Low beta diversity of ambrosia beetles (Coleoptera: Curculionidae: Scolytinae and Platypodinae) in lowland rainforests of Papua New Guinea

We assessed the effect of geographical distance on insect species turnover in a situation where other major environmental factors, including host plant species, altitude, and climate, were constant. We sampled ambrosia beetles (Coleoptera, Curculionidae: Scolytinae and Platypodinae) from four tree species: Artocarpus altilis , Ficus nodosa , Leea indica and Nauclea orientalis , at three sites forming a 1000 km transect in lowland rainforests of northern Papua New Guinea. A standardized volume of wood from trunk, branches and twigs was sampled for ambrosia beetles from three individuals of the four tree species at each site. Each tree was killed standing and left exposed to beetle colonization for 20 days prior to sampling. We obtained 12 751 individuals from 84 morphospecies of ambrosia beetles. We surveyed most of the local species richness at each site, predicted by Chao 2 species richness estimates. The similarity of ambrosia beetle communities, estimated by Chao-Sorensen index, was not correlated with their geographical distance. Likelihood analysis and Q-mode analysis using Monte Carlo-generated null distribution of beetles among sites supported the hypothesis that the assemblages of ambrosia beetles at different sites are drawn from the same species pool, regardless of their geographical distance. Tree part (trunk, branch, or twig) was more important predictor of the composition of ambrosia beetle communities than was the host species or geographical location. All three variables, however, explained only a small portion of variability in ambrosia assemblages. The distribution of ambrosia beetles among tree parts, tree species and study sites was mostly random, suggesting limited importance of host specificity or dispersal limitation.     

Molecular comparisons of freshwater and marine isolates of the same morphospecies of heterotrophic flagellates

Heterotrophic flagellates are key components of all ecosystems. Understanding the patterns of biodiversity of these organisms is thus particularly important. Here we analyzed the intraspecific diversity of 10 morphospecies of heterotrophic flagellates comprising representatives of the Apusozoa (2 morphospecies) and Kinetoplastea (8 morphospecies), all belonging to the most common flagellates with worldwide distribution. Most morphospecies showed a mixing of lineages isolated from diverse habitats, indicating that some lineages of these morphospecies had been able to colonize different habitats several times. Furthermore, our results revealed remarkable levels of genetic divergence within most of the morphospecies studied, underlining the difficulty of correctly determining species by means of morphology alone. Many cryptic or pseudocryptic species seem to occur. Our results revealed clear divergence between marine and freshwater lineages of the morphospecies Ancyromonas sigmoides, showing that freshwater lineages have not been able to colonize marine environments and marine lineages have not been able to colonize freshwater environments for a long time.     

Molecular Comparisons of Freshwater and Marine Isolates of the Same Morphospecies of Heterotrophic Flagellates

Heterotrophic flagellates are key components of all ecosystems. Understanding the patterns of biodiversity of these organisms is thus particularly important. Here we analyzed the intraspecific diversity of 10 morphospecies of heterotrophic flagellates comprising representatives of the Apusozoa (2 morphospecies) and Kinetoplastea (8 morphospecies), all belonging to the most common flagellates with worldwide distribution. Most morphospecies showed a mixing of lineages isolated from diverse habitats, indicating that some lineages of these morphospecies had been able to colonize different habitats several times. Furthermore, our results revealed remarkable levels of genetic divergence within most of the morphospecies studied, underlining the difficulty of correctly determining species by means of morphology alone. Many cryptic or pseudocryptic species seem to occur. Our results revealed clear divergence between marine and freshwater lineages of the morphospecies Ancyromonas sigmoides, showing that freshwater lineages have not been able to colonize marine environments and marine lineages have not been able to colonize freshwater environments for a long time.     

葡萄科植物叶表皮特征及其系统学意义

在光学显微镜和扫描电镜下,对葡萄科Vitaceae11属37种代表植物的叶表皮特征进行了观察,发现该科植物叶表皮细胞形状为无规则形或多边形,垂周壁一般为平直、弓形或浅波状;气孔器通常仅分布在下表皮（火筒树属Leea偶尔可在上表皮观察到）,除无规则型（地锦属Parthenocissus、俞藤属Yua、葡萄属Vitis、蛇葡萄属Ampelopsis和酸蔹藤属Ampelocissus）最为常见外,不等细胞型（火筒树属）、短平列型（白粉藤属Cissus、乌蔹莓属Cayratia和崖爬藤属Tetrastigma）、     

Exotic Pine Plantations in Victoria, Australia: A Threat to Epigaeic Beetle (Coleoptera) Assemblages?

Ground-dwelling invertebrates were sampled by pitfall traps over a 14 week period in parent eucalypt forest and three stages of exotic Pinus radiata plantations established after forest clearance in central Victoria. The four treatments each yielded numerous beetle morphospecies, and the assemblages corresponded only partially with the understorey vegetation. More than 200 beetle morphospecies were captured during this short survey, with 30 found in all four treatments; few morphospecies were abundant (only five with >100 individuals in a total of 3382 beetles). Each treatment had unique morphospecies, but all were rich, with the lowest diversity being 91 morphospecies (young pines). These data confirm that beetle diversity can remain substantial in exotic softwood plantations, but considerable care is needed to interpret this apparent diversity in relation to forest management and the effect of replacement of native forests by exotic taxa.     

Use of barrier pitfall traps to enhance inventory surveys of epigaeic Coleoptera

Comparisons of catches of beetles in standard pitfall traps and various patterns of barrier pitfall traps were made in open grassy woodland in Victoria, Australia, in late summer. Comparative results are given for abundance and morphospecies richness of total Coleoptera, and for Carabidae as a more limited focal group. For both categories, in three separate trials (1) use of 120 cm barriers gave larger catches than standard traps (1360 individual beetles [503 Carabidae] in barrier traps, 363 [57 Carabidae] in standard traps, pool of 129 morphospecies); (2) catch sizes increased almost 5-fold with increasing barrier length (0, 30, 60, 120 cm) (61 morphospecies); and (3) use of a five-trap system with barriers gave higher numbers (3344 and 2303 total beetles, 345 and 135 Carabidae) than the same configuration without barriers (92 morphospecies).     

Fast Census of Moth Diversity in the Neotropics: A Comparison of Field-Assigned Morphospecies and DNA Barcoding in Tiger Moths

The morphological species delimitations (i.e. morphospecies) have long been the best way to avoid the taxonomic impediment and compare insect taxa biodiversity in highly diverse tropical and subtropical regions. The development of DNA barcoding, however, has shown great potential to replace (or at least complement) the morphospecies approach, with the advantage of relying on automated methods implemented in computer programs or even online rather than in often subjective morphological features. We sampled moths extensively for two years using light traps in a patch of the highly endangered Atlantic Forest of Brazil to produce a nearly complete census of arctiines (Noctuoidea: Erebidae), whose species richness was compared using different morphological and molecular approaches (DNA barcoding). A total of 1,075 barcode sequences of 286 morphospecies were analyzed. Based on the clustering method Barcode Index Number (BIN) we found a taxonomic bias of approximately 30% in our initial morphological assessment. However, a morphological reassessment revealed that the correspondence between morphospecies and molecular operational taxonomic units (MOTUs) can be up to 94% if differences in genitalia morphology are evaluated in individuals of different MOTUs originated from the same morphospecies (putative cases of cryptic species), and by recording if individuals of different genders in different morphospecies merge together in the same MOTU (putative cases of sexual dimorphism). The results of two other clustering methods (i.e. Automatic Barcode Gap Discovery and 2% threshold) were very similar to those of the BIN approach. Using empirical data we have shown that DNA barcoding performed substantially better than the morphospecies approach, based on superficial morphology, to delimit species of a highly diverse moth taxon, and thus should be used in species inventories.     

How does pollination mutualism affect the evolution of prior self‐fertilization? A model

The mode of pollination is often neglected regarding the evolution of selfing. Yet the distribution of mating systems seems to depend on the mode of pollination, and pollinators are likely to interfere with selfing evolution, since they can cause strong selective pressures on floral traits. Most selfing species reduce their investment in reproduction, and display smaller flowers, with less nectar and scents (referred to as selfing syndrome). We model the evolution of prior selfing when it affects both the demography of plants and pollinators and the investment of plants in pollination. Including the selfing syndrome in the model allows to predict several outcomes: plants can evolve either toward complete outcrossing, complete selfing, or to a stable mixed‐mating system, even when inbreeding depression is high. We predict that the evolution to high prior selfing could lead to evolutionary suicides, highlighting the importance of merging demography and evolution in models. The consequence of the selfing syndrome on plant–pollinator interactions could be a widespread mechanism driving the evolution of selfing in animal‐pollinated taxa.     

Factors influencing community structure in a South American tank bromeliad fauna

We examined factors influencing the structure of naturally replicated, taxonomically unrestricted communities inhabiting South American tank bromeliads. We measured aspects of plant physical structure and collected the entire macroscopic fauna of 209 bromeliads from the Yasuní Scientific Reserve in lowland eastern Ecuador. We collected a total of 11 219 individuals of 354 morphospecies. The morphospecies abundance distribution of our sample was approximated by a log-series distribution dominated by rare morphospecies (57% of the morphospecies were represented by a single individual). Six methods for estimating the total number of bromeliad associated morphospecies in our study area gave results which varied by a factor of three, illustrating that caution should be exercised in interpreting the results of any single estimator. Variation in plant volume, number of leaves, detritus content, and water volume explained 62% of the variation in morphospecies richness among plants. Finally, there was a quadratic relationship between body mass and both individual abundance and morphospecies richness in our sample. These results illustrate an important role of both biotic and abiotic factors influencing the structure of taxonomically unrestricted, ecologically defined natural communities.     

Selection caused by self-fertilization I. Four measures of self-fertilization and their effects on fitness

The standard models of selfing in seed plants consider only the ovules, which are assumed to have a constant selfing rate. It has recently become clear, however, that hermaphrodite or monoecious populations frequently show sexual asymmetry (nonconstant pollen:ovule fertilities among individuals). Such asymmetry usually results in pollen selfing rates which differ from those for the ovules and are frequency-dependent even for constant ovule selfing rates. A recent study of selfing rates for all gametes of an individual is extended here to include four selfing rates (for ovules, pollen, all gametes, and zygotes), and simple mathematical relationships linking the four rates are obtained. Unlike earlier models of selfing, it is not assumed that the ovule selfing rate is constant, but instead that this rate, like all the others, is determined by the mobility of the pollen, which in turn is determined by the floral biology and ecology. It is found that all four selfing rates are usually frequency-dependent. The selfing rate for all gametes (the combined selfing rate) is usually intermediate between those for the ovules and pollen, and the zygotic rate is usually the smallest of the four. The exceptions to the above statements occur for relatively extreme situations, such as complete selfing for pollen or ovules, no selfing, or sexual symmetry. Three modes of selfing are considered: prior (PS), competing (CS), and delayed (DS) self-fertilization. It is shown that if there are at least two types with different selfing rates in the population, then the ranking of their selfing rates may depend upon the frequencies of the types (for the combined and the zygotic rates), may be frequency-independent (ovule rate), or may be dependent or independent, according to the mode of selfing (pollen rate). The effects of the various influences on the amount of selfing are by no means negligible. Thus a numerical study shows pollen selfing rates for one type which vary from 0.09 to 0.96, according to its frequency. Another numerical result shows a change in combined selfing rate from 0.13 to 0.86, depending solely on the mode of selfing. Results for Scots Pine show that an ovule selfing rate of 0.5 was accompanied by a combined rate of 0.143.The population selfing rate is not the same as the mean of individual selfing rates, and can only be obtained if female fitnesses as well as ovule selfing rates are known for each type.Previous models of selfing have failed to distinguish between the effects of increased selfing and increased pollen fertility, with the result that increased selfing always resulted in greater fitness. In the present models the two effects are distinguishable, and it is found that increased selfing may result in increased or decreased fitness, depending also on population density and on a form of pollen density. Thus the old dogma that in the absence of viability and fertility selection increased selfing always results in increased fitness is finally refuted, and the importance of the influence of ecological parameters on selfing and fitness is emphasized, since population density and pollen density influence the selfing rates.     

The genetic diversity of planktic foraminifera and the global distribution of ribosomal RNA genotypes

Fossil planktic foraminifers in the ocean sediments play an unparalleled role in our understanding of the oceanographic environment in the past. An in depth knowledge of their diversity, ecology and biogeography in the modern ocean lies central to the interpretation of the fossil assemblages. In comparison with their benthic counterparts, planktic foraminifera have a very limited diversity of around fifty extant morphospecies. Their morphospecies diversity peaks in the sub-tropics and decreases steeply towards the poles. Traditional species concepts have partitioned morphological types into distinct species (morphospecies) based on test shape, but genetic studies show that individual morphospecies are actually complexes of several discrete genetic types (genotypes). Many of these genotypes have distinct ecologies and novel adaptations that are consistent with species-level classification, indicating that the true diversity of planktic foraminifers has been greatly underestimated. Although planktic foraminifera are clearly capable of long-distance dispersal, they may be constrained by both physical and ecological barriers that vary according to the evolutionary history and ecology of the individual genotypes within a morphospecies. These differences lead to diverse biogeographies. Here, we provide an overview of the genetic and biogeographic data available to date for the planktic foraminifera and present global biogeographies highlighting the distribution of genetic types in the eight planktic foraminiferal morphospecies for which detailed molecular evidence is available.     

The evolution of self-fertilization and inbreeding depression under pollen discounting and pollen limitation

We model the evolution of plant mating systems under the joint effects of pollen discounting and pollen limitation, using a dynamic model of inbreeding depression, allowing for partial purging of recessive lethal mutations by selfing. Stable mixed mating systems occur for a wide range of parameter values with pollen discounting alone. However, when typical levels of pollen limitation are combined with pollen discounting, stable selfing rates are always high but less than 1 (0.9相似文献   

Growth Rates of Marine Ciliates on Diverse Organisms Reveal Ecological Specializations within Morphospecies

Abstract The growth rate of 31 stocks of Euplotes, a cosmopolitan, marine, unicellular protist, on six food species representing two different food types, microalgae and bacteria, has been determined. The 31 stocks represented nine reproductively isolated groups (biological species?) based on breeding relationships. Three morphospecies, E. vannus, E. crassus, and E. minuta, each with both autogamous and cross-breeding breeding groups, were included. The mean number of fissions completed in 5 days of a breeding group growing on one of the six food species varied from zero to 17.06. There is a strong interaction between morphospecies and food type. The largest morphospecies, E. vannus, translates the nutritional content of algae into growth better than it translates that of bacteria, while the reverse is true for E. minuta, the smallest morphospecies. Autogamous breeding groups grow more rapidly on algae than on bacteria when compared to cross-breeding groups in the same morphospecies. Two breeding groups cannot grow on Escherichia coli. ANOVA of fissions completed in 5 days revealed significant main effects and interactions between many hierarchical levels of stocks and food species. These significant interactions indicate that genetically determined ecologically important information is present at all taxonomic levels—morphospecies, breeding system, breeding group, and stock. As all these levels are biologically meaningful, measuring biodiversity in the E. vannus–crassus–minuta complex solely on morphospecies will inadequately represent the ecological diversity present in the organisms and their environment. Received: 11 May 1998; Accepted: 31 July 1998     

Coccinellid morphospecies as an alternative method for differentiating management regimes in olive orchards

Morphospecies, also known as morphotypes, recognizable taxonomic units (RTUs) and parataxonomic units (PUs) have been used for rapid biodiversity assessment (RBA) in invertebrate diversity studies worldwide. Their utilization might lighten taxonomists’ workload when rapidly evaluating the richness and diversity of arthropods for conservation or biological assessment. To validate morphospecies, as opposed to taxonomic species, ladybird beetles (Coleoptera, Coccinellidae) were chosen in order to differentiate organic and non-organic management regimes (integrated and conventional) in olive orchards in southern Spain. Ladybird beetle specimens collected over two years (1999 and 2000) from three locations were sorted by morphospecies, and then identified by Coleopteran specialists according to taxonomic species. Thus, two different datasets were created, independently analyzed and compared to measure the accuracy at the morphospecies level. The comparison of morphospecies and species datasets showed an accuracy of 62.18% (one morphospecies to one taxonomic species), with the identifying error principally made when one species was identified as two different morphospecies (32.74%). Although two Coccinellid species (Scymnus mediterraneus Iablokoff-Khnzorian, 1972 and Coccinella septempunctata Linnaeus, 1758) showed significant differences among regimes during the June–August period in spite of small errors, we suggest that the most abundant morphospecies of Coccinellidae and the June–August period could be adopted as a rapid and useful tool for evaluating the impacts of non-organic vs. organic management regimes in olive orchards.     

POPULATION GENETICS OF INTRAGAMETOPHYTIC SELFING

Intragametophytic selfing is a mode of reproduction occurring in homosporous ferns where two gametes from the same haploid gametophyte form a completely homozygous sporophyte. The inbreeding equilibrium is derived for a population with partial intragametophytic selfing, selfing, and outcrossing. Procedures for directly estimating the extent of intragametophytic selfing and selfing using parent-offspring data are given. The conditions for a stable polymorphism from a heterozygous-advantage fitness model are more restrictive for partial intragametophytic selfing than for selfing. The rate of decay of gametic disequilibrium is slower for partial intragametophytic selfing than for selfing. Based on these findings, one would predict that plants with intragametophytic selfing would have less polymorphism for loci with a heterozygous advantage and more gametic disequilibrium between neutral loci than is expected for populations with an equivalent amount of selfing. Data from several studies are consistent with these predictions.     

Multilocus estimation of selfing and its heritability

We describe a new method of estimating the selfing rate (S) in a mixed mating population based on a population structure approach that accounts for possible intergenerational correlation in selfing rate, giving rise to an estimate of the upper limit for heritability of selfing rate (h(2)). A correlation between generations in selfing rate is shown to affect one- and two-locus probabilities of identity by descent. Conventional estimates of selfing rate based on a population structure approach are positively biased by intergenerational correlation in selfing. Multilocus genotypes of individuals are used to give maximum-likelihood estimates of S and h(2) in the presence of scoring artifacts. Our multilocus estimation of selfing rate and its heritability (MESH) method was tested with simulated data for a range of conditions. Selfing rate estimates from MESH have low bias and root mean squared error, whereas estimates of the heritability of selfing rate have more uncertainty. Increasing the number of individuals in a sample helps to reduce bias and root mean squared error more than increasing the number of loci of sampled individuals. Improved estimates of selfing rate, as well as estimates of its heritability, can be obtained with this method, although a large number of loci and individuals are needed to achieve best results.     

繁殖保障和延迟自交的研究进展

尽管植物在进化过程中面临不利自花授粉的选择,但许多植物仍维持混合的授粉机制。繁殖保障假说是解释自交进化的最重要因子之一,一直是植物生殖生态学和进化生物学关注的焦点之一。概述了近年来的主要研究热点及其进展,包括自交进化的遗传和生态机制及理论模型探讨、繁殖保障假说的提出、验证自交能否提供繁殖保障的例证、延迟自交的类型及延迟自交能否提供繁殖保障的例证等方面。介绍了我国在繁殖保障和延迟自交方面研究的现状和不足之处,结合国际上研究繁殖保障假说的发展趋势已由单季节、单种群、单因子的研究阶段过渡到多季节、多种群、多因子（自交方式及其所占比例、花粉折损、种子折损、自交率和近交衰退）的综合研究阶段,及由传统的、经典的研究方法过渡到应用现代实验手段（如SSR、SNP等分子标记）和先进仪器设备的研究阶段,提出今后研究中应注意的问题。有必要借用多学科（植物学、生态学和分子生物学）的方法及手段进行不同物种的对比和综合细致的研究。     

Variation in "biodiversity value" of peatmoss species in Sphagnum section Acutifolia (Sphagnaceae)

Species are the most common currency by which biodiversity is measured, but species are not equivalent in "biodiversity value" because of differences in phylogenetic history and current population processes. Morphologically defined species in Sphagnum section Acutifolia (Bryophyta) were compared with regard to how phylogenetically distinct each is from its sister species and how much nucleotide variation each encompasses. Comparisons were based on sequence variation at seven nuclear and chloroplast loci. Assignment of collections to morphospecies accounted for about 57-75% of the overall nucleotide variation at the seven loci, but morphospecies differed greatly in how much nucleotide diversity they encompass. In addition, morphospecies varied widely in their genetic distinctiveness, estimated as the length of the stem branch from the most recent common ancestor and numbers of differentially fixed and shared polymorphic nucleotides among taxa. Levels of molecular diversity within morphospecies were not correlated with their degree of isolation. Factors that affected the biodiversity value of species include age, mode of origin, demographic history, and reproductive biology.     

Phylogenetic Inference of Colony Isolates Comprising Seasonal Microcystis Blooms in Lake Taihu, China

Blooms of the toxin-producing cyanobacterium, Microcystis spp., are an increasingly prevalent water quality problem and health hazard worldwide. China's third largest lake, Lake Taihu, has been experiencing progressively more severe Microcystis blooms over the past three decades. In 2009 and 2010, individual Microcystis colonies, consisting of four different morphospecies, were isolated and genotyped using a whole-cell multiplex PCR assay. The 16S-23S rDNA-ITS sequences were aligned based on Bayesian inference and indicated that one morphospecies was genetically unique (Microcystis wesenbergii) and three were indistinguishable (Microcystis aeruginosa, Microcystis flos-aquae, and Microcystis ichthyoblabe). Microcystin (mcyB) genes were detected intermittently in two of the morphospecies while the other two morphospecies lacked the mcyB gene in all samples. Water temperature was found to influence bloom formation and morphotype prevalence, and chlorophyll a and temperature were positively and significantly correlated with microcystin concentration. Cooler water temperatures promoted toxigenic strains of Microcystis. Wind appeared to influence the distribution of morphotypes across the lake, with M. aeruginosa and M. ichthyoblabe being more susceptible to wind stress than M. wesenbergii and M. flos-aquae. The results of this study indicated that the blooms were composed of a variety of Microcystis morphospecies, with more genotypes observed than can be attributed to individual morphotypes. We conclude that morphology is not a reliable indicator of toxigenicity in Lake Taihu, and caution should be exercised when the M. aeruginosa morphotype is present because it is capable of producing MC-LR, the most toxic microcystin isoform.     

Recognizing morphospecies in the heliolitid coral Plasmoporella

Multivariate analysis, which has often been used effectively in paleontological work, was performed on 17 specimens of Plasmoporella collected from a bed of the Xiazhen Formation in the Zhuzhai section of Yushan area, China. Frequency histograms, simple correlation analysis, and principal component analysis (PCA) showed that five morphological characters, i.e., diameter of tabularium (DC), distance between neighboring septa (DNS), distance between opposite septa (DOS), distance between corallites (DBC), and number of corallites per cm² (N) were suitable for cluster analysis. Moreover, PCA suggested that the coralla could be divided into two groups. Cluster analysis with squared Euclidean distances calculated based on the selected five morphological characters was conducted on the raw matrix to discriminate “morphospecies”. As a result, two groups were extracted in the dendrogram. The validity or distinctiveness of the groups was tested by discriminant analysis (DA). The analysis confirmed that the assemblage of coralla can be divided successfully into two groups, which are interpreted as two morphospecies. A qualitative comparison between two reported species and the studied morphospecies showed that morphospecies A is Plasmoporella shiyanshanensis Lin and Chow, 1977 and B is Plasmoporella kasachstanica Bondarenko, 1958. In addition, DA indicated that DOS and DNS were effective to distinguish the two morphospecies. Bivariate plots based on the two morphospecies were used to illustrate the range of variation, which showed that intraspecific variation in these characters was obvious but interspecific variation was not.