World culture collections ofRhizobium

Summary Reliable and efficientRhizobium germplasm banks are essential for the development of research and for practical application. The second edition of the World Catalogue ofRhizobium Collections lists 64 institutions in 38 countries holding some 3000 effective, tested strains. MIRCENs Culture Collections are playing an important role in this way and in the dissemination of valuable strains for legume inoculation. Constraints for development are: adequate facilities and equipment, trained personnel, co-ordination of effort. Recommendations are: preparation of an inventory on technical aspects, new directives for training and for next edition of the Catalogue, establishment of specialized germplasm banks.

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Resumen Los bancos de germoplasma deRhizobium son esenciales tanto para el desarrollo de la investigación como para el de las aplicaciones prácticas. La segunda edición del catálogo mundial de las colecciones deRhizobium cuenta con 64 instituciones repartidas en 38 países con un total de más de 3000 cepas de probada eficacia. Las colecciones de cultivos de los MIRCEN tienen un papel importante tanto en su valor intrínseco como en la distribución de cepas eficaces para la inoculación de leguminosas. Los principales problemas con los que se enfrenta su desarrollo son: facilidades adecuadas y equipamientos; personal cualificado y coordinación de esfuerzos. Las recomendaciones son: preparación de inventarios sobre aspectos técnicos; nuevas directrices para la formación de personal y para la edición de catálogos; establecimiento de bancos de germoplasma especializados.

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Résumé Des collections deRhizobium fiables et efficaces sont essentielles à la fois pour la recherche et pour les applications agricoles. La deuxième édition du catalogue mondial des collections deRhizobium comporte 64 institutions, situées dans 38 pays, et environ 3.000 souches testées. Les collections de cultures des MIRCEn jouent un rôle important sur le plan scientifique et en ce qui concerne la distribution de souches utilisées pour l'inoculation des légumineuses. Leur développement est soumis à des difficultés concernant les installations et l'équipement, le personnel qualifié, et la coordination des efforts. Il est recommandé de faire l'inventaire des aspects techniques et de formuler de nouvelles directives pour la formation technique, pour la prépartion d'une nouvelle édition du catalogue, et pour l'établissement d'une banque de gènes spécialisée.

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Invited paper presented at the VII International Conference on the Global Impacts of Applied Microbiology, Helsinki, 12–16.8.1985. Session 2     

A survey of Polytomella (Chlorophyceae,Chlorophyta) strains in public culture collections

Polytomella is a genus of colorless green algae in the Reinhardtinia clade of the Chlamydomonadales, which has proven useful for a broad range of studies particularly those exploring the evolutionary loss of photosynthesis and mitochondrial genomics/biochemistry. Although 13 Polytomella strain accessions are currently available from public culture collections, the taxonomic status and redundancy of many of these strains is not clear because of possible mix‐ups, deficient historical records, and incomplete molecular data. This study therefore considers previously available and/or new cox1 and mitochondrial DNA telomere sequences from all 13 Polytomella strain accessions. Among four of these, namely P. parva SAG 63‐3, P. piriformis SAG 63‐10, P. capuana SAG 63‐5, and P. magna SAG 63‐9, cox1 and mitochondrial telomere regions are both highly divergent between strains. All of the remaining nine Polytomella strain accessions have cox1 sequences that are identical to that of P. parva SAG 63‐3 and although five of these have a mitochondrial telomere haplotype that is identical to that of P. parva SAG 63‐3, the remaining four have one of three different haplotypes. Among the 10 strains with identical cox1 sequences, we suggest that three of the telomere haplotypes are associated with distinct geographical isolates of Polytomella and the fourth evolved from one of these isolates during 50 years of active culture.     

Yeast culture collections of the world: meeting the needs of industrial researchers

The importance of selecting optimal yeast strains for research or industrial applications is often underestimated. For example, utilizing a strain background that already provides the desired stress tolerance or nutrient utilization profile can eliminate costly strain optimization. Yeast culture collections can provide not only the yeast strains but also data and curator expertise to help narrow the search for the optimal strain. While some collections are known for a broad range of cultures and services, other "boutique" collections can provide a broader selection of strains of certain categories, a surprising amount of characterization data, and assistance in selecting strains. This article provides information on dozens of yeast collections of the world, profiles of selected yeast culture collections, and the services that they provide: e.g., strain preservation for patent or safe deposit purposes, species identification service, training workshops, and consulting on yeast identification and physiology. Utilization of these services can save industrial researchers valuable time and resources.     

Differences between subcultures of the Mesorhizobium loti type strain from different culture collections

Because of differences in the reported 16S rRNA gene sequence of the Mesorhizobium loti type strain available from different culture collections, we collected different subcultures of this strain and compared them by 16S rDNA sequencing, SDS-PAGE of whole-cell protein extracts and RAPD-PCR. Our results indicate that the 16S rDNA sequence differences can be explained by the presence of two different organisms in one of the subcultures. In addition, even for subcultures of the type strain that had identical 16S rDNA sequences, small differences could be observed in the protein profiles and in the RAPD-PCR patterns. These latter observations indicate that maintenance procedures necessary for long-term preservation by freeze-drying can cause subcultures of the same original strain to undergo changes, effectively leading to different fingerprints even though 16S rDNA sequences remain identical.