Global pattern of carbon stable isotopes of suspended particulate organic matter in lakes

Carbon stable isotopes (??¹³C) of particulate organic matter (POM) are useful indicators for tracking the sources of organic matter, CO₂ concentrations, primary productivity and the trophic base in lakes. Here we provide a synthesis of literature data from 228 lakes around the world to assess the distribution pattern of ??¹³C_POM along latitudinal, morphometric and biogeochemical gradients, and the feasibility of utilizing ??¹³C_POM as an indicator for lake metabolism. Results from this analysis revealed a large variation in ??¹³C_POM among lakes with a range from ?46.2 to ?13.0?? and a median of ?29.7??. The ??¹³C_POM generally decreased from low to high latitude along with the decreases in total phosphorus (TP), pH, lake size and the increases in partial pressure of CO₂. The combination of these factors may play a significant role in shaping the pattern of ??¹³C_POM distribution. A multiple regression model using matching data (n?=?92 lakes) indicated that latitude, lake size and TP concentration were the important factors determining ??¹³C_POM, although only 25% of the variance in ??¹³C_POM was explained by the model. Compared to the average ??¹³C value (?27??) of terrestrial plants, 165 lakes (72%) in this analysis were isotopically depleted in ??¹³C_POM, with a mean of ?31.5??, which is indicative of an allochthonous contribution of terrestrial organic matter. This finding is consistent with the view that the majority of lakes in the world receive a terrestrial subsidy of carbon and are sources of CO₂ to the atmosphere.     

Zebra mussel δ 13C and δ 15N as a proxy for depth-specific pelagic isotope profiles and lake temperature

Zebra mussels (Dreissena polymorpha) can be used to provide a baseline stable isotope signature, time-integrated with primary production. However, since zebra mussels are uncommon in pelagic zones, their potential as reference species in pelagic water columns has not been fully explored. By investigating mussels growing suspended on a single vertical cable in Lake Constance, we were able to document seasonal (April, May, and August) and depth-dependent (0–22 m) variation in mussel δ ¹⁵Ν and δ ¹³C. We found a strong correlation between temperature and mussel δ ¹⁵N from differing depths_; and a strong relationship between temperature and Δ¹⁵Ν (estimated as δ ¹⁵Ν_mussel ? δ ¹⁵Ν_POM) and Δ¹³C (δ ¹³C_mussel ? δ ¹³C_POM). In a pattern that remained consistent over all months, Δ¹⁵Ν decreased with temperature, to the extent that negative values were recorded at temperatures >13°C. Utilizing cable-dwelling pelagic mussels as indicators of variation in isotope and temperature for pelagic water could be used as a novel field approach, comparable to in situ experimentation. We suggest that the pelagic mussel approach can be employed in tandem with benthic or littoral mussel isotope values, to develop mussel-based lake isoscapes. Such isoscapes may be pertinent to the study of seasonal trophic limnoecology and in tracking the movements of animals.     

Use of stable isotopes to understand food webs in Macao wetlands

In this study, components of the food-web in Macao wetlands were quantified using stable isotope ratio techniques based on carbon and nitrogen values. The δ¹³C and δ¹⁵N values of particulate organic matter (δ¹³C_POM and δ¹⁵N_POM, respectively) ranged from ?30.64 ± 1.0 to ?28.1 ± 0.7 ‰, and from ?1.11 ± 0.8 to 3.98 ± 0.7 ‰, respectively. The δ¹³C values of consumer species ranged from ?33.94 to ?16.92 ‰, showing a wide range from lower values in a freshwater lake and inner bay to higher values in a mangrove forest. The distinct dietary habits of consumer species and the location-specific food source composition were the main factors affecting the δ¹³C values. The consumer ¹⁵N-isotope enrichment values suggested that there were three trophic levels; primary, secondary, and tertiary. The primary consumer trophic level was represented by freshwater herbivorous gastropods, filter-feeding bivalves, and plankton-feeding fish, with a mean δ¹⁵N value of 5.052 ‰. The secondary consumer level included four deposit-feeding fish species distributed in Fai Chi Kei Bay and deposit-feeding gastropods in the Lotus Flower Bridge flat, with a mean δ¹⁵N value of 6.794 ‰. The tertiary consumers group consisted of four crab species, one shrimp species, and four fish species in the Lotus Flower Bridge Flat, with a mean δ¹⁵N value of 13.473 ‰. Their diet mainly comprised organic debris, bottom fauna, and rotten animal tissues. This study confirms the applicability of the isotopic approach in food web studies.     

The relationship between carbon and nitrogen stable isotopes of zooplankton and select environmental variables in low-latitude reservoirs

Cyclopoids were collected from 18 reservoirs in southern China during August (a wet month) and December (a dry month) of 2010 for the analysis of carbon and nitrogen stable isotopes (δ¹³C_Zoo and δ¹⁵N_Zoo). The objectives of this study were to examine whether δ¹³C_Zoo and δ¹⁵N_Zoo can be better indicators of primary productivity and trophic state than the stable isotope composition of suspended particulate organic matter (POM), and to evaluate the relationship between δ¹³C_Zoo and δ¹⁵N_Zoo and select environmental variables. The δ¹³C_Zoo in these reservoirs was enriched in August and depleted in December, and varied significantly along the continuum of trophic levels. By contrast, δ¹⁵N_Zoo was depleted in August and enriched in December, and did not increase significantly with an increase in trophic state. Both δ¹³C_Zoo and δ¹⁵N_Zoo were more strongly correlated with environmental factors than δ¹³C_POM and δ¹⁵N_POM were. In addition, more environmental factors were significantly correlated with δ¹³C_Zoo and the δ¹⁵N_Zoo than with δ¹³C_POM and δ¹⁵N_POM. When data from two seasons were pooled, δ¹³C_Zoo was strongly correlated with dissolved inorganic nitrogen (DIN), soluble reactive phosphorus (SRP) and the DIN:SRP ratio, while δ¹⁵N_Zoo was weakly correlated with nutrient concentrations. This study indicates that, compared to the stable isotope composition of POM, δ¹³C_Zoo is a better indicator of primary productivity and trophic state, while δ¹⁵N_Zoo may be used as a proxy for nitrogen sources in aquatic ecosystems.     

Trophic structure and major trophic links in conventional versus organic farming systems as indicated by carbon stable isotope ratios of fatty acids

Using bulk tissue and fatty acid ¹³C analysis we investigated major trophic pathways from soil microorganisms to microbial consumers to predators in conventional versus organic farming systems planted for the first time with maize. Organic farming led to an increase in microbial biomass in particular that of fungi as indicated by phospholipid fatty acids (PLFAs). Microbial PLFAs reflected the conversion from C₃ to C₄ plants by a shift in δ¹³C of 2‰, whereas the isotopic signal in fatty acids (FAs) of Collembola was much more pronounced. In the euedaphic Protaphorura fimata the δ¹³C values in maize fields exceeded that in C₃ (soybean) fields by up to 10‰, indicating a close relationship between diet and vegetation cover. In the epedaphic Orchesella villosaδ¹³C values shifted by 4‰, suggesting a wider food spectrum including carbon of former C₃ crop residues. Differences in δ¹³C of corresponding FAs in consumers and resources were assessed to assign food web links. P. fimata was suggested as root and fungal feeder in soybean fields, fungal feeder in conventional and leaf consumer in organically managed maize fields. O. villosa likely fed on root and bacteria under soybean, and bacteria and fungi under maize. Comparison of δ¹³C values in FAs of the cursorial spider Pardosaagrestis and O. villosa implied the latter as important prey species in soybean fields. In contrast, the web‐building spider Mangora acalypha showed no predator–prey relationship with Collembola. The determination of δ¹³C values in trophic biomarker FAs allowed detailed insight into the structure of the decomposer food web and identified diet‐shifts in both consumers at the base of the food web and in top predators in organic versus conventional agricultural systems. The results indicate changes in major trophic links and therefore carbon flux through the food web by conversion of conventional into organic farming systems.     

Patterns and controls of seasonal variability of carbon stable isotopes of particulate organic matter in lakes

Carbon stable isotopes (δ¹³C) of particulate organic matter (POM) have been used as indicators for energy flow, primary productivity and carbon dioxide concentration in individual lakes. Here, we provide a synthesis of literature data from 32 freshwater lakes around the world to assess the variability of δ¹³C_POM along latitudinal, morphometric and biogeochemical gradients. Seasonal mean δ¹³C_POM, a temporally integrated measure of the δ¹³C_POM, displayed weak relationships with all trophic state indices [total phosphorus (TP), total nitrogen (TN), and chlorophyll a (Chl a)], but decreased significantly with the increase in latitude, presumably in response to the corresponding decrease in water temperature and increase in CO₂ concentration. The seasonal minimum δ¹³C_POM also correlated negatively with latitude while seasonal maximum δ¹³C_POM correlated positively with all trophic state indices, pH, and δ¹³C of dissolved inorganic carbon (DIC). Seasonal amplitude of δ¹³C_POM (the difference between seasonal maximum and minimum values) correlated significantly with pH, TP and Chl a concentrations and displayed small variations in oligotrophic, mesotrophic and low latitude eutrophic lakes, which is attributed to low primary productivity and abundant non-living POM in the low trophic state lakes and relatively stable environmental conditions in the subtropics. Seasonal amplitude of δ¹³C_POM was the greatest in high latitude eutrophic lakes. Greater seasonal changes in solar energy and light regime may be responsible for the large seasonal variability in high latitude productive lakes. This synthesis provides new insights on the factors controlling variations in stable carbon isotopes of POM among lakes on the global scale.     

Evaluation of commercial and natural food in experimental cultures of white shrimp based on stable carbon isotopes

The farming of shrimp is developing quickly worldwide, and recently, ingredients such as seaweeds in low proportion (25 to 4 %), incorporated into the commercial food, have been shown to improve the shrimp productive variables. The change of commercial foods to commercial feed with a proportion of natural food, and finally, to natural food has been little and simultaneously evaluated. The aim of our study was to determine the relative contribution of dietary carbon to the growth of Litopenaeus vannamei fed with a proportion of 4 % Sargassum (δ¹³C = ?20.9?±?0.05?‰), 4 % Ulva (δ¹³C = ?20.6?±?0.6?‰) meal, and a control diet (δ¹³C?=??22.6?±?0.2?‰) in 60-L tanks for 30 days, and finally, with the green seaweed Ulva spp. (δ¹³C = ?13.2?±?0.25?‰) and Ulva meal (δ¹³C = ?14.5?±?0.6?‰) in open-air ponds for 120 days, by measuring δ¹³C for each of the foods and in the muscle of shrimp. After 15 days, the rates of metabolic turnover (Δ¹³C = δ¹³C_shrimp ? δ¹³C_food) were constant until the end of the experiment in the tanks. The muscle of shrimp assimilated carbon from all diets, which demonstrated the potential use of combined diets and the optimization of their use in diets containing seaweed. Our data will be useful in future interpretations of field and laboratory isotopic values for this species.     

Variation in bulk tissue, fatty acid and monosaccharide δ13C values between autotrophic and heterotrophic plant organs

The flowers of 23 species of grass and herb plants were collected from a mesotrophic grassland to assess natural variability in bulk, monosaccharide and fatty acid δ¹³C values from one plant community and were compared with previous analyses of leaves from the same species. The total mean bulk δ¹³C value of flower tissues was −28.1‰, and there was no significant difference between the mean δ¹³C_flower values for grass (−27.8‰) and herb (−28.2‰) species. On average bulk δ¹³C_flower values were 1.1‰ higher than bulk δ¹³C_leaf values, however, the δ¹³C_flower and δ¹³C_leaf values of grasses did not differ between organs suggesting that carbon isotope discrimination is different in grass and herb species. The abundance of different monosaccharides abundance varied between plant types, i.e. xylose concentrations in the grass flowers were as high as 40%, compared with up to 15% in the herb species, but the general relationship δ¹³C_arabinose > δ¹³C_xylose > δ¹³C_glucose > δ¹³C_galactose which had been observed in leaves was similar in flowers (total mean δ¹³C values = −25.9‰, −27.2‰, −28.8‰ and −28.1‰, respectively). However, the average 5.4‰ depletion in the δ¹³C values of the C_16:0, C_18:2 and C_18:3 fatty acids in flowers compared to bulk tissue was significantly greater than observed for leaves. The trend C_16:0 < C_18:2 < C_18:3 previously observed in leaves was also observed in grass flowers (δ¹³C_C16:0 = −33.8‰; δ¹³C_C18:2 = −33.1‰; δ¹³C_C18:3 = −34.2‰) but not herb flowers (δ¹³C_C16:0 = −34.1‰; δ¹³C_C18:2 = −32.4‰; δ¹³C_C18:3 = −34.5‰). We conclude: (i) that the biological processes influencing carbon isotope discrimination in grass flowers are different from herbs flowers; and, (ii) that a range of post-photosynthetic fractionation effects caused the observed differences between flower and leaf δ¹³C values, especially the significant ¹³C-depletion in flower fatty acid δ¹³C values.     

To What Extent Do Food Preferences Explain the Trophic Position of Heterotrophic and Mixotrophic Microbial Consumers in a Sphagnum Peatland?

Although microorganisms are the primary drivers of biogeochemical cycles, the structure and functioning of microbial food webs are poorly studied. This is the case in Sphagnum peatlands, where microbial communities play a key role in the global carbon cycle. Here, we explored the structure of the microbial food web from a Sphagnum peatland by analyzing (1) the density and biomass of different microbial functional groups, (2) the natural stable isotope (δ ¹³C and δ ¹⁵N) signatures of key microbial consumers (testate amoebae), and (3) the digestive vacuole contents of Hyalosphenia papilio, the dominant testate amoeba species in our system. Our results showed that the feeding type of testate amoeba species (bacterivory, algivory, or both) translates into their trophic position as assessed by isotopic signatures. Our study further demonstrates, for H. papilio, the energetic benefits of mixotrophy when the density of its preferential prey is low. Overall, our results show that testate amoebae occupy different trophic levels within the microbial food web, depending on their feeding behavior, the density of their food resources, and their metabolism (i.e., mixotrophy vs. heterotrophy). Combined analyses of predation, community structure, and stable isotopes now allow the structure of microbial food webs to be more completely described, which should lead to improved models of microbial community function.     

Watershed Effects on Chemical Properties of Sediment and Primary Consumption in Estuarine Tidal Flats: Importance of Watershed Size and Food Selectivity by Macrobenthos

Particulate organic matter transported from rivers to estuaries (POM_R) varies quantitatively and qualitatively across estuaries; however, a lack of comparative studies poses a challenge in general understanding of responses of estuarine food webs to POM_R input. We studied 20 estuarine tidal flats of the Pacific Northwest coast of North America, with watershed areas ranging from 7 to 8000 km². We used carbon-stable isotope (δ¹³C) to test the hypothesis that the nutritional contribution of POM_R to macrobenthos is proportional to relative abundances of POM_R in tidal flat sediments. The predominant origin of total POM (TPOM) in tidal flat sediments generally shifted from marine-origin POM (POM_M) to POM_R as watershed area increased; however, terrestrial-origin POM_R with high C/N predominated sediment TPOM even in estuaries with small watershed areas. Some macrobenthos species assimilated POM sources in proportion to sediment TPOM composition, and incorporated POM_R in POM_R-predominant sediments. These species were considered to have low food selectivity; however, the relative nutritional contribution of POM_R to these macrobenthos was still lower than the fraction of POM_R in sediment TPOM. Other species disproportionately utilized POM_M and/or benthic microalgae regardless of the relative abundance of POM_R, indicating their high food selectivity. The species-specific, low- or high-food selectivity was likely linked with deposit-feeding and filter-feeding, respectively. Hence, our hypothesis was supported conditionally. Our findings indicate that watershed area, relative abundance of POM_R in an estuary, and food selectivity of estuarine species are key factors controlling the tightness of linkage between watersheds and estuarine food webs.     

Seasonal variations in bulk tissue, fatty acid and monosaccharide δC values of leaves from mesotrophic grassland plant communities under different grazing managements

Leaves of 26 grass, herb, shrub and tree species were collected from mesotrophic grasslands to assess natural variability in bulk, fatty acid and monosaccharide δ¹³C values under different grazing management (cattle- or deer-grazed) on three sample dates (May, July and October) such that interspecific and spatiotemporal variations in whole leaf tissues and compound-specific δ¹³C values could be determined. The total mean leaf bulk δ¹³C value for plants was −28.9‰ with a range of values spanning 7.5‰. Significant interspecific variation between bulk leaf δ¹³C values was only determined in October (P = <0.001) when δ¹³C values of the leaf tissues from both sites was on average 1.5‰ depleted compared to during July and May. Samples from May were significantly different between fields (P = 0.03) indicating an effect from deer- or cattle-grazing in young leaves. The average individual monosaccharide δ¹³C value was 0.8‰ higher compared with whole leaf tissues. Monosaccharides were the most abundant components of leaf biomass, i.e. arabinose, xylose, mannose, galactose and glucose, and therefore, fluctuations in their individual δ¹³C values had a major influence on bulk δ¹³C values. An average depletion of ca. 1‰ in the bulk δ¹³C values of leaves from the deer-grazed field compared to the cattle-grazed field could be explained by a general depletion of 1.1‰ in glucose δ¹³C values, as glucose constituted >50% total leaf monosaccharides. In October, δ¹³C values of all monosaccharides varied between species, with significant variation in δ¹³C values of mannose and glucose in July, and mannose in May. This provided an explanation for the noted variability in the tissue bulk δ¹³C values observed in October 1999. The fatty acids C_16:0, C_18:2 and C_18:3 were highly abundant in all plant species. Fatty acid δ¹³C values were lower than those of bulk leaf tissues; average values of −37.4‰ (C_16:0), −37.0‰ (C_18:2) and −36.5‰ (C_18:3) were determined. There was significant interspecific variation in the δ¹³C values of all individual fatty acids during October and July, but only for C_18:2 in May (P = <0.05). This indicated that seasonal trends observed in the δ¹³C values of individual fatty acids were inherited from the isotopic composition of primary photosynthate. However, although wide diversity in δ¹³C values of grassland plants ascribed to grazing management, interspecific and spatiotemporal influences was revealed, significant trends (P = <0.0001) for fatty acid and monosaccharide δ¹³C values: δ¹³C_16:0 < δ¹³C_18:2 < δ¹³C_18:3 and δ¹³C_arabinose > δ¹³C_xylose > δ¹³C_glucose > δ¹³C_galactose, respectively, previously described, appear consistent across a wide range of species at different times of the year in fields under different grazing regimes.     

Trophodynamics and functional feeding groups of North Sea fauna: a combined stable isotope and fatty acid approach

The trophodynamics of pelagic and benthic animals of the North Sea, North Atlantic shelf, were assessed using stable isotope analysis (SIA) of natural abundance carbon and nitrogen isotopes, lipid fingerprinting and compound-specific SIA (CSIA) of phospholipid-derived fatty acids (PLFAs). Zooplankton (z), epi- and supra-benthic macrofauna were collected in the Southern Bight, at the Oyster Grounds and at North Dogger, 111 km north of the Dogger Bank. The study included 22 taxonomic groups with particular reference to Mollusca (Bivalvia and Gastropoda) and Crustacea. Primary consumers (Bivalvia) were overall most ¹⁵N enriched in the southern North Sea (6.1‰) and more depleted in the Oyster Grounds (5.5‰) and at North Dogger (2.8‰) demonstrating differences in isotopic baselines for bivalve fauna between the study sites. Higher trophic levels also followed this trend. Over an annual cycle, consumers tended to exhibit ¹⁵N depletion during spring followed by ¹⁵N enriched signatures in autumn and winter. The observed seasonal changes of δ ¹⁵N were more pronounced for suspension feeders and deposit feeders (dfs) than for filter feeders (ffs). The position of animals in plots of δ ¹³C and δ ¹⁵N largely concurred with the expected position according to literature-based functional feeding groups. PLFA fingerprints of groups such as z were distinct from benthic groups, e.g. benthic ffs and dfs, and predatory macrobenthos. δ ¹³C_PLFA signatures indicated similarities in ¹³C moiety sources that constituted δ ¹³C_PLFA. Although functional groups of pelagic zooplankton and (supra-) benthic animals represented phylogenetically distinct consumer groups, δ ¹³C_PLFA demonstrated that both groups were supported by pelagic primary production and relied on the same macronutrients such as PLFAs. Errors related to the static categorization of small invertebrates into fixed trophic positions defined by phylogenetic groupings rather than by functional feeding groups, and information on seasonal trophodynamic variability, may have implications for the reliability of numerical marine ecosystem models.     

Determination of food sources and trophic position in Malaysian tropical highland streams using carbon and nitrogen stable isotopes

Stable isotope analysis has been extensively used as an effective tool in determination of trophic relationship in ecosystems. In freshwater ecosystem, aquatic invertebrates represent main component of a river food web. This study was carried out to determine potential food sources of freshwater organism together with pattern of trophic position along the river food web. In this study, rivers of Belum-Temengor Forest Complex (BTFC) has been selected as sampling site as it is a pristine area that contains high diversity and abundance of organisms and can be a benchmark for other rivers in Malaysia. Stable isotope ratios of carbon (δ¹³C) and nitrogen (δ¹⁵N) were applied to estimate trophic position and food web paradigm. Analysis of stable isotopes based on organic material collected from the study area revealed that the highest δ¹³C value was reported from filamentous algae (? 22.68 ± 0.126⁰/₀₀) and the lowest δ¹³C was in allocthonous leaf packs (? 31.58 ± 0.187⁰/₀₀). Meanwhile the highest δ¹⁵N value was in fish (8.45 ± 0.177⁰/₀₀) and the lowest value of δ¹⁵N was in autochthonous aquatic macrophyte (2.00 ± 1.234⁰/₀₀). Based on the δ¹⁵N results, there are three trophic levels in the study river and it is suggested that the trophic chain begins with organic matter followed by group of insects and ends with fish (organic matter < insects < fish).     

Evaluation of Methyl Bromide Alternatives Efficacy against Soil-Borne Pathogens,Nematodes and Soil Microbial Community

Methyl bromide (MB) and other alternatives were evaluated for suppression of Fusarium spp., Phytophthora spp., and Meloidogyne spp. and their influence on soil microbial communities. Both Fusarium spp. and Phytophthora spp. were significantly reduced by the MB (30.74 mg kg^-1), methyl iodide (MI: 45.58 mg kg^-1), metham sodium (MS: 53.92 mg kg^-1) treatments. MS exhibited comparable effectiveness to MB in controlling Meloidogyne spp. and total nematodes, followed by MI at the tested rate. By contrast, sulfuryl fluoride (SF: 33.04 mg kg^-1) and chloroform (CF: 23.68 mg kg^-1) showed low efficacy in controlling Fusarium spp., Phytophthora spp., and Meloidogyne spp. MB, MI and MS significantly lowered the abundance of different microbial populations and microbial biomass in soil, whereas SF and CF had limited influence on them compared with the control. Diversity indices in Biolog studies decreased in response to fumigation, but no significant difference was found among treatments in PLFA studies. Principal component and cluster analyses of Biolog and PLFA data sets revealed that MB and MI treatments greatly influenced the soil microbial community functional and structural diversity compared with SF treatment. These results suggest that fumigants with high effectiveness in suppressing soil-borne disease could significantly influence soil microbial community.     

Fractionation of stable isotopes in the Arctic marine copepod Calanus glacialis: Effects on the isotopic composition of marine particulate organic matter

Fractionation of δ¹³C and δ¹⁵N between food, consumer, and faecal pellets was studied in the Arctic marine copepod Calanus glacialis Jaschnov, fed with isotopically distinct algal monocultures. Temporal variations in δ¹³C and δ¹⁵N of copepods that were fed ice algae and phytoplankton followed those of a control group consisting of starved animals. There were no significant trends in the δ¹³C and δ¹⁵N values of copepods that were starved for 42 days, suggesting that the isotopic composition of non-lipid body tissues is unaffected by the metabolic processes during prolonged periods of starvation. The stable isotopic composition of starved copepods therefore seems to reflect food consumed during the previous period of feeding and growth. Faecal pellets produced by feeding copepods were depleted in ¹³C and ¹⁵N by 6.3-11.2‰ and 0.7-9.1‰, respectively, relative to the food ingested. These results indicate that faecal pellet production is an important pathway for the trophic fractionation of δ¹³C, whereas other fractionation pathways, such as excretion of ammonia, may be relatively more important for δ¹⁵N. The strong depletion of ¹³C in faecal pellets compared to the food suggests that grazing by herbivorous copepods on primary production adds to the variability of δ¹³C in marine particulate organic matter.     

The influence of seawater carbonate ion concentration [CO32−] on the stable carbon isotope composition of the planktic foraminifera species Globorotalia inflata

We sampled the upper water column for living planktic foraminifera along the SW-African continental margin. The species Globorotalia inflata strongly dominates the foraminiferal assemblages with an overall relative abundance of 70–90%. The shell δ¹⁸O and δ¹³C values of G. inflata were measured and compared to the predicted oxygen isotope equilibrium values (δ¹⁸O_eq) and to the carbon isotope composition of the total dissolved inorganic carbon (δ¹³C_DIC) of seawater. The δ¹⁸O of G. inflata reflects the general gradient observed in the predicted δ¹⁸O_eq profile, while the δ¹³C of G. inflata shows almost no variation with depth and the reflection of the δ¹³C_DIC in the foraminiferal shell seems to be covered by other effects. We found that offsets between δ¹⁸O_shell and predicted δ¹⁸O_eq in the surface mixed layer do not correlate to changes in seawater [CO₃²⁻].To calculate an isotopic mass balance of depth integrated growth, we used the oxygen isotope composition of G. inflata to estimate the fraction of the total shell mass that is grown within each plankton tow depth interval of the upper 500 m of the water column. This approach allows us to calculate the Δδ¹³C_{interval added-DIC}; i.e. the isotopic composition of calcite that was grown within a given depth interval. Our results consistently show that the Δδ¹³C_IA-DIC correlates negatively with in situ measured [CO₃²⁻] of the ambient water. Using this approach, we found Δδ¹³C_IA-DIC/[CO₃²⁻] slopes for G. inflata in the large size fraction (250–355 μm) of − 0.013‰ to 0.015‰ (μmol kg^− 1)^− 1 and of − 0.013‰ to 0.017‰ (μmol kg^− 1)^− 1 for the smaller specimens (150–250 μm). These slopes are in the range of those found for other non-symbiotic species, such as Globigerina bulloides, from laboratory culture experiments. Since the Δδ¹³C_IA-DIC/[CO₃²⁻] slopes from our field data are nearly identical to the slopes established from laboratory culture experiments we assume that the influence of other effects, such as temperature, are negligibly small. If we correct the δ¹³C values of G. inflata for a carbonate ion effect, the δ¹³C_shell and δ¹³C_DIC are correlated with an average offset of 2.11.     

Linking microbial activity and soil organic matter transformations in forest soils under elevated CO2

Soil organic matter (SOM) dynamics ultimately govern the ability of soil to provide long‐term C sequestration and the nutrients required for ecosystem productivity. Predicting belowground responses to elevated CO₂ requires an integrated understanding of SOM transformations and the microbial activity that governs them. It remains unclear how the microorganisms upon which these transformations depend will function in an elevated CO₂ world. This study examines SOM transformations and microbial metabolism in soils from the Duke Free Air Carbon Enrichment site in North Carolina, USA. We assessed microbial respiration and net nitrogen (N) mineralization in soils with and without elevated CO₂ exposure during a 100‐day incubation. We also traced the depleted C isotopic signature of the supplemental CO₂ into SOM and the soils' phospholipid fatty acids (PLFA), which serve as biomarkers for living cells. Cumulative net N mineralization in elevated CO₂ soils was 50% that in control soils after a 100‐day incubation. Respiration was not altered with elevated CO₂. C : N ratios of bulk SOM did not change with elevated CO₂, but incubation data suggest that the C : N ratios of mineralized organic matter increased with elevated CO₂. Values of SOM δ¹³C were depleted with elevated CO₂ (?26.7±0.2 vs. ?30.2±0.3‰), reflecting the depleted signature of the supplemental CO₂. We compared δ¹³C of individual PLFA with the δ¹³C of SOM to discern incorporation of the depleted C isotopic signature into soil microbial groups in elevated CO₂ plots. PLFA i15:0, a15:0, and 10Met18:0 reflected significant incorporation of recently produced photosynthate, suggesting that the bacterial groups defined by these biomarkers are active metabolizers in elevated CO₂ soils. At least one of these groups (actinomycetes, 10Met18:0) specializes in metabolizing less labile substrates. Because control plots did not receive an equivalent ¹³C tracer, we cannot determine from these data whether this group of organisms was stimulated by elevated CO₂ compared with these organisms in control soils. Stimulation of this group, if it occurred in the elevated CO₂ plot, would be consistent with a decline in the availability of mineralizable organic matter with elevated CO₂, which incubation data suggest may be the case in these soils.     

Spatial and temporal patterns of carbon flow in a temperate,large river food web

Using natural abundances of stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotopes, we quantified spatial and temporal patterns of carbon flow through the main channel food web in the lowland section of New Zealand’s longest river, the Waikato River. The study was undertaken with the objective of determining whether the Waikato River conforms to contemporary theoretical concepts regarding carbon flow in large river food webs. Potential organic carbon sources and invertebrate and fish consumers were sampled from three different hydrogeomorphic zones on six occasions, representing a range of seasonal and flow conditions. In line with the predictions of the riverine productivity model and riverine ecosystem synthesis, autochthonous algae and biofilms were the most important basal carbon source contributing to consumer biomass. These were often supported by C₃ aquatic macrophytes and allochthonous C₃ riparian plants. The relative importance of organic carbon sources differed between zones and appeared to change depending on season, presumably in response to water temperature and flow, particularly in the unconstrained zone of the lower river. We also demonstrate that to draw robust conclusions, consideration must be given to quantifying the isotopic signatures of organisms lower in the food web, as these can change significantly between sampling times and hydrogeomorphic zones.     

Does Drought Influence the Relationship Between Biodiversity and Ecosystem Functioning in Boreal Forests?

In mixed forests, interactions among species influence ecosystem functioning but environmental conditions also play an important role in shaping relationships between biodiversity and ecosystem functioning. In the context of climate change, the carbon and water balance in pure versus mixed forest stands may be differentially influenced by changing soil water availability. To test this hypothesis, we compared the influence of biodiversity on stand water use efficiency (WUE_S) in boreal forests between wet and dry years. We assessed the carbon isotope composition (δ ¹³C) of tree rings in Betula pendula, Pinus sylvestris, and Picea abies growing in pure versus mixed stands. In addition, we tested whether differences in WUE_S affected patterns of stand basal area increment (BAI_S). No biodiversity effect was found for stand δ ¹³C (δ ¹³C_S) during the wet year. However, there was a significant increase in δ ¹³C_S between the wet and the dry year and a significant effect of biodiversity on δ ¹³C_S in the dry year. The increase in δ ¹³C_S in mixed stands was associated with both selection and complementarity effects. Although BAI_S decreased significantly in the dry year, changes in δ ¹³C_S did not translate into variations in BAI_S along the biodiversity gradient. Our results confirmed that the physiological response of boreal forest ecosystems to changing soil water conditions is influenced by species interactions and that during dry growing seasons, species interactions in mixed stands can lead to lower soil moisture availability. This illustrates that biodiversity effects can also be negative in mixed stands in the sense that soil resources can be more intensively exhausted. Overall, our results confirm that in boreal forests, the biodiversity–ecosystem functioning relationship depends on local environmental conditions.     

Microbial 13C utilization patterns via stable isotope probing of phospholipid biomarkers in Mojave Desert soils exposed to ambient and elevated atmospheric CO2

Changes in plant inputs under changing atmospheric CO₂ can be expected to alter the size and/or functional characteristics of soil microbial communities which can determine whether soils are a C sink or source. Stable isotope probing was used to trace autotrophically fixed ¹³C into phospholipid fatty acid (PLFA) biomarkers in Mojave Desert soils planted with the desert shrub, Larrea tridentata. Seedlings were pulse‐labeled with ¹³CO₂ under ambient and elevated CO₂ in controlled environmental growth chambers. The label was chased into the soil by extracting soil PLFAs after labeling at Days 0, 2, 10, 24, and 49. Eighteen of 29 PLFAs identified showed ¹³C enrichment relative to nonlabeled control soils. Patterns of PLFA enrichment varied temporally and were similar for various PLFAs found within a microbial functional group. Enrichment of PLFA ¹³C generally occurred within the first 2 days in general and fungal biomarkers, followed by increasingly greater enrichment in bacterial biomarkers as the study progressed (Gram‐negative, Gram‐positive, actinobacteria). While treatment CO₂ level did not affect total PLFA‐C concentrations, microbial functional group abundances and distribution responded to treatment CO₂ level and these shifts persisted throughout the study. Specifically, ratios of bacterial‐to‐total PLFA‐C decreased and fungal‐to‐bacterial PLFA‐C increased under elevated CO₂ compared with ambient conditions. Differences in the timing of ¹³C incorporation into lipid biomarkers coupled with changes in microbial functional groups indicate that microbial community characteristics in Mojave Desert soils have shifted in response to long‐term exposure to increased atmospheric CO₂.