Predicting attenuant and resonant 2-cycles in periodically forced discrete-time two-species population models

Periodic environments may either enhance or suppress a population via resonant or attenuant cycles. We derive signature functions for predicting the responses of two competing populations to 2-periodic oscillations in six model parameters. Two of these parameters provide a non-trivial equilibrium and two provide the carrying capacities of each species in the absence of the other, but the remaining two are arbitrary and could be intrinsic growth rates. Each signature function is the sign of a weighted sum of the relative strengths of the oscillations of the perturbed parameters. Periodic environments are favourable for populations when the signature function is positive and are deleterious if the signature function is negative. We compute the signature functions of four classical, discrete-time two-species populations and determine regions in parameter space which are either favourable or detrimental to the populations. The six-parameter models include the Logistic, Ricker, Beverton–Holt, and Hassell models.     

Effects of habitat quality and size on extinction in experimental populations

Stochastic population theory makes clear predictions about the effects of reproductive potential and carrying capacity on characteristic time-scales of extinction. At the same time, the effects of habitat size and quality on reproduction and regulation have been hotly debated. To trace the causal relationships among these factors, we looked at the effects of habitat size and quality on extinction time in experimental populations of Daphnia magna. Replicate model systems representative of a broad-spectrum consumer foraging on a continuously supplied resource were established under crossed treatments of habitat size (two levels) and habitat quality (three levels) and monitored until eventual extinction of all populations. Using statistically derived estimates of key parameters, we related experimental treatments to persistence time through their effect on carrying capacity and the population growth rate. We found that carrying capacity and the intrinsic rate of increase were each influenced similarly by habitat size and quality, and that carrying capacity and the intrinsic rate of increase were in turn both correlated with time to population extinction. We expected habitat quality to have a greater influence on extinction. However, owing to an unexpected effect of habitat size on reproductive potential, habitat size and quality were similarly important for population persistence. These results support the idea that improving the population growth rate or carrying capacity will reduce extinction risk and demonstrate that both are possible by improving habitat quality or increasing habitat size.     

The Role of Density Regulation in Extinction Processes and Population Viability Analysis

We review the role of density dependence in the stochastic extinction of populations and the role density dependence has played in population viability analysis (PVA) case studies. In total, 32 approaches have been used to model density regulation in theoretical or applied extinction models, 29 of them are mathematical functions of density dependence, and one approach uses empirical relationships between density and survival, reproduction, or growth rates. In addition, quasi-extinction levels are sometimes applied as a substitute for density dependence at low population size. Density dependence further has been modelled via explicit individual spacing behaviour and/or dispersal. We briefly summarise the features of density dependence available in standard PVA software, provide summary statistics about the use of density dependence in PVA case studies, and discuss the effects of density dependence on extinction probability. The introduction of an upper limit for population size has the effect that the probability of ultimate extinction becomes 1. Mean time to extinction increases with carrying capacity if populations start at high density, but carrying capacity often does not have any effect if populations start at low numbers. In contrast, the Allee effect is usually strong when populations start at low densities but has only a limited influence on persistence when populations start at high numbers. Contrary to previous opinions, other forms of density dependence may lead to increased or decreased persistence, depending on the type and strength of density dependence, the degree of environmental variability, and the growth rate. Furthermore, effects may be reversed for different quasi-extinction levels, making the use of arbitrary quasi-extinction levels problematic. Few systematic comparisons of the effects on persistence between different models of density dependence are available. These effects can be strikingly different among models. Our understanding of the effects of density dependence on extinction of metapopulations is rudimentary, but even opposite effects of density dependence can occur when metapopulations and single populations are contrasted. We argue that spatially explicit models hold particular promise for analysing the effects of density dependence on population viability provided a good knowledge of the biology of the species under consideration exists. Since the results of PVAs may critically depend on the way density dependence is modelled, combined efforts to advance statistical methods, field sampling, and modelling are urgently needed to elucidate the relationships between density, vital rates, and extinction probability.     

生长季节和非生长季节交替出现的种群动态模型及环境变化的影响

有些生物的生长季节和非生长季节交替出现,本文建立了描述这种生物种群动态的方程,并研究了在环境稳定、随机波动、定向变化的情况下种群的变化方式,还讨论了种群的危害及濒危情况．生长季节延长时种群增大,有害生物的危害加重,濒危生物濒危程度减轻;生长季节缩短时种群减小,有害生物的危害减轻,濒危生物更加濒危或灭绝．     

Degree-day Models for Predicting Egg Hatch and Population Increase of Criconemella xenoplax

A degree-day model was derived to predict egg hatch for Criconemella xenoplax. Eggs collected from gravid females were incubated in distilled water at constant temperatures of 10-35 C. Sixty-six percent of all eggs hatched between 13 and 32 C, and 42% hatched at 10 C. All eggs aborted above 32.5 C. Between 25 and 32 C, 8.5 ± 0.5 days were required for egg hatch. Degree-day requirement for egg hatch at 10-30 C was estimated to be 154 ± 5 with a base of 9.03 ± 0.04 C. This base of 9 C was adopted in studies of the relationship between degree-days and nematode population increase on Prunus seedlings grown 9-11 weeks in a greenhouse. Degree-day accumulations were based upon daily averages from maximum and minimum air temperatures. Ratios of final to initial population densities exhibited an exponential pattern in relation to degree-day accumulations with proportionate doubling increment of 0.100 ± 0.049 every 139 ± 8 degree-days. These results provide a means of predicting nematode population increase under greenhouse conditions and a basis for choosing sampling intervals when evaluating nematode multiplication.     

The Degradation of Dimethoate and the Mineral Immobilizing Function for Cd2+ by Pseudomonas putida

Organophosphorus pollution and heavy metal pollution are prominent in China and have caused increasingly severe environmental pollution. This research used Pseudomonas putida to degrade dimethoate so as to induce the formation of calcium carbonate (CaCO₃) and calcium phosphate (Ca₃(PO₄)₂) in beef extract peptone medium. In addition, the mineral immobilizing function of the generated Ca₃(PO₄)₂ and CaCO₃ for Cd²⁺ was studied by adding different concentrations of Cd²⁺ to the culture solution. Meanwhile, transmission electron microscopy (TEM), scanning electronic microscopy (SEM), X-ray diffraction, gas chromatography and atomic absorption spectrophotometry were used to investigate the biodegradation of dimethoate, the concentration variation of Ca²⁺ and Cd²⁺, the mineral and chemical compositions of the precipitates. The results showed that the growth of P. Putida could increase the pH value of the culture solution and effectively degrade the organophosphorus pesticide dimethoate. Besides, the concentration of Ca²⁺ in the culture solution decreased significantly in the first four days and then tended to be stable. Moreover, the TEM and SEM results presented that there were large amounts of biogenic sedimentary CaCO₃ and a little Ca₃(PO₄)₂ in the precipitates. Furthermore, in the employed culture system, the removal rates of Cd²⁺, when added at two different concentrations (6 ppm and 15 ppm), reached 100%. Therefore, this study provided a new idea for treating wastewater polluted with organophosphorus pesticide and heavy metals by using microorganisms.     

Spatial variation in population dynamics of juvenile Atlantic salmon: implications for conservation and management

Application of habitat models for predicting expected local densities of Atlantic Salmon Salmo salar in healthy populations has been hampered by a lack of generality in their fit to data from different systems. It is believed that this problem results at least in part from difficulties of effectively integrating factors that act across a range of spatial and temporal scales. Here, as an aid to developing more robust modelling and sampling methodologies, a simple process‐based model for local‐scale dynamics of Atlantic salmon juveniles is developed from first principles by integrating contemporary understanding of self‐thinning, density‐dependent growth and dispersal. The aim is to present a readily understood structure to illustrate the links between spawning and stocking strategies, habitat, migration and fish production. Based on this structure, contemporary understanding of the more complex biological processes that affect density, growth and habitat are discussed in relation to some of the key requirements of managers, including stocking for rehabilitation, assessment of predation impact and development of strategies for sampling populations effectively when deriving habitat‐production models. A major conclusion is that more structured, integrated research is required to provide the basic variables needed to model links between local and global scale habitat and fish production effectively. Nevertheless, application of the current understanding of the biology of Atlantic salmon should be of great benefit to managers in extracting key information from field surveys.     

Evidence for cooperative and domain-specific binding of the signal transducing adaptor molecule 2 (STAM2) to Lys63-linked diubiquitin

As the upstream component of the ESCRT (endosomal sorting complexes required for transport) machinery, the ESCRT-0 complex is responsible for directing ubiquitinated membrane proteins to the multivesicular body pathway. ESCRT-0 is formed by two subunits known as Hrs (hepatocyte growth factor-regulated substrate) and STAM (signal transducing adaptor molecule), both of which harbor multiple ubiquitin-binding domains (UBDs). In particular, STAM2 possesses two UBDs, the VHS (Vps27/Hrs/Stam) and UIM (ubiquitin interacting motif) domains, connected by a 20-amino acid flexible linker. In the present study, we report the interactions of the UIM domain and VHS-UIM construct of STAM2 with monoubiquitin (Ub), Lys(48)- and Lys(63)-linked diubiquitins. Our results demonstrate that the UIM domain alone binds monoubiquitin, Lys(48)- and Lys(63)-linked diubiquitins with the same affinity and in the same binding mode. Interestingly, binding of VHS-UIM to Lys(63)-linked diubiquitin is not only avid, but also cooperative. We also show that the distal domain of Lys(63)-linked diubiquitin stabilizes the helical structure of the UIM domain and that the corresponding complex adopts a specific structural organization responsible for its greater affinity. In contrast, binding of VHS-UIM to Lys(48)-linked diubiquitin and monoubiquitin is not cooperative and does not show any avidity. These results may explain the better sorting efficiency of some cargoes polyubiquitinated with Lys(63)-linked chains over monoubiquitinated cargoes or those tagged with Lys(48)-linked chains.     

Effect of Mg2+ on the Structure and Function of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase

Mg²⁺ in various concentrations was added to purified Rubisco in vitro to gain insight into the mechanism of molecular interactions between Mg²⁺ and Rubisco. The enzyme activity assays showed that the reaction between Rubisco and Mg²⁺ was two order, which means that the enhancement of Rubisco activity was accelerated by low concentration of Mg²⁺ and slowed by high concentration of Mg²⁺. The kinetics constant (K _m) and V _max was 1.91 μM and 1.13 μmol CO₂ mg⁻¹ protein∙min⁻¹, respectively, at a low concentration of Mg²⁺, and 3.45 μM and 0.32 μmol CO₂∙mg⁻¹ protein∙min⁻¹, respectively, at a high concentration of Mg²⁺. By UV absorption and fluorescence spectroscopy assays, the Mg²⁺ was determined to be directly bound to Rubisco; the binding site of Mg²⁺ to Rubisco was 0.275, the binding constants (K _A) of the binding site were 6.33 × 10⁴ and 5.5 × 10⁴ l·mol⁻¹. Based on the analysis of the circular dichroism (CD) spectra, it was concluded that the binding of Mg²⁺ did not alter the secondary structure of Rubisco, suggesting that the observed enhancement of Rubisco carboxylase activity was caused by a subtle structural change in the active site through the formation of the complex with Mg²⁺.     

Connecting seas: western Palaearctic continental flyway for water birds in the perspective of changing land use and climate

The western Palaearctic continental flyway that connects the tundra and taiga belts of Russia with north‐west Europe is the major migratory avenue for an estimated 9.3 million herbivorous water birds (swans, geese and ducks). Agricultural practices together with protection measures subsidize the carrying capacity of winter habitats of the birds. Densities of these birds are highest in the Netherlands, where nitrogen (N) inputs to farmland have increased during the last 70 years and became the highest in Europe (>250 kg manure and fertilizer ha^?1 yr^?1). A comparison of population trends of 13 species of avian herbivores reveals generally expanding populations in the past 50 years, with the greatest increases from 1970 to 1990. Populations of the smallest avian herbivores, such as ducks, are either stable or have peaked and are now in decline, whereas numbers of larger herbivores (geese and swans) continue to increase and barnacle and greylag geese now breed in the Netherlands, in addition to northern sites. During the northerly spring migration, stop‐over sites, mostly in the agricultural regions of eastern Europe and Scandinavia, lie between the 3 and 6°C mean daily temperature isotherms in April, temperatures at which grasses start to grow, where flooding of riparian wetlands frequently occurs and fertilizers are applied to farmland. However, the restructuring of agricultural practices in an enlarged EU is likely to affect water bird populations and their migration routes. The reduced use of N in the Netherlands is predicted to constrain population growth, especially of the smallest avian herbivores with their high basal metabolic rates, because of the declining food quality of grass leaves. The introduction of large‐scale farming of oilseed rape, winter cereals, sugar beet and potatoes at the expense of grassland also will adversely affect these birds, whereas larger species are likely to continue exploiting these crops.     

Plant-Herbivore Interaction and Its Consequences for Succession in Wetland Ecosystems: A Modeling Approach

Herbivore grazing is increasingly used as a management tool to prevent the dominance of vegetation by tall grasses or trees. In this report, a model is described that is used to analyze plant-herbivore interactions and their scaling up to landscape scale. The model can be used to predict effects of herbivory on vegetation development. The model is an ecosystem model including modules for carbon and nitrogen cycling through plants, soil organic matter, and atmosphere. Plants compete for light and nitrogen. An herbivory module is included that implements selective foraging by a herbivore in a spatially heterogeneous area. Simulations were done to analyze the effects of herbivore density on vegetation dynamics, to analyze the impact of soil fertility on maximum herbivore density, and to analyze effects of herbivore density on landscapes. Two important points come forward from the model. Maximum herbivore abundance shows a hump-shaped curve along a soil fertility gradient. At higher soil fertility, light competition becomes more important. Herbivory interferes with plant competition, giving the tall, less palatable species a competitive advantage and thereby reducing the food quality and availability and hence the carrying capacity of the area. At a landscape scale, herbivory leads to increased heterogeneity. This increased heterogeneity may increase carrying capacity. The implications of these points for nature management are discussed. Received 13 May 1998; accepted 23 November 1998.     

Ecological restoration and recovery in the wind-blown sand hazard areas of northern China: relationship between soil water and carrying capacity for vegetation in the Tengger Desert

The main prevention and control area for wind-blown sand hazards in northern China is about 320000 km2 in size and includes sandlands to the east of the Helan Mountain and sandy deserts and desert-steppe transitional regions to the west of the Helan Mountain.Vegetation recovery and restoration is an important and effective approach for constraining wind-blown sand hazards in these areas.After more than 50 years of long-term ecological studies in the Shapotou region of the Tengger Desert,we found that revegetation changed the hydrological processes of the original sand dune system through the utilization and space-time redistribution of soil water.The spatiotemporal dynamics of soil water was significantly related to the dynamics of the replanted vegetation for a given regional precipitation condition.The long-term changes in hydrological processes in desert areas also drive replanted vegetation succession.The soil water carrying capacity of vegetation and the model for sand fixation by revegetation in aeolian desert areas where precipitation levels are less than 200 mm are also discussed.     

短期速效胰岛素联合长效胰岛素强化治疗对初诊2型糖尿病患者胰岛功能及氧化应激的影响

目的：探讨短期速效胰岛素联合长效胰岛素强化治疗方案对初诊2型糖尿病患者胰岛功能及氧化应激的影响。方法：选择30例初诊2型糖尿病患者,在一般治疗的基础上,应用短期速效胰岛素联合长效胰岛素强化治疗方案进行治疗,检测并比较患者治疗前后一般血清指标包括空腹血糖（FBG）、餐后2小时血糖（2h PPG）、糖化血红蛋白（HbA1c）、血清C肽（FCP）,胰岛细胞功能指标包括胰岛素曲线下面积（AUG）、β细胞功能稳态模型评估（HOMA-B）、I30/G30、胰岛素抵抗指数（HOMA-IR）、胰岛素及C肽水平,以及氧化应激指标包括丙二醛（MDA）及超氧化物岐化酶（SOD）。结果：（1）与治疗前相比,患者治疗后FPG、2h PPG、HbA1c、AUG、HomaB、HomaIR及I30/G30水平均显著改善,差异均有统计学意义（P均〈0.05）;患者口服糖耐量试验0h、1h及2h胰岛素水平及C肽水平均显著回升,差异有统计学差异（P〈0.05）。（2）治疗后,患者MDA水平显著降低,SOD水平显著升高,其差异有统计学意义（P〈0.05）。结论：短期速效胰岛素联合长效胰岛素强化治疗方案可以明显改善初诊2型糖尿病患者胰岛功能,降低患者体内的氧化应激水平。     

Damage Function and Economic Threshold for Belonolaimus longicaudatus on Potato

Belonolaimus longicaudatus has long been recognized as a pathogen of potato (Solanum tuberosum). However, a damage function relating expected yield of potato to population densities of B. longicaudatus at planting has not been derived, and the economic threshold for nematicide application is unknown. The objectives of this study were to derive the damage function of B. longicaudatus on potato and to calculate the economic threshold population density. The damage function data for B. longicaudatus on potato were obtained from an ongoing field study to evaluate cropping systems and nematode management practices. Soil samples were collected from experimental field plots, and nematodes were extracted from a 130-cm³ subsample with a centrifugal-flotation method. A damage function was derived by linear regression of potato yield on nematode population density at planting. Based on this derived damage function and published potato prices, the economic threshold for nematicide application was calculated at 2 to 3 B. longicaudatus/130 cm³ of soil, which was near the detection threshold based on methodology used in this study.     

A Novel Method for Assessing Proximal and Distal Forelimb Function in the Rat: the Irvine,Beatties and Bresnahan (IBB) Forelimb Scale

Several experimental models of cervical spinal cord injury (SCI) have been developed recently to assess the consequences of damage to this level of the spinal cord (Pearse et al., 2005, Gensel et al., 2006, Anderson et al., 2009), as the majority of human SCI occur here (Young, 2010; www.sci-info-pages.com). Behavioral deficits include loss of forelimb function due to damage to the white matter affecting both descending motor and ascending sensory systems, and to the gray matter containing the segmental circuitry for processing sensory input and motor output for the forelimb. Additionally, a key priority for human patients with cervical SCI is restoration of hand/arm function (Anderson, 2004). Thus, outcome measures that assess both proximal and distal forelimb function are needed. Although there are several behavioral assays that are sensitive to different aspects of forelimb recovery in experimental models of cervical SCI (Girgis et al., 2007, Gensel et al., 2006, Ballerman et al., 2001, Metz and Whishaw, 2000, Bertelli and Mira, 1993, Montoya et al., 1991, Whishaw and Pellis, 1990), few techniques provide detailed information on the recovery of fine motor control and digit movement.The current measurement technique, the Irvine, Beatties and Bresnahan forelimb scale (IBB), can detect recovery of both proximal and distal forelimb function including digit movements during a naturally occurring behavior that does not require extensive training or deprivation to enhance motivation. The IBB was generated by observing recovery after a unilateral C6 SCI, and involves video recording of animals eating two differently shaped cereals (spherical and doughnut) of a consistent size. These videos were then used to assess features of forelimb use, such as joint position, object support, digit movement and grasping technique.The IBB, like other forelimb behavioral tasks, shows a consistent pattern of recovery that is sensitive to injury severity. Furthermore, the IBB scale could be used to assess recovery following other types of injury that impact normal forelimb function.     

Structure,Function, and Regulation of the Three β-Adrenergic Receptors

Three β-adrenergic receptor subtypes are now known to be functionally expressed in mammals. All three belong to the R₇G family of receptors coupled to G-proteins, and characterized by an extracellular glycosylated N-terminal and an intracellular C-terminal region and seven transmembrane domains, linked by three exta- and three intracellular loops. The catecholamine ligand binding domain, studied using affinity-labeling and site-directed mutagenesis, is a pocket lined by residues belonging to the transmembrane domains. The region responsible for the interaction with the Gs protein which, when activated, stimulates adenylyl cyclase, is composed of residues belonging to the parts most proximal to the membrane of intracellular loop i₃ and the C-terminal region. The pharmacology of the three subtypes is quite distinct: in fact most of the potent β₁/β₂ antagonists (the well known β blockers) act as agonists on β₃. The subtype is resistant to short-term desensitization mediated by phosphorylation through PKA or βARK, in stark contrast to the β₁ or β₂ subtypes. Various compounds (dexamethasone, butyrate, insulin) up regulate β₁ or β₁ subtypes while down-regulating β₃ whose expression strictly correlates with differentiation of 3T3-F442A fibroblasts into adipocytes, thus confirming that the expression of the three subtypes may each be regulated independently to exert a specific physiologic role in different tissues or at different stages of development.     

舒芬太尼静脉自控镇痛对于腹部手术后患者的镇痛效果及胃肠功能的影响

目的：探讨舒芬太尼静脉自控镇痛对于腹部手术后患者的镇痛效果及胃肠功能的影响。方法：将120例腹部手术随机分为芬太尼组与舒芬太尼组,每组各60例。两组患者分别接受芬太尼和舒芬太尼静脉自控镇痛,采用疼痛视觉模拟评分（VAS）评估镇痛效果,同时比较两组患者胃肠功能恢复时间及不良反应发生率。结果：术后6 h、12 h、24 h、48 h舒芬太尼组VAS评分显著低于芬太尼组（P〈0.05）;舒芬太尼组肠蠕动恢复时间、排气时间及排便时间显著早于芬太尼组（P〈0.05）;舒芬太尼组与芬太尼组不良反应发生率分别为18.3%和41.7%,差别具有统计学意义（P〈0.05）。结论：与芬太尼相比,舒芬太尼静脉自控镇痛用于腹部手术后患者镇痛效果好,胃肠功能恢复早且不良反应少。