An {alpha}-Glucan from Suspension-Cultured Rice Cells

An -glucan was isolated from 11-day-old suspension-culturedrice cells by extraction with hot Na-phosphate buffer (pH 6.8).The -glucan had []_D=+234? (C = 0.14, in water) and its averagemolecular weight was estimated to be about 1.4 ? 10⁴, basedon elution characteristics on acalibrated Sepharose CL-6B column.Upon partial acid hydrolysis, the -glucan gave mainly malto-oligosaccharides.The maximum absorption of the iodine complex of the -glucanin the presence of Na₂SO₄ was at 470 nm. The results of hydrolysisby , ß- and iso-amylases and methylation analysisindicated that the isolated -glucan is a highly branched polysaccharidewith an average chain length of 9. The exterior and interiorchain lengths of the -glucan were calculated to be 5 and 3,respectively. (Received July 23, 1986; Accepted February 7, 1987)     

Cuticle Biosynthesis in Rapidly Growing Internodes of Deepwater Rice

Submergence induces rapid elongation of deepwater rice (Oryza sativa L.) internodes. This adaptive feature allows deepwater rice to grow out of the water and to survive flooding. The growth response of submerged deepwater rice plants is, ultimately, elicited by gibberellin (GA). Little attention has been given to the synthesis and role of the cuticle during plant growth. We investigated two questions regarding the cuticle in rapidly elongating deepwater rice internodes: (a) how does cuticle formation keep pace with internodal growth, which can reach rates of up to 5 mm/h; and (b) does the cuticle contribute to tissue stress in rice internodes? Treatment with GA for 48 h caused an up to 60-fold increase in the incorporation of [14C]palmitic acid and an up to 6-fold increase in the incorporation of [14C]oleic acid into the cuticle of growing internodes. GA also caused a qualitative change in the incorporation pattern of palmitic acid into several cutin monomers, the most prominent of which was tentatively identified by thin-layer chromatography as a derivative of dihydroxyhexadecanoic acid. Rapidly growing plant organs exhibit longitudinal tissue stress: the epidermal cell layer is under tension with a tendency to contract, whereas the internal cells are under compression with a tendency to expand. As a result of tissue stress, longitudinally sliced sections of elongating internodes bend outward upon isolation from the plant. Treating rapidly growing rice internodes with cutinase reduced such outward bending, indicating that the cuticle contributes to tissue stress. Based on these results, we propose that rapidly elongating structures such as deepwater rice internodes constitute an excellent system to study cuticle formation at the biochemical and cellular level.     

The Effect of Injury on Microsomal Ascorbate Levels, {beta} -Glucan Synthesis and Urea Herbicide N-Demethylation in Etiolated Cotton Hypocotyl Tissue

A low molecular weight, microsome-bound fraction increases withtime as excised (injured) etiolated cotton hypocotyls are exposedto ambient air. This fraction can be separated from washed microsomalpreparations by dialysis or gel filtration. Data indicate thatascorbate is present in this fraction whose formation can beprevented by immediately immersing the excised tissues in abuffered solution of cyanide and metabisulphite ions. The activities of two microsomal enzyme systems are alteredas the result of the formation of this fraction. The ratio ofnon-cellulosic/cellulosic glucosyl linkages synthesized fromUDP-glucose is increased two to five times. Reciprocal plotsof the N-demethylation of a urea herbicide indicate inhibitionin a non-competitive, curvilinear manner when NADPH is the variablesubstrate. Evidence is presented to suggest that ascorbate mayfunction (directly or indirectly) as a regulatory agent in thecontrol of microsomal detoxication and biosynthesis after injuryto the plant.     

Characterization of Growth-related Osmiophilic Particles in Corn Coleoptiles and Deepwater Rice Internodes

Osmiophilic particles are secreted from the epidermal cellsinto the outer epidermal cell wall of deepwater rice internodesand corn coleoptiles that have been induced to elongate rapidlyby treatment with gibberellin or auxin, respectively. The diameterof the osmiophilic particles is 80 to 100 nm in deepwater riceand up to 300 nm in corn coleoptiles. Because these particlesare secreted to the outer epidermal wall only, they may containeither cell wall components that are specific for the outerepidermal wall or components of the cuticle that coats the outerepidermal wall. Monensin inhibited the appearance of these particles,indicating that they are derived from the Golgi apparatus. Anattempt was made to identify the contents of the osmiophilicparticles by enzyme-gold or antibody-gold labelling. Cutinase-goldaccumulated mostly in the region of the cell wall just belowthe cuticle. The osmiophilic particles became densely labelledafter incubation with proteinase K-gold, indicating that theyare, at least in part, proteinaceous. In excised tissue andultrathin sections treated with proteinase K, the number ofosmiophilic particles was reduced, while glucanase and cutinasetreatments were without effect. Antibodies against lipid transferprotein, an extensin-like protein, an arabinogalactan protein,a peroxidase, and expansin bound to the cell wall or plasmamembrane but not to the osmiophilic particles.Copyright 1994,1999 Academic Press Epidermal cell wall, gibberellin, indoleacetic acid, osmiophilic particles, Oryza sativa, Zea mays     

Particles Associated with the Outer Epidermal Wall in Internodes of Deepwater Rice

Partial submergence induces rapid internodal growth in deepwaterrice (Oryza saliva L., cv. Habiganj Aman II). The infrastructureof the cell wall/plasmalemma interface of air-grown and submergedinternodes was investigated in the region where cell elongationtakes place. In submerged internodes, electron-dense particlesof about 100 nm diameter were found. These particles were detectableonly at the thick outer wall of the outer epidermis but notat the inner walls. In air-grown control plants, no such granuleswere visible. We suggest that these particles are related tothe process of cell wall growth. The wall weight per unit lengthwas 75% lower in the submerged internode as compared to thatof the air-grown control. This indicates that secondary wallformation is suppressed during submergence of the plant Oryza saliva, deepwater rice, intemodal growth, electron-dense particles     

水稻基部伸长节间性状与茎秆机械强度的相关分析和QTL定位

分析水稻品种‘沈农265’和‘丽江新团黑谷’杂交的F2群体基部第二节间茎秆机械强度与该节间形态和茎秆解剖结构的相关性,并对基部第二节间机械强度和相关性状进行QTL定位的结果表明：机械强度与茎粗、茎壁面积、茎壁厚度、大小维管束数目、大小维管束面积、大小维管束韧皮部面积、大小维管束木质部面积呈显著或极显著的正相关,与节间长度呈极显著的负相关,而与茎秆扁平率的相关不显著。采用复合区间作图,从研究的14个目标性状中检测到18个QTL。控制基部第二节间的抗折力的QTL检测到4个,位于第4、7、9和10号染色体上,可解释遗传变异的12%～23%。在第4和第7染色体上的相同区间上还同时检测到了控制茎壁性状和维管束性状QTL,贡献率在12%～21%之间。说明这两个位点是控制基部第二节间机械强度的重要区域,也是茎壁性状、维管束性状与机械强度高度正相关的遗传学基础。     

Xyloglucan and r{beta}-D-Glucan in Cell Walls of Rice Seedlings

Cell walls of 4-day old rice seedlings were extracted successivelywith ammonium oxalate-oxalic acid, 4% KOH and 24% KOH. A rß-D-glucanpreparation and a xyloglucan preparation were isolated fromthe 4% KOH extract and 24% KOH extract, respectively. Methylationanalysis and enzymic degradation studies of the polysaccharidesshowed that the former was built up predominantly of repeating-oligosaccharideunits of 3-O-rß-cellobiosyl-D-glucose and 3-O-rß-cellotriosyl-D-glucosein a molar ratio of 2.6 : 1.0, and the latter was of repeating-oligosaccharideunits of -D-xylosyl-(16)-rß-D-glucosyl-(14)-[-D-xylosyl-(16)]-rß-D-glucosyl-(14)-D-glucose,-D-xylosyl-(16)-rß-D-glucosyl-(14)-D-glucose and cellobiose. ¹ Present address: Department of Botany, Iowa State University,Ames, Iowa 50011, U.S.A. (Received August 29, 1981; Accepted January 12, 1982)     

cDNA Sequences of Three Kinds of {beta}-tubulins from Rice

Complete nucleotide sequences of three kinds of rice ß-tubulincDNA clones (pTUB22, R1623 and R2242) were determined. Southernhybridization indicated that these ß-tubulins consistof one gene family. Using RFLP mapping, these three ß-tubulincDNAs were mapped to different chromosomes indicating at leastthree loci for the ß-tubulin gene. The deduced aminoacid sequences of these cDNAs showed a high similarity to otherplant ß-tubulins. The asparagine residue located atthe 100th amino acid from the Nterminus of plant ß-tubulinswas also conserved with these three ß-tubulins. Thisasparagine is thought to be responsible for the sensitivityagainst rhizoxin, the toxin of the pathogen of rice seedlingblight, Rhizopus sp. a soil-borne microorganism. Expressionof the three ß-tubulin genes was analyzed by Northernblotting and all three clones were expressed in root, the possibletarget tissue of rhizoxin. These results suggest that theseclones are candidates of ß-tubulins targeted by rhizoxin.     

{beta}-Amylase Activity as an Index for Germination Potential in Rice

Seeds of different vigour also differ in their germination ability.In rice (Oryza sativa), this difference was correlated withthe level of incorporation of ³⁵S-methionine into 25-60% ammoniumsulphate precipitable material that was rich in amylase proteins.This protein fraction, from dry seeds, contained no -amylaseactivity. In contrast, ß-amylase activity was presentin all seed stocks capable of 99% germination, although thelevel was lower in seeds that grew slowly when germinated. Inlow viability low vigour stock (i.e. extensively deterioratedseeds) ß-amylase activity was absent. Alpha-amylaseactivity in all stocks was detected only after 24 h from thestart of imbibition. These results indicate that ß-amylaseactivity is reliable indicator of the germination ability ofrice seed stocks and of their vigour during germination.Copyright1995, 1999 Academic Press Rice (Oryza sativa L.,), germination, ß-amylase, -amylase, seed vigour     

Converting a {beta}-glycosidase into a {beta}-transglycosidase by directed evolution

Directed evolution was applied to the beta-glycosidase of Thermus thermophilus in order to increase its ability to synthesize oligosaccharide by transglycosylation. Wild-type enzyme was able to transfer the glycosyl residue with a yield of 50% by self-condensation and of about 8% by transglycosylation on disaccharides without nitrophenyl at their reducing end. By using a simple screening procedure, we could produce mutant enzymes possessing a high transferase activity. In one step of random mutagenesis and in vitro recombination, the hydrolysis of substrates and of transglycosylation products was considerably reduced. For certain mutants, synthesis by self-condensation of nitrophenyl glycosides became nearly quantitative, whereas synthesis by transglycosylation on maltose and on cellobiose could reach 60 and 75%, respectively. Because the most efficient mutations, F401S and N282T, were located just in front of the subsite (-1), molecular modeling techniques were used to explain their effects on the synthesis reaction; we can suggest that repositioning of the glycone in the (-1) subsite together with a better fit of the acceptor in the (+1) subsite might favor the attack of a glycosyl acceptor in the mutant at the expense of water. Thus these new transglycosidases constitute an interesting alternative for the synthesis of oligosaccharides by using stable and accessible donor substrates.     

{beta}-1,4-Glucan occurring in homogenate of Phaseolus aureus seedlings. Possible nascent stage of cellulose biosynthesis in vivo

A small amount of cytoplasmic ß-1,4-glucan, whichmight be involved in the synthesis of cellulose in the cellwall, was found in the homogenate prepared from the hypocotylsof seedlings of Phaseolus aureus. Upon hydrolysis by cellulaseof the 20,000?g pellet from the cytoplasmic fraction of segmentsincubated in a [¹⁴C]-glucose solution, [¹⁴C]-cellobiose wasproduced, with specific radioactivities 3 to 10 times greaterthan those of the cellobiose from cellulose in the cell wallat various incubation periods. The incoporation of radioactivityfrom [¹⁴C]-glucose into this cytoplasmic ß-1,4-glucanwas therefore faster than that into cellulose constituting thecell wall. Hence, it seemed that the former ß-1,4-glucancould be turned over. To examine whether the- cytoplasmic ß-1,4-glucanis carried by some subcellular components, cytoplasmic ß-1,4-glucanin the cell was fractionated by differential centrifugation,two enzyme activities being measured as the markers of subcellularcomponents. The distribution of ß-1,4-glucan was similarto that of UDPG-glucosyltransferase activity but not to thatof IDP-ase activity. The result suggests that the cytoplasmicß-1,4-glucan has some relation to plasma membranes. Coumarin, known as a specific inhibitor for the biosynthesisof cellulose in plant cells, was shown to inhibit the incorporationof radiocarbon from [¹⁴C]-glucose into cytoplasmic ß-1,4-glucanto the same extent as that into cellulose in the cell wall ofthe hypocotyls. ¹ Present address: Department of Biological Science, TohokuUniversity, Kawauchi, Sendai 980, Japan. (Received May 31, 1976; )     

Biosynthesis of Xyloglucan in Suspension-cultured Soybean Cells. Evidence that the Enzyme System of Xyloglucan Synthesis does not Contain {beta}-1,4-Glucan 4-{beta}-D-Glucosyltransferase Activity (EC 2.4.1.12)

Xyloglucan 4-ß-D-glucosyltransferase, an enzyme responsiblefor the formation of the xyloglucan backbone, in a particulatepreparation of soybean cells has been compared with ß-1,4-glucan4-ß-D-glucosyltransferase of the same origin. Thefollowing observations indicate that the enzyme system of xyloglucansynthesis does not contain ß-1,4-glucan 4-ß-D-glucosyltransferaseactivity, although both enzymes transfer the glucosyl residuefrom UDP-glucose to form the ß-1,4-glucosidic linkage:1. The incorporation of [¹⁴C]glucose into xyloglucan dependedon the presence of UDP-xylose in the incubation mixture. 2.No measurable amount of radioactivity was incorporated fromUDP-[¹⁴C]xylose into the cello-oligosaccharides, although theincorporation of [¹⁴C]xylose into xyloglucan depended on thepresence of UDP-glucose in the incubation mixture (Hayashi andMatsuda 1981b). 3. The activity of xyloglucan 4-ß-D-glucosyltransferasewas stimulated more strongly by Mn²⁺ than by Mg²⁺, whereas Mg²⁺was the most active stimulator for the activity of ß-1,4-glucan4-ß-D-glucosyltransferase. 4. An addition of GDP-glucose(100 µM) to the incubation mixture inhibited the activityof xyloglucan 4-ß-D-glucosyltransferase by 17%, whereasthe activity of ß-1,4-glucan 4-ß-D-glucosyltransferasewas inhibited 56% under the same conditions. 5. Irpex exo-cellulasedid not hydrolyze the xyloglucan synthesized in vitro. 6. Theß-1,4-glucan synthesized in vitro was not a branchedxyloglucan because it gave no 2,3-di-O-methyl glucose derivativeon methylation analysis. 7. Pulse-chase experiments indicatedthat the ß-1,4-glucan was not transformed into thexyloglucan. The subcellular distribution of the xyloglucan synthase, however,was similar to that of the ß-1,4-glucan synthase (Golgi-located1,4-ß-D-glucan 4-ß-D-glucosyltransferase).Thus, it appears that the latter enzyme is located at a siteclose to xyloglucan synthase and is set aside for the assemblyof these polysaccharides into the plant cell surface. (Received May 21, 1981; Accepted October 13, 1981)     

The Biosynthesis of {beta}-Pyrazol-l-ylalanine

ß-Pyrazol-I-ylalanine, an isomer of histidine, occursin large amounts in several cucurbitaceous species. Enzymicsynthesis of the new amino-acid is shown to occur by the condensationof pyrazole and serine in an analogous manner to that in whichtryptophan is synthesized from indole and serine. The propertiesand distribution of the new enzyme, called ß-pyrazol-I-ylalaninesynthetase, have been studied using crude extracts of cucumberseedlings. The enzyme has also been demonstrated in extractsof other cucurbit seedlings. A chemical synthesis of ß-pyrazol-I-ylalanine fromserine and pyrazole adapted from the enzymic pathway has beenused to demonstrate indirectly the presence of pyrazole in cucumberand melon seeds.     

Incorporation of r{beta}-hydroxy-r{beta}-methylglutaric acid into carotenoids and other ether soluble compounds in maize seedlings

3-¹⁴C-rß-hydroxy-rß-methylglutaric acid(HMG) was effectively incorporated into isoprenoids by excisedetiolatcd shoots as well as by the cell-free extracts of maize.The rate of incorporation indicated that HMG was not degradedto acetate or acetoacetate before entering the isoprenoid pathway.HMG and HMG-CoA were equally incorporated by the soluble extractinto carotenoids indicating that, in addition to HMG-CoA reductase(EC.1.1.1.34), HMG activating enzyme was also present in theplant. The soluble system (20,000 x g fraction) showed a pHoptimum of 7. Endogenous metabolites such as mevalonic acid(MVA) in the reaction mixture decreased the incorporation ofHMG into isoprenoids. (Received September 21, 1971; )     

Shortened {beta}-cell lifespan leads to {beta}-cell deficit in a rodent model of type 2 diabetes

Since the fundamental defect in both type 1 and type 2 diabetes is β-cell failure, there is increasing interest in the capacity, if any, for β-cell regeneration. Insights into typical β-cell age and lifespan during normal development and how these are influenced in diabetes is desirable to realistically establish the prospects for β-cell regeneration as means to reverse the deficit in β-cell mass in diabetes. We assessed the mean β-cell age and lifespan by the classical McKendrick-von Foester equation that describes the age-based heterogeneity of β-cells in terms of the time-varying β-cell formation and loss estimated by a β-cell turnover model. This modeling approach was applied to evaluate β-cell lifespan in a rodent model of type 2 diabetes in comparison with nondiabetic controls. When rats were 10 mo old, mean β-cell lifespan was 1 mo vs. 6 mo in rats with type 2 diabetes vs. controls. A shortened β-cell lifespan in a rat model of type 2 diabetes results in a decrease in mean β-cell age and thus contributes to decreased β-cell mass.     

Sequence determinants of enhanced amyloidogenicity of Alzheimer A{beta}42 peptide relative to A{beta}40

Aggregation of proteins into insoluble deposits is associated with a variety of human diseases. In Alzheimer disease, the aggregation of amyloid beta (Abeta) peptides is believed to play a key role in pathogenesis. Although the 40-mer (Abeta40) is produced in vivo at higher levels than the 42-mer (Abeta42), senile plaque in diseased brains is composed primarily of Abeta42. Likewise, in vitro, Abeta42 forms fibrils more rapidly than Abeta40. The enhanced amyloidogenicity of Abeta42 could be due simply to its greater length. Alternatively, specific properties of residues Ile(41) and Ala(42) might favor aggregation. To distinguish between these two possibilities, we constructed a library of sequences in which residues 41 and 42 were randomized. The aggregation behavior of the resulting sequences was assessed using a high throughput screen, based on the finding that fusions of Abeta42 to green fluorescence protein (GFP) prevent the folding and fluorescence of GFP, whereas mutations in Abeta42 that disrupt aggregation produce green fluorescent fusions. Correlations between the sequences of Abeta42 mutants and the fluorescence of Abeta42-GFP fusions in vivo were confirmed in vitro through biophysical studies of synthetic 42-residue peptides. The data reveal a strong correlation between aggregation propensity and the hydrophobicity and beta-sheet propensities of residues at positions 41 and 42. Moreover, several mutants containing hydrophilic residues and/or beta-sheet breakers at positions 41 and/or 42 were less prone to aggregate than Abeta40 wherein these two residues are deleted entirely. Thus, properties of the side chains at positions 41 and 42, rather than length per se, cause Abeta42 to aggregate more readily than Abeta40.     

Synergistic Ca2+ responses by G{alpha}i- and G{alpha}q-coupled G-protein-coupled receptors require a single PLC{beta} isoform that is sensitive to both G{beta}{gamma} and G{alpha}q

Cross-talk between Gα(i)- and Gα(q)-linked G-protein-coupled receptors yields synergistic Ca(2+) responses in a variety of cell types. Prior studies have shown that synergistic Ca(2+) responses from macrophage G-protein-coupled receptors are primarily dependent on phospholipase Cβ3 (PLCβ3), with a possible contribution of PLCβ2, whereas signaling through PLCβ4 interferes with synergy. We here show that synergy can be induced by the combination of Gβγ and Gα(q) activation of a single PLCβ isoform. Synergy was absent in macrophages lacking both PLCβ2 and PLCβ3, but it was fully reconstituted following transduction with PLCβ3 alone. Mechanisms of PLCβ-mediated synergy were further explored in NIH-3T3 cells, which express little if any PLCβ2. RNAi-mediated knockdown of endogenous PLCβs demonstrated that synergy in these cells was dependent on PLCβ3, but PLCβ1 and PLCβ4 did not contribute, and overexpression of either isoform inhibited Ca(2+) synergy. When synergy was blocked by RNAi of endogenous PLCβ3, it could be reconstituted by expression of either human PLCβ3 or mouse PLCβ2. In contrast, it could not be reconstituted by human PLCβ3 with a mutation of the Y box, which disrupted activation by Gβγ, and it was only partially restored by human PLCβ3 with a mutation of the C terminus, which partly disrupted activation by Gα(q). Thus, both Gβγ and Gα(q) contribute to activation of PLCβ3 in cells for Ca(2+) synergy. We conclude that Ca(2+) synergy between Gα(i)-coupled and Gα(q)-coupled receptors requires the direct action of both Gβγ and Gα(q) on PLCβ and is mediated primarily by PLCβ3, although PLCβ2 is also competent.     

Activation-dependent conformational changes in {beta}-arrestin 2

Beta-arrestins are multifunctional adaptor proteins, which mediate desensitization, endocytosis, and alternate signaling pathways of seven membrane-spanning receptors (7MSRs). Crystal structures of the basal inactive state of visual arrestin (arrestin 1) and beta-arrestin 1 (arrestin 2) have been resolved. However, little is known about the conformational changes that occur in beta-arrestins upon binding to the activated phosphorylated receptor. Here we characterize the conformational changes in beta-arrestin 2 (arrestin 3) by comparing the limited tryptic proteolysis patterns and matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) profiles of beta-arrestin 2 in the presence of a phosphopeptide (V(2)R-pp) derived from the C terminus of the vasopressin type II receptor (V(2)R) or the corresponding nonphosphopeptide (V(2)R-np). V(2)R-pp binds to beta-arrestin 2 specifically, whereas V(2)R-np does not. Activation of beta-arrestin 2 upon V(2)R-pp binding involves the release of its C terminus, as indicated by exposure of a previously inaccessible cleavage site, one of the polar core residues Arg(394), and rearrangement of its N terminus, as indicated by the shielding of a previously accessible cleavage site, residue Arg(8). Interestingly, binding of the polyanion heparin also leads to release of the C terminus of beta-arrestin 2; however, heparin and V(2)R-pp have different binding site(s) and/or induce different conformational changes in beta-arrestin 2. Release of the C terminus from the rest of beta-arrestin 2 has functional consequences in that it increases the accessibility of a clathrin binding site (previously demonstrated to lie between residues 371 and 379) thereby enhancing clathrin binding to beta-arrestin 2 by 10-fold. Thus, the V(2)R-pp can activate beta-arrestin 2 in vitro, most likely mimicking the effects of an activated phosphorylated 7MSR. These results provide the first direct evidence of conformational changes associated with the transition of beta-arrestin 2 from its basal inactive conformation to its biologically active conformation and establish a system in which receptor-beta-arrestin interactions can be modeled in vitro.     

Estimation of ^{3}J_{HN\hbox{-}H\alpha} and ^{3}J_{H\alpha\hbox{-}H\beta} coupling constants from heteronuclear TOCSY spectra

(3)J proton-proton coupling constants bear information on the intervening dihedral angles. Methods have been developed to derive this information from NMR spectra of proteins. Using series expansion of the time dependent density matrix, and exploiting the simple topology of amino acid spin-systems, formulae for estimation of (3)J(HN-Halpha) and (3)J(Halpha-Hbeta) from HSQC-TOCSY spectra are derived. The results obtained on a protein entailing both alpha-helix and beta-sheet secondary structure elements agree very well with J-coupling constants computed from the X-ray structure. The method compares well with existing methods and requires only 2D spectra which would be typically otherwise recorded for structural studies.