遗传性癫痫易感大鼠脑内NMDAR1基因表达

N-甲基-D天门冬氨酸(NMDA)受体与癫痫及癫痫易感性的形成密切相关. 以遗传性癫痫易感大鼠P77PMC为研究对象, 通过RNA印迹杂交检测,NMDA受体一型亚单位(NMDAR1)mRNA在惊厥后不同脑区表达, 结果显示: P77PMC大鼠惊厥后, 大脑皮层、海马、皮层下、下丘NMDAR1 mRNA表达呈时间依赖性增加;比较惊厥即刻与惊厥后24 h, 四个脑区NMDAR1 mRNA分别增加了111%、113%、165%和202%. 提示NMDA受体 亚单位受惊厥活动调控,并参与惊厥的发生、发展及惊厥后突触结构的重建.     

尼龙膜cDNA阵列的图像处理和表达量化

高密度的cDNA阵列是大规模基因组织表达谱研究的重要技术。目标细胞的cDNA样品用同位素标记时,尼龙膜cDNA阵列对杂交信号探测的灵敏度高、线性范围大,对低表达量的cDNA也能进行有效分析。但是同位素标记的杂交样点也存在易污染、易扩散和表达量取值误差大等问题。为此,首先按同位素辐射感光原理建立严格的样点理论模型,然后对样点进行精确定位、饱和补偿、干扰校正处理,实现了样点表达量的精确提取,显著提高了量化结果的重复性。     

癫痫大鼠大脑皮质及海马神经元NOS的变化

给大白鼠侧脑室注射马桑内酯（Ｃｏｒｉａｒｉａ Ｌａｃｔｏｎｅ, ＣＬ）（１７５×１０－ ２ｍ ｏｌ／Ｌ２μｌ）后可诱发癫痫,用ＮＡＤＰＨｄ 组织化学方法观察大脑皮质及海马ＮＯＳ阳性神经元的变化, 结果： 大脑皮质ＮＯＳ阳性神经元数目逐渐增加, 至２ｈ 达高峰, 与生理盐水组相比差异具有非常显著性意义（Ｐ＜ ００１）, 随着ＣＬ作用时间延长ＮＯＳ反应由弱变强;海马区ＮＯＳ阳性神经元２ｈ 时才出现染色明显加深。对体外培养的大脑皮质及海马神经元用ＣＬ （２５×１０－ ５ｍ ｏｌ／Ｌ） 作用１／２ｈ、１ｈ、２ｈ、４ｈ 后ＮＯＳ阳性神经元均未见明显增加。     

用cDNA阵列鉴定拟南芥油菜素内酯的应答基因

采用cDNA阵列方法, 以拟南芥油菜素内酯合成缺陷突变体det2的悬浮细胞培养系为材料, 对油菜素内酯的应答基因进行了系统鉴定. 在13000个cDNA克隆中, 初步鉴定出53个油菜素内酯的应答克隆. 对这些克隆的序列分析表明: 19个克隆为新基因, 3个为涉及细胞分裂调控的基因, 4个是与逆境反应有关的基因, 4个是参与植物细胞信号转导分子或转录因子基因, 3个是涉及RNA拼接及结构有关的基因. 还发现植物其他一些生理过程基因的表达受到了油菜素内酯的影响, 包括光反应、离子运输及一些合成酶基因等. 这些结果从基因表达水平说明, 油菜素内酯影响了植物生长发育及代谢的多个过程.     

HSV转基因表达IL-1ra抑制P77PMC大鼠的惊厥发作

利用PCR基因克隆及基因转染技术 ,构建含人IL 1ra(IL 1receptorantago nist,IL 1ra)cDNA的质粒型单纯疱疹病毒 (herpessimplexvirus ,HSV)载体 ,再由HSV 1tsK株包装成假病毒颗粒 ,然后注入P77PMC听源性惊厥易感大鼠侧脑室 ,观察LacZ基因和IL 1ra在脑内的表达情况及对P77PMC大鼠惊厥程度的影响 .结果表明 :( 1 )LacZ在脑内神经和非神经细胞可持续表达 8周以上 ;( 2 )侧脑室注射pHSV IL 1ra假病毒可明显抑制P77PMC大鼠的惊厥发作 .原位杂交和免疫荧光染色发现脑膜和脉络丛上皮细胞及某些神经细胞有IL 1ramRNA和蛋白的表达 .结果表明HSV载体可有效地将IL 1ra基因转入脑内 ,并能明显抑制P77PMC听源性惊厥易感大鼠的惊厥发作 .     

ABRA在正常成年大鼠大脑皮质和海马区的表达

目的观察ABRA(Actin binding Rho activator)在成年大鼠大脑皮质和海马中的表达。方法制备成年大鼠脑的冰冻切片,采用共聚焦免疫荧光技术和免疫荧光强度测量检测ABRA在大鼠大脑皮质和海马区的表达。结果 ABRA在神经元的胞核、胞浆、突起内可见,其中胞核着色最强。在大脑皮质,ABRA阳性的神经元胞体和突起广泛分布于皮质的分子层、外颗粒层、外锥体细胞层、内颗粒层、内锥体细胞层、多形细胞层,其免疫荧光强度分别为129.22±16.94、125.39±29.83、117.67±22.50、105.85±17.65、103.90±18.00、100.23±20.38,ABRA阳性细胞率分别为0.51±0.01、0.69±0.02、0.64±0.03、0.58±0.05、0.65±0.09、0.63±0.01。在海马,ABRA均匀分布于海马各部,阳性神经元集中于锥体细胞层,而其阳性突起弥散分布于海马分子层和多形层。海马锥体细胞层、分子层、多形层免疫荧光强度分别为141.19±35.48、53.19±10.38、43.32±9.59,ABRA阳性细胞率分别为0.62±0.04、0.27±0.07、0.25±0.03。结论 ABRA广泛表达于大鼠大脑皮质和海马各层,提示ABRA可能在大鼠这些部位的神经细胞功能活动方面起重要作用。     

cDNA RDA在类似普通2型糖尿病大鼠肾脏组织基因差异表达筛查中的应用

应用代表性差异分析 (cDNARDA)技术 ,对类似普通 2型糖尿病大鼠肾脏组织基因差异表达进行筛查 ,初步探讨类似普通 2型糖尿病大鼠肾脏损害发病的分子机制 .首先以类似普通 2型糖尿病大鼠肾脏组织作为实验组 (Tester) ,正常大鼠肾脏作为对照组或驱动组 (Driver)通过cDNARDA进行基因差异表达筛查 ;最终的差异产物亚克隆到Puc 18载体 ,测序及并进行生物信息学分析 ;半定量RT PCR对筛查到新的基因进行初步的鉴定 .结果发现 9个新ESTs ,2个新基因 .这 2个新基因分别与人及小鼠的丝氨酸蛋白酶抑制因子F ,及真核细胞转录启动因子 3亚单位 5 (EIF 3epsilon)基因有高度的相似性 (>90 % )并在类似普通 2型糖尿病大鼠肾脏组织表达上调 .推测 2个新基因分别是大鼠的丝氨酸蛋白酶抑制因子F及真核细胞转录启动因子 3亚单位 5 .两个新基因在类似普通 2型糖尿病大鼠肾脏组织表达上调 ,可能与类似普通 2型糖尿病大鼠肾脏损害相关 .同时 ,对新基因RS91进行了全长cDNA克隆     

AGRIN在老年鼠大脑皮质和海马的表达

目的观察蛋白聚糖-agrin在大鼠大脑皮质和海马的表达,探讨agrin与记忆的关系.方法用抗agrin的多克隆抗体,免疫组化方法检测成年大鼠、记忆正常老年鼠以及记忆障碍的老年鼠大脑皮质和海马中agrin的表达变化.结果 Agrin在不同动物组的表达变化明显,在成年鼠和记忆正常的老年鼠的大脑皮质和海马agrin有较弱表达,但在记忆障碍的老年鼠其表达增加明显.结论 Agrin表达可能和大鼠的记忆障碍有关.     

Wistar大鼠Pdia3cDNA的克隆及原核表达

哺乳动物的精卵融合是一个多分子参与的复杂过程,目前只鉴定出几种影响精卵融合的蛋白因子,对其分子机制还知之甚少.其中位于精子上的Pdja3具有二硫键异构酶活性,可能催化其他精卵融合相关蛋白的二硫键变化而参与精卵膜融合.克隆了Wistar大鼠的Pdia3 cDNA片段,长度为1 620 bp,其中编码区为1 518 bp.测序结果显示,编码区内有两个碱基与GenBank公布的大鼠Pdia3cDNA不同,分别为第147个密码子GAG(Glu)的第1位碱基和第410个密码子AAG(Lys)的第3位碱基,前者造成氨基酸替换,后者仅为多态性.此外,还在大肠杆菌中成功地表达并纯化了GST-Pdia3融合蛋白,为下一步研究大鼠Pdia3在体外影响精卵融合和与其它蛋白的相互作用奠定了基础.     

用cDNA表达阵谱分析小鼠鼻咽部相对特异表达基因

利用Mouse Atlas^TM cDNA expression array检测鼻咽、气管、食管、膀胱四种组织中588个已知基因的表达谱,得到11个在鼻咽上皮中表达相对较高的基因,作为鼻咽部组织相对特异基因的候选者,并用RT-PCR进一步验证.     

用限制性cDNA文库制作K562细胞基因表达谱芯片探针

以人红白血病K562细胞为材料,应用限制性显示PCR（RD-PCR）技术构建cDNA文库,该文库通过PCR引物3′端延伸两个不同碱基形成136对引物对cDNA进行限制性扩增,得到136组不同的PCR扩增产物,纯化后与载体连接并转化细菌,即为限制性cDNA文库,根据不同的分组进行克隆的鉴定和分离。并进行大量扩增制备cDNA芯片探针,该方法构建的文库因经过了限制性分组扩增,每组均含有特定的cDNA,因而大大加快了随后克隆的分离 和鉴定的速度,为基因芯片探针制备提供了一个新方法。     

人胚鼻咽组织基因表达谱

以水囊引产５、６、７、８个月人胚胎鼻咽组织总ＲＮＡ逆转录标记ｃＤＮＡ探针,与代表５８８个基因的Ａｔｌａｓ＾ＴＭｃＤＮＡ阵列进行杂交,观察了这些基因在不同发育时期内的表达差异。结果发现与细胞分裂增殖及细胞生长相关的基因明显高表达,不同胎龄存在多个表达水平不同的基因及同一基因在不同时期表达水平也不一样,如早期生长反应蛋白１（ｅａｒｌｙ ｇｒｏｗｔｈ ｒｅｓｐｏｎｓｅ ｐｒｏｔｅｉｎ１）基因ＥＧＲＰ１在     

鼻咽癌转移相关基因的比较基因组杂交和cDNA微阵列研究

为筛选在鼻咽癌转移中起重要作用的基因 ,应用比较基因组杂交 (CGH)和cDNA微阵列方法研究成瘤和转移能力不同的鼻咽癌细胞株 6 10B和 5 8F .CGH结果显示 ,2种细胞株在 5p、7q、8p、9q、11p、12q和 17p的一定区域存在差异性扩增 ,在 2q存在差异性缺失 ;cDNA微阵列显示 ,相对于非转移性 6 10B细胞株 ,高转移性 5 8F细胞表现一些基因表达的上调及下调 ,CGH和cDNA微阵列的结合是筛选转移相关基因较好方法     

Effects of Luteolin on Human Breast Cancer Using Gene Expression Array: Inferring Novel Genes

Taraxacum officinale (dandelion) is often used in traditional Chinese medicine for the treatment of cancer; however, the downstream regulatory genes and signaling pathways mediating its effects on breast cancer remain unclear. The present study aimed to explore the effects of luteolin, the main biologically active compound of T. officinale, on gene expression profiles in MDA-MB-231 and MCF-7 breast cancer cells. The results revealed that luteolin effectively inhibited the proliferation and motility of the MDA-MB-231 and MCF-7 cells. The mRNA expression profiles were determined using gene expression array analysis and analyzed using a bioinformatics approach. A total of 41 differentially expressed genes (DEGs) were found in the luteolin-treated MDA-MB-231 and MCF-7 cells. A Gene Ontology analysis revealed that the DEGs, including AP2B1, APP, GPNMB and DLST, mainly functioned as oncogenes. The human protein atlas database also found that AP2B1, APP, GPNMB and DLST were highly expressed in breast cancer and that AP2B1 (cut-off value, 75%) was significantly associated with survival rate (p = 0.044). In addition, a Kyoto Encyclopedia of Genes and Genomes pathway analysis revealed that the DEGs were involved in T-cell leukemia virus 1 infection and differentiation. On the whole, the findings of the present study provide a scientific basis that may be used to evaluate the potential benefits of luteolin in human breast cancer. Further studies are required, however, to fully elucidate the role of the related molecular pathways.     

Microarray Analysis of Gene Expression in Rat Hippocampus After Chronic Ethanol Treatment

It is thought that changes in gene expression in the brain mediate chronic ethanol-induced complex behaviors such as tolerance, dependence, and sensitization, and also relate to ethanol-induced brain toxicity. Using high-density filter-based cDNA microarrays (GeneFilters), we analyzed the expression of over 5000 genes in the dorsal hippocampus of rats treated with 12% ethanol or tap water for 15 months. Ethanol-induced changes in gene expression were particularly prominent in two groups of genes. One group consisted of oxidoreductases, including ceruloplasmin, uricase, branched-chain alpha-keto acid dehydrogenase, NADH ubiquinone oxidoreductase, P450, NAD⁺-isocitrate dehydrogenase, and cytochrome c oxidase, which may be related to ethanol-induced oxidative stress. The other group of genes included ADP-ribosylation factor, RAS related protein rab10, phosphatidylinositol 4-kinase, dynein-associated polypeptides, and dynamin-1, which seem to be involved in membrane trafficking. The results may reveal some of the pathways involved in ethanol-induced pathophysiological changes.     

LASS1基因克隆及其在大鼠脑皮层的表达与神经元衰老的相关性初步研究

长寿保障基因LAG1是从酵母中克隆的与酵母寿命相关的基因,随酵母生命衰老而表达发生变化.对大鼠中同源基因LASS1进行克隆、测序和序列分析,发现其mRNA序列不同于GenBank中的预测序列,开放阅读框包含1 053碱基对,编码蛋白由350个氨基酸组成,内含Lag1蛋白家族保守的Lag1p motif和TLC结构域.从新生、1月龄、6月龄、12月龄和24月龄大鼠脑顶叶皮质提取总RNA,用半定量RT-PCR及RNA印迹方法对LASS1在大鼠脑皮质中的表达随年龄变化情况进行分析.结果表明,出生后LASS1表达量随年龄增加而增高,至6月龄达高峰,然后随年龄增加而逐渐下降,至24月老龄鼠达最低.衰老相关β半乳糖苷酶(SA-β-gal)对鼠脑皮层染色发现,神经元阳性染色随年龄增长明显增加.大鼠LASS1基因表达在正常衰老过程中发生变化,为进一步研究该基因的作用奠定了基础.     

Partial Genome Scale Analysis of Gene Expression in Human Adipose Tissue Using DNA Array

Objective: Large scale analysis of gene expression in adipose tissue provides a basis for the identification of novel candidate genes involved in the pathophysiology of obesity. Our goal was to explore gene expression in human adipose tissue at a partial genome scale using DNA array. Research Methods and Procedures: Labeled cDNA, derived from human adipose tissue poly(A⁺) RNA, was hybridized to a DNA array containing over 18,000 human expressed sequence‐tagged (EST) clones. The results were analyzed by database searches. Results: Homology searches of the 300 EST clones with highest hybridization signals revealed that 145 contained DNA sequences identical to known genes and 79 could be linked to UniGene clusters. Of the 145 identified genes, 136 were nonredundant and subsequently characterized with respect to function and chromosomal localization by searching MEDLINE, UniGene, GeneMap, OMIM, SWISS‐PROT, the Genome Database, and the Location Data Base. The identified genes were grouped according to their putative functions; cell/organism defense (9.6%), cell division (5.1%), cell signaling/communication (19.8%), cell structure/motility (12.5%), gene/protein expression (16.9%), metabolism (16.2%), and unclassified (19.8%). Less than 50% of these genes have previously been reported to be expressed in adipose tissue. The chromosomal localization of 268 genes strongly expressed in adipose tissue showed that their relative abundance was significantly increased on chromosomes 11, 19, and 22 compared to the expected distribution of the same number of random genes. Discussion: Our study resulted in the identification of numerous genes previously not reported to be expressed in adipose tissue. These results suggest that DNA array is a powerful tool in the search for novel regulatory pathways within adipose tissue on a scale that is not possible using conventional methods.