里氏木霉表达异源中性内切纤维素酶蛋白以改善最佳酶活pH

为了提高里氏木霉中天然纤维素酶的最佳活性pH,本实验从特异腐质霉,灰腐质霉的变种,枯草芽孢杆菌LH中分别筛选并克隆了其含有的中性纤维素酶基因,将其置于里氏木霉cbh1启动子的启动下,在里氏木霉中进行异源表达。改造株在pH 6.0下酶活提升16%,pH 7.0下活性保留75%以上,而此时原始菌酶活残留20%。本实验所得的产中性纤维素酶里氏木霉基因改造株,由于其良好的中酸性活性表现,在食品,纺织,纸浆和造纸行业应也有良好的使用潜力。     

Improved heterologous gene expression in Trichoderma reesei by cellobiohydrolase I gene （cbh1） promoter optimization

To improve heterologous gene expression in Trichoderma reesei, a set of optimal artificial cellobiohydrolase I gene （cbhl） promoters was obtained. The region from -677 to -724 with three potential glucose repressor binding sites was deleted. Then the region from -620 to -820 of the modified cbhl promoter, including the CCAAT box and the Ace2 binding site, was repeatedly inserted into the modified cbhl promoter, obtaining promoters with copy numbers 2, 4, and 6. The results showed that the glucose repression effects were abolished and the expression level of the glucuronidase （gus） reporter gene regulated by these multi-copy promoters was markedly enhanced as the copy number increased simultaneously. The data showed the great promise of using the promoter artificial modification strategy to increase heterologous gene expression in filamentous fungi and provided a set of optional high-expression vectors for gene function investigation and strain modification.     

Novel cellulase profile of Trichoderma reesei strains constructed by cbh1 gene replacement with eg3 gene expression cassette

To construct strains of the filamentous fungus Trichoderma reesei with low cellobiohydrolases while high endoglucanase activity, the Pcbh1-eg3-Tcbh1 cassette was constructed and the coding sequence of the cellobiohydrolase I (CBHI) gene was replaced with the coding sequence of the eg3 gene by homologous recombination. Disruption of the cbhl gene was confirmed by PCR, Southern dot blot and Western hybridization analysis in two transforments denoted as L 13 and L29. The filter paper-hydrolyzing activity of strain L29 was 60% of the parent strain Rut C30, and the CMCase activity was increased by 33%. This relatively modest increase suggested that the eg3 cDNA under the control of the cbhl promoter was not efficiently transcribed as the wild type cbhl gene. However our results confirmed that homologous recombination could be used to construct strains of the filamentous fungus Trichoderma reesei with novel cellulase profile. Such strains are of interest from the basic science perspective and also have potential industrial applications.     

Antisense inhibition of xylitol dehydrogenase gene, xdh1 from Trichoderma reesei

AIMS: To inhibit xylitol dehydrogenase (XDH) in Trichoderma reesei by antisense inhibition strategy and construct novel strains capable of accumulating xylitol. METHODS AND RESULTS: The xdh1 antisense expression plasmid pGTA-xdh was constructed by inserting xdh1 DNA fragment inversely between the gpdA promoter and the trpC terminator from Aspergillus nidulans into a pUC19 plasmid backbone. Trichoderma reesei protoplasts were co-transformated with pGTA-xdh and hygromycin B resistance plasmid pAN7-1. Of 20 transformants screened from the selective medium, one transformant with the highest xylitol accumulation, designated ZY15, showed a distinct reduction (c. 52%) in XDH activity compared with the original strain Rut-C30. The results of Southern hybridization and PCR assay showed that the antisense expression cassette of xdh1 was integrated into the genome of T. reesei. The RT-PCR analysis proved that antisense RNA effectively inhibited XDH expression (c. 65%). Xylitol accumulation (2.37 mg ml(-1)) of ZY15 was five times higher than that (0.46 mg ml(-1)) of the original strain Rut-C30. CONCLUSIONS: Strain ZY15 successfully downregulated XDH production and exhibited xylitol accumulation in xylose liquid medium. SIGNIFICANCE AND IMPACT OF THE STUDY: This study contributed to the budding field of fungal genetics in two points. First, it confirmed that antisense RNA strategy could be used as a means of reducing gene expression in the filamentous fungus T. reesei. Secondly, it verified that the strategy appears most promising for creating novel filamentous fungi strains capable of accumulating intermediary metabolites.     

Identification of Major Facilitator Transporters Involved in Cellulase Production during Lactose Culture of Trichoderma reesei PC-3-7

A compound showing antimicrobial activity was isolated from an oil-macerated garlic extract by silica gel column chromatography and preparative TLC. On basis of the results of NMR and MS analyses, it was identified as Z-4,5,9-trithiadeca-1,6-diene-9-oxide (Z-10-devinylajoene; Z-10-DA). Z-10-DA exhibited a broad spectrum of antimicrobial activity against such microorganisms as gram-positive and gram-negative bacteria and yeasts. The antimicrobial activity of Z-10-DA was comparable to that of Z-ajoene, but was superior to that of E-ajoene. Z-10-DA and Z-ajoene are different in respect of substitution of the allyl group by the methyl group flanking a sulfinyl group. This result suggests that substitution by the methyl group would also be effective for the inhibition of microbial growth.     

Induction of production and secretion β(1→4) glucanase with Saccharomyces cerevesiae by replacing the MET10 gene with egl1 gene from Trichoderma reesei

Aims:  To construct novel brewer's yeast strains with the ability to degrade β-glucan and increase sulfite levels in beer brewing by genetic manipulation.
Methods and Results:  The recombinant plasmid pA15ME containing P_met10-egl1-T_met10 expression cassette was constructed. Bam HI-linearized target plasmid pA15ME was transformed into the industrial brewer's yeast strain Z0103 to replace the MET10 locus through one-step gene replacement. The recombinants Z8, Z7 and Z3 with the ability to secrete active endo-β-1,4-glucanase I into the culture medium were isolated by Congo red dyeing. The enzymatic activities of EG I of Z8, Z7 and Z3 were 3·3, 1·5, 1·3 U l⁻¹, and the hydrolysing degrees of β-glucans in wort were increased 11·9%, 8·6% and 6·9%, respectively, than that of original strain Z0103. The MET10 gene deletions were confirmed by real-time PCR, and the sulfite levels of the culture mediums inoculated with Z8, Z7 and Z3 were increased 26%, 16% and 17%, respectively, compared to that of Z0103.
Conclusions:  The novel endoglucanase-producing brewer's yeast strains with inserted endoglucanase gene and deficient MET10 gene led to reduced content of barley β-glucans, enhanced filterability and increased sulfur dioxide in fermenting wort. Thus, the cost for addition of microbial β-glucanase enzyme and sulfite preparations in normal beer brewing processes could be reduced.
Significance and Impact of the Study:  These results suggested that genetic engineering approach is a powerful tool to construct the novel recombinant brewer's yeast strains with different properties to reduce the cost of beer brewing and improve the flavour of a beer, and the strains obtained have potential application value in beer brewing.     

Effect of codon optimization on the expression of Trichoderma reesei endoglucanase 1 in Pichia pastoris

Trichoderma reesei cellulases are important biocatalysts for a wide range of industrial applications that include the paper, feed, and textile industries. T. reesei endoglucanase 1 (egl1) was successfully expressed as an active and stable catalyst in Pichia pastoris for the first time. Codon optimization was applied to egl1 of T. reesei to enhance its expression levels in P. pastoris. When compared with the originally cloned egl1 gene of T. reesei, the synthetic codon optimized egl1 gene (egl1s) was expressed at a higher level in P. pastoris. Batch fermentations of both clones with the same copy number under controlled conditions indicated that codon optimized EGI enzyme activity increased to 1.24 fold after 72 h of methanol induction. Our research indicated that P. pastoris is a suitable host for cellulase production.     

Engineering cellulase mixtures by varying the mole fraction of Thermomonospora fusca E5 and E3, Trichoderma reesei CBHI, and Caldocellum saccharolyticum beta-glucosidase

In this study, different mole fractions of pure Thermomonospora fusca E(5) and E(3), plus Trichoderma reesei CBHI were studied for reducing sugar production at 2 h, degree of synergism, and cellulose binding. In addition, the effects of introducing the Caldocellum saccharolyticum beta-glucosidase into this cellulase system were investigated. The cellulases used were purified to homogeneity. Avicel PH 102 (4% w/w solution in 0.05 sodium acetate pH 5.5 buffer) was the substrate. Reactions were run at 50 degrees C for 2 h using total cellulase concentrations of 8.3 or 12.2 muM. A bimixture of T. fusca E(3) and T. reesei CBHI was very effective in hydrolyzing microcrystalline cellulose (9.1% conversion). The addition of endoglucanase E(5) to the mixture only increased conversion to 9.8%. However, when both E(5) and beta-glucosidase were added, conversion increased to 14%. It was also observed that increasing total cellulase concentration beyond 8.3 muM did little to increase percent conversion of cellulose into glucose. The results of the binding studies indicate no competition for binding sites between the endo- and exocellulases. (c) 1993 John Wiley & Sons, Inc.     

转录因子XBP1S基因表达谱差异分析

目的 应用基因表达谱芯片技术了解XBP1S在肝细胞中可能上调或下调的基因,了解其可能的调节功能线索.方法 构建pcDNA3.1（-）-XBP1S真核表达载体,转染HepG2细胞,同时以空载体pcDNA3.1（-）处理相同细胞系作为对照.48 h后制备细胞裂解液,提取mRNA,应用基因表达谱芯片技术对差异表达mRNA进行检测和分析.结果 构建的表达载体经过限制性内切酶分析和DNA序列测定,证实准确无误,提取高质量的总mRNA并进行逆转录成为cDNA,进行基因表达谱芯片技术分析.经过差异基因表达谱的筛选,发现HepG2细胞转染XBP1S以后,有38个基因表达水平显著上调,30个基因表达水平显著下调.结论 成功构建XBP1S的真核表达载体pcDNA3.1（-）-XBP1S,运用基因表达谱芯片技术成功筛选了XBP1S转染细胞后的差异表达基因,这些差异表达基因包括细胞周期、蛋白质的翻译合成及运输、能量代谢、体内免疫调节、细胞凋亡及细胞内的信号转导等方面起重要作用及肿瘤发生相关的基因,为进一步阐明XBP1S可能存在的调控机制及XBP1S蛋白可能的生物学功能提供理论依据.     

人类新基因ANKZF1的克隆与表达研究

心脏发育是一个非常复杂的过程,受一系列基因的精确调控.研究表明,许多锌指蛋白参与心脏的形成和疾病的发生.为了鉴定新的与心脏发育有关的人类锌指基因,运用同源基因克隆法,通过PCR技术扩增获得一个新的人类基因,其cDNA全长2459bp,其编码的蛋白由342个氨基酸残基组成(相对分子质量约为7.45kD).经国际人类基因命名委员会批准被命名为ANKZF1.该基因是哺乳动物物种特有基因.利用RTP-CR技术分析表明,该基因在胚胎的心脏、胃、肾和脑组织中有特异性的表达,提示该基因可能与心脏等组织的发育有关.     

壳寡糖诱导的烟草SKP1基因表达

壳寡糖是一种高效的植物抗性诱导剂,应用mRNA差异显示技术从经过壳寡糖诱导的枯斑三生烟草叶片中分离到了编号为5、31、37和46的4个基因片段.4个基因片段与本塞姆氏烟草(Nicotiana benthamiana)SKP1基因的mRNA同源性都达到82%,据此推断这4个片段是感病烟草品种枯斑三生烟草的SKP1基因.质粒双酶切及反向Northern分析结果表明,该基因表达在壳寡糖诱导下增强.由于SKP1基因与植物的抗病毒病相关,从而在mRNA水平上验证了壳寡糖的诱导抗性效应.     

逆转录病毒载体介导的LacZ基因在NIH-3T3细胞中的稳定表达

精原干细胞(SSCs)介导的转基因技术很可能成为制作转基因动物及治疗雄性不育的一条新途径。为了研究逆转录病毒载体介导法转染体外培养SSCs的可行性,用脂质体介导法将携带LacZ基因的重组逆转录病毒载体pLNCL导入包装细胞PA317,用含G418的培养液筛选得到5株稳定转染的产毒细胞。收集这些克隆的产毒上清,过滤后进行倍比稀释,用NIH-3T3细胞通过X-gal染色测定其浓缩前病毒滴度。结果显示,PA3173培养上清中病毒的浓缩前滴度最高,达1.1×103CFU/mL。再将筛选到的稳定转染的NIH-3T3细胞培养至单层,进行X-gal染色检测β-半乳糖苷酶的表达。结果显示,大多数稳定转染的NIH-3T3细胞均为X-gal ,表明这些细胞成功表达了目的基因LacZ。本研究结果为后期工作中用该载体感染体外培养SSCs奠定了基础。     

靶向C—Raf-1基因的反义核酸抗乙型肝炎病毒活性研究

目的：通过体内外实验验证靶向c-Raf-1基因的反义核酸是否具有抑制乙型肝炎病毒（HBV）的活性。方法：设计靶向c-Raf-1基因的反义核酸,并在细胞水平进行体外抗HBV活性筛选,通过RT-PCR检测c-Raf-1基因mRNA水平的变化,通过体内药效学实验进一步验证反义核酸的抗HBV效果。结果：经体外筛选,靶向c-Raf-1基因的反义核酸Raf-3145具有相对明显的抑制HBV表面抗原（HBsAg）的作用,并可剂量依赖性地抑制c-Raf-1基因的表达;体内药效学结果显示,反义核酸Raf-3145在30 mg/kg剂量下对HBsAg的表达具有一定的抑制作用。结论：经体内外活性评价,初步确定了靶向宿主基因c-Raf-1的反义核酸具有一定的抑制HBsAg表达的活性,也进一步验证了c-Raf-1基因可以作为抗HBV药物设计的候选靶点。     

WEB2基因在酿酒酵母S期检查点通路上调控RNR3基因表达

WEB2基因参与酿酒酵母S期检查点调控机制,而RNR3基因位于该调控通路末端,DNA损伤或合成阻断时,S期检查点通路诱导RNR3过度表达。因此,通过确定WEB2在该检查点通路上是否参与调控RNR3基因的表达,将有助于进一步明确WEB2基因在检查点通路上的工作位点,了解WEB2基因如何发挥检查点调控功能。构建RNR3-LacZ基因融合质粒,用于检测酵母细胞内RNR3基因的诱导性。诱导性可以通过测定β-半乳糖苷酶的活性而得知。利用DNA损伤药物甲磺酸甲酯(MMS)及DNA合成阻断剂羟基脲(HU)处理酵母细胞,测定WEB2基因突变株和野生株细胞内RNR3基因的诱导性。结果,WEB2突变株细胞中诱导活性分别增加(8.27±0.38)倍和(9.55±0.24)倍,而野生株分别增加了(83.32±2.42)倍和(124.67±2.87)倍。反映RNR3基因在WEB2突变株中的诱导性低于野生株。同RAD53突变株相比,后者的RNR3基因的诱导性更低,仅为(2.37±0.18)倍和(2.91±0.13)倍。说明WEB2基因突变影响S期检查点通路的信号传递至RNR3基因,所以在酿酒酵母S期检查点通路上,WEB2工作在RNR3基因上游,参与调控RNR3的表达,但调控能力不如RAD53基因强。     

细胞因子对GH3细胞中人生长激素基因表达的影响

为了研究细胞因子IL 11、睫状神经营养因子 (CNTF)和转化生长因子 (TGF β)对大鼠垂体GH3 细胞中人生长激素 (hGH)的基因启动子活性的影响及其与垂体特异性转录因子Pit 1蛋白的关系 ,首先建立含hGH基因启动子 (- 4 84～ 30bp)和荧光素酶融合基因的稳定转化GH3 细胞系 ,然后用细胞因子刺激 ,检测细胞培养液和细胞裂解液中GH的含量 ,反映它们对GH分泌和合成的影响 ;检测GH3 细胞内荧光素酶的变化 ,说明细胞因子对hGH基因启动子活性的作用。将Pit 1蛋白表达质粒 (pcDNA pit 1 cDNA)单独转染或与Pit 1反义寡核苷酸 (Pit 1OND)共转染于稳定转化的GH3 细胞中 ,观察加入细胞因子后荧光素酶的变化 ,探讨细胞因子的作用与Pit 1蛋白的关系。结果表明 ,IL 11(2 0nmol/L)、CNTF(10nmol/L)能刺激大鼠垂体GH3 细胞中GH的分泌和合成 ,增强GH3 细胞中荧光素酶的表达 ,分别增加到对照组的 12 6 %、136 %。TGF β(5nmol/L)能减少GH的分泌和合成 ,抑制荧光素酶的表达到对照组的 77%。Pit 1蛋白过表达和表达被抑制对细胞因子的调节作用没有影响。这说明IL 11、CNTF和TGF β可通过调节大鼠垂体GH3 细胞中hGH基因启动子活性影响GH的合成 ,Pit 1蛋白可能不参与这些调节作用。