植物纤维素合成酶基因和纤维素的生物合成

纤维素地球上最丰富的生物大分子和最重要的可再生资源,1996年克隆了第一个植物纤维素合成酶基因,植物纤维素的生物合成需要多个纤维素合成酶与其他相关酶如Korrigan纤维素酶,蔗糖合成酶等来共同完成。本文介绍了植物纤维素合成酶基因和纤维素的生物合成途径及其相关基因如蔗糖合成酶基因、KORRIG-AN基因等研究进展。     

KORRIGAN1 Interacts Specifically with Integral Components of the Cellulose Synthase Machinery

Cellulose is synthesized by the so called rosette protein complex and the catalytic subunits of this complex are the cellulose synthases (CESAs). It is thought that the rosette complexes in the primary and secondary cell walls each contains at least three different non-redundant cellulose synthases. In addition to the CESA proteins, cellulose biosynthesis almost certainly requires the action of other proteins, although few have been identified and little is known about the biochemical role of those that have been identified. One of these proteins is KORRIGAN (KOR1). Mutant analysis of this protein in Arabidopsis thaliana showed altered cellulose content in both the primary and secondary cell wall. KOR1 is thought to be required for cellulose synthesis acting as a cellulase at the plasma membrane–cell wall interface. KOR1 has recently been shown to interact with the primary cellulose synthase rosette complex however direct interaction with that of the secondary cell wall has never been demonstrated. Using various methods, both in vitro and in planta, it was shown that KOR1 interacts specifically with only two of the secondary CESA proteins. The KOR1 protein domain(s) involved in the interaction with the CESA proteins were also identified by analyzing the interaction of truncated forms of KOR1 with CESA proteins. The KOR1 transmembrane domain has shown to be required for the interaction between KOR1 and the different CESAs, as well as for higher oligomer formation of KOR1.     

植物纤维素合酶基因研究进展

纤维素合酶催化合成的β_1,4糖苷链构成植物细胞壁中含量最丰富的组份纤维素。植物体中存在着众多纤维素合酶,同时还具多种与之相关的纤维素合酶相似蛋白,它们组成了一个庞大的纤维素合酶超家族。纤维素合酶的催化机理尚不清楚,纤维素合酶相似蛋白的功能更有待于深入研究。本文综述了近年植物纤维素合酶及其相似蛋白编码基因的研究进展。     

植物纤维素合酶基因研究进展

纤维素合酶催化合成的 β_1 ,4糖苷链构成植物细胞壁中含量最丰富的组份纤维素。植物体中存在着众多纤维素合酶 ,同时还具多种与之相关的纤维素合酶相似蛋白 ,它们组成了一个庞大的纤维素合酶超家族。纤维素合酶的催化机理尚不清楚 ,纤维素合酶相似蛋白的功能更有待于深入研究。本文综述了近年植物纤维素合酶及其相似蛋白编码基因的研究进展。     

The Cellulase KORRIGAN Is Part of the Cellulose Synthase Complex

Plant growth and organ formation depend on the oriented deposition of load-bearing cellulose microfibrils in the cell wall. Cellulose is synthesized by a large relative molecular weight cellulose synthase complex (CSC), which comprises at least three distinct cellulose synthases. Cellulose synthesis in plants or bacteria also requires the activity of an endo-1,4-β-d-glucanase, the exact function of which in the synthesis process is not known. Here, we show, to our knowledge for the first time, that a leaky mutation in the Arabidopsis (Arabidopsis thaliana) membrane-bound endo-1,4-β-d-glucanase KORRIGAN1 (KOR1) not only caused reduced CSC movement in the plasma membrane but also a reduced cellulose synthesis inhibitor-induced accumulation of CSCs in intracellular compartments. This suggests a role for KOR1 both in the synthesis of cellulose microfibrils and in the intracellular trafficking of CSCs. Next, we used a multidisciplinary approach, including live cell imaging, gel filtration chromatography analysis, split ubiquitin assays in yeast (Saccharomyces cerevisiae NMY51), and bimolecular fluorescence complementation, to show that, in contrast to previous observations, KOR1 is an integral part of the primary cell wall CSC in the plasma membrane.Cellulose microfibrils are synthesized by a hexameric multiprotein complex at the plasma membrane called the cellulose synthase complex (CSC). Genetic analysis, expression data, and coimmunoprecipitation experiments have demonstrated that a functional CSC contains at least three different nonredundant cellulose synthase (CESA) isoforms (Höfte et al., 2007). CESA1, CESA3, and CESA6-like are involved in cellulose biosynthesis during primary cell wall deposition, whereas CESA4, CESA7, and CESA8 are essential for cellulose synthesis in the secondary cell wall (Taylor et al., 1999, 2000, 2003; Desprez et al., 2007; Persson et al., 2007). CSCs labeled by fluorescently tagged CESA proteins migrate in the plasma membrane along cortical microtubules (CMTs), propelled by the polymerization of the β-1,4-glucans (Paredez et al., 2006). Partial depolymerization of CMTs using oryzalin showed that the organized trajectories of CSCs depend on the presence of an intact CMT array. The CSC-microtubule interaction is mediated at least in part by a large protein, POMPOM2/CELLULOSE SYNTHASE INTERACTING1, that binds to both CESAs and microtubules (Lei et al., 2014). Interestingly, complete depolymerization of CMTs does not alter the velocity of the complexes, illustrating that CMTs are necessary for the guidance of CSCs but not for their movement (Paredez et al., 2006). The microtubule cytoskeleton also has a role in the secretion and internalization of CSCs (Crowell et al., 2009; Gutierrez et al., 2009)KORRIGAN1 (KOR1) is a membrane-bound endo-1,4-β-d-glucanase (EGase) that is also required for cellulose synthesis (Nicol et al., 1998). Enzymatic analysis of a recombinant and soluble form of the Brassica napus KOR1 homolog showed substrate specificity for low-substituted carboxymethyl cellulose and amorphous cellulose but no activity on crystalline cellulose, xyloglucans, or short cellulose oligomers (Mølhøj et al., 2001; Master et al., 2004). Fractionation of microsomes demonstrated that KOR1 is primarily present in plasma membrane fractions but also at low levels in a tonoplast-enriched fraction (Nicol et al., 1998). Similarly, the KOR1 ortholog from tomato (Solanum lycopersicum) was found in the plasma membrane and fractions enriched for the Golgi apparatus (Brummell et al., 1997). A GFP-KOR1 fusion protein expressed with the Cauliflower mosaic virus 35S promoter accumulated in the Golgi apparatus and post-Golgi compartments and the tonoplast (Robert et al., 2005). Surprisingly for an enzyme involved in cellulose synthesis, the protein could not be detected at the plasma membrane. Using this construct, it was also shown that KOR1 undergoes regulated intracellular cycling (Robert et al., 2005).Although numerous genetic studies indicate that KOR1 is required for cellulose synthesis in primary and secondary cell walls and during cell plate formation (Nicol et al., 1998; Peng et al., 2000; Zuo et al., 2000; Lane et al., 2001; Sato et al., 2001; Szyjanowicz et al., 2004), its precise role in the cellulose synthesis process remains unclear. It has been suggested that KOR1 might be a component of the CSC (Read and Bacic, 2002). However, until now there has been no experimental evidence for this in Arabidopsis (Arabidopsis thaliana), either with coprecipitation experiments or with localization studies (Szyjanowicz et al., 2004; Robert et al., 2005; Desprez et al., 2007). Numerous hypotheses have been proposed to explain the paradoxical role of KOR1 in cellulose synthesis (Robert et al., 2004). KOR1 might have a proofreading activity involved in hydrolyzing disordered amorphous cellulose to relieve stress generated during the assembly of glucan chains in cellulose microfibrils (Mølhøj et al., 2002). Alternatively, KOR1 may determine the length of individual cellulose chains, either during cellulose synthesis or once the microfibril has been incorporated in the wall. A third hypothesis is that KOR1 releases the cellulose microfibril from the CSC before the complex is internalized from the plasma membrane (Somerville, 2006). Studies in cotton (Gossypium hirsutum) fiber extracts identified sitosterol glucoside as a primer for the cellulose synthesis and suggested that KOR1 could be involved in their cleavage from the nascent glucan chain (Peng et al., 2002). However, this scenario is unlikely, since, at least for the bacterial CESA, which is homologous to plant CESAs, there is no evidence for the existence of lipid-linked precursors, as shown by the three-dimensional structure of an active complex (Morgan et al., 2013).In this study, we first confirmed previous observations (Paredez et al., 2008) that, in the leaky kor1-1 mutant, the velocity of the CSCs is reduced compared with that in a wild-type background but that, in addition, the mutation affects the ability of the cellulose synthesis inhibitor CGA325′615 (hereafter referred to as CGA) to induce the accumulation of GFP-CESA3 in a microtubule-associated compartment (MASC/small compartments carrying cellulose synthase complexes [SmaCCs]; Crowell et al., 2009; Gutierrez et al., 2009). This indicates that KOR1 plays a role both in the synthesis of cellulose and in the intracellular trafficking of the CSC. Using gel filtration approaches, we identified KOR1 in fractions of high molecular mass, suggesting that KOR1 is present in membranes as part of a protein complex. We next analyzed the dynamics of GFP-KOR1 expressed in the kor1-1 mutant background under the control of its endogenous promoter. GFP-KOR1 is found in discrete particles at the plasma membrane in the same cells as GFP-CESAs (Crowell et al., 2009). GFP-KOR1 plasma membrane particles migrate along linear trajectories with comparable velocities to those observed for GFP-CESAs. The organization of GFP-KOR1 at the plasma membrane also requires the presence of an intact microtubule array, suggesting that KOR1 and CESA trajectories in the plasma membrane are regulated in the same manner. GFP-KOR1 and mCherry-CESA1 partially colocalize in the plasma membrane, Golgi, and post-Golgi compartments. Finally, we provide evidence for direct interaction between KOR1 and primary cell wall CESA proteins using the membrane-based yeast (Saccharomyces cerevisiae NMY51) two-hybrid (MbYTH) system (Timmers et al., 2009) and bimolecular fluorescence complementation (BiFC). Our data support a new model in which KOR1 is an integral part of the CSC, where it plays a role not only in the synthesis of cellulose but also in the intracellular trafficking of the CSC.     

利用全测序基因组数据对被子植物纤维素合成酶基因的进化分析

利用已经分离的植物纤维素合成酶基因的Cellulose_synt结构域为检索序列,从NCBI和其他数据库中调取已完成测序的物种的纤维素合成酶的氨基酸序列,共涉及10个物种的171个基因,基于以上氨基酸序列,应用MEGA4.0生成系统进化树。结果表明:CesA基因和Csl基因直向的相似度远大于平行的相似度,且它们的分化可能在单子叶和真双子叶植物分化之前,单子叶和真双子叶植物的最近共同祖先中至少存在7个CesA基因,综合已知的模式植物CesA基因的功能(初生壁或次生壁形成特异性),可为推测其他物种中该基因的功能提供帮助。     

Evolutionary Dynamics of the Cellulose Synthase Gene Superfamily in Grasses

Phylogenetic analyses of cellulose synthase (CesA) and cellulose synthase-like (Csl) families from the cellulose synthase gene superfamily were used to reconstruct their evolutionary origins and selection histories. Counterintuitively, genes encoding primary cell wall CesAs have undergone extensive expansion and diversification following an ancestral duplication from a secondary cell wall-associated CesA. Selection pressure across entire CesA and Csl clades appears to be low, but this conceals considerable variation within individual clades. Genes in the CslF clade are of particular interest because some mediate the synthesis of (1,3;1,4)-β-glucan, a polysaccharide characteristic of the evolutionarily successful grasses that is not widely distributed elsewhere in the plant kingdom. The phylogeny suggests that duplication of either CslF6 and/or CslF7 produced the ancestor of a highly conserved cluster of CslF genes that remain located in syntenic regions of all the grass genomes examined. A CslF6-specific insert encoding approximately 55 amino acid residues has subsequently been incorporated into the gene, or possibly lost from other CslFs, and the CslF7 clade has undergone a significant long-term shift in selection pressure. Homology modeling and molecular dynamics of the CslF6 protein were used to define the three-dimensional dispositions of individual amino acids that are subject to strong ongoing selection, together with the position of the conserved 55-amino acid insert that is known to influence the amounts and fine structures of (1,3;1,4)-β-glucans synthesized. These wall polysaccharides are attracting renewed interest because of their central roles as sources of dietary fiber in human health and for the generation of renewable liquid biofuels.Recent attempts to better understand the chemistry and biology of plant cell walls have been driven by the importance of these walls as biomass sources for biofuel production systems, as sources of dietary fiber that is increasingly recognized as being highly beneficial for human health, and as key components of livestock forage and fodder. Plant cell walls consist predominantly of polysaccharides and lignin. In addition to cellulose, walls contain a wide array of complex noncellulosic polysaccharides that vary across the plant kingdom (Carpita, 1996; Popper and Fry, 2003; Niklas, 2004; Popper and Tuohy, 2010). In the dicotyledons, pectic polysaccharides and xyloglucans predominate, although smaller amounts of heteroxylans and heteromannans are also found. In evolutionary terms, a major change in noncellulosic wall composition is observed with the emergence of the Poaceae family, which contains the grasses and important cereal species. In contrast to dicots, walls of the Poaceae have relatively low levels of pectic polysaccharides and xyloglucans and correspondingly higher levels of heteroxylans, which appear to constitute the core noncellulosic wall polysaccharides in this family. In addition, walls of the Poaceae often contain (1,3;1,4)-β-glucans, which are not widely distributed in dicotyledons or other monocotyledons (Carpita, 1996; Fincher, 2009).Following the identification of the genes that encode cellulose synthases, which were designated CesA genes (Pear et al., 1996; Arioli et al., 1998), analyses of EST databases quickly revealed that the CesA group of cellulose synthase genes was in fact just one clade of a much larger superfamily that contained up to about 50 genes in most land plants (Richmond and Somerville, 2000; Hazen et al., 2002). The other members of the large gene family were designated cellulose synthase-like genes (Csl), which represent several clades in the overall phylogeny of the superfamily (Supplemental Fig. S1). The plant CesA genes were shown to have both conserved and hypervariable regions (Delmer, 1999; Doblin et al., 2002) and, together with the related Csl genes, were predicted to be integral membrane proteins and to have conserved, active-site D,D,D,QxxRW amino acid sequences. The CesA and Csl genes are members of the GT2 family of glycosyltransferases (Cantarel et al., 2009; http://www.cazy.org/).Several of the Csl genes have now been implicated in the biosynthesis of noncellulosic wall polysaccharides. Certain CslA genes mediate mannan and glucomannan synthesis (Dhugga et al., 2004; Liepman et al., 2005). Genes in the CslC clade are believed to be involved in xyloglucan biosynthesis (Cocuron et al., 2007), while genes from both the CslF and CslH clades mediate (1,3;1,4)-β-glucan synthesis in the Poaceae (Burton et al., 2006; Doblin et al., 2009). The CslJ group of enzymes is also believed to be involved in (1,3;1,4)-β-glucan synthesis (Farrokhi et al., 2006; Fincher, 2009), but the phylogeny of this group of genes remains unresolved (Yin et al., 2009). The fact that the CslF group does not form a clade with the CslH and CslJ groups on the phylogenetic tree (Supplemental Fig. S1) led to the suggestion that the genes mediating (1,3;1,4)-β-glucan synthesis have evolved independently on more than one occasion (Doblin et al., 2009; Fincher, 2009).Against this background and considering the sequence similarities between genes in the cellulose synthase gene superfamily, we have used Bayesian phylogenetic analyses of these genes from seven fully sequenced taxa to reconstruct the evolutionary origins of the CesA and Csl families in the grasses and, in particular, to investigate the evolution of the CslF, CslH, and CslJ genes. The distributions of the genes across genomes were compared, CslF gene clusters were analyzed, and the rates of synonymous and nonsynonymous nucleotide substitution were estimated to assess and compare selection histories of individual members of clades within the gene superfamily. Finally, we have constructed a refined model of the barley CslF6 enzyme to observe how selection on specific residues and regions of the enzyme has operated in a structural and functional context.     

Down-Regulation of Cellulose Synthase Inhibits the Formation of Endocysts in Acanthamoeba

Acanthamoeba cysts are resistant to unfavorable physiological conditions and various disinfectants. Acanthamoeba cysts have 2 walls containing various sugar moieties, and in particular, one third of the inner wall is composed of cellulose. In this study, it has been shown that down-regulation of cellulose synthase by small interfering RNA (siRNA) significantly inhibits the formation of mature Acanthamoeba castellanii cysts. Calcofluor white staining and transmission electron microscopy revealed that siRNA transfected amoeba failed to form an inner wall during encystation and thus are likely to be more vulnerable. In addition, the expression of xylose isomerase, which is involved in cyst wall formation, was not altered in cellulose synthase down-regulated amoeba, indicating that cellulose synthase is a crucial factor for inner wall formation by Acanthamoeba during encystation.     

植物纤维素合成酶基因的研究进展

纤维素是植物细胞壁的主要成分。自然界中每年大约有1800亿吨的纤维素产物生成。纤维素的巨大经济价值使纤维素合成酶基因成为基因工程的热点之一。1996年, Delmer小组首次从植物中克隆出纤维素合成酶基因。近年来,在纤维素合成酶的结构、功能、定位和基因功能的研究方面成果斐然。本文概述了植物纤维素合成酶基因的研究进展。 Abstract:Cellulose is a major component in plant cell wall.About 180 billion tons of cellulose are produced per year in nature.The commercial importance of cellulose makes the genes coding it one of attractive targets for plant genetic engineering.A number of cellulose synthase genes have been first cloned from plant species by Delmer's group in 1996.Recently,research achievement has been obtained in accumulating to understanding the cellulose synthase function,location,and the gene function.The paper summarized the research progress of cellulose synthase genes in higher plants.     

高等植物纤维素合酶超家族

从1996年第一个植物纤维素合酶基因的鉴定,人们对植物体内纤维素合成的研究已经走过了10年的历程。10多年中,人们取得了很大的成果,也有很多问题有待解决。该文主要介绍拟南芥和毛果杨基因组中的纤维素合酶超家族。     

SHOU4 Proteins Regulate Trafficking of Cellulose Synthase Complexes to the Plasma Membrane

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CELLULOSE SYNTHASE INTERACTIVE1 Is Required for Fast Recycling of Cellulose Synthase Complexes to the Plasma Membrane in Arabidopsis

Plants are constantly subjected to various biotic and abiotic stresses and have evolved complex strategies to cope with these stresses. For example, plant cells endocytose plasma membrane material under stress and subsequently recycle it back when the stress conditions are relieved. Cellulose biosynthesis is a tightly regulated process that is performed by plasma membrane-localized cellulose synthase (CESA) complexes (CSCs). However, the regulatory mechanism of cellulose biosynthesis under abiotic stress has not been well explored. In this study, we show that small CESA compartments (SmaCCs) or microtubule-associated cellulose synthase compartments (MASCs) are critical for fast recovery of CSCs to the plasma membrane after stress is relieved in Arabidopsis thaliana. This SmaCC/MASC-mediated fast recovery of CSCs is dependent on CELLULOSE SYNTHASE INTERACTIVE1 (CSI1), a protein previously known to represent the link between CSCs and cortical microtubules. Independently, AP2M, a core component in clathrin-mediated endocytosis, plays a role in the formation of SmaCCs/MASCs. Together, our study establishes a model in which CSI1-dependent SmaCCs/MASCs are formed through a process that involves endocytosis, which represents an important mechanism for plants to quickly regulate cellulose synthesis under abiotic stress.     

Interaction between Autonomous and Microtubule Guidance Systems Controls Cellulose Synthase Trajectories

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毛白杨纤维素合成酶基因（PtoCesA1）克隆及正义植物表达载体的构建

以毛白杨形成层为材料克隆了毛白杨纤维素合成酶基因（PtoCesA1）,序列分析表明该基因序列为3215bp, 与欧洲颤杨的PtCesA1基因同源性为97% 具有开放的阅读框,编码区在52~2985碱基之间,编码区为2925bp。通过同义突变引入BamHI酶切位点,将全长基因克隆到植物表达载体pBI121中,经酶切和PCR鉴定确认载体构建正确,为下一步ptoCesA1转基因功能研究打下了基础。