Modelling O2 and O2 unidirectional fluxes in plants. III: Fitting of experimental data by a simple model

Photosynthetic assimilation of CO₂ in plants results in the balance between the photochemical energy developed by light in chloroplasts, and the consumption of that energy by the oxygenation processes, mainly the photorespiration in C₃ plants. The analysis of classical biological models shows the difficulties to bring to fore the oxygenation rate due to the photorespiration pathway. As for other parameters, the most important key point is the estimation of the electron transport rate (ETR or J), i.e. the flux of biochemical energy, which is shared between the reductive and oxidative cycles of carbon. The only reliable method to quantify the linear electron flux responsible for the production of reductive energy is to directly measure the O₂ evolution by ¹⁸O₂ labelling and mass spectrometry. The hypothesis that the respective rates of reductive and oxidative cycles of carbon are only determined by the kinetic parameters of Rubisco, the respective concentrations of CO₂ and O₂ at the Rubisco site and the available electron transport rate, ultimately leads to propose new expressions of biochemical model equations. The modelling of ¹⁸O₂ and ¹⁶O₂ unidirectional fluxes in plants shows that a simple model can fit the photosynthetic and photorespiration exchanges for a wide range of environmental conditions. Its originality is to express the carboxylation and the oxygenation as a function of external gas concentrations, by the definition of a plant specificity factor Sp that mimics the internal reactions of Rubisco in plants. The difference between the specificity factors of plant (Sp) and of Rubisco (Sr) is directly related to the conductance values to CO₂ transfer between the atmosphere and the Rubisco site. This clearly illustrates that the values and the variation of conductance are much more important, in higher C₃ plants, than the small variations of the Rubisco specificity factor. The simple model systematically expresses the reciprocal variations of carboxylation and oxygenation exchanges illustrated by a “mirror effect”. It explains the protective sink effect of photorespiration, e.g. during water stress. The importance of the CO₂ compensation point, in classical models, is reduced at the benefit of the crossing points Cx and Ox, concentration values where carboxylation and oxygenation are equal or where the gross O₂ uptake is half of the gross O₂ evolution. This concept is useful to illustrate the feedback effects of photorespiration in the atmosphere regulation. The constancy of Sp and of Cx for a great variation of P under several irradiance levels shows that the regulation of the conductance maintains constant the internal CO₂ and the ratio of photorespiration to photosynthesis (PR/P). The maintenance of the ratio PR/P, in conditions of which PR could be reduced and the carboxylation increased, reinforces the hypothesis of a positive role of photorespiration and its involvement in the plant-atmosphere co-evolution.     

A microassay of O2 concentration based on oxygen-induced chemiluminescence in anaerobic lipoxygenase reactions

The preparation of chemiluminescence probes for assaying O₂ concentrations in microsamples is described. This probe is based on an anerobic lipoxygenase-linoleate system continously generating reactive intermediates which in a spontaneous reaction with added O₂ yield an excited species. The resulting chemiluminescence signals are highly reproducible upon repeated sample application and unaffected by even large variations in the contents of lipoxygenase-1 and linoleic acid. The linear assay range is between 0.25 and 25 nmol of O₂. The assay system described is stable for 90±10 min. irrespective of the number of samples added, and the probe can be regenerated thereafter by adding linoleic acid.     

Mixed effects of CO2 concentration on photosynthesis of lettuce in a closed artificial ecosystem

The photosynthetic response of higher plants to CO₂ concentration in the controlled ecological life support system (CELSS) was investigated using a closed artificial ecosystem. As the representative cultivar, five batches of lettuce were cultivated in a staged mode to eliminate the influence of other biological and technical factors. Carbon dioxide was supplied by the routine respiration of researchers. A mixed effects model was established to describe the photosynthesis of lettuce crops. The fixed and random effects of parameters were estimated based on the selected data sets. The model adequacy was evaluated by the statistical analyses. The frequency histograms of the random effects were regressed using the probability density equations. The distribution of photosynthetic rate at each point of CO₂ concentration on the random effects was obtained. The predictions of the model compared favorably with the experimental measurements. The model was sufficient to describe the photosynthetic property of the lettuce crops. The method discussed in this paper could be extended to investigate the mixed effects of other environmental conditions on the photosynthesis of higher plants.     

Modelling O2 and O2 unidirectional fluxes in plants. IV: Role of conductance and laws of its regulation in C3 plants

Numerous studies focus on the measurement of conductances for CO₂ transfer in plants and especially on their regulatory effects on photosynthesis. Measurement accuracy is strongly dependent on the model used and on the knowledge of the flow of photochemical energy generated by light in chloroplasts. The only accurate and precise method to quantify the linear electron flux (responsible for the production of reductive energy) is the direct measurement of O₂ evolution, by ¹⁸O₂ labelling and mass spectrometry. The sharing of this energy between the carboxylation (P) and the oxygenation of photorespiration (PR) depends on the plant specificity factor (Sp) and on the corresponding atmospheric concentrations of CO₂ and O₂ ( André, 2013). The concept of plant specificity factor simplifies the equations of the model. It gives a new expression of the effect of the conductance (g) between atmosphere and chloroplasts. Its quantitative effect on photosynthesis is easy to understand because it intervenes in the ratio of the plant specificity factor (Sp) to the specificity of Rubisco (Sr). Using this ‘simple’ model with the data of ¹⁸O₂ experiments, the calculation of conductance variations in response to CO₂ and light was carried out.     

Developmental changes in the responses of O2 uptake and ventilation to acutely declining O2 tensions in larval krill Meganyctiphanes norvegica

The effect of exposure to acutely declining oxygen tensions on O₂ uptake (M_O2) and ventilation has been investigated in different larval stages of Northern krill Meganyctiphanes norvegica (calytopis III/early furcilia I, late furcilia I, furcilia III and V). An ability to regulate M_O2 during acutely declining P_O2 began to appear about furcilia III (critical O₂ tension or P_c=15.4±0.73 kPa) and had improved by furcilia V (P_c=12.6±0.39 kPa). Hypoxia-related hyperventilation was achieved by an increase in pleopod (but not thoracic limb) activity (P_c∼11 kPa), a sensitivity which also appeared at, or just before, furcilia V even though an earlier stage (furcilia III) had a full compliment of functional setose pleopods. While this regulatory ability appeared as the gills were beginning to form, furcilia V is still early in gill ontogeny compared with adults. Preexposure to very moderate hypoxia (60% and 70% O₂ saturation) of furcilia III and V resulted in substantial mortality, but where it did not (furcilia V, 80% O₂ saturation), there was no effect of keeping krill at this P_O2 on either M_O2 or ventilation, suggesting that the development of respiratory regulation in M. norvegica is not open to environmental influence in the same way as for other crustaceans. We suggest that ontogeny of pleopod control provides furcilia V+ with both a stronger means of propulsion, allowing the ontogeny of DVM but also with an ability to regulate M_O2 during exposure to acutely declining P_O2s. The onset of respiratory regulation (furcilia V) preceded the onset of DVM (furcilia VI+). As pleopod ontogeny is associated intimately with the ontogeny of DVM and respiratory regulation, in the Gullmarsfjord this co-occurrence is fortuitous as krill can be required during DVM to migrate into hypoxic water which they are not equipped to deal with, in physiological terms, before furcilia V.     

Gas exchange of Ginkgo biloba leaves at different CO2 concentration levels

One and a half year-old Ginkgo saplings were grown for 2 years in 7 litre pots with medium fertile soil at ambient air CO₂ concentration and at 700 μmol mol⁻¹ CO₂ in temperature and humidity-controlled cabinets standing in the field. In the middle of the 2nd season of CO₂ enrichment, CO₂ exchange and transpiration in response to CO₂ concentration was measured with a mini-cuvette system. In addition, the same measurements were conducted in the crown of one 60-year-old tree in the field. Number of leaves/tree was enhanced by elevated CO₂ and specific leaf area decreased significantly.CO₂ compensation points were reached at 75–84 μmol mol⁻¹ CO₂. Gas exchange of Ginkgo saplings reacted more intensively upon CO₂ than those of the adult Ginkgo. On an average, stomatal conductance decreased by 30% as CO₂ concentration increased from 30 to 1000 μmol mol⁻¹ CO₂. Water use efficiency of net photosynthesis was positively correlated with CO₂ concentration levels. Saturation of net photosynthesis and lowest level of stomatal conductance was reached by the leaves of Ginkgo saplings at >1000 μmol mol⁻¹ CO₂. Acclimation of leaf net CO₂ assimilation to the elevated CO₂ concentration at growth occurred after 2 years of exposure. Maximum of net CO₂ assimilation was 56% higher at ambient air CO₂ concentration than at 700 μmol mol⁻¹ CO₂.     

Synthesis and characterization of SrCu2(O2CR)3(bdmap)3 and Bi2(O2CCH3)4(bdmap)2(H2O) (R = CH3, CF3; bdmap = 1,3-bis(dimethylamino)-2-propanolato)

New mixed metal complexes SrCu₂(O₂CR)₃(bdmap)₃ (R = CF₃ (1a), CH₃ (1b)) and a new dinuclear bismuth complex Bi₂(O₂CCH₃)₄(bdmap)₂(H₂O) (2) have been synthesized. Their crystal structures have been determined by single-crystal X-ray diffraction analyses. Thermal decomposition behaviors of these complexes have been examined by TGA and X-ray powder diffraction analyses. While compound 1a decomposes to SrF₂ and CuO at about 380°C, compound 1b decomposes to the corresponding oxides above 800°C. Compound 2 decomposes cleanly to Bi₂O₃ at 330°C. The magnetism of 1a was examined by the measurement of susceptibility from 5–300 K. Theoretical fitting for the susceptibility data revealed that 1a is an antiferromagnetically coupled system with g = 2.012(7), −2J = 34.0(8) cm⁻¹. Crystal data for 1a: C₂₇H₅₁N₆O₉F₉Cu₂Sr/THF, monoclinic space group P2₁/m, A = 10.708(6), B = 15.20(1), C = 15.404(7) Å, β = 107.94(4)°, V = 2386(2) ų, Z = 2; for 1b: C₂₇H₆₀N₆O₉Cu₂Sr/THF, orthorhombic space group Pbcn, A = 19.164(9), B = 26.829(8), C = 17.240(9) Å, V = 8864(5) ų, Z = 8; for 2: C₂₂H₄₈O₁₁N₄Bi₂, monoclinic space group P2₁/c, A = 17.614(9), B = 10.741(3), C = 18.910(7) Å, β = 109.99(3)°, V = 3362(2) ų, Z = 4.     

Sensitivity of a dynamic global vegetation model to climate and atmospheric CO2

The equilibrium carbon storage capacity of the terrestrial biosphere has been investigated by running the Lund–Potsdam–Jena Dynamic Global Vegetation Model to equilibrium for a range of CO₂ concentrations and idealized climate states. Local climate is defined by the combination of an observation-based climatology and perturbation patterns derived from a 4 × CO₂ warming simulations, which are linearly scaled to global mean temperature deviations, Δ T _glob. Global carbon storage remains close to its optimum for Δ T _glob in the range of ±3°C in simulations with constant atmospheric CO₂. The magnitude of the carbon loss to the atmosphere per unit change in global average surface temperature shows a pronounced nonlinear threshold behavior. About twice as much carbon is lost per degree warming for Δ T _glob above 3°C than for present climate. Tropical, temperate, and boreal trees spread poleward with global warming. Vegetation dynamics govern the distribution of soil carbon storage and turnover in the climate space. For cold climate conditions, the global average decomposition rate of litter and soil decreases with warming, despite local increases in turnover rates. This result is not compatible with the assumption, commonly made in global box models, that soil turnover increases exponentially with global average surface temperature, over a wide temperature range.     

On the O2 flash yields of two cyanophytes

We explored O₂ flash yield in two cyanophytes, Anacystis nidulans and Agmenellum quadruplicatum. On a rate-measuring electrode, a single flash gave a contour of O₂ evolution with a peak at about 10 ms which was maximum (100) for 680 nm background light. On 625 nm illumination the peak was smaller (62) but was followed by an increased tail of O₂ attributed to enhancement of the background. After a period of darkness, repetitive flashes (5 Hz) gave a highly damped initial oscillation in individual flash yields which finally reached steady state at 94% of the yield for 680 nm illumination. When O₂ of repetitive flashes was measured as an integrated flash yield the results was distinctive and similar to that for a continuous light 1 (680 nm). An apparent inhibition of respiration which persisted into the following dark period was taken as evidence for the Kok effect. With a concentration-measuring electrode, integrated flash yield vs. flash rate showed the same nonlinear behavior as O₂ rate vs. intensity of light 1. We draw three conclusions about the two cyanophytes. (a) The plastoquinone pool is substantially reduced in darkness. (b) Because of a high ratio of reaction centers, reaction center 1 / reaction center 2, for the two photoreactions, saturating flashes behave as light 1. (c) Because repetitive flashes are light 1, they also give a Kok effect which must be guarded against in measurements designed to count reaction centers.     

O2 incorporation into a long-chain fatty acid during bacterial luminescence

The bioluminescence-dependent oxidation of a long-chain fatty aldehyde catalyzed by luciferase from Photobacterium phosphoreum has been studied in ¹⁸O₂ experiments. The results show the incorporation of one atom of molecular oxygen into the product, the corresponding fatty acid. This incorporation is not the result of exchange of ¹⁸O₂ with the aldehyde prior to oxidation to the acid, thereby indicating that the bacterial luciferase catalyzes an aldehyde monooxygenase reaction which is coupled with bioluminescence.     

Synthesis, and crystal and molecular structures of the triflato and trifluoroacetato complexes of zinc, Zn(O3SCF3)2(DME)2 and [Zn(O2CCF3)2(DME)]n

Anhydrous Zn(O₃SCF₃)₂ and Zn(O₂CCX₃)₂, X=F, Cl, Br were obtained in substantially quantitative yields from ZnO (or ZnEt₂ in the case of the bromide derivative) and a mixture of the corresponding acid and anhydride in heptane as medium. The reactions are rapid and moderately exothermic. Recrystallization of the triflate and trifluoroacetate complexes from dimethoxyethane (DME) produced single crystals of Zn(O₃SCF₃)₂(DME)₂ (1) and [Zn(O₂CCF₃)₂(DME)]_n (2) suitable for X-ray diffraction studies. In both compounds zinc is hexacoordinated with a pseudo-octahedral geometry. Compound 1 is constituted by mononuclear molecules with terminal monodentate O₃SCF₃ ligands in trans position. A polynuclear chain structure was found for 2 with zinc atoms joined alternatively by triple and single carboxylato bridges, and with bidentate terminal DME.     

Multiscale model intercomparisons of CO2 and H2O exchange rates in a maturing southeastern US pine forest

We compared four existing process‐based stand‐level models of varying complexity (physiological principles in predicting growth, photosynthesis and evapotranspiration, biogeochemical cycles, and stand to ecosystem carbon and evapotranspiration simulator) and a new nested model with 4 years of eddy‐covariance‐measured water vapor (LE) and CO₂ (Fc) fluxes at a maturing loblolly pine forest. The nested model resolves the ‘fast’ CO₂ and H₂O exchange processes using canopy turbulence theories and radiative transfer principles whereas slowly evolving processes were resolved using standard carbon allocation methods modified to improve leaf phenology. This model captured most of the intraannual variations in leaf area index (LAI), net ecosystem exchange (NEE), and LE for this stand in which maximum LAI was not at a steady state. The model comparisons suggest strong linkages between carbon production and LAI variability, especially at seasonal time scales. This linkage necessitates the use of multilayer models to reproduce the seasonal dynamics of LAI, NEE, and LE. However, our findings suggest that increasing model complexity, often justified for resolving faster processes, does not necessarily translate into improved predictive skills at all time scales. Additionally, none of the models tested here adequately captured drought effects on water and CO₂ fluxes. Furthermore, the good performance of some models in capturing flux variability on interannual time scales appears to stem from erroneous LAI dynamics and from sensitivity to droughts that injects unrealistic flux variability at longer time scales.     

Bis(O2S2 macrocycle) complexes of palladium(II)

Two isomeric dibenzo-O₂S₂ macrocycles L¹ and L² have been synthesised and their coordination chemistry towards palladium(II) has been investigated. Two-step approaches via reactions of 1:1-type complexes, [cis-Cl₂LPd] (1a: L = L¹, 1b: L = L²), with different O₂S₂ macrocycle systems (L¹ and L²) have led to the isolation of the following bis(O₂S₂ macrocycle) palladium(II) complexes in the solid state: [Pd(L¹)₂](ClO₄)₂ (2a) and a mixture of [Pd(L¹)₂](ClO₄)₂ (2a) + [Pd(L²)₂](ClO₄)₂ (2b).     

Correction of infra-red gas analyser readings for changes in reference tube CO2 concentration

Abstract The theoretical basis for correcting infra-red gas analyser readings for changes in reference tube CO₂ concentration is developed, but in practice the corrections made are empirical. Analyser gain (G_A) is related to reference tube concentration (A) in hyperbolic manner. The constants in the equation are determined by plotting 1/G_A against A. Calibration and operating procedure for a particular type of analyser are described and a numerical example given.