First isolation of an aquatic birnavirus from farmed and wild fish species in Australia

During routine sampling and testing, as part of a systematic surveillance program (the Tasmanian Salmonid Health Surveillance Program), an aquatic birnavirus was isolated from 'pin-head' (fish exhibiting deficient acclimatisation on transfer to saltwater) Atlantic salmon Salmo salar, approximately 18 mo old, farmed in net-pens located in Macquarie Harbour on the west coast of Tasmania, Australia. The isolate grows readily in a range of fish cell lines including CHSE-214, RTG-2 and BF-2 and is neutralised by a pan-specific rabbit antiserum raised against infectious pancreatic necrosis virus (IPNV) Ab strain and by a commercial pan-specific IPNV-neutralising monoclonal antibody. Presence of the virus was not associated with gross clinical signs. Histopathological examination revealed a range of lesions particularly in pancreatic tissue. The virus was localised in pancreas sections by immunoperoxidase staining using the polyclonal antiserum and by electron microscopy. Examination by electron microscopy demonstrated that the virus isolated in cell culture (1) belongs to the family Birnaviridae, genus Aquabirnaviridae; (2) was ultrastructurally and antigenically similar to virus identified in the index fish; (3) is related to IPNV. Western blot analysis using the polyclonal rabbit antiserum confirmed the cross-reactions between various aquatic birnavirus isolates. In addition, PCR analysis of isolated viral nucleic acid from the index case indicated that the virus is more closely related to IPNV fr21 and N1 isolates than to other birnavirus isolates available for comparison. Sampling of other fish species within Macquarie Harbour has demonstrated that the virus is present in several other species of fish including farmed rainbow trout Oncorhynchus mykiss, wild flounder Rhombosolea tapirina, cod Pseudophycis sp., spiked dogfish Squalus megalops and ling Genypterus blacodes.     

The fish fauna of three North African lagoons: specific inventories,ecological status and production

This paper examines the ecological and biological status of fisheries in three coastal lagoons in the southern Mediterranean region: Merja Zerga in Morocco, Ghar El Melh in Tunisia and Lake Manzala in Egypt. Despite similarities in some ecological characteristics, the three lagoons’ respective fisheries show differences in specific composition, in population structure and in their production both in qualitative and quantitative aspects. Thus, in Merja Zerga and Ghar El Melh the fish fauna shows a marine affinity where grey mullet and eels dominate the fish production. In Lake Manzala the ichthyofauna displays a more freshwater affinity with tilapia the dominant group of species. Otherwise, overall fish production at the three sites is regulated by variations in fishing activities, local environments and seasonal conditions. A decrease in fish production was noted over recent years and this is attributed to deteriorating ecological conditions. A variety of factors are implicated including sea communication problems, reduction of the continental (fresh) water supply and increase of pollution causing eutrophication. In addition, over fishing with a continuing increase of fishing effort units, contributes to fisheries decline. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users. Guest editors: J. R. Thompson & R. J. Flower Hydro-ecological Monitoring and Modelling of North African Coastal Lagoons     

The use of an integrative approach to improve accuracy of species identification and detection of new species in studies of stream fish diversity

Genetica - In this study, we made an inventory of the stream and headwater ichthyofauna of the left bank of the Itaipu Dam Reservoir, located in the lower part of the Upper Paraná River basin,...     

The effect of fructose 1,6-diphosphate on pyruvate kinase from white muscle of three species of Mediterranean fish

• 1.1. The kinetics of pyruvate kinase in the absence and presence of fructose 1,6-diphosphate was investigated in preparations from white muscle of Boops boops (L.), Coryphaena hippurus (L.) and Mugil cephalus (L.).
• 2.2. Mugil cephalus pyruvate kinase showed sigmoidal kinetics which changed to hyperbolic in the presence of fructose 1,6-diphosphate with increase in substrate affinity and maximum velocity.
• 3.3. Coryphaena hippurus and Boops boops pyruvate kinase showed hyperbolic kinetics with increase in substrate affinity and maximum velocity in the presence of fructose 1,6-diphosphate, but the Boops boops enzyme was inhibited in the presence of the effector at phosphoenolpyruvate concentrations above 0.375 mM.

     

Scavenger guild and consumption patterns of an invasive alien fish species in a Mediterranean wetland

Invasive Alien Species (IAS) alter ecosystems, disrupting ecological processes and driving the loss of ecosystem services. The common carp Cyprinus carpio is a hazardous and widespread IAS, becoming the most abundant species in many aquatic ecosystems. This species transforms ecosystems by accumulating biomass to the detriment of other species, thus altering food webs. However, some terrestrial species, such as vertebrate scavengers, may benefit from dead carps, by incorporating part of the carp biomass into the terrestrial environment. This study describes the terrestrial vertebrate scavenger assemblage that benefits from carp carcasses in a Mediterranean wetland. We also evaluate the seasonal differences in the scavenger assemblage composition and carrion consumption patterns. Eighty carp carcasses (20 per season) were placed in El Hondo Natural Park, a seminatural mesohaline wetland in south‐eastern Spain, and we monitored their consumption using camera traps. We recorded 14 scavenger species (10 birds and four mammals) consuming carp carcasses, including globally threatened species. Vertebrates consumed 73% of the carrion biomass and appeared consuming at 82% of the carcasses. Of these carcasses consumed, 75% were completely consumed and the mean consumption time of carcasses completely consumed by vertebrates was 44.4 h (SD = 42.1 h). We recorded differences in species richness, abundance, and assemblage composition among seasons, but we did not find seasonal differences in consumption patterns throughout the year. Our study recorded a rich and efficient terrestrial vertebrate scavenger assemblage benefitting from carp carcasses. We detected a seasonal replacement on the scavenger species, but a maintenance of the ecological function of carrion removal, as the most efficient carrion consumers were present throughout the year. The results highlight the importance of vertebrate scavengers in wetlands, removing possible infectious focus, and moving nutrients between aquatic and terrestrial environments.     

Anisakis spp. larvae in three mesopelagic and bathypelagic fish species of the central Mediterranean Sea

In this work 437 fish samples of species belonging to the families Myctophidae (Electrona risso and Diaphus metopoclampus) and Phosichthyidae (Vinciguerria attenuata) were examined for the presence of Anisakidae larvae. The study was performed with fishes in the central Mediterranean Sea, particularly in the Strait of Sicily and in the Strait of Messina. The visual inspection and chloro-peptic analysis revealed the presence of nematode parasites with prevalence values between 2.9% in Electrona risso samples and 5.4% in Vinciguerria attenuata samples. A positive correlation was found between standard length (SL) and prevalence of infestation in D. metopoclampus samples (p < 0.05). The larvae examined were morphologically ascribed, at genus level, to Anisakis morphotypes I and II and molecularly identified as Anisakis pegreffii, Anisakis ziphidarum and Anisakis physeteris, in 67%, 9% and 24% of the fish samples examined. Overall, A. pegreffii and A. ziphidarum larvae were isolated in 14 and 2 specimens of D. metopoclampus respectively, A. physeteris larvae were found in 3 E. risso and 2 V. attenuata. A positive correlation was found between standard length and prevalence of infestation in D. metopoclampus samples (p < 0.05). First information is provided on the presence of Anisakis spp. larvae of the myctophid fish species E. risso, D. metopoclampus and V. attenuata from the Central Mediterranean. It is also confirmed the role of lanternfishes (Myctophidae) as paratenic hosts for Anisakis spp.     

Pathological obstacles of newly-introduced fish species in Mediterranean mariculture: a review

Species diversification has been extensively employed in Mediterranean mariculture industry as a tool to relief the crisis resulting from market saturation and overproduction of the two main representatives, sea bass (Dicentrarchus labrax) and gilthead sea bream (Sparus aurata). Numerous new promising candidates belonging to several fish families such as Sparidae, Polyprionidae, Serranidae, Sciaenidae, Soleidae, Carangidae and Scombridae have been introduced to provide alternative culture choices in Mediterranean. The farming potential of these species in production scale has received some or little success partly due to the fact that their entrance has not been accompanied without the presence of considerable pathological problems. Bacterial outbreaks causing serious problems have been mainly induced by Photobacterium damsella subsp. piscicida, Vibrio alginolyticus, V. harveyi, Tenacibaculum maritimum and Flavobacterium sp. Detrimental parasitic pathogens included the myxosporean Enteromyxum leei, the ciliates Cryptocaryon irritans and Uronema spp., the flagellate Amyloodinium occelatum, the monogenean Zeuxapta seriolae and the digeneans Paradeontacylix-like spp. Viral encephalopathy and retinopathy infections and the chlamydia-like bacteria causing Epitheliocystis disease are also of significance importance. Numerous other agents of lesser pathogenic significance as well as other occasionally recorded pathogens are also mentioned in this review. Additional research effort has to be devoted to the pathogenesis of important pathogens and the interactions with their hosts to assist the viability of new fish species farming in Mediterranean region.     

Assessing fish metrics and biotic indices in a Mediterranean stream: effects of uncertain native status of fish

Implementation of the Water Framework Directive requires tools for measuring and monitoring the ecological status of aquatic ecosystems. Several indices are in use in the Iberian Peninsula, although there has been little comparison among them. We sampled the fish assemblage and limnological features of the Tordera stream (NE Spain) quarterly from September 2001 to May 2003 to evaluate the usefulness of several fish metrics and to compare habitat quality and biotic indices currently in use. Data for eight biotic and abiotic indices for this and three other Catalan river basins were also compiled in order to analyse the relationships among indices. In the Tordera stream, fish abundance and richness increased with stream order except in the last sampling site that had the lowest fish abundance owing to the effects of drought and water abstraction. Although most indices were positively correlated, some displayed low or null correlations particularly for the Tordera basin which is more affected by water abstraction and less by pollution; a commonly used physico-chemical index (ISQA) was the least correlated. In a regional fish index (IBICAT) under development, the brown trout (Salmo trutta) has been previously considered as introduced in the Tordera basin. Here, we report an old published record that demonstrates that trout was present before 1845 and we argue that its status should be considered as uncertain given the current information available. Whether brown trout is treated as native or introduced to this river basin has profound effects on the results of fish metrics because of its dominance in the upper reaches. We briefly discuss the role of introduced species, particularly in headwater streams, in the development of fish indices. Our study exemplifies the need for careful, basin-specific assessment of native/introduced status in the development of fish metrics. Handling editor: K. Martens     

Non-native fish species in Slovak waters: origins and present status

Freshwater fishes recorded in the territory of Slovakia include 95 fish species. As many as one third of these are allochthonous fish species belonging to 14 families, among which several have not occurred in Slovakia recently. Historically, there were three main periods of introduction: the first is the beginning of the 20^th century, the second includes two decades between 1955 and 1975 and the third period is from the year 1990 up to the present time. The origins of the exotic species seen in Slovakia are the four continents — Africa (3), North America (7), Central America (3), and Asia (13) and ten of them are from different regions in Europe. The purpose of intentional introductions of non-native species was to occupy vacant ecological niches in the ecosystems reshaped by human activities, fish stocking, angling or fish farming. Some of these species spread from their original ranges or they penetrated spontaneously from the adjacent countries via the river network system. At the present time, 76 fish species in total form populations in Slovakia. There are 54 autochthonous and 22 allochthonous species, 14 of them are exotic fishes. The invasive characters in 13 fish species were considered, the recent native/total fish ratio is 0.71.     

Large flowers tend to be short-lived in Mediterranean ecosystems: Insights from three Cistus species

Larger and longer lived flowers receive more pollinators, but may also involve increased water maintenance costs under hot, dry environments. Hence, smaller and/or short-lived flowers may buffer such costs. We surveyed floral longevity in three large-flowered Mediterranean Cistus species. We hypothesize that: (1) in Cistus, floral longevity decreases with increasing air temperature and flower size; (2) in C. ladanifer, flower size and longevity increase along an altitudinal gradient; (3) floral longevity is differentially affected by temperature rather than flower size along the gradient; (4) under similar temperature, floral longevity decreases with flower size. For each species, we evaluated the effects of flower size and air temperature on floral longevity. Specifically, floral longevity was surveyed along an altitudinal gradient in the largest flowered species Cistusladanifer. Floral longevity in Cistus species lasted < 1 d and was affected by air temperature, independently of flower size. In C. ladanifer, flower size increased along the gradient but floral longevity decreased. Still, floral longevity decreased with increasing air temperature and, to a lesser extent, with flower size. Together, our findings show a triangular relationship among air temperature, flower size and floral longevity with margins for plasticity to accommodate pollinator attraction with the costs of large-flowered Mediterranean plants.     

Characterization of Vibrio anguillarum and closely related species isolated from farmed fish in Norway.

A total of 264 bacterial strains tentatively or definitely classified as Vibrio anguillarum were examined. The strains were isolated from diseased or healthy Norwegian fish after routine autopsy. With the exception of five isolates from wild saithe (Pollachius virens), the strains originated from nine different species of farmed fish. The bacteria were subjected to morphological, physiological, and biochemical studies, numerical taxonomical analyses, serotyping by slide agglutination and enzyme-linked immunosorbent assay, DNA-plasmid profiling, and in vitro antimicrobial drug susceptibility testing. The results of the microbiological studies were correlated to anamnestic information. The bacterial strains were identified as V. anguillarum serovar O1 (n = 132), serovar O2 (n = 89), serovar O4 (n = 2), serovar O8 (n = 1), and not typeable (n = 1) as well as Vibrio splendidus biovar I (n = 36) and biovar II (n = 1), Vibrio tubiashii (n = 1), and Vibrio fischerii (n = 1). V. anguillarum serovar O1 or O2 was isolated in 176 out of 179 cases of clinical vibriosis in Atlantic salmon (Salmo salar). V. anguillarum serovar O1 was the only serovar isolated from salmonid fish species other than Atlantic salmon, while V. anguillarum serovar O2 was isolated from all marine fish suffering from vibriosis. A 48-Mda plasmid was isolated from all V. anguillarum serovar O1 isolates examined. Serovar O2 isolates did not harbor any plasmids. Resistance against commonly used antibiotic compounds was not demonstrated among V. anguillarum isolates. Neither V. splendidus biovar I nor other V. anguillarum-related species appeared to be of clinical importance among salmonid fish.(ABSTRACT TRUNCATED AT 250 WORDS)     

Matching genetics with oceanography: directional gene flow in a Mediterranean fish species

Genetic connectivity and geographic fragmentation are two opposing mechanisms determining the population structure of species. While the first homogenizes the genetic background across populations the second one allows their differentiation. Therefore, knowledge of processes affecting dispersal of marine organisms is crucial to understand their genetic distribution patterns and for the effective management of their populations. In this study, we use genetic analyses of eleven microsatellites in combination with oceanographic satellite and dispersal simulation data to determine distribution patterns for Serranus cabrilla, a ubiquitous demersal broadcast spawner, in the Mediterranean Sea. Pairwise population F_ST values ranged between ?0.003 and 0.135. Two genetically distinct clusters were identified, with a clear division located between the oceanographic discontinuities at the Ibiza Channel (IC) and the Almeria‐Oran Front (AOF), revealing an admixed population in between. The Balearic Front (BF) also appeared to dictate population structure. Directional gene flow on the Spanish coast was observed as S. cabrilla dispersed from west to east over the AOF, from north to south on the IC and from south of the IC towards the Balearic Islands. Correlations between genetic and oceanographic data were highly significant. Seasonal changes in current patterns and the relationship between ocean circulation patterns and spawning season may also play an important role in population structure around oceanographic fronts.     

Different ability of three Mediterranean oak species to tolerate progressive water stress

Inter-comparisons in the gas exchange patterns and root characteristics under both well-watered and drought conditions were done in three-years-old seedlings of three oak species (Quercus cerris L., Q. frainetto Ten., and Q. ilex L.) growing in controlled environment. Well-watered Q. cerris had greater physiological performances than other oaks, but under drought it was not able to face the water stress showing also structural modifications such as reduction of root length and average diameter. On the other hand, Q. ilex maintained root growth both in drought or well-watered soils. Moreover, it was able to keep open stomata also under water stress, although stomatal conductance (g _s) was low. Q. frainetto had an intermediate position in regard to its physiological and root structural characteristics between Q. cerris and Q. ilex under drought stress. For all oaks the relationship between g _s and the ratio of sub-stomatal and ambient CO₂ concentration (C _i/C _a) highlighted the dynamic adaptation of g _s to the increase of hydraulic resistances of leaf, stem, and roots portions, more evident during the air humidity change and progressive soil dehydration. This suggests a well-triggered above-and under-ground mechanism to endure the drought stress.     

Transpiration efficiency of three Mediterranean annual pasture species and wheat

Attempts to improve water use efficiency in regions with Mediterranean climates generally focus on increasing plant transpiration relative to evaporation from the soil and increasing transpiration efficiency. Our aim was to determine if transpiration efficiency differs among key species occurring in annual pastures in southern Australia. Two glasshouse experiments were conducted with three key pasture species, subterranean clover (Trifolium subterraneum L.), capeweed [Arctotheca calendula (L.) Levyns] and annual ryegrass (Lolium rigidum Gaudin), and wheat (Triticum aestivum L.). Transpiration efficiency was assessed at the levels of␣whole-plant biomass and water use (W), leaf gas exchange measurements of the ratio of CO₂ assimilation to leaf conductance to water vapour (A/g), and carbon isotope discrimination (Δ) in leaf tissue. In addition, Δ was measured on shoots of the three pasture species growing together in the field. In the glasshouse studies, annual ryegrass had a consistently higher transpiration efficiency than subterranean clover or capeweed by all methods of measurement. Subterranean clover and capeweed had similar transpiration efficiencies by all three methods of measurement. Wheat had W values similar to ryegrass but A/g and Δ values similar to subterranean clover or capeweed. The high W of annual ryegrass seems to be related to a conservative leaf gas exchange behaviour, with lower assimilation and conductance but higher A/g than for the other species. In contrast to the glasshouse results, the three pasture species had similar Δ values when growing together in mixed-species swards in the field. Reasons for these differing responses between glasshouse and field-grown plants are discussed in terms of the implications for improving the transpiration efficiency of mixed-species annual pasture communities in the field. Received: 6 March 1997 / Accepted: 23 December 1997     

Effective reassessments of freshwater fish species: a case study in a Mediterranean peninsula

Hydrobiologia - IUCN Red List assessments for fish species can quickly become out of date. In recent years molecular techniques have added new ways of obtaining information about species...     

Biomonitoring potential of a Caryophyllaeid tapeworm: Evaluation of Adenoscolex oreini infection level and health status in three fish species of the genus Schizothorax across eutrophication and pollution gradients

Endoparasitic infections vary significantly across altered aquatic ecosystems, making these organisms ideal for the biomonitoring of degraded environments. To assess the biomonitoring potential of the Caryophyllaeid tapeworm Adenoscolex oreini and the possible impact of water quality on fish species, a study was carried out in three lakes with marked eutrophication and pollution gradients. The A. oreini infection level in three host fish species of the genus Schizothorax and corresponding fish health status were determined. The pattern of cestode infection varied significantly in the three fish species across the pollution gradient. The prevalence of infection in two fish species (Schizothorax esocinus and S. curvifrons) was significantly greater (P < 0.05) in the eutrophic lake than in the reference lake, whereas in S. niger, the maximum was reached in the hypereutrophic lake. The estimated marginal mean intensity and other infection indices varied significantly (P < 0.05) across the inter- and intra-pollution gradients of lakes. Multivariate statistical analysis results revealed maximum cestode infection in the eutrophic lake. An altered seasonal pattern was observed in the highly stressed lake. The gonadosomatic index (GSI) and condition factor values were significantly greater in fish collected from the reference lake than in those collected from the other lakes. A significant negative relationship between GSI and cestode prevalence was observed in the hypereutrophic lake as compared to least eutrophic lake. These findings indicate that infection indices of the Caryophyllaeid tapeworm and health attributes of fish can act as surrogates for the environmental quality of deteriorated lentic water bodies of the north-western Himalayan region, which is currently undergoing environmental degradation.     

Observational evidence of the sensitivity of some fish species to environmental stressors in Mediterranean rivers

We describe a tolerance classification based on the physicochemical parameters of water and habitat quality indices for native and introduced fish species in northeastern Spain. Although fish are widely used as biological indicators, the tolerance categories currently available for Spanish Mediterranean fish species are uncertain or subjective. We sampled 430 sites covering a wide range of river conditions, allowing us to develop tolerance scores based on a quantitative assessment. We used indirect ordination methods to establish stress gradients between the environmental variables compiled during the monitoring surveys carried out from 2002 to 2008. We then drew up a tolerance classification for the most common species in our dataset using weighted average inference models based on the following gradients: water quality and the state of physical habitat. The results were corroborated by multivariate gradient analysis. The fish scores obtained were applied to an independent dataset and a positive correlation was found between assessment protocols. Our results corroborate the use of fish, including exotic fish species, as biological indicators. Our findings may be used in a regional Index of Biotic Integrity and for the use of fish in bioassessment studies based on scores.     

Stimulus filtering and electroreception: Tuberous electroreceptors in three species of Gymnotoid fish

Electroreceptive neurons in the posterior branch of the anterior lateral line nerve of three species of electric fish (Gymnotoidei):Sternopygus macrums, Eigenmannia virescens, andApteronotus albifrons, show speciesspecific differences in the filtering of electrical stimuli. All of the tuberous electroreceptor fibers of an individual are tuned to the same frequency: that of the electric organ discharge (EOD) of the species, more specifically, to that of the individual. The fibers inSternopygus are tuned to 50–150 Hz; those inEigenmannia to 250–500 Hz, and those inApteronotus to 800–1,200 Hz (Figs. 3, 5, 8). Two classes of organs inSternopygus andEigenmannia, P and T units, respond to sinusoidal stimuli at the unit's best frequency (BF) with a phase-locked partially-adapting (P), or tonic (sustained) (T) discharge. T-units are more sharply tuned and are more sensitive than P-units. Only one class of organs,P or partially adapting units, have been found inApteronotus and phase-locking is less evident than it is in other species.Nerve section proximal to the recording site does not alter the tuning curves inSternopygus (Fig. 18), but local warming and cooling of the cutaneous receptor site in bothSternopygus andEigenmannia shifts the tuning curve to higher and lower frequencies, respectively (Fig. 17).     

Lipid content and composition of three species of Antarctic fish in relation to buoyancy

Summary The lipip content and composition of various tissues from three species of nototheniid fish from McMurdo Sound, Antarctic have been examined in relation to their habitat and buoyancy. The pelagic midwater Dissostichus mawsoni is neutrally buoyant. It is rich in lipid which is located subcutaneously, as adipose tissue associated intimately with white muscle, and as lipid droplets within the cells of various tissues. White muscle, red muscle and liver are particularly lipid-rich, although the liver is not positively buoyant. The amount of lipid stored in the white muscle increases towards the centre of buoyancy of the fish. These deposits are documented at the anatomical, histological and ultrastructural levels. Tissues of Pagothenia borchgrevinki contain less lipid than D. mawsoni, but liver, red muscle and white muscle are still very rich in lipid. This species is cryopelagic, that is it spends most of the time in the water column just beneath the surface ice layer. It is not neutrally buoyant, but has a low weight in seawater. The tissues of the benthic Trematomus bernacchii contain only normal levels of lipid. The lipid class compositions of all three species are dominated by triacylglycerol, particularly when lipid contents are high. Serum lipids are an exception in containing high levels of the transport lipid sterol ester. The reason why Antarctic fish use triacylglycerols for buoyancy rather than was esters (as used by many myctophids) or squalene (as used by some sharks) is unclear.