A Spatially Explicit Model of the Wild Hog for Ecological Risk Assessment Activities at the Department of Energy's Savannah River Site

In North America, wild hogs (Sus scrofa) are both sought after as prime game and despised due to their detrimental impacts to the environment from their digging and rooting behavior. They are also a potentially useful indicator species for environmental health for both ecological- and human-based risk assessments. An inductive approach was used to develop probabilistic resource selection models using logistic regression to quantify the likelihood of hogs being in any area of the Department of Energy's 805 km² Savannah River Site (SRS) in west-central South Carolina. These models were derived by using available SRS hog hunt data from 1993–2000 and a Geographic Information System database describing the habitat structure of the SRS. The model's significant parameters indicated that wild hogs preferred hardwoods and avoided pine and shrubby areas. Further, landscape metric analyses revealed that hogs preferred areas with large complex patch areas and low size variation. These resource selection models were then utilized to better estimate exposure of wild hogs to radionuclides and metals in a disturbed riparian ecosystem on the SRS using two different possible diets based on food availability. Contaminant exposure can be better estimated using these resource selection models than has been previously possible, because past practices did not consider home range and habitat utilization probability in heterogeneously contaminated habitats. Had these models not been used, risk calculations would assume that contaminated areas were utilized 100% of the time, thus overestimating exposure by a factor of up to 25.     

Hosts of Lutzomyia shannoni (Diptera: Psychodidae) in relation to vesicular stomatitis virus on Ossabaw Island, Georgia, U.S.A.

Abstract. Hosts of Lutzomyia shannoni Dyar, a suspected biological vector of the New Jersey serotype of vesicular stomatitis (VSNJ) virus, were determined using an indirect enzyme-linked immunosorbent assay (ELISA) of 333 blood-fed female sandflies collected from their diurnal resting shelters on Ossabaw Island, Georgia, U.S.A. Sandflies had fed primarily on white-tailed deer ( Odocoileus virginianus ) (81%) and to a lesser extent on feral swine ( Sus scrofa ) (16%), two species of host infected annually with VSNJ. Other hosts were raccoons ( Procyon lotor ) and horses ( Equus caballus ) or donkeys ( E. asinus ), with only two (<1%) mixed bloodmeals from deer/raccoon and deer/swine. A larger proportion of feedings on feral swine was detected in maritime live oak forests than in mixed hardwood forests. These findings are consistent with the hypothesis that L. shannoni is a primary vector of VSNJ virus on Ossabaw Island.     

Maturation and fecundity of a stock-enhanced population of striped bass in the Savannah River Estuary, U.S.A

The striped bass Morone saxatilis population in the Savannah River (south-eastern U.S.A.) collapsed in the 1980s, and recent eorts to restore the population have resulted in increased catch-per-unit-eort (CPUE) of striped bass in the Savannah River Estuary (SRE). The abundance of eggs and larvae, however, remain well below historic levels. The primary cause of the population decline was remedied, and environmental conditions seem suitable for striped bass spawning. Regression analysis of data derived from ultrasonic imaging of 31 striped bass resulted in a statistical model that predicted ovary volume well (r²=0.95). The enumeration of oocytes from ovarian tissue samples and the prediction of ovary volume allowed fecundity to be estimated without sacrificing the fish. Oocyte maturation in Savannah River striped bass seemed to progress normally, with oocytes developing to final stages of maturity in larger fish (>750 mm L _T). Additionally, fecundity estimates were comparable to a neighbouring striped bass population. The environmental cues needed to trigger development and release of striped bass oocytes into the SRE appeared to be present. If most of the striped bass females in the SRE are still young (<7 years), the ability to produce large numbers of eggs will be limited. As these young fish mature, egg production probably will increase and the density of striped bass eggs eventually will approach historic levels, provided suitable habitat and water quality are maintained.     

Spatial and temporal segregation of spawning habitat by catostomids in the Savannah River, Georgia and South Carolina, U.S.A.

Spawning aggregations of five species of catostomids were observed on the two mid-channel gravel bars of the Savannah River, Georgia and South Carolina, in 2004 and 2005 to assess the degree of spatial and temporal overlap in the use of this habitat and determine the habitat preferences leading to segregation. Spawning catostomids showed a considerable amount of temporal overlap in their use of these mid-channel gravel bars. The observed temporal overlap was consistent between 2004 and 2005 and corresponded to temperatures at which species were present. The distribution of catostomids was not uniform at the upstream gravel bar. Carpsuckers Carpiodes sp., spotted sucker Minytrema melanops and robust redhorse Moxostoma robustum both demonstrated some spatial overlap with notchlip redhorse Moxostoma collapsum ; however, their overall distributions were different from one another. Northern hogsucker Hypentelium nigricans was present across the gravel bars, apparently as an egg predator. Spawning catostomids segregated based on flow, depth, slope and substratum size. Whether due to limited habitat availability or changes in the timing of reproduction due to altered cues, temporal and spatial overlap occurs between spawning catostomids despite the apparent partitioning of available spawning habitat. It is unclear, however, if this overlap results in excessive mortality in the early life-history stages of these species. Results suggest spatial overlap among catostomid species was minimized due to species spawning in areas within a narrow range of conditions. Intraspecific interactions such as nest site superimposition or disturbance may be a concern.     

Piscivore Responses to Enhancement of the Channelized Kissimmee River,Florida, U.S.A.

Evaluation of the success of ecosystem restoration projects requires identification of appropriate ecological metrics. Comparison of reconstructed food webs (or subsets thereof) from restored and non‐restored habitats may be a valuable tool to evaluate restoration success because food webs help identify critical predator–prey relationships, keystone species, relative importance of direct and indirect trophic interactions, and other aspects of ecological function. We compared the diets of apex predatory fishes collected from enhanced and non‐enhanced portions of the channelized Kissimmee River, Florida, USA to determine whether food web structure responded to experimental hydrologic manipulations. Diets were reconstructed for black crappie (Pomoxis nigromaculatus), bowfin (Amia calva), chain pickerel (Esox niger), Florida gar (Lepisosteus platyrhincus), largemouth bass (Micropterus salmoides), and warmouth (Lepomis gulosus) collected from enhanced and non‐enhanced portions of the Kissimmee River. Prey eaten by apex predatory fishes in the enhanced portion of the Kissimmee River were quantitatively and qualitatively different from prey eaten in non‐enhanced portions of the river. Predators in the enhanced portion of the river had fewer empty stomachs, more prey items per individual, more prey types per individual, more fish prey per individual, greater overall richness of prey, and a multivariate suite of prey distinct from predators in non‐enhanced portions of the river. Results from hydrologic manipulations suggest that large‐scale restoration of hydrologic linkages between the main channel and floodplain habitats will positively affect food web structure and ecosystem function in the Kissimmee River.     

Establishment of Chamaecyparis thyoides on an Extremely Low-Nutrient Sandy Site on the Atlantic Coastal Plain, U.S.A.

Abstract Sustained‐release fertilizer and two kinds of mulch treatments were tested to determine their effects on survival and growth of planted Chamaecyparis thyoides (Atlantic white cedar) on a sandy extremely nutrient‐deficient site. Height, basal trunk diameter, dry weight, and concentrations of nitrogen (N), phosphorus (P), and potassium (K) were measured for each treatment. After two growing seasons, survival was very high in untreated controls (mean, 86%) and was not significantly increased by any treatment (significance was assessed at p = 0.05 throughout this work). Stem height and cross‐sectional area doubled in unamended plots during the course of the study. Fresh mulch alone caused no additional increase in growth, compared with unamended plots. Decomposed mulch caused a slight but significant increase. Sustained‐release fertilizer caused significant increases in height (threefold) and dry weight (approximately sixfold). Combined treatment with fertilizer and mulch gave significantly greater growth responses than did other treatments, increasing heights 4‐ to 5‐fold, trunk cross‐sectional areas 4‐fold, and dry weights 11‐ to 21‐fold over no‐treatment controls. Tissue concentrations of N and P correlated with growth trends, with combinations of mulch and timed‐release fertilizer providing the highest values. Though statistically different, the two mulch treatments were similar in their effects on tissue nutrient concentrations. When combined with fertilizer, undecomposed mulch stimulated increases in height and dry weight significantly more than did decomposed mulch. Thus, establishment of C. thyoides on low‐nutrient sandy soils is improved by combined soil amendment with sustained‐release nutrients and organic mulch.     

Response of river metabolism to restoration of flow in the Kissimmee River, Florida, U.S.A.

1. The single station diel oxygen curve method was used to determine the response of system metabolism to backfilling of a flood control canal and restoration of flow through the historic river channel of the Kissimmee River, a sub‐tropical, low gradient, blackwater river in central Florida, U.S.A. Gross primary productivity (GPP), community respiration (CR), the ratio of GPP/CR (P/R) and net daily metabolism (NDM) were estimated before and after canal backfilling and restoration of continuous flow through the river channel. 2. Restoration of flow through the river channel significantly increased reaeration rates and mean dissolved oxygen (DO) concentrations from <2 mg L⁻¹ before restoration of flow to 4.70 mg L⁻¹ after flow was restored. 3. Annual GPP and CR rates were 0.43 g O₂ m⁻² day⁻¹ and 1.61 g O₂ m⁻² day⁻¹ respectively, before restoration of flow. After restoration of flow, annual GPP and CR rates increased to 3.95 O₂ m⁻² day⁻¹ and 9.44 g O₂ m⁻² day⁻¹ respectively. 4. The ratio of P/R (mean of monthly values) increased from 0.29 during the prerestoration period to 0.51 after flow was restored, indicating an increase in autotrophic processes in the restored river channel. NDM values became more negative after flow was restored. 5. After flow was restored, metabolism parameters were generally similar to those reported for other blackwater river systems in the southeast U.S.A. Postrestoration DO concentrations met target values derived from free flowing, minimally impacted reference streams.     

Interim Response of Dissolved Oxygen to Reestablished Flow in the Kissimmee River,Florida, U.S.A.

Restoration of the Kissimmee River should have multiple ecological benefits including improved dissolved oxygen (DO) within the river channel. Channelization of the Kissimmee River virtually eliminated flow through the natural river channel. After channelization, chronically low DO concentrations were observed in the stagnant remnant channel. Although no DO data from before channelization exist, reference estimates of pre‐channelization conditions were derived from seven relatively unimpacted streams. Stations along the Kissimmee River were sampled for 3 years before construction of the first phase of the restoration project began and for up to 8 years after the completion of construction. After Phase I construction, DO concentrations in the area of the river channel to which flow had been restored increased significantly from 2.2 to 4.9 mg/L, which is similar to DO concentrations observed in the reference streams. Mean DO concentrations for the reference streams ranged from 4.6 to 6.7 mg/L. Comparison of reference data to data from the pre‐Phase I and post‐Phase I system suggests that channelization had a negative impact on DO and that DO concentrations in the post‐Phase I Kissimmee River channel have made a significant recovery. Long‐term data trends demonstrate that DO concentrations can be negatively impacted by high flow events and that recovery from these events is generally quick, suggesting some degree of resilience in the system.     

The influence of flow and other environmental factors on benthic invertebrates in the Sacramento River, U.S.A.

We examined how community composition of benthic invertebrates was related to current velocities and other environmental variables within the Sacramento River in California, USA. Invertebrates were collected in 1998 and 1999 from 10 sites over a gradient of 187 river kilometers. Canonical correspondence analysis revealed that current velocity was the most important variable explaining community composition. Other predicator variables that influenced community composition included periphyton biomass, altitude, and disturbance. Because of the importance of velocity in structuring benthic communities in this system, alterations of flow caused by changes in river regulation structures should be carefully considered.     

Abundance Patterns of Landbirds in Restored and Remnant Riparian Forests on the Sacramento River, California, U.S.A.

Riparian vegetation along the Sacramento River—California's largest river—has been almost entirely lost, and several wildlife species have been extirpated or have declined as a result. Large-scale restoration efforts are focusing on revegetating the land with native plants. To evaluate restoration success, we conducted surveys of landbirds on revegetated and remnant riparian plots from 1993 to 2003. Our objectives were to estimate population trends of landbirds, compare abundance patterns over time between revegetated and remnant riparian forests, and evaluate abundance in relation to restoration age. Of the 20 species examined, 11 were increasing, 1 was decreasing (Lazuli Bunting [ Passerina amoena ]), and 8 showed no trend. The negative trend for Lazuli Bunting is consistent with information on poor reproductive success and with Breeding Bird Survey results. There was no apparent guild association common to species with increasing trends. Nine species were increasing on revegetated and remnant plots, four were increasing on revegetated plots only, three were increasing on remnant plots only, the Lazuli Bunting was decreasing on both, and three species were stable on both. Although many species were increasing at a faster rate on revegetated plots, their abundance did not reach that of the remnant plots. For revegetated plots, "year since planting" was a strong predictor of abundance trends for 13 species: positive for 12, negative for 1. Our study shows that restoration activities along the Sacramento River are successfully providing habitat for a diverse community of landbirds and that results from bird monitoring provide a meaningful way to evaluate restoration success.     

The Use of Geographic Information Systems, Remote Sensing, and Suitability Modeling to Identify Conifer Restoration Sites with High Biological Potential for Anadromous Fish at the Cedar River Municipal Watershed in Western Washington, U.S.A.

We developed a methodology integrating several forms of remotely sensed data into a Geographic Information Systems (GIS) model that identifies suitable sites for riparian conifer restoration at the Cedar River Municipal Watershed in western Washington, U.S.A. The model integrates vegetative and geomorphic variables with information on the habitat preferences of anadromous fishes to identify riparian stands where conifer restoration would have the greatest biological benefit for salmon recovery. The high-resolution raster datasets used in our analysis were capable of characterizing the biophysical attributes of riparian areas at finer spatial scales than was previously possible. This model is intended to serve as a screening tool to identify candidate sites for riparian area restoration. The assessment approach described in this study can be applied not only to model salmonid habitat at the watershed scale but also to assess landscape patterns relevant to a wide range of restoration goals. This methodological framework offers several advantages over other approaches to restoration site selection and planning. First, the fine-scale spatial resolution of the GIS datasets (pixels ≤5 m) used in the model provides a more accurate representation of the habitat conditions than has been possible with coarser-scale data (pixels ≥5 m). Therefore, the accuracy of site identification is greatly improved. Second, the quantitative nature of the model exercises greater objectivity than some other landscape-scale planning approaches. This regional planning tool could be replicated in other watersheds with comparable datasets and could be applied to identify habitat restoration sites for other species or guilds of species by simply altering the model criteria to match the habitat needs of the target organisms.     

Interim Responses of Benthic and Snag‐Dwelling Macroinvertebrates to Reestablished Flow and Habitat Structure in the Kissimmee River,Florida, U.S.A.

A critical component in the effort to restore the Kissimmee River ecosystem is the reestablishment of an aquatic invertebrate community typical of free‐flowing rivers of the southeastern United States. This article evaluates early responses of benthic and snag‐dwelling macroinvertebrates to restoration of flow and habitat structure following Phase I construction (interim period) of the Kissimmee River Restoration Project. Replicate benthic and snag samples were collected from remnant river channels in Pool A (Control site), and Pool C, the site of the first phase of restoration (Impact site). Samples were collected quarterly for 2 years prior to construction (baseline) and monthly or quarterly for 3 years following Phase I construction and restoration of flow. Baseline benthic data indicate a community dominated by taxa tolerant of organic pollution and low levels of dissolved oxygen, including the dipterans Chaoborus americanus (Chaoboridae) and the Chironomus/Goeldichironomus group (Chironomidae). Baseline snag data indicate a community dominated by gathering‐collectors, shredders, and scrapers. Passive filtering‐collector invertebrates were rare. Following restoration of flow, benthic invertebrate communities are numerically dominated by lotic taxa, including bivalves and sand‐dwelling chironomids (e.g. Polypedilum spp., Cryptochironomus spp., and Tanytarsini). Snags within the Phase I area support an invertebrate community dominated by passive filtering‐collectors including Rheotanytarsus spp. (Chironomidae) and Cheumatopsyche spp. (Hydropsychidae). Results indicate that restoration of flow has resulted in ecologically significant changes to the river habitat template not observed in Pool A. Observed shifts in benthic and snag macroinvertebrate community structure support previously developed hypotheses for macroinvertebrate responses to hydrologic restoration.     

Comparative evaluation of water quality on the St. Joseph River (Michigan and Indiana,U.S.A.) by three methods of algal analysis

Samples from 28 stations along the St. Joeeph River in Michigan and Indiana were collected in the Summer and late Fall of 1972. The samples were analyzed chemically (BOD, soluble orthophosphate, total phosphate, and NH₃), physically (temperature and suspended solids) and biologically (algal units, Palmer's index, bacteria, and microalgal spectral analysis). Three methods of algal evaluation (microalgal spectral analysis, algal units, and the Palmer's index) provided especially good information indicating that nutrients and degradation were a distinct problem in the lower half of the river, not only in the Indiana portion, but also in Michigan. A pronounced water quality deterioration occurred in Michigan at Niles and at St. Joseph-Benton Harbor at the mouth of the river. Evidence of improved water quality was provided by the algal analyses after the installation of improved waste water treatment facilities. Microalgal spectral analysis was judged the best and most accurate of the methods of algal analysis in spite of its extensive terminology and necessity of determination of the algae to species.     

Spontaneous and assisted restoration of vegetation on the bottom of a former water reservoir,the Elwha River,Olympic National Park,WA, U.S.A.

Early seral vegetation was studied on a former lake bottom after the removal of the 64‐m‐tall Glines Canyon Dam on the Elwha River. In 2015, vegetation cover of all vascular plant species was determined in 63 plots located on sites that emerged in 2011–2012. The sites had been planted and/or seeded, or were permitted to revegetate spontaneously. The plots were further classified by substrate texture: coarse sediments on the valley bottom and fine ones on the valley slopes. Plots were located randomly along random transects perpendicular to the former lake shore that extended into coarse sediment terraces perched above the floodplain. Additionally, 32 plots were sampled in surrounding native forests near these transects. Data were analyzed by detrended correspondence analysis and by canonical correspondence analysis. Substrate texture, that is whether fine or coarse, appeared to explain most of the variability in vegetation. The distance to forest and successional age, that is time since the site had been drained, were also significant explanatory variables, while assisted restoration by planting and seeding appeared to be insignificant to date. Spontaneous succession on fine sediments led to a species composition approaching that of adjacent natural forests. Invasive species were much less abundant than expected. Spontaneous restoration of vegetation on fine sediments in drained lake bottoms can rapidly produce a desirable vegetation composition and structure. On coarse sediments, active restoration may be useful to accelerate the development of native vegetation communities.     

The hydrogeomorphic approach to functional assessment of riparian wetlands: evaluating impacts and mitigation on river floodplains in the U.S.A.

1. The ’hydrogeomorphic‘ approach to functional assessment of wetlands (HGM) was developed as a synthetic mechanism for compensatory mitigation of wetlands lost or damaged by human activities. The HGM approach is based on: (a) classification of wetlands by geomorphic origin and hydrographic regime (b) assessment models that associate variables as indicators of function, and (c) comparison to reference wetlands that represent the range of conditions that may be expected in a particular region. In this paper, we apply HGM to riparian wetlands of alluvial rivers. 2. In the HGM classification, riverine wetlands are characterized by formative fluvial processes that occur mainly on flood plains. The dominant water sources are overbank flooding from the channel or subsurface hyporheic flows. Examples of riverine wetlands in the U.S.A. are: bottomland hardwood forests that typify the low gradient, fine texture substratum of the south-eastern coastal plain and the alluvial flood plains that typify the high gradient, coarse texture substratum of western montane rivers. 3. Assessment (logic) models for each of fourteen alluvial wetland functions are described. Each model is a composite of two to seven wetland variables that are independently scored in relation to a reference data set developed for alluvial rivers in the western U.S.A. Scores are summarized by a ’functional capacity index‘ (FCI), which is multiplied by the area of the project site to produce a dimensionless ’functional capacity unit‘ (FCU). When HGM is properly used, compensatory mitigation is based on the FCUs lost that must be returned to the riverine landscape under statutory authority. 4. The HGM approach also provides a framework for long-term monitoring of mitigation success or failure and, if failing, a focus on topical remediation. 5. We conclude that HGM is a robust and easy method for protecting riparian wetlands, which are critically important components of alluvial river landscapes.     

Evaluating the influence of land use,drought and reach isolation on the occurrence of freshwater mussel species in the lower Flint River Basin,Georgia (U.S.A.)

1. North American freshwater mussels have been subjected to multiple stressors in recent decades that have contributed to declines in the status and distribution of many species. However, considerable uncertainty exists regarding the relative influence of these factors on observed population declines. 2. We used an occupancy modelling approach to quantify relationships between mussel species occurrence and various site‐ and catchment‐level factors, including land cover, stream size, the occurrence of drought and reach isolation due to impoundment for 21 mussel species native to the lower Flint River Basin, Georgia, U.S.A. 3. Our modelling approach accounted for potential biases associated with both incomplete detection and misidentification of species, which are frequently not accommodated as sources of bias in freshwater mussel studies. 4. Modelling results suggested that mussel species were, on average, four times less likely to be present following severe drought, but the negative effects of drought declined rapidly with increasing stream size. Similarly, mussel species were 15 times less likely to occupy small streams that were isolated from mainstem tributaries by impoundments. 5. This study provides insight into the effects of natural and anthropogenic factors on freshwater mussel species. Our findings add to a growing body of literature aimed at improving understanding of the predominant factors influencing freshwater mussel populations and fostering the development of more informed and effective conservation strategies.