猪伪狂犬病毒蛋白激酶基因的序列测定与分析

对伪狂犬病毒湖北株（ＰＲＶ ＨＢ株）蛋白激酶（ＰＫ）基因进行了克隆和序列测定。分析比较了该序列与ＰＲＶＮＩＡ－３株、Ｋａ株以及ＨＳＶ－１、ＶＺＶ ＰＫ基因的同源性。结果显示,在测定全长１３１２ｂｐ的ＤＮＡ序列中,包括着一个１００２核苷酸的开放读框,可编码３３４个氨基酸组成的多肽。ＰＲＶ－ＨＢ株ＰＫ与ＰＲＶ－ＮＩＡ３、ＰＲＶ－Ｋａ、ＨＳＶ－１、ＶＺＶ ＰＫ基因比较,核苷酸的同源性分别为９８．７％、９     

伪狂犬病病毒糖蛋白G基因的结构分析及其原核表达

利用PCR技术扩增了伪狂犬病毒湖北株 (PRVHB)糖蛋白G(gG)基因 ,进行了序列测定和分析。结果显示扩增和测序片段长 180 4bp ,G C含量 6 8.78%。gG基因ORF长 15 0 0bp ,编码 5 0 0个氨基酸组成的多肽。与PRVRice株 gG基因比较 ,两者核苷酸及推导的氨基酸序列同源性分别为 98%、84.1%。 32 0～ 380位之间的氨基酸序列存在较大差异。根据序列分析结果 ,选取 gG基因长短不同的两个片段分别克隆到原核表达载体 pET2 8a( )进行表达。经SDS PAGE和Dot ELISA分析证实 ,表达出分子量大小分别约为 5 5kD和 6 3kD的特异性gG多肽 ,这为深入阐明PRV gG基因结构与功能及研制 gG ELISA诊断试剂盒奠定了基础     

伪狂犬病病毒糖蛋白G基因的结构分析及其原核表达

利用PCR技术扩增了伪狂犬病毒湖北株(PRV HB)糖蛋白G(gG)基因,进行了序列测定和分析.结果显示扩增和测序片段长1804bp,G+C含量68.78%.gG基因ORF长1500bp,编码500个氨基酸组成的多肽.与PRV Rice 株gG基因比较,两者核苷酸及推导的氨基酸序列同源性分别为98%、84.1%.320～380位之间的氨基酸序列存在较大差异.根据序列分析结果,选取gG基因长短不同的两个片段分别克隆到原核表达载体pET28a(+)进行表达.经SDS-PAGE和Dot-ELISA分析证实,表达出分子量大小分别约为55kD和63kD的特异性gG多肽,这为深入阐明PRV gG基因结构与功能及研制gG-ELISA诊断试剂盒奠定了基础.     

伪狂犬病毒闽A株基因文库的构建及物理图谱分析

本文报道以质粒ｐＢＲ３２２作载体,用鸟枪法克隆出了ＰＲＶ闽Ａ株除ＢａｍＨＩ－１,２外的所有酶切片段,构建了ＰＲＶ闽Ａ株基因文库,并以克隆出的ＢａｍＨＩ片段用光生物素标记作探针,应用分子杂交法确定了ＰＲＶ闽Ａ株绝大部分限制性内切酶位点的位置。     

伪狂犬病病毒Ea株基因组UL区的克隆与序列分析

从伪狂犬病病毒Ea株基因组DNA中扩增到3．76kb的基因组片段,该片段包含UL31、UL32、UL33和UL34基因完整编码区,以及UL30和UL35基因部分序列。UL31、UL32、UL33和UL34基因G C含量为69．5％～73．4％,偏向于使用富含GC特别是第三密码子位置上核苷酸是C或G的密码子,Ala、Leu、Arg的利用率最高,占氨基酸残基总数的36．4％。PRV Ea株UL31和UL32基因与PRV Ka株核苷酸与氨基酸序列同源性都很高,在98％以上;而UL33和UL34基因与Ka株的氨基酸序列同源性较低,分别为95．7％和94．8％。UL31基因在疱疹病毒α—亚科所有成员之间都很保守,并且UL31基因与马疱疹病毒IV型同源程度最高。UL32、UL33和UL34基因均与牛疱疹病毒I型同源程度最高。UL31、UL32、UL33与UL34基因产物均有酪蛋白激酶2磷酸化位点和蛋白激酶C磷酸化位点,表明UL31、UL32、UL33、UL34蛋白质可能都是磷酸化蛋白质。     

2018−2019年四川省伪狂犬病毒的流行病学调查及gC、gE、TK基因遗传进化分析

【背景】伪狂犬病毒(pseudorabies virus,PRV)是养猪生产中的一类重要病原,自2011年以来,我国接种了Bartha-K61疫苗的养殖场暴发了大规模的伪狂犬病疫情。【目的】调查目前四川省PRV的流行病学以及毒株的遗传进化,对2018?2019年从86个猪场收集的384份疑似PRV感染样本进行病原学检测。【方法】根据PRV-gE基因检测引物对采集的384份样品进行PCR扩增,并对不同季节、不同地区的PRV阳性率进行统计,将PRV感染与临床症状的相关性进行统计学分析。选择部分PRV阳性样本在BHK-21细胞上进行病毒的分离,随后进行分离毒株的gC、gE、TK基因的遗传进化分析。【结果】PRV阳性猪只的比率为9.9% (38/384);阳性猪场比率为16.3% (14/86);流产母猪的PRV阳性率为32.1% (27/84);种公猪阳性率为2.0% (4/198);神经症状猪的PRV阳性率为11.4% (4/35);呼吸症状猪的PRV阳性率为4.5% (3/67)。统计学分析表明,PRV感染与母猪和公猪繁殖障碍症状相关(P<0.01)。其中,冬季(12月、1月、2月) PRV阳性率最高,约为33.0% (31/94);春季(3月、4月、5月)的阳性率为9.1% (3/33);夏季和秋季的阳性率分别约为1.5% (2/130)和1.6% (2/127)。在2018?2019年共分离出3株PRV毒株,分别命名为PRV-SN、PRV-DJY、PRV-CD。PRV-XJ为本实验室2016年在四川省分离的一株毒株,为了了解毒株的遗传进化信息,先后扩增了这4个毒株的gC、gE、TK基因。序列比对表明四川分离株与国内株相似,存在额外的零星性突变和缺失。【结论】养殖场仍应加强对种猪群中伪狂犬病的净化。     

表达猪细小病毒VP2基因的重组伪狂犬病毒的构建及其生物学特征研究

根据Bergeron等报道的猪细小病毒(PPV)基因组,设计一对包含VP2全基因的PCR引物,上下游均引入一个BamHI位点,扩增得到VP2基因后,将其插入到pUSK载体中,构建了转移载体pUSK-VP2.采用脂质体介导的转染方法,将伪狂犬病毒TK-/gG-/LacZ 株的基因组DNA与pUSK-VP2共转染PK-15细胞,待细胞病变后收集病毒液,在空斑纯化的同时,利用检测PPV VP2基因和LacZ基因的PCR方法筛选重组病毒TK-/gG-/VP 2株,Southern blotting、SDS-PAGE、Western blotting和电镜观察鉴定重组病毒,并在不同细胞上测定重组病毒的增殖滴度,接种小鼠进行安全性试验.结果发现,外源基因VP2已成功地插入到TK-/gG-/LacZ 亲本株的基因组中,并获得了表达.表达的VP2蛋白可以与猪细小病毒阳性血清反应,而且可以自行装配成病毒样颗粒.同时发现,VP2基因的插入不影响重组病毒的增殖特性,其毒力与亲本株相当.     

伪狂犬病毒(PRV) GZ-JS2017株的分离鉴定及主要毒力基因分子特征分析

为查明贵州省遵义地区某规模化养殖场猪只发生急性死亡的病因,以及明确病原主要毒力基因的分子特征。本试验采用PCR技术、细胞接种试验、动物试验及透射电子显微镜观察等方法进行病原的分离鉴定,并对该病原的主要毒力基因进行克隆、测序及生物信息学分析。结果显示:PCR检测可扩增出PRV特异性核酸阳性条带,接种Vero细胞后可见明显CPE现象,在透射电子显微镜下可见囊泡中呈圆形、160 nm左右的成熟病毒粒子,胞核中可见病毒包涵体和实心、空心2种无囊膜病毒粒子;接种健康猪可引起神经症状,最后麻痹死亡;通过生物信息学分析显示该毒株的gE、gC、gD及TK基因序列均与参考毒株中湖北HNX株和河南HN1201株相对应的核苷酸同源性最高,且在gE基因的48位和496位都有1个天冬氨酸(Asp)的插入;根据gE、gC、gD及TK基因序列的遗传进化树结果显示本次分离毒株与2011年以后所分离鉴定的变异毒株属同一分支。说明本试验成功分离鉴定一株猪伪狂犬病病毒变异毒株,以期为贵州省猪伪狂犬病病毒的流行及变异提供一些参考。     

猪伪狂犬病病毒流行株HLJ-01的分离鉴定及致病性分析

【背景】自2011年以来,猪伪狂犬病毒(pseudorabies virus,PRV)发生变异,经典的疫苗株已不能完全抵抗PRV变异株的感染,国内多个猪场出现伪狂犬病的暴发,PRV变异毒株开始在我国大规模流行。【目的】通过分离PRV流行变异毒株,并对其进行遗传进化和致病性分析,为PRV流行病学调查及疫苗研制提供实验数据。【方法】采集黑龙江某猪场感染PRV的脑组织病料,根据GenBank PRV gE和gB保守序列设计引物,进行PCR鉴定。通过对gE和gC基因进行序列测定和遗传进化分析。利用BHK-21细胞分离病毒,采用噬斑纯化方法对病毒进行纯化。通过电镜、间接免疫荧光对病毒进行鉴定,测定病毒生长曲线并进行致病性研究。【结果】经PCR和测序鉴定分离株为PRV流行株,将其命名为HLJ-01。遗传进化分析结果显示,该分离毒株与我国近几年分离的流行变异株位于同一分支;氨基酸序列分析结果显示,gE和gC存在国内流行变异株的特征序列,表明该分离毒株为流行变异株。生长曲线显示,分离株HLJ-01在感染48h时滴度最高(10^8.5TCID₅₀/mL)。电镜观察结果显示,病毒颗粒直径约150nm,呈球形,有囊膜,囊膜外有放射状纤突,呈现典型PRV病毒特征。动物感染实验结果显示,10^7.0TCID₅₀剂量感染组死亡率为100%;10^6.0TCID₅₀剂量感染组死亡率为80%;10^5.0TCID₅₀剂量感染组死亡率为60%。仔猪在接种病毒后均出现PRV感染的典型症状和病理变化,证实分离毒株对仔猪有较强致病力。【结论】分离获得一株猪伪狂犬病毒,经鉴定该分离株为流行变异株,而且具有较强的致病力,这为PRV流行病学分析及疫苗候选株的筛选奠定了基础。     

Analysis of the Relationship between Cellular Thymidine Kinase Activity and Virulence of Thymidine Kinase-Negative Herpes Simplex Virus Types 1 and 2

The virulence of thymidine kinase-negative herpes simplex virus type 1 (HSV-1; VRTK^? strain) and type 2 (HSV-2; UWTK^? strain) was studied in comparison with that of their parental strains (VR-3 and UW-268, respectively) in an encephalitis model of adult (4-week-old) and newborn (3-day-old) mice. Viral thymidine kinase (TK) activity was essential for the maximum expression of virulence of HSV-1, because the 50% lethal dose (LD₅₀) of VRTK^? was 60 times higher than that of VR-3 in the brains of newborn mice expressing high levels of cellular TK activity. However, the UWTK^? strain showed the same virulence as the parental strain in newborn mice, despite the lack virulence in adults, suggesting that replication of the UWTK^? strain was completely supported by cellular TK activity. This difference in the role of viral and cellular TKs for virus growth between HSV-1 and HSV-2 was confirmed with the one-step growth of virus strains in L-M and L-M(TK^?) cells.     

HSV-tk基因逆转录病毒重组体的构建与DNA序列分析

目的　构建含有单纯疱疹病毒Ⅰ型胸苷激酶 (HSV1 tk)基因的逆转录病毒重组载体pLXSN TK。方法设计一对寡核苷酸引物 ,用PCR方法从质粒pHSV10 6中特异扩增HSV tk基因片段 ( 1168bp) ,分别用BamHI和Eco RI酶切后 ,定向连接到质粒pLXSN中 ,转化宿主菌TG1,分别用上述内切酶 ,PCR和DNA测序鉴定重组质粒。结果　酶切鉴定所切下的片段和PCR扩增的片段大小均与预计相符 ,测序结果与文献报道序列及预计结果一致 ,证实符合表达框架。结论　成功构建了HSV tk嵌合重组质粒pLXSN TK。     

减蛋综合征病毒四川分离株六邻体蛋白基因的序列分析

According to the nucleotide sequence of egg drop syndrome virus(EDSV)AV-127 strain (a foreign standard isolate)from the GenBank,a pair of oligonucleotide primers was designed and synthesizedWith use of polymerase chain reaction(PCR),the hexon-encoding gene fragment was amplified from the genome of EDSV SG9301 strain that was isolated from Sichuan Province of China and the amplified fragment was directly inserted into pMD-T vectorThe recombinant plasmid harboring the hexon-encoding gene was identified by digestion of restriction endonucleases and PCRThen,a positive clone was sequencedThe result showed that the recombinant plasmid contained the complete sequence of the hexon-encoding gene and the hexon-encoding gene was 2733 base pair long which encoded 910 amino acids, identical with AV-127 strain and AAV-2 strain (an attenuated strain)Comparison with AV-127 strain indicated that there was 9985% homology at the nucleotide levelThe homology of the deduced amino acid sequence with AV-127 strain and AAv-2 strain was over 98%,which indicated that the hexon protein was conservativeBut comparatively,the homology of the hexon protein of SG9301 strain with AV-127 strain was higher(9978%),the homology of the hexon protein of AAV-2 strain with AV-127 strain and SG9301 strain were 9868% and 9846% respectivelyComparison of nucleotides and amino acids suggested that the biological character is consistent with the homologies of nucleotide and amino acid of the hexon(Namely,the homology of the hexon of virulence strain with virulence strain was higher than that of virulence strain with attenuated strain),the hexon was one of the most conserved viral proteins among EDSV strains     

A Novel Glycerol Kinase from Flavobacterium meningosepticum: Characterization,Gene Cloning and Primary Structure

A thermostable glycerol kinase (FGK) was purified 34-fold to homogeneity from Flavobacterium meningosepticum. The molecular masses of the enzyme were 200 kDa by gel filtration and 50 kDa by SDS-PAGE. The Km for glycerol and ATP were 0.088 and 0.030 mM, respectively. The enzyme was stable at 65°C for 10 min and at 37°C for two weeks. The enzyme gene was cloned into Escherichia coli and its complete DNA was sequenced. The FGK gene consists of an open reading frame of 1494-bp encoding a protein of 498 amino acids. The deduced amino acid sequence of the gene had 40-60% similarity to those of glycerol kinases from other origins and the amino acid sequence of the putative active site residue reported for E. coli GK is identical to the corresponding sequence of FGK except for one amino acid residue.     

家蚕核型多角体病毒山东株p35基因的克隆及序列分析

根据家蚕核型多角体病毒T3株p35基因非编码区序列设计一对特异性引物,应用PCR技术从家蚕核型多角体病毒山东株中扩增得到一条1 080 bp的片段。测序结果表明,该片段含有p35基因,开放阅读框长900 bp,编码299个氨基酸,分子量为34.91kDa,pI=6.4。序列分析表明,BmNPV山东株的p35基因与T3株存在差异。 Abstract:According to the 5′ and 3′ untranslated region sequences of p35 gene from Bombyx mori nuclear polyhedrosis virus isolate T3,a pair of primers was designed employing computer analysis.With the primers,polymerase chain reaction (PCR) was performed and a 1 080 bp fragment was obtained from BmNPV strain Shandong.Sequencing result showed that it was p35 gene (GenBank accession number：AY157746),and it included an open reading frame of 900 bp,encoding 299 amino acids with Mr=34.91kDa and pI=6.40.BLAST analysis indicated that there were seven bases and three amino acids difference between p35 from BmNPV strain Shandong and that from BmNPV isolate T3.     

SEN病毒D亚型中国分离株基因克隆及序列分析

According to the published nucleotide sequence of SEN virus genome,specific primers were designed and synthesizedFrom the serum of a Chinese patient with non-A-E hepatitis,two long fragments(totally 3175bp) spanning the complete coding region of SENV-D variant gene were amplified by semi-nested PCRThe amplified fragments were cloned and sequencedThe nucleotide sequence homology of this Chinese strain with SENV-D(AX025730),SENV-D(AB059352) and TTV(AB028668) were 90%,88% and 91% respectivelyThe protein encoded by ORF1 has two putative conserved sequence motifs relating to the replication of the virus and,besides,a conserved ATP/GTP-binding motif and several highly conserved protein kinase phosphorylation sites     

传染性支气管炎病毒青岛腺胃分离株(SD/97/02)S2蛋白基因的序列测定和分析

根据GenBank上发表的IBV S2基因序列,自行设计了两对引物,分别扩增SD／97／02株S2基因的上游1100bp部分和下游的900bp部分,两段序列拼接后包含了S2全基因的序列。将此两段分别克隆入pGEM T-easy载体,测序后将序列用分析软件DNASTAR和网上的BLAST软件进行分析,结果表明,S2基因比S1基因相对来说更保守,位于氨基酸第560－600位很有是与囊膜锚着的部位,而S2与S1的交界处以HRRRR为特征,这不同地常规的RRF／SRR。     

玉米中一种新的蛋白激酶电子克隆与序列分析

目的：电子克隆玉米中一种新的蛋白激酶基因。方法：以拟南芥中一个蛋白激酶的氨基酸序列为探针,对玉米的EST数据库进行同源性检索和筛选并克隆。结果：序列分析显示该cDNA长1121bp,有一个450bp的开放阅读框,编码149个氨基酸,且具有保守苏氨酸/丝氨酸蛋白激酶结构域和TEY基元,说明所克隆的cDNA序列为玉米的MAPK全长cDNA。结论：所克隆的cDNA序列为玉米的MAPK全长cDNA。     

A Unique Mutation of Glycoprotein Gene of the Attenuated RC-HL Strain of Rabies Virus,a Seed Virus Used for Production of Animal Vaccine in Japan

Although the RC-HL strain of rabies virus is avirulent in adult mice, the amino acid at position 333 of its G protein is arginine, which is thought to be necessary for virulence in adult mice upon intracerebral inoculation of the virus. This result suggests that besides arginine at position 333, some other positions of G protein might also be involved in determining the virulence of rabies virus.