁺-ATPase activity was determined. Split-root system setup was deployed to understand the localized responses to NH ₄ ⁺ , H⁺-ATPase-stimulator (fusicoccin) or H⁺-ATPase-inhibitor (vanadates) on BNI release by sorghum.

Results

Presence of NH ₄ ⁺ in the rhizosphere stimulated the expression of H⁺-ATPase activity and enhanced the release of BNIs from sorghum roots. Fusicoccin, which stimulates H⁺-ATPase activity, also stimulated BNIs release in the absence of NH ₄ ⁺ ; vanadate, which suppresses H⁺-ATPase activity, also suppressed the release of BNIs. NH ₄ ⁺ levels (in rhizosphere) positively influenced BNIs release and root H⁺-ATPase activity in the concentration range of 0-1.0 mM, indicating a close relationship between BNI release and root H⁺-ATPase activity with a possible involvement of carrier-mediated transport for the release of BNIs in sorghum.

Conclusion

Our results suggest that NH ₄ ⁺ uptake, PM H⁺-ATPase activity, and rhizosphere acidification are functionally inter-connected with BNI release in sorghum. Such knowledge is critical to gain insights into why BNI function is more effective in light-textured, mildly acidic soils compared to other soil types.     

Effect of nitrogen form and phosphorus source on the growth,nutrient uptake and rhizosphere soil property of Camellia sinensis L.

The effects of nitrogen form and phosphorus source on the growth, nutrient uptake and rhizosphere soil property of tea (Camellia sinensis L.) were investigated in a pot experiment. The experiment was performed with a compartmental cropping device, which enables the collection of rhizosphere soil at defined distances from the root of tea plant. Nitrogen was supplied as nitrate or ammonium in combination with soluble phosphorus as Ca(H₂PO₄)₂ or insoluble P as rock phosphate. The leaf dry matter production of tea was significantly greater in the treatments with NH₄ ⁺ than NO₃ ^-, whereas dry matter production of root and stem was not significantly affected. Addition of phosphorus as either source did not influence the dry matter production. The concentrations of K in root, Mg and Ca in both the shoot and root supplied with NO₃ ^- were significantly higher than in NH₄ ⁺ and influence of P sources was minor. On the contrary, Al and Mn concentrations were significantly larger in NH₄ ^--fed plants which could be attributed to remarkably increased availability of Al and Mn caused by acidification of the rhizosphere soil (the first 1-mm soil section from the root surface) with NH₄–N nutrition. The concentration of N in shoot was also significantly higher in NH₄- than in NO₃-fed plants, indicating higher use efficiency of NH₄–N. Whatever the phosphate source, rhizosphere pH declined in ammonium compared to in nitrate treatment. The pH decrease was much larger when no P or soluble P were applied and reached 0.85–1.30 units which extended to 3–5 mm away from the root surface. Exchangeable acidity, content of exchangeable Al and Mn were also considerably higher in the rhizosphere soils of NH₄ ⁺ fed tea plants. Significant amounts of P dissolved from rock phosphate accumulated in rhizosphere of NH₄ ⁺, not NO₃ ^-, suggesting that the dissolution of rock phosphate was induced by the proton excreted by tea root fed with ammonium. With soluble P addition, shoot and root P concentrations were greater in NH₄ ⁺ than in NO₃ ^- treatment and it appeared that this difference could not be sufficiently explained by the available P content in soil which was only slightly higher in NH₄ ⁺ treatment. With rock phosphate addition, the shoot and root P concentrations were hardly affected by nitrogen form, although the available P content was much higher and accumulated in the rhizosphere soil supplied with ammonium. The reason for this was discussed with regard to the inter-relationship of Al with P uptake. This revised version was published online in June 2006 with corrections to the Cover Date.     

Positive feedback between acidification and organic phosphate mineralization in the rhizosphere of maize (Zea mays L.)

To test the hypothesis that rhizosphere acidification would enhance the hydrolyzation of organic phosphates by increasing phosphatase activity. A Petri dish experiment with sterile agar and a pot experiment with a low P soil were used. In the Petri dish experiment, roots of each plant were cultured in two compartments, each of which contained agar with one of three nitrogen combinations: NH ₄ ⁺ /N0 (N0 = nitrogen free), NH ₄ ⁺ /NO ₃ ^- , and NO ₃ ^- /N0. Phytin was supplied as the sole phosphorus (P) source to all compartments. In the pot experiment, the soil in each pot was treated with N0, KNO₃, or (NH₄)₂SO₄) together with 0 or 75 mg kg^?1 phytin-P. Dry weight, P concentration, and P content of roots were highest in the NH ₄ ⁺ compartments in the Petri dish experiment. In the pot experiment, dry weight, P concentration, and P content of both shoots and roots were higher with NH ₄ ⁺ than with NO ₃ ^- . NH ₄ ⁺ treatments reduced rhizosphere pH, promoted the hydrolization of phytin, enhanced acid phosphatase activity in the rhizosphere, and increased phytin-P utilization relative to N0 and NO ₃ ^- treatments. Phosphatase activity was negatively correlated with rhizosphere pH but was positively correlated with plant P content in both experiments. Rhizosphere acidification optimized the activity of acid phosphatase excreted by maize roots and promoted phytin mineralization. NH ₄ ⁺ -induced acidification in the maize rhizosphere improved the growth of maize roots by improving P uptake from phytin; the improved growth, in turn, increased NH ₄ ⁺ uptake and acidification.     

Gross Nitrogen Dynamics in the Mycorrhizosphere of an Organic Forest Soil

The rhizosphere is a hot-spot for biogeochemical cycles, including production of greenhouse gases, as microbial activity is stimulated by rhizodeposits released by roots and mycorrhizae. The biogeochemical cycle of nitrogen (N) in soil is complex, consisting of many simultaneously occurring processes. In situ studies investigating the effects of roots and mycorrhizae on gross N turnover rates are scarce. We conducted a ¹⁵N tracer study under field conditions in a spruce forest on organic soil, which was subjected to exclusion of roots and roots plus ectomycorrhizae (ECM) for 6 years by trenching. The forest soil had, over the 6-year period, an average emission of nitrous oxide (N₂O) of 5.9 ± 2.1 kg N₂O ha^?1 year^?1. Exclusion of roots + ECM nearly tripled N₂O emissions over all years, whereas root exclusion stimulated N₂O emission only in the latest years and to a smaller extent. Gross mineralization–ammonium (NH₄ ⁺) immobilization turnover was enhanced by the presence of roots, probably due to high inputs of labile carbon, stimulating microbial activity. We found contrasting effects of roots and ECM on N₂O emission and mineralization, as the former was decreased but the latter was stimulated by roots and ECM. The N₂O emission was positively related to the ratio of gross NH₄ ⁺ oxidation (that is, autotrophic nitrification) to NH₄ ⁺ immobilization. Ammonium oxidation was only stimulated by the presence of ECM, but not by the presence of roots. Overall, we conclude that plants and their mycorrhizal symbionts actively control soil N cycling, thereby also affecting N₂O emissions from forest soils. Consequently, adapted forest management with permanent tree cover avoiding clearcutting could be a means to reduce N₂O emissions and potential N leaching; despite higher mineralization in the presence of roots and ECM, N₂O emissions are decreased as the relative importance of NH₄ ⁺ oxidation is decreased, mainly due to a stimulated microbial NH₄ ⁺ immobilization in the mycorrhizosphere.     

Forms of nitrogen inputs regulate the intensity of soil acidification

Soil acidification induced by reactive nitrogen (N) inputs can alter the structure and function of terrestrial ecosystems. Because different N-transformation processes contribute to the production and consumption of H⁺, the magnitude of acidification likely depends on the relative amounts of organic N (ON) and inorganic N (IN) inputs. However, few studies have explicitly measured the effects of N composition on soil acidification. In this study, we first conducted a meta-analysis to test the effects of ON or IN inputs on soil acidification across 53 studies in grasslands. We then compared soil acidification across five different ON:IN ratios and two input rates based on long-term field N addition experiments. The meta-analysis showed that ON had weaker effects on soil acidification than IN when the N addition rate was above 20 g N m⁻² year⁻¹. The field experiment confirmed the findings from meta-analysis: N addition with proportions of ON ≥ 20% caused less soil acidification, especially at a high input rate (30 g N m⁻² year⁻¹). Structural equation model analysis showed that this result was largely due to a relatively low rate of H⁺ production from ON as NH₃ volatilization and uptake of ON and NH₄⁺ by the dominant grass species Leymus chinensis (which are both lower net contributors to H⁺ production) result in less NH₄⁺ available for nitrification (which is a higher net contributor to H⁺ production). These results indicate that the evaluation of soil acidification induced by N inputs should consider N forms and manipulations of relative composition of N inputs may provide an effective approach to alleviate the N-induced soil acidification.     

γ‐Aminobutyric acid addition alleviates ammonium toxicity by limiting ammonium accumulation in rice (Oryza sativa) seedlings

Excessive use of nitrogen (N) fertilizer has increased ammonium (NH₄⁺) accumulation in many paddy soils to levels that reduce rice vegetative biomass and yield. Based on studies of NH₄⁺ toxicity in rice (Oryza sativa, Nanjing 44) seedlings cultured in agar medium, we found that NH₄⁺ concentrations above 0.75 mM inhibited the growth of rice and caused NH₄⁺ accumulation in both shoots and roots. Use of excessive NH₄⁺ also induced rhizosphere acidification and inhibited the absorption of K, Ca, Mg, Fe and Zn in rice seedlings. Under excessive NH₄⁺ conditions, exogenous γ‐aminobutyric acid (GABA) treatment limited NH₄⁺ accumulation in rice seedlings, reduced NH₄⁺ toxicity symptoms and promoted plant growth. GABA addition also reduced rhizosphere acidification and alleviated the inhibition of Ca, Mg, Fe and Zn absorption caused by excessive NH₄⁺. Furthermore, we found that the activity of glutamine synthetase/NADH‐glutamate synthase (GS; EC 6.3.1.2/NADH‐GOGAT; EC1.4.1.14) in root increased gradually as the NH₄⁺ concentration increased. However, when the concentration of NH₄⁺ is more than 3 mM, GABA treatment inhibited NH₄⁺‐induced increases in GS/NADH‐GOGAT activity. The inhibition of ammonium assimilation may restore the elongation of seminal rice roots repressed by high NH₄⁺. These results suggest that mitigation of ammonium accumulation and assimilation is essential for GABA‐dependent alleviation of ammonium toxicity in rice seedlings.     

Dynamics of phosphorus in the rhizosphere of maize and rape grown on synthetic,phosphated calcite and goethite

In calcareous soils the dynamics of phosphorus is controlled by calcite and iron oxides such as goethite which strongly retain P and consequently maintain low P concentrations in soil solution. Plants can drastically change chemical conditions in the rhizosphere, in particular by releasing H⁺ or OH⁻ or by excreting organic anions. By modifying the dissolution/precipitation and desorption/adsorption equilibria, roots can influence the mobility of soil P. The aim of this work was to test whether H⁺ or OH⁻ release can induce the mobilization of P in the rhizosphere of maize and rape supplied with NO₃-N or NH₄-N and grown on synthetic phosphated calcite or goethite as sole source of P. With P-calcite, the mobilization of P was generally related to the acidification of the rhizosphere. With P-goethite, rhizosphere acidification induced some increase of DTPA-extractable Fe and hence dissolution of goethite. Rhizosphere P was concomitantly depleted but the mechanisms involved are less clear. The difference in behavior of the two species is discussed. This revised version was published online in June 2006 with corrections to the Cover Date.     

Plant-mediated processess to acquire nutrients: nitrogen uptake by rice plants

The ways in which root–soil interactions can control nutrient acquisition by plants is illustrated by reference to the N nutrition of rice. Model calculations and experiments are used to assess how uptake is affected by root properties and N transport through the soil. Measurements of the kinetics of N absorption and assimilation and their regulation, and of interactions between NH₄ ⁺ and NO₃ ^– nutrition, are described. It is shown that uptake of N from the soil–-as opposed to N in ricefield floodwater which can be absorbed very rapidly but is otherwise lost by gaseous emission–-will often be limited by root uptake properties. Rice roots are particularly efficient in absorbing and assimilating NO₃ ^–, and NH₄ ⁺ absorption and assimilation are stimulated by NO₃ ^–. The uptake of NO₃ ^– formed in the rice rhizosphere by root-released O₂ may be more important than previously thought, with beneficial consequences for rice growth. Other root-induced changes in the rice rhizosphere and their consequences are discussed.     

The fate of carbon and fertiliser nitrogen when dryland wheat is grown in monoliths of duplex soil

Triticum aestivum L. (cv. Gutha), a short-season wheat, was grown to maturity in large monoliths of duplex soil (sand over sandy-clay) in a daylight phytotron mimicking field conditions. Either ¹⁵N-labelled ammonium sulphate ((NH₄)₂SO₄) or urea was banded into the soil at a rate of 30 kg N ha^–1: even though roots were about 20% heavier when grown in the presence of (NH₄)₂SO₄ for 86 d (P<0.05), above-ground mass was not affected by the source of nitrogen. At four times through crop development up to grain-filling (50, 56, 70 and 86 d after sowing) shoots were labelled heavily with ¹⁴CO₂ with two purposes. First, to trace `instantaneous' assimilate movement over 24 h, revealing relative sink strengths throughout plants. This, in turn, allowed precise measurements of live root mass and the proportion of recent photoassimilates deposited in the rhizosphere. Although root systems were sparse, even in surface soil layers, they were strong sinks for photoassimilates early in development (0–50 d), supporting the conversion of inorganic applied nitrogen (N) to soil organic forms. In the presence of roots, up to 28% of ¹⁵N was immobilised, whereas only 12% of labelled ammonium sulphate was immobilised in unplanted plots in spite of a favourable moisture status in both treatments. The effect of plants on rates of ¹⁵N transformation is ascribed to recently imported photoassimilates sustaining rhizosphere metabolism. Not more than 15% of recently fixed carbon imported by roots was recovered from the rhizoplane, suggesting that a highly localised microbial biomass supported vigorous immobilisation of soil N. Thus, more than twice as much applied N was destined for soil organic fractions as for root material. By these processes, root- and soil-immobilised N become substantial stores of applied N and together with shoot N accounted for all the applied N under dryland conditions.     

Nitrogen limitation in mycorrhizal Norway spruce (Picea abies) seedlings induced mycelial foraging for ammonium: implications for Ca and Mg uptake

Although many studies support the importance of the external mycelium for nutrient acquisition of ectomycorrhizal plants, direct evidence for a significant contribution to host nitrogen nutrition is still scarce. We grew nonmycorrhizal seedlings and seedlings mycorrhizal with Paxillus involutus (Batsch) Fr. in a sand culture system with two compartments separated by a 45-m Nylon mesh. Hyphae, but not roots, can penetrate this net. Nutrient solutions were designed to limit seedling growth by nitrogen. Hyphal density in the hyphal compartment, host N status and shoot growth of mycorrhizal seedlings significantly increased in response to NH₄ ⁺ addition to the hyphal compartment. Labeling the compartment only accessible to hyphae with ¹⁵NH₄ ⁺ showed that the increase in N uptake in the mycorrhizal seedlings was a result of hyphal N acquisition from the hyphal compartment. These results indicate that hyphae of P. involutus may actively forage into N-rich patches and improve host N status and growth. In the mycorrhizal seedlings, which received additional NH₄ ⁺ via their external mycelium, the increase in NH₄ ⁺ supply less negatively affected Ca and Mg uptake than in nonmycorrhizal seedlings, where the additional NH₄ ⁺ was directly supplied to the roots. This was most likely due to the close link of NH₄ ⁺ uptake and H⁺ extrusion, which, in the nonmycorrhizal seedlings, lead to a strong acidification in the root compartment, and subsequently reduced Ca and Mg uptake, whereas in the mycorrhizal seedlings the site of intensive NH₄ ⁺ uptake and acidification was in the hyphal and not in the root compartment. Our data support the idea that the ectomycorrhizal mycelium connected to an N-deficient host may actively forage for N. The mycelium may also be important as a biological buffer system ameliorating negative influence of high NH₄ ⁺ supply on cation uptake.     

Localization and capacity of proton pumps in roots of intact sunflower plants

Proton extrusion by roots of intact sunflower plants (Helianthus annuus L.) was studied in nutrient solutions or in agar media with a pH indicator. Proton extrusion was enhanced by either iron deficiency, addition of fusicoccin, or single salt solutions of ammonium or potassium salts. The three types of proton extrusion differ in both localization along the roots and capacity. From their sensitivity to ATPase inhibitors it seems justified to characterize them as proton pumps driven by plasma membrane APTases.

Enhanced proton extrusion induced by preferential cation uptake from (NH₄)₂SO₄ or K₂SO₄ was uniformly distributed over the whole root system. In contrast, the enhancement effect of fusicoccin was confined to the basal root zones and that of iron deficiency to the apical root zones. Also the rates of proton extrusion per unit of root fresh weight differed remarkably and increased in the order: Fusicoccin K₂SO₄ < (NH₄)₂SO₄ < iron deficiency.

Under iron deficiency the average values of proton extrusion for the whole root system are 5.6 micromoles H⁺ per gram fresh weight per hour; however, for the apical root zones values of about 28 micromoles H⁺ can be calculated. This high capacity is most probably related to the iron deficiency-induced formation of rhizodermal transfer cells in the apical root zones. It can be assumed that the various types of root-induced acidification of the rhizosphere are of considerable ecological importance for the plant-soil relationships in general and for mobilization of mineral nutrients from sparingly soluble sources in particular.

     

Soil acidification as caused by the nitrogen uptake pattern of Scots pine (Pinus sylvestris)

Three-year-old Scots pine (Pinus sylvestris) trees were grown on a sandy forest soil in pots, with the objective to determine their NH₄/NO₃ uptake ratio and proton efflux. N was supplied in three NH₄-N/NO₃-N ratios, 3:1, 1:1 and 1:3, either as ¹⁵NH₄+¹⁴NO₃ or as ¹⁴NH₄+¹⁵NO₃. Total N and ¹⁵N acquisition of different plant parts were measured. Averaged over the whole tree, the NH₄/NO₃ uptake ratios throughout the growing season were found to be 4.2, 2.5, and 1.5 for the three application ratios, respectively. The excess cation-over-anion uptake value (C_a-A_a) appeared to be linearly related to the natural logarithm of the NH₄/NO₃ uptake ratio. Further, this uptake ratio was related to the NH₄/NO₃ ratio of the soil solution. From these relationship it was estimated that Scots pine exhibits an acidifying uptake pattern as long as the contribution of nitrate to the N nutrition is lower than 70%. Under field circumstances root uptake may cause soil acidification in the topsoil, containing the largest part of the root system, and soil alkalization in deeper soil layers.     

Nitrogen Acquisition from Atmospheric NH3 by Lolium perenne

Ammonia (NH₃) is the third most abundant N species in the atmosphere and, due to various natural and anthropogenic sources, can reach high concentrations in some areas. While some plants show effects of toxicity, others are capable of using this N-form and grow well without any utilization of soil-N. Acquisition of atmospheric NH₃ will affect the acid-base balance of the plants as absorption and dissolution causes an alkalinisation (production of OH^?) and assimilation of NH₃ results in an acidification (generation of H⁺). As there is only a limited capacity for biochemical disposal of excess H⁺ in shoots, pH regulation may involve H⁺/OH^? extrusion into the media via roots and transport of (in)organic ions between roots and above-ground parts of the plant. Our aim therefore was to assess NH₃ acquisition by Lolium perenne and to study the effects of gas phase NH₃ on growth, acid-base balance and mineral composition of the plants. The experiments therefore included application of a range of ¹⁴NH₃ to the shoots and of ¹⁵N as NO₃^?, NH₄⁺ or NH₄NO₃ to the roots, from which the amount of gas phase NH₃ acquisition could be quantified. Analysis of the mineral composition provided data for calculation of acid-base balance as well as for water use efficiencies of the plants. The results indicate that over the range of NH₃ supplied, plants from all treatments could utilize gas-phase NH₃ as demonstrated by increases in growth and in N and C use efficiencies. Plants receiving NO₃^? via their roots had a higher capacity to use gaseous NH₃ than those growing with NH₄⁺. NH₃ assimilation in shoots reduced both the acid load with NH₄⁺ nutrition and the alkaline load with NO₃^? supply to the roots. The results of the experiments are discussed in relation to possible acid-base regulation mechanisms of the whole plant.     

Transpiration and drought resistance of Douglas-fir seedlings exposed to excess ammonium

 In a pot trial growth and transpiration of 3-year-old Douglas-fir seedlings on an acid, sandy soil was examined at a deficient (30 kg N ha^{–  1} year^{–  1}) and an excessive level (120 kg N ha^{–  1} year^{–  1}) of NH₄ application. Dissolved ammonium sulphate was applied to the pots weekly for two growing seasons. In half of the pots a complete set of other nutrients was applied in optimal proportions to the applied nitrogen. Water supply was optimal and transpiration was recorded. At the end of the second treatment season irrigation was stopped for 2 weeks during dry and sunny weather. Both high application of NH₄ and additional nutrients increased shoot growth and transpiration demand in the first treatment year. The root system was smaller at higher N level and this reduced water uptake accordingly. In the second year the combination of high NH₄ ⁺ and additional nutrients affected root functioning predominantly due to salinity effects and this seriously decreased water uptake capacity and shoot water potentials, finally resulting in tree death. Without addition of other nutrients the high NH₄ ⁺ application resulted in a high degree of soil acidification, which damaged the roots, that showed a decrease in water uptake capacity. At the low NH₄ supply level soil acidification was lower, and root functioning was not affected, and the trees recovered quickly from the imposed drought. Higher needle K and P status depressed transpiration rates at the low NH₄ application rate. Received: 9 January 1995 / Accepted: 18 September 1995     

Implications of N acquisition from atmospheric NH3 for acid-bAse and cation-anion balance of Lolium perenne

In the atmosphere, ammonia (NH₃) is the third most abundant N species which, due to various natural and anthropogenic sources, can locally reach high concentrations. The acquisition of atmospheric NH₃ by plant shoots will lead to two opposing effects on acid-base balance. Absorption and dissolution of NH₃ will cause an alkalinisation, while the assimilation of NH₃ results in an acidification. Different rates of these processes would lead to an acid-base imbalance with consequences for the ionic balance of the plant. As there is only a limited capacity for biochemical disposal of excess H⁺ in shoots, pH regulation may involve a pattern of (in)organic ion flow between shoots and roots followed by H⁺/OH^? extrusion into the media via roots. The acquisition of NH₃ as additional N source should lead to a reduction in the ratio of mol H⁺/OH^? gained per mol N assimilated. We have recently investigated the NH₃ acquisition by Lolium perenne L. cv. Centurion and studied the effects of gas phase NH₃ on growth, acid-base balance and water-use efficiency. The experiments, therefore, included the application of a range of ¹⁴NH₃ to the shoots and of ¹⁵N as NO₃^?, NH₄⁺ or NH₄NO₃ to the roots. After a summary of the main conclusions from those experiments, we discuss the implications of the use of atmospheric NH₃ for the mineral composition of the plants. Over the range of NH₃ supplied, plants from all treatments could utilize gas-phase NH₃. Plants receiving NO₃^? via their roots had a higher capacity to use gaseous NH₃ than those growing with NH₄⁺. NH₃ assimilation in shoots reduced both the acid load with NH₄⁺ nutrition and the alkaline load with NO₃^? supply to the roots. The most significant effect of fumigation on the ion balance was an increase in K⁺ within all treatments, and this effect was highest in the NH₄⁺-fed plants. The results of the experiments support predictions of a combination of neutralizing biochemical reactions as well as transport of organic anion salts between shoots and roots as possible acid-base regulation mechanisms of the whole plant.     

Advantages of NH4 + on growth, nitrogen uptake and root respiration of Phragmites australis

We investigated growth, N nutrition, and root respiration in Phragmites australis (Cav.) Trin. ex Steud. grown under conditions with different N sources, and evaluated the advantages of NH₄ ⁺ nutrition in relation to adaptation to anaerobic soil conditions. Hydroponics culture was carried out for 2 months under two treatment conditions with different N sources, NH₄ ⁺ and NO₃ ^?. The relative growth rate (RGR) of the roots, shoot and whole plant, net N uptake rate (NNUR), and root respiration rate were examined. Shoot RGR, shoot to root (S/R) ratio, and NNUR were obviously higher with the NH₄ ⁺ treatment. High S/R ratio of plants grown in the NH₄ ⁺ treatment contributed to repression of whole-root oxygen consumption. In consequence, NNUR per root respiration rate was higher with the NH₄ ⁺ treatment, which clearly suggested efficient oxygen consumption in the roots. In conclusion, higher S/R ratio due to higher NNUR enable to efficiently use oxygen for N nutrition through the repression of whole-root oxygen consumption, which is consequently achieved by NH₄ ⁺ nutrition. Therefore, we suggest that NH₄ ⁺ nutrition is indispensable for hydrophytic species growing in anaerobic soil because it enables both sufficient N nutrition and efficient oxygen consumption.     

Importance of ferric chelate reductase activity and acidification capacity in root nodules of N2-fixing common bean (Phaseolus vulgaris L.) subjected to iron deficiency

Iron is an essential nutrient for plants, especially in symbiotic N₂-fixing legumes. Although abundant in the soil, iron is generally not available to plants as it is predominantly in an insoluble form (Fe^III) . Mono- and dicotyledonous plants, except Grarnineae, have developed morphological and physiological responses, notably an increase in rhizosphere acidification (H⁺-ATPase) and an enhanced plasma membrane ferric chelate reductase activity (Fe-CR) in the roots. However, studies on the physiological responses of root nodules are lacking. The present study was initiated to investigate the acidification capacity and Fe-CR activity of nodulated roots, and intact nodules, in two contrasting common bean varieties, Coco blanc sensitive to iron deficiency and Flamingo tolerant to iron deficiency. The discovery of an induction of H⁺-ATPase and Fe-CR activities in root nodules of commonbean under iron deficiency, suggests that these organs participate in improving iron availability for the contained bacteroids.     

Effects of elevated atmospheric carbon dioxide on amino acid and NH4+-N cycling in a temperate pine ecosystem

Rising atmospheric carbon dioxide (CO₂) is expected to increase forest productivity, resulting in greater carbon (C) storage in forest ecosystems. Because elevated atmospheric CO₂ does not increase nitrogen (N) use efficiency in many forest tree species, additional N inputs will be required to sustain increased net primary productivity (NPP) under elevated atmospheric CO₂. We investigated the importance of free amino acids (AAs) as a source for forest N uptake at the Duke Forest Free Air CO₂ Enrichment (FACE) site, comparing its importance with that of better‐studied inorganic N sources. Potential proteolytic enzyme activity was monitored seasonally, and individual AA concentrations were measured in organic horizon extracts. Potential free AA production in soils ranged from 190 to 690 nmol N g⁻¹ h⁻¹ and was greater than potential rates of soil NH₄⁺ production. Because of this high potential rate of organic N production, we determined (1) whether intact AA uptake occurs by Pinus taeda L., the dominant tree species at the FACE site, (2) if the rate of cycling of AAs is comparable with that of ammonium (NH₄⁺), and (3) if atmospheric CO₂ concentration alters the aforementioned N cycling processes. A field experiment using universally labeled ammonium (¹⁵NH₄⁺) and alanine (¹³C₃H₇¹⁵NO₂) demonstrated that ¹⁵N is more readily taken up by plants and heterotrophic microorganisms as NH₄⁺. Pine roots and microbes take up on average 2.4 and two times as much NH₄^{+ 15}N compared with alanine ¹⁵N 1 week after tracer application. N cycling through soil pools was similar for alanine and NH₄⁺, with the greatest ¹⁵N tracer recovery in soil organic matter, followed by microbial biomass, dissolved organic N, extractable NH₄⁺, and fine roots. Stoichiometric analyses of ¹³C and ¹⁵N uptake demonstrated that both plants and soil microorganisms take up alanine directly, with a ¹³C : ¹⁵N ratio of 3.3 : 1 in fine roots and 1.5 : 1 in microbial biomass. Our results suggest that intact AA (alanine) uptake contributes substantially to plant N uptake in loblolly pine forests. However, we found no evidence supporting increased recovery of free AAs in fine roots under elevated CO₂, suggesting plants will need to acquire additional N via other mechanisms, such as increased root exploration or increased N use efficiency.     

Effects of soil pH and nitrogen fertility on the population dynamics of Thielaviopsis basicola

Black root rot of tobacco, caused by Thielaviopsis basicola, is generally severe at soil pH values >5.6 and suppressed under more acidic conditions (pH < 5.2). Soil acidifying fertilizers containing NH₄–N are generally recommended for burley tobacco production in North Carolina, but the effects of N form and application rate on development of black root rot and on the population dynamics of T. basicola have not been determined. Greenhouse and laboratory studies were conducted to evaluate the effects of N form (NH₄ ⁺ or NO₃ ^–) and rate on pathogen and disease parameters at several initial soil pH levels. A moderately-conducive field soil, initial pH 4.7, was adjusted to a pH of 5.5 or 6.5 by the addition of CaOH₂, then amended with the desired nitrogen form and rate. Pathogen populations were determined over time. In addition, spore production in extracts of roots from plants grown in the various nitrogen and pH treatments was determined. Finally, because tobacco responds to acidic soil conditions and exposure to NH₄–N by accumulating high concentrations of the polyamine putrescine, the toxicity of putrescine on vegetative growth and reproduction of T. basicola was investigated. Low soil pH and high levels of NH₄–N suppressed reproduction of T. basicola in soil and in root extract, while use of NO₃–N and depletion of NH₄–N resulted in rapid increases in populations of T. basicola. At 20 mM, putrescine inhibited hyphal growth by 60% and aleuriospore production by 98%. Fertilizers that reduced soil pH also reduced reproduction by T. basicola, and thus have potential for management of black root rot by suppressing populations of T. basicola over multiple years of crop production. The suppression of T. basicola and black root rot observed with NH₄–N amendments may partially be due to development of an inhibitory environment in the root and not solely to changes in rhizosphere pH.