Tyrosine metabolic enzymes from insects and mammals：A comparative perspective

Differences in the metabolism of tyrosine between insects and mammals present an interesting example of molecular evolution. Both insects and mammals possess finetuned systems of enzymes to meet their specific demands for tyrosine metabolites; however, more homologous enzymes involved in tyrosine metabolism have emerged in many insect species. Without knowledge of modem genomics, one might suppose that mammals, which are generally more complex than insects and require tyrosine as a precur sor for important catecholamine neurotransmitters and for melanin, should possess more enzymes to control tyrosine metabolism. Therefore, the question of why insects actually possess more tyrosine metabolic enzymes is quite interesting. It has long been known that insects rely heavily on tyrosine metabolism for cuticle hardening and for innate immune responses, and these evolutionary constraints are likely the key answers to this question. In terms of melanogenesis, mammals also possess a high level of regulation; yet mam malian systems possess more mechanisms for detoxification whereas insects accelerate pathways like melanogenesis and therefore must bear increased oxidative pressure. Our research group has had the opportunity to characterize the structure and function of many key proteins involved in tyrosine metabolism from both insects and mammals. In this mini review we will give a brief overview of our research on tyrosine metabolic enzymes in the scope of an evolutionary perspective of mammals in comparison to insects.     

Fine-scale population genetic structure in a fission-fusion society

Nonrandom patterns of mating and dispersal create fine-scale genetic structure in natural populations — especially of social mammals — with important evolutionary and conservation genetic consequences. Such structure is well-characterized for typical mammalian societies; that is, societies where social group composition is stable, dispersal is male-biased, and males form permanent breeding associations in just one or a few social groups over the course of their lives. However, genetic structure is not well understood for social mammals that differ from this pattern, including elephants. In elephant societies, social groups fission and fuse, and males never form permanent breeding associations with female groups. Here, we combine 33 years of behavioural observations with genetic information for 545 African elephants ( Loxodonta africana ), to investigate how mating and dispersal behaviours structure genetic variation between social groups and across age classes. We found that, like most social mammals, female matrilocality in elephants creates co-ancestry within core social groups and significant genetic differentiation between groups (Φ_ST = 0.058). However, unlike typical social mammals, male elephants do not bias reproduction towards a limited subset of social groups, and instead breed randomly across the population. As a result, reproductively dominant males mediate gene flow between core groups, which creates cohorts of similar-aged paternal relatives across the population. Because poaching tends to eliminate the oldest elephants from populations, illegal hunting and poaching are likely to erode fine-scale genetic structure. We discuss our results and their evolutionary and conservation genetic implications in the context of other social mammals.     

An experimental study of body size and food size relations in crucian carp,Carassius carassius

Synopsis In dense, single-species assemblages of crucian carp, competition is intense and results in populations of stunted fish. To explore mechanisms underlying this competition, we measured handling times, return rates, and prey choice for five sizes of crucian carp feeding on six sizes of a standardized food. Handling times increased with prey size and decreased with fish size. Return rates (dry mass ingested per unit handling time) increased dramatically with fish size, and generally decreased with increasing prey size, especially for small fish. Patterns of return rates among size-classes suggested that one or more size-related shifts in feeding efficiency exist for crucian carp; combined with physiological stresses related to winter anoxia, the inability of fish to make these shifts may contribute to size structures observed in high-density populations. Comparisons of relations among fish size, prey size, and return rates for crucian carp and bluegill, Lepomis macrochirus, suggest that similar intraspecific competitive relations exist between generalist species with size-structured populations. Despite differences in return rates among prey sizes, the extent of food selectivity based on prey size exhibited by crucian carp in two types of choice trials was less than predicted. Crucian carp commonly take in several items before mechanically processing food with their pharyngeal apparatus; this multiple prey processing may contribute to disparities between observed choice patterns and those predicted based on return rates for single prey.     

Drosophyllum lusitanicum, an endangered West Mediterranean endemic carnivorous plant: threats and its ability to control available resources

Drosophyllum lusitanicum (L.) Link (Droseraceae), Erva pinheira orvalhada, an endangered carnivorous plant, is a local endemic of clearings in pine, cork oak and oak forests or their successional shrublands in the western Iberian Peninsula and Morocco. The conservation status, distribution and population dynamics of this species are only partially known, both for Spanish and Portuguese occurrences. Portuguese distribution data from herbarium and bibliographic sources were collected for this study. Field work on 50 populations was undertaken in order to improve knowledge on their conservation status and possible threats. Natural causes, infrastructure and housing construction are stressed as the most important threats. Germination tests were carried out and the distribution patterns, plant height and the number of flowers were studied in an arbitrarily chosen population. A relatively high light requirement and low competitive ability to gain light are considered factors likely for the microdistribution pattern. Drosophyllum lusitanicum cannot compete for light in habitats with intense competition. Seeds from D. lusitanicum have reduced probability of germination when adult plants are already growing in the area. It is hypothesized that seed germination shows a similar pattern to flowering, viz over a considerable time rather than in a sudden flush. This strategy may be a key factor for the species' survival, representing attempts to take advantage of available resources, preventing intraspecific competition and, finally, preventing sudden total disappearance of a population, resulting from any catastrophic events due to natural causes or to human activity. As a result of this study, some conservation measures are suggested.   © The Linnean Society of London, Botanical Journal of the Linnean Society , 2002, 140 , 383–390.     

Population genetics of a marine bivalve, Pinctada maxima, throughout the Indo-Australian Archipelago shows differentiation and decreased diversity at range limits

Intraspecific genetic diversity governs the potential of species to prevail in the face of environmental or ecological challenges; therefore, its protection is critical. The Indo-Australian Archipelago (IAA) is a significant reservoir of the world's marine biodiversity and a region of high conservation priority. Yet, despite indications that the IAA may harbour greater intraspecific variation, multiple-locus genetic diversity data are limited. We investigated microsatellite DNA variation in Pinctada maxima populations from the IAA to elucidate potential factors influencing levels of genetic diversity in the region. Results indicate that genetic diversity decreases as the geographical distance away from central Indonesia increases, and that populations located towards the centre of P. maxima 's range are more genetically diverse than those located peripherally ( P <  0.01). Significant partitioning of genetic variation was identified ( F _ST = 0.027; R _ST = 0.023, P  < 0.001) and indicates that historical biogeographical episodes or oceanographic factors have shaped present population genetic structure. We propose that the genetic diversity peak in P. maxima populations may be due to (i) an abundance of suitable habitat within the IAA, meaning larger, more temporally stable populations can be maintained and are less likely to encounter genetic bottlenecks; and/or (ii) the close proximity of biogeographical barriers around central Indonesia results in increased genetic diversity in the region because of admixture of genetically divergent populations. We encourage further genetic diversity studies of IAA marine biota to confirm whether this region has a significant role in maintaining intraspecific diversity, which will greatly assist the planning and efficacy of future conservation efforts.     

Population ecology of the endangered aquatic carnivorous macrophyte Aldrovanda vesiculosa at a naturalised site in North America

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The applicability of metapopulation theory to large mammals

Metapopulation theory has become a common framework in conservation biology and it is sometimes suggested that a metapopulation approach should be used for management of large mammals. However, it has also been suggested that metapopulation theory would not be applicable to species with long generations compared to those with short ones. In this paper, we review how and on what empirical ground metapopulation terminology has been applied to insects, small mammals and large mammals. The review showed that the metapopulation term sometimes was used for population networks which only fulfilled the broadest possible definition of a metapopulation, i.e. they were subpopulations connected by migrating individuals. We argue that the metapopulation concept should be reserved for networks that also show some kind of metapopulation dynamics. Otherwise it applies to almost all populations and loses its substance. We found much empirical support for metapopulation dynamics in both insects and small mammals, but not in large mammals. A possible reason is the methods used to confirm the existence of metapopulation dynamics. For insects and small mammals, the common approach is to study population turnover through patch occupancy data. Such data is difficult to obtain for large mammals, since longer temporal scales need to be covered to record extinctions and colonizations. Still, many populations of large mammals are exposed to habitat fragmentation and the resulting subpopulations sometimes have high risks of extinction. If there is migration between the subpopulations, the metapopulation framework could provide valuable information on their population dynamics. We suggest that a metapopulation approach can be interesting for populations of large mammals, when there are discrete breeding subpopulations and when these subpopulations have different growth rates and demographic fates. Thus, a comparison of the subpopulations’ demographic fates, rather than subpopulation turnover, can be a feasible alternative for studies of metapopulation dynamics in large mammals.     

Burrow and mate fidelity in the Little Penguin Eudyptula minor at Lion Island, New South Wales, Australia

Although both mate and nest fidelity are thought to exist in Little Penguins Eudyptula minor , few studies have statistically assessed the relationship between both types of fidelity and breeding success. Observations of the breeding biology of the Little Penguin were carried out between 1990 and 1998 at Lion Island, New South Wales, Australia. The existence of fidelity and the effect of breeding success on subsequent fidelity were assessed for this population. Strong evidence for the existence of nest and mate fidelity was found with high rates of return to the same burrow and mate being recorded for both sexes. For all years of the study, the average number of female and male birds faithful to their nest was 76 and 79%, respectively, with only two noted cases of intraseasonal burrow swapping. The rate of divorce varied widely between years, with a range of 0–40%. A marginal association of a log linear model showed a highly significant relationship ( P  < 0.001) between success of a clutch in one year and fidelity to a mate in the following year. Consequently, parents successfully raising a fledgling in one year were more likely to reunite in the following year than were pairs that attempted unsuccessfully to breed. Pairs failing to fledge chicks were much more likely to separate owing to the absence of one parent in the following year. We were unable to detect any association between breeding success in one year and subsequent change of nest in the next.     

Spatial and temporal variation in a suite of life-history traits in two species of wolf spider

Abstract.  1. Life-history traits and density were assayed in seven populations of two sympatric species of wolf spider for three consecutive years. The goal of the study was to quantify population dynamics and its relation to spatial and temporal life-history variation.
2. Adult female body size and fecundity varied significantly, among field sites and among years, in both species. Female spiders of both species differed in mean relative reproductive effort among sites, but not among years. The size of offspring was invariable, with no significant differences due to site or year.
3. All populations of both species tended to either decrease or increase in density during a given year and this was tightly correlated with changes in prey consumption rates.
4. Since life-history patterns are determined primarily by selection, it is concluded that size at sexual maturity for females is phenotypically plastic and responds to changes in prey availability. Offspring size however is not plastic and it is likely that other selection forces have determined offspring size. Temporal fluctuations in population size are correlated over a large area relative to dispersal capabilities for these species and conservation efforts for invertebrates must take this into consideration.     

Birds associated with a tailings storage facility and surrounding areas from a South African gold mine

As part of the 'International Cyanide management code for the manufacture, transport, and use of cyanide in the production of gold', companies voluntarily commit towards keeping the weak-acid-dissociable (WAD) cyanide concentrations in tailings below 50 mg l⁻¹. Day and night-time observations were made in winter at the tailings storage facility (TSF) of the Mponeng mine of AngloGold Ashanti, and extensive surveys of the surroundings were made for mortalities. The cyanide levels never exceeded 50 mg l⁻¹ WAD. No dead birds or mammals were found. Twenty-five bird species were recorded in and around the TSF and the associated return water dams (RWDs), with 20 occurring only in the surrounding grasslands or RWDs, and five (four wader species and a sand martin) on the TSF. The wading birds were most likely feeding on dead insects from the pond surface, as they adjusted their locations according to wind direction. Other birds actively avoided the TSF water, suggesting a locally learned behaviour. Whether this avoidance will also hold for migratory birds or natal dispersal of local birds in summer necessitates further investigation. A better understanding of the TSF–wildlife interactions would lead to improved measures to reduce environmental risks.     

Identifying multiscale habitat factors influencing koala (Phascolarctos cinereus) occurrence and management in Ballarat, Victoria, Australia

Summary   Modelling for the conservation of koala ( Phascolarctos cinereus ) populations has primarily focused on natural habitat variables (e.g. tree species, soil types and soil moisture). Until recently, limited consideration has been given to modelling the effects of the landscape context (e.g. habitat area, habitat configuration and roads). Yet, the combined influence of natural habitats and anthropogenic impacts at multiple spatial scales are likely to be important determinants of where koala populations occur and remain viable in human-modified landscapes. The study tested the importance of multiscale habitat variables on koala occurrence in Ballarat, Victoria, Australia. The models focused at three spatial scales: site ( <  1 ha), patch (1–100 ha), and landscape (100–1000 s ha). Logistic regression and hierarchical partitioning analyses were used to rank alternative models and key explanatory variables.
The results showed that an increased likelihood of koala presence in fragmented landscapes in the urban–forest interface (as opposed to larger blocks of forest habitat) can best be explained by the positive effects of soil fertility and the presence of preferred koala tree species in these fragmented areas. If koalas are to be effectively conserved in Ballarat, it is critical to (i) protect remaining core areas of high-quality habitat, including regenerating areas; (ii) protect scattered habitat patches which provide connectivity; and (iii) develop and implement habitat restoration programmes to improve habitat connectivity and enhance opportunities for safe koala movement between habitat patches intersected by main roads.     

Demographic effects of road mortality on mammalian populations: a systematic review

In light of rapidly expanding road networks worldwide, there is increasing global awareness of the growing amount of mammalian roadkill. However, the ways in which road mortality affects the population dynamics of different species remains largely unclear. We aimed to categorise the demographic parameters in mammalian populations around the world that are directly or indirectly affected by road mortality, as well as identify the most effective study designs for quantifying population-level consequences of road mortality. We conducted a comprehensive systematic review to synthesise literature published between 2000 and 2021 and out of 11,238 unique studies returned, 83 studies were retained comprising 69 mammalian species and 150 populations. A bias towards research-intensive countries and larger mammals was apparent. Although searches were conducted in five languages, all studies meeting the inclusion criteria were in English. Relatively few studies (13.3%) provided relevant demographic context to roadkill figures, hampering understanding of the impacts on population persistence. We categorised five direct demographic parameters affected by road mortality: sex- and age-biased mortality, the percentage of a population killed on roads per year (values up to 50% were reported), the contribution of roadkill to total mortality rates (up to 80%), and roadkill during inter-patch or long-distance movements. Female-biased mortality may be more prevalent than previously recognised and is likely to be critical to population dynamics. Roadkill was the greatest source of mortality for 28% of studied populations and both additive and compensatory mechanisms to roadkill were found to occur, bringing varied challenges to conservation around roads. In addition, intra-specific population differences in demographic effects of road mortality were common. This highlights that the relative importance of road mortality is likely to be context specific as the road configuration and habitat quality surrounding a population can vary. Road ecology studies that collect data on key life parameters, such as age/stage/sex-specific survival and dispersal success, and that use a combination of methods are critical in understanding long-term impacts. Quantifying the demographic impacts of road mortality is an important yet complex consideration for proactive road management.     

Predation, group size and mortality in a cooperative mongoose, Suricata suricatta

1. In social mammals where group members cooperate to detect predators and raise young, members of small groups commonly show higher mortality or lower breeding success than members of large ones. It is generally assumed that this is because large group size allows individuals to detect or repel predators more effectively but other benefits of group size may also be involved, including reduced costs of raising young and more effective competition for resources with neighbouring groups.
2. To investigate the extent to which predation rate affects survival, we compared mortality rates in two populations of suricates ( Suricata suricatta ), one living in an area of high predator density (Kalahari Gemsbok Park) and one living in an area of relatively low predator density (neighbouring ranchland). Most aspects of feeding ecology and growth (including time spent feeding, daily weight gain, growth, adult body weight, breeding frequency and neonatal mortality) were similar in the two populations. In contrast, mortality of animals over 3 months old was 1·7 times higher in the Park than on ranchland.
3. Mortality of juveniles between emergence from the natal burrow and 6 months of age was higher in small groups than large ones in the Park but significantly lower in small groups than large ones on ranchland. Adult mortality declined in larger groups in both areas.
4. The tendency for survival to be low in small groups had far-reaching consequences for the risk of group extinction. During a year of low rainfall in the Park, all groups of less than nine animals became extinct and population density declined to around a third of its initial level. We argue that high group extinction rates are to be expected in species where survival declines in small groups and mortality rates are high.     

Dispersal patterns and population structuring among platypuses, Ornithorhynchus anatinus, throughout south-eastern Australia

Dispersal patterns can have a major impact on the dynamics and viability of populations, and understanding these patterns is crucial to the conservation and management of a species. In this study, patterns of sex-biased dispersal and waterway/overland dispersal are investigated in the endemic Australian platypus, Ornithorhynchus anatinus, a semi-aquatic monotreme. Analyses of over 750 individuals from south-eastern Australia at 13 microsatellite loci and two mitochondrial genes, cytochrome b and cytochrome oxidase subunit II, provide genetic insight into dispersal patterns. For the first time, platypuses of western Victoria are shown to be genetically distinct from other populations of the mainland. Despite distinct morphological differentiation either side of the Great Dividing Range, populations remain genetically similar between coastal and inland areas suggesting gene flow is likely to occur across these ranges. Landscape genetic analyses indicate variability in dispersal patterns between Victorian and Tasmanian platypuses with a greater avoidance of overland travel indicated in Victoria compared to Tasmania. Females appear to remain within their natal area or return to breed, maintaining greater genetic structure in maternally inherited mitochondrial DNA in comparison to nuclear DNA and sharing genetic similarity within a short river distance (i.e. ≤1.4 km). The results of this study provide a valuable spatial framework for the management of wild platypus populations within south-eastern Australia and a baseline for future monitoring of populations that are likely to be impacted by environmental and anthropogenic change.     

Foraging requirements of the endangered long-fingered bat: the influence of micro-habitat structure, water quality and prey type

Myotis capaccinii is one of the most endangered Mediterranean bats. We radio tracked 21 adult individuals to assess foraging range and analyse micro-habitat selection around a nursery roost in central Italy. Habitats were characterized by development of riparian vegetation, distance between banks, degree of water clutter and levels of water pollution (expressed by macro-benthic bioindicators). Diet was also analysed to see whether prey rarity might account for species decline. Myotis capaccinii proved highly mobile: the maximum straight line distance between roost location and the farthest foraging fix recorded on one night was c . 21 km, whereas this variable averaged 7.5 km for the entire study. In general, the species preferred calm waters bordered by well-developed riparian vegetation and large (>5 m) inter-bank distances. Such factors determined the overall quality of foraging sites. Although diet was dominated by pollution-tolerant insects such as Chironomus midges, bats preferred less polluted waters. Our study also confirmed the occurrence of piscivory in this bat. Of the factors potentially responsible for species endangerment, the most likely are general habitat degradation, that is alteration of riparian vegetation and pollution, and cave roost loss. Given the large ecological niche overlap, increasing Myotis daubentonii may be outcompeting M. capaccinii . The most urgent actions to preserve M. capaccinii are extensive restoration of riparian vegetation and strict roost protection. Our study offers indications about where, and how, restoration of riparian vegetation may translate into best conservation results.     

Insects remove more seeds than mammals in first‐year prairie restorations

Seed sowing is a common early step in restoration, but seed consumers can impede plant establishment and alter community structure. Moreover, seed consumers vary in feeding behaviors and the relative importance of different seed consumer groups during restoration are not well understood. At 12 first‐year prairie restorations in Michigan, we studied seed predation using seed removal trays to ask: What is the relative magnitude of seed removal by insects and mammals? Do seed removal rates change over the growing season? Do habitat edges influence seed removal? At what rates are 10 prairie plant species' seeds removed by mammals and insects? Seed removal depended on consumer type, time of year, and seed species. Insects accounted for the majority of seed removal, contrary to previous research in similar systems. In May, insects removed 1.8 times more seeds than mammals, while in August, they removed 5.1 times more. There was greater seed removal in August. During May 28% of seeds were removed, compared to 54% of seeds removed during August, an increase driven by insects. Edge proximity did not influence seed removal. Certain seed species were removed more than others. For example, Lespedeza capitata (round‐headed bush clover) was always removed at high rates, whereas Coreopsis lanceolata (lance‐leaved coreopsis) and Andropogon gerardii (big bluestem) were always removed at low rates. Mammals and insects showed different preferences for several species. This research suggests a prominent role of seed predation, particularly by insects, for early prairie restoration dynamics, with influences varying temporally and among species.     

The ecology of populations of dace, Leudscus leuciscus (L.), from two tributaries of the River Wye, Herefordshire, England

Samples of dace were taken from the Afon Llynfi and the River Lugg each month for 13 consecutive months. Male dace grew faster than females and rates were comparable with those described for several other populations. Variations in year-class strengths were observed and these differed between the populations although 1959 was strongly represented in both. The sex ratio varied throughout life and disturbances in the expected ratio were attributed to the attainment of sexual maturity at the end of the fourth year of life (3+). Observation of the seasonal gonad cycles indicated that spawning occurred in March or April. Fecundity was estimated at about forty eggs per gram of total weight. A seasonal cycle of feeding activity was established with highest food consumption during summer. There was evidence of a fast during the spawning period. No correlation between temperature and feeding activity could be established. Dace were omnivorous, but aquatic insects and algae were the main components of the diet. Seasonal variations generally followed availability. The importance of aerial insects declined with age. Many differences in feeding habits were detected between the populations.     

Who's your daddy? Paternity testing reveals promiscuity and multiple paternity in the carnivorous marsupial Dasyurus maculatus (Marsupialia: Dasyuridae)

Female promiscuity is common among mammals but its advantages, particularly for marsupials, remain unclear. Using microsatellite DNA from pouch young of known mothers, we identified the most likely fathers of 25 wild spotted-tailed quolls ( Dasyurus maculatus ) from six litters. We aimed to determine whether young within the same litter had different fathers, and whether breeding success of males was associated with large body mass (consistent with inter-male competition) or scrotal width (consistent with sperm competition). We also explored the possible influence of promiscuity on relatedness within litters. Finally, we used data on paternity and relatedness to make inferences regarding movement and dispersal.
Four litters were sired by more than one male, and three males sired offspring in more than one litter. Known fathers had higher body mass, but not scrotal width, than males of unknown paternity status, suggesting that males may compete for access to females. Sires were less related to dams than expected by chance, and litters with multiple paternity had lower relatedness than litters sired by a single male.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 96 , 1–7.     

Nest use dynamics of an undisturbed population of bald eagles

Management or conservation targets based on demographic rates should be evaluated within the context of expected population dynamics of the species of interest. Wild populations can experience stable, cyclical, or complex dynamics, therefore undisturbed populations can provide background needed to evaluate programmatic success. Many raptor species have recovered from large declines caused by environmental contaminants, making them strong candidates for ongoing efforts to understand population dynamics and ecosystem processes in response to human‐caused stressors. Dynamic multistate occupancy models are a useful tool for analyzing species dynamics because they leverage the autocorrelation inherent in long‐term monitoring datasets to obtain useful information about the dynamic properties of population or reproductive states. We analyzed a 23‐year bald eagle monitoring dataset in a dynamic multistate occupancy modeling framework to assess long‐term nest occupancy and reproduction in Lake Clark National Park and Preserve, Alaska. We also used a hierarchical generalized linear model to understand changes in nest productivity in relation to environmental factors. Nests were most likely to remain in the same nesting state between years. Most notably, successful nests were likely to remain in use (either occupied or successful) and had a very low probability of transitioning to an unoccupied state in the following year. There was no apparent trend in the proportion of nests used by eagles through time, and the probability that nests transitioned into or out of the successful state was not influenced by temperature or salmon availability. Productivity was constant over the course of the study, although warm April minimum temperatures were associated with increased chick production. Overall our results demonstrate the expected nesting dynamics of a healthy bald eagle population that is largely free of human disturbance and can be used as a baseline for the expected dynamics for recovering bald eagle populations in the contiguous 48 states.