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1.
    
Previous investigations have shown that the major cellobiohydrolase of Phanerochaete chrysosporium, Cel7D (CBH 58), can be used to separate the enantiomers of a number of drugs, including adrenergic beta blockers such as propranolol. The structural basis of this enantioselectivity is explored here. A 1.5 Å X‐ray structure of the catalytic domain of Cel7D in complex with (R)‐propranolol showed the ligand bound at the active site in glucosyl‐binding subsites −1/+1. The catalytic residue Glu207 makes a strong charge–charge interaction with the secondary amine of (R)‐propranolol; this is supported by a second interaction of the amine with the nearby Asp209. The aromatic naphthyl group stacks onto the indole ring of Trp373 (normally the glucosyl‐binding platform of subsite +1). Other factors also contribute to good complementarity between the ligand and the substrate‐binding cleft of the enzyme. Comparison with the previous structure of a related cellulase, Cel7A from Trichoderma reesei, in complex with (S)‐propranolol strongly suggests that these enzymes will bind the (S)‐enantiomer in a very similar manner, distinct from their mode of binding to (R)‐propranolol. Tighter binding of both enzymes to the (S)‐enantiomer is largely explained by two additional hydrogen‐bonding interactions with its hydroxyl group. The distinct preference for the (R)‐enantiomer is probably a consequence of structural differences near the naphthyl group of the ligand.  相似文献   

2.
    
Xylanase IV (XYN IV) is a new recently characterized xylanase from Trichoderma reesei. It is able to degrade several different xylans, mainly producing xylose. XYN IV has been crystallized by the hanging‐drop vapour‐diffusion method, using PEG 6000 as a precipitant. The crystals belong to the orthorhombic space group P212121, with unit‐cell parameters a = 86.3, b = 137.5, c = 196.1 Å, α = β = γ = 90°. Assuming a molecular weight of 50.3 kDa, the VM values indicate there to be four XYN IV monomers in an asymmetric unit and the solvent content of the crystals to be 57%. Based on dynamic light‐scattering measurements, XYN IV is a dimer in solution. A native data set to 2.8 Å resolution has been collected at a home laboratory and a data set to 2.2 Å resolution has been collected using synchrotron radiation.  相似文献   

3.
A low molecular weight protein, named fibril-forming protein (FFP), was isolated from the culture supernatant of Avicel-grown Trichoderma reesei. The protein was purified to homogeneity and it exhibited a molecular weight of 11,400Da. Low amounts of this protein caused apparently non-hydrolytic disruption of filter paper, releasing fibrils without any detectable release of reducing sugars. It displayed no hydrolytic activity on carboxymethylcellulose (CMC), p-nitrophenyl--d-glucoside (pNPG) or 4-methylumbelliferyl cellobioside. The pH optimum of the protein was between 4 and 5. The temperature optimum was 40°C and the computed activation energy (Ea) for the filter paper disruption process was 4.18kcal/mol, suggesting disruption of non-covalent bonds. It had no immunological cross reactivity with reported cellulase components of T. reesei.  相似文献   

4.
比较了自产纤维素酶和商品纤维素酶的水解效果,并采用超滤、层析、SDS-PAGE相结合的方法分析2种纤维素酶蛋白组分的差异。里氏木霉以纸浆为C源合成的自产纤维素酶的水解得率高于商品纤维素酶,自产纤维素酶水解48h的得率为66.24%,商品纤维素酶的得率为52.19%。自产纤维素酶中存在着Cel6A酶组分和XYNⅡ酶组分,而商品纤维素酶中没有检测到这2种酶组分。自产纤维素酶和商品纤维素酶的Cel1A酶组分和Cel7A酶组分间存在着分布和含量上的差异。自产纤维素酶在相对分子质量(2.5~3.5)×104范围内存在着几条蛋白条带,而商品纤维素酶则是在相对分子质量3.5×104附近存在着几条蛋白条带。  相似文献   

5.
纤维素酶的分子改造是其催化性能改进及催化效率提升的重要手段。近年来,组学技术与结构测定技术的迅速发展,人们已建立了包括糖苷水解酶(Glycoside hydrolase,GH)在内的碳水化合物活性酶组分数据库。通过对同一蛋白家族进行序列比对、分子进化分析与祖先基因重构,以结构模建分析为指导的纤维素酶分子改造,可以明显缩小序列或结构的搜索空间,加快酶分子改造的速度,增大理性设计成功的概率;同时针对催化中心活性架构的分析可以进一步阐明纤维素酶的催化机理与酶分子持续性降解机制。文中主要对纤维素酶家族及其催化结构域的分子改造取得的最新进展作了综述。在后基因组时代基于蛋白质家族中的海量数据分析,以其保守结构信息为指导的理性设计,将会成为纤维素酶分子改造的重要方向,从而推动生物质转化工艺的快速发展。  相似文献   

6.
    
Xylanases catalyze the hydrolysis of plant hemicellulose xylan into oligosaccharides by cleaving the main‐chain glycosidic linkages connecting xylose subunits. To study ligand binding and to understand how the pH constrains the activity of the enzyme, variants of the Trichoderma reesei xylanase were designed to either abolish its activity (E177Q) or to change its pH optimum (N44H). An E177Q–xylohexaose complex structure was obtained at 1.15 Å resolution which represents a pseudo‐Michaelis complex and confirmed the conformational movement of the thumb region owing to ligand binding. Co‐crystallization of N44H with xylohexaose resulted in a hydrolyzed xylotriose bound in the active site. Co‐crystallization of the wild‐type enzyme with xylopentaose trapped an aglycone xylotriose and a transglycosylated glycone product. Replacing amino acids near Glu177 decreased the xylanase activity but increased the relative activity at alkaline pH. The substrate distortion in the E177Q–xylohexaose structure expands the possible conformational itinerary of this xylose ring during the enzyme‐catalyzed xylan‐hydrolysis reaction.  相似文献   

7.
研究C、N源对里氏木霉(Trichoderma reesei)生产纤维素酶的影响,采用单因素实验方法和中心复合方法对发酵培养基进行优化。单因素实验表明:黄豆饼粉、玉米芯、玉米浆对纤维素酶的影响显著。通过响应面优化,得到最优培养基C、N源的组成:黄豆饼粉32.21 g/L,玉米芯42.29 g/L,玉米浆4.45 g/L。优化条件下,摇瓶发酵7 d的比酶活达到(10.65±0.50)U/mL。  相似文献   

8.
At high cellobiose concentrations, the cellobiase activity of a Trichoderma reesei cellulase preparation does not follow Michaelis–Menten kinetics and shows substrate inhibition. Several rate equations were fitted to the initial rate-cellobiose concentration data. The best fit is obtained for a rate equation corresponding to partial substrate inhibition of cellobiase. In this case, the Km, Vmax and KI values obtained are 1.1 mM, 16 IU ml–1 and 26 mM, respectively.  相似文献   

9.
通过(NH4)2SO4分级沉淀、HiPrep 26/10 Desalting凝胶色谱脱盐、Source 15 Q阴离子交换色谱技术,里氏木霉(Rut C-30)纤维素酶主要组分得以初步分开,再经过Source 15 S阳离子交换色谱、HiPrep Sephacryl S-100 HR凝胶过滤色谱、Superdex 75 PrepGrade凝胶过滤色谱进一步分离纯化,得到2个纯化的内切葡聚糖酶组分EGⅡ、EGⅠ和一个外切葡聚糖酶组分CBHⅠ;经过SDS-PAGE电泳鉴定为电泳纯,测得相对分子质量分别为5.22×104,5.62×104和6.90×104。EGⅡ的最适反应pH是5.6,最适反应温度为65℃;EGⅠ的最适反应pH是4.4,最适反应温度为55℃;以羧甲基纤维素(CMC)为底物时,EGⅠ、EGⅡ的米氏常数(Km)分别为2.20 mg/mL、3.38 mg/mL。CBHⅠ的最适反应pH是5.8,最适反应温度为60℃,以对硝基苯基-β-D-纤维二糖苷(PNPC)为底物时,米氏常数(Km)为0.12 mg/mL。  相似文献   

10.
The use of a fed-batch cultivation of the fungus Trichoderma reesei (C30) allows cellulase [see 1,4-(1,3;1,4)-β-d-glucan 4-glucanohydrolase, EC 3.2.1.4] production to occur under optimum conditions, and results in extremely high enzyme titres and productivities. Enzyme levels of 26 U ml?1 at productivities >130 U l?1 h?1 have been achieved. These results are compared with the values obtained in two-stage continuous cultivation of the organism at optimum pH and temperature.  相似文献   

11.
以蔗渣为原料,采用碱和微波辐射联合处理后用于里氏木霉纤维素酶的液态发酵。采用单因素试验与正交试验确定了最佳的处理条件为:0.30 mol/L的NaOH溶液浸泡,微波功率160 W,处理5 min。在此条件下得到的单位能耗的酶活净增值最高。后续发酵结束后,酶活较未经处理的蔗渣发酵后所得酶活有显著提高。其中,β-葡萄糖苷酶活、滤纸酶(FPase)活、羧甲基纤维素酶(CMCase)活分别提高了81.3%,88.2%,154.5%。  相似文献   

12.
目的:建立红色荧光蛋白在里氏木霉中的表达方法,为深入研究里氏木霉中纤维素酶的合成机理打下基础。方法:采用PCR方法分离了里氏木霉纤维二糖水解酶Ⅰ(CBHⅠ)的启动子(Pcbh1)和终止序列(Tcbh1),将这两个片段与红色荧光蛋白(DsRed)的基因连接,得到Pcbh1-DsRed-Tcbh1表达盒。用此表达盒和质粒pAN7-1对里氏木霉QM9414的原生质体进行共转化,并用含100μg/ml潮霉素B的选择性平板进行筛选。结果:经筛选得到20个抗性转化子,在乳糖的诱导下有5个转化子可以表达红色荧光蛋白。对插入片段进行了扩增和序列测定,结果表明DsRed通过同源重组整合到了转化子的基因组DNA上,并处于cbh1启动子的下游。结论:通过cbh1启动子可以实现红色荧光蛋白在里氏木霉细胞内的稳定表达。  相似文献   

13.
刘刚  李云  张燕 《生物技术》2006,16(6):11-14
目的:建立红色荧光蛋白在里氏木霉中的表达方法,为深入研究里氏木霉中纤维素酶的合成机理打下基础。方法:采用PCR方法分离了里氏木霉纤维二糖水解酶Ⅰ(CBHI)的启动子(Pcbh1)和终止序列(Tcbh1),将这两个片段与红色荧光蛋白(DsRed)的基因连接,得到Pcbh1-DsRed-Tcbh1表达盒。用此表达盒和质粒pAN7—1对里氏木霉QM9414的原生质体进行共转化,并用含100μg/ml潮霉素B的选择性平板进行筛选。结果:经筛选得到20个抗性转化子,在乳糖的诱导下有5个转化子可以表达红色荧光蛋白。对插入片段进行了扩增和序列测定,结果表明DsRed通过同源重组整合到了转化子的基因组DNA上,并处于cbh1启动子的下游。结论:通过cbh1启动子可以实现红色荧光蛋白在里氏木霉细胞内的稳定表达。  相似文献   

14.
A condensation reaction between N-acetyllactosamine and glycerol was directly catalyzed by using a commercially available cellulase preparation from Trichoderma reesei. 1-O-β-N-Acetyllactosaminyl-(R, S)-glycerols (1) were readily synthesized in a 5% yield based on the N-acetyllactosamine added and conveniently isolated by two-step column chromatographies. The use of a partially purified enzyme increased 2.3-fold the yield of 1, compared to that of the crude enzyme containing β-D-galactosidase activity. When various alkanols (n:2-4) were used in the condensation reaction, the corresponding alkyl β-N-acetyllactosaminides were obtained in yields of 0.3-1.1% of the desired compounds.  相似文献   

15.
    
Xylan is the most common hemicellulose in plant cell walls, though the structure of xylan polymers differs between plant species. Here, to gain a better understanding of fungal xylan degradation systems, which can enhance enzymatic saccharification of plant cell walls in industrial processes, we conducted a comparative study of two glycoside hydrolase family 3 (GH3) β-xylosidases (Bxls), one from the basidiomycete Phanerochaete chrysosporium (PcBxl3), and the other from the ascomycete Trichoderma reesei (TrXyl3A). A comparison of the crystal structures of the two enzymes, both with saccharide bound at the catalytic center, provided insight into the basis of substrate binding at each subsite. PcBxl3 has a substrate-binding pocket at subsite -1, while TrXyl3A has an extra loop that contains additional binding subsites. Furthermore, kinetic experiments revealed that PcBxl3 degraded xylooligosaccharides faster than TrXyl3A, while the KM values of TrXyl3A were lower than those of PcBxl3. The relationship between substrate specificity and degree of polymerization of substrates suggested that PcBxl3 preferentially degrades xylobiose (X2), while TrXyl3A degrades longer xylooligosaccharides. Moreover, docking simulation supported the existence of extended positive subsites of TrXyl3A in the extra loop located at the N-terminus of the protein. Finally, phylogenetic analysis suggests that wood-decaying basidiomycetes use Bxls such as PcBxl3 that act efficiently on xylan structures from woody plants, whereas molds use instead Bxls that efficiently degrade xylan from grass. Our results provide added insights into fungal efficient xylan degradation systems.  相似文献   

16.
里氏木霉是生产纤维素酶的重要菌株,在其浸没式发酵过程中,氧传递是重要影响因素。为了减轻溶氧的限制,本研究借助根癌农杆菌将透明颤菌血红蛋白基因vgb引入里氏木霉。qPCR结果表明,pki及gpd启动子均可以有效启动vgb在里氏木霉中的表达。进一步实验结果表明,在摇瓶培养中,供氧充足情况下野生菌和转化株的生长无明显差异,但是在静止培养条件下,氧气供应受限,转化菌株的干重是野生菌的17.8~25.5倍。  相似文献   

17.
在里氏木霉中建立了一个快速的双基因位点同步同源重组新方法,较好解决了里氏木霉基因逐个敲除周期长等问题。研究以里氏木霉自身甘露聚糖酶基因(man5A)为重组表达的报告基因,通过一步转化,将该基因定点整合入纤维二糖水解酶Ⅰ(cbh1)基因位点,同时缺失主要的两个纤维素酶基因(cbh1、cbh2),得到重组工程菌Man12。将重组工程菌Man12与出发菌株Tu6Δku70进行摇瓶发酵,结果显示,重组菌株的甘露聚糖酶产量比出发菌株提高10倍,而纤维素酶产量降低了60%,胞外总蛋白分泌水平降低了40%。Real-time PCR检测甘露聚糖酶基因(man5A)的转录水平,发现重组菌株较出发菌株提高了25倍。在里氏木霉中首次报道了通过一步转化实现两个基因同步定点整合的方法,对利用基因工程手段构建高效表达重组蛋白的里氏木霉工程菌株具有一定的指导意义。  相似文献   

18.
Kinetics of the acyl transfer catalyzed by Xanthomonas α-amino acid ester hydrolase was studied. The enzyme hydrolyzed d-α-phenylglycine methyl ester (d-PG-OMe) to give equimolar amounts of d-α-phenylglycine and methanol. With d-PG-OMe as an acyl donor and 7-amino-3-deacetoxy-cephalosporanic acid (7-ADCA) as an acyl acceptor, the enzyme transferred the acyl group from d-PG-OMe to 7-ADCA in competition with water. The addition of amine nucleophiles (7-ADCA and 6-aminopenicillanic acid) decreased the molecular activity (ko) of the enzyme-catalyzed hydrolysis of d-PG-OMe, whereas it did not alter the Michaelis constant (KM), and plots of l/ko against the initial concentration of a nucleophile (no) gave a straight line. These results support the assumptions that the overall process for hydrolysis and acyl transfer proceeds through a common acyl-enzyme intermediate, that the acylation step of the enzyme is rate-limiting, and that the transfer competes with the hydrolysis of the acyl donor.  相似文献   

19.
以里氏木霉及米根霉单菌固态发酵为对象,考察不同混合发酵形式对里氏木霉与米根霉混合固态发酵产纤维素酶的影响。结果表明:同时接种里氏木霉与米根霉,试验考察的两菌种接种量比1∶1(以孢子个数计)及5∶1条件下,两菌未产生明显协同产酶作用。米根霉延时(24 h)接种且菌种量比5∶1以及米根霉延时(48 h)接种且菌种量比1∶1,2种发酵形式产酶情况类似,滤纸酶活(FPA)及羧甲基纤维素酶(CMCase)酶活相对米根霉单菌发酵有所提高,而β-葡萄糖苷酶(β-GA)酶活相对里氏木霉单菌固态发酵结束时分别增加4.66及4.40倍,可以发现两菌产生一定协同作用。在米根霉延时(48 h)接种且菌种量比5∶1的发酵形式下,FPA及CMCase在发酵第7天酶活分别达到44.04 IU/g、627.14 U/g(以1 g干曲计),分别是里氏木霉固态单菌发酵产酶达到稳定期时酶活的1.36和1.63倍,两菌产生了有效的协同作用。  相似文献   

20.
    
Cellooligosaccharides were computationally docked using AutoDock into the active sites of the glycoside hydrolase Family 6 enzymes Hypocrea jecorina (formerly Trichoderma reesei) cellobiohydrolase and Thermobifida fusca endoglucanase. Subsite -2 exerts the greatest intermolecular energy in binding beta-glucosyl residues, with energies progressively decreasing to either side. Cumulative forces imparting processivity exerted by these two enzymes are significantly less than by the equivalent glycoside hydrolase Family 7 enzymes studied previously. Putative subsites -4, -3, +3, and +4 exist in H. jecorina cellobiohydrolase, along with putative subsites -4, -3, and +3 in T. fusca endoglucanase, but they are less important than subsites -2, -1, +1, and +2. In general, binding adds 3-7 kcal/mol to ligand intramolecular energies because of twisting of scissile glycosidic bonds. Distortion of beta-glucosyl residues to the (2)S(O) conformation by binding in subsite -1 adds approximately 7 kcal/mol to substrate intramolecular energies.  相似文献   

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