Intradiurnal variation of allergenic pollen in the city of Porto (Portugal)

This study reports the hourly distribution of the allergenic airborne pollen types more abundant in the atmosphere of Porto (Portugal) during the studied period. This knowledge will allow an adequacy daily routine for allergic patients during the hours of higher airborne concentrations. The airborne pollen concentration was continuously performed from January 2003 to December 2007 in the city of Porto using a Hirst-type volumetric sampler. Urticaceae, Cupressaceae, Acer spp., and Plantago spp. airborne pollen presented higher concentrations in the morning, while Alnus spp. and Betula spp. pollen were mainly present during the afternoon. Olea europaea and Platanus spp. pollen were regularly distributed along the day, while Poaceae and Pinus spp. pollen presented two diurnal maxima.     

Airborne bacteria, fungi, and endotoxin levels in residential microenvironments: a case study

Limited data are currently available on the concentrations of airborne bacteria, fungi, and endotoxins in indoor environments. The levels of aerial bacteria and fungi were measured at several microenvironments within a well-ventilated residential apartment in Singapore including the living room, kitchen, bedroom, toilet, and at a workplace environment by sampling indoor air onto culture medium plates using the 6-stage Andersen sampler. Total microbial counts were determined by collecting the air samples in water with the Andersen sampler, staining the resultant extracts with a fluorescent dye, acridine orange, and counting the microbes using a fluorescent microscope. The levels of airborne endotoxins were also determined by sampling the airborne microorganisms onto 0.4?μm polycarbonate membrane filter using the MiniVol sampler at 5?l/min for 20?h with a PM_2.5 cut-off device. The aerial bacterial and fungal concentrations were found to be in the ranges of 117–2,873?CFU/m³ and 160–1,897?CFU/m³, respectively. The total microbial levels ranged from 49,000 to 218,000?microbes/m³. The predominant fungi occurring in the apartment were Aspergillus and Penicillium while the predominant bacterial strains appeared to be Staphylococcus and Micrococcus. The average indoor endotoxin level was detectable in the range of 6–39?EU/m³. The amount of ventilation and the types of human activities carried out in the indoor environment appeared to be important factors affecting the level of these airborne biological contaminants.     

Airborne allergenic microorganisms associated with mushroom cultivation

Exposure to microorganisms, including thermophilic actinomycetes and fungal spores, and to airborne dust produced during compost production and mushroom picking may cause work-related respiratory symptoms. Previous studies have implicated Thermoactinomyces vulgaris and Faenia rectivirgula, the aetiological agents in farmer's lung disease, as causes of these symptoms but these species have been rare in aerobiological studies of mushroom farms. As part of a study of the respiratory health of the exposed workers, we carried out an aerobiological survey of all the stages of commercial mushroom production. Samples of viable airborne microorganisms were collected at a farm from eight locations on two occasions using Andersen cascade impactors. Large numbers of airborne thermophilic actinomycetes, yielding > 10⁶ colony-forming units (cfu) m^?3 air sampled, were associated with compost handling. These were predominantly Thermomonospora spp., while Thermoactinomyces spp. and Faenia rectivirgula were few. Because the compost was largely undisturbed, few airborne actinomycete spores were found in mushroom growing houses, but concentrations of fungal spores exceeded 10⁵ cfu m^?3 when mushrooms were being harvested. Most were Penicillium spp. and Aspergillus fumigatus but Peziza ostracoderma and Trichoderma spp. were also isolated. Workers are thus exposed to a wide range of airborne microorganisms, but the role of many of these in mushroom workers' respiratory symptoms is not yet fully understood.     

Diversity and spatial–temporal distribution of airborne fungi at the world culture heritage site Maijishan Grottoes in China

The deposition of the airborne microorganisms onto cultural heritage is associated closely with the subsequent biodeterioration. In this study, a systematic investigation was carried out to detect the seasonal variation and diversity of airborne fungal concentration at the World Cultural Heritage Site Maijishan Grottoes in western China. A bio-aerosol sampler was deployed to collect samples over four seasons in 2016. The culturable airborne fungi were isolated, purified and then identified with the extraction of genomic DNA, PCR amplification of ITS rRNA region, sequencing, and phylogenetic analysis. The concentrations of culturable fungi ranged from 216 to 1389 CFU/m³, which varied seasonally with significant differences among the sampling sites. Fifteen different fungal genera were confirmed, among them, Cladosporium was the most predominant fungal genus, followed by Penicillium. The fungal community structure and their relationship with environmental factors were also delineated. The spatial–temporal differences of airborne fungi at Maijishan Grottoes were mainly due to height, rainfall, relative humidity, and temperature. The dominant genera Cladosporium and Penicillium may pose potential threats to the ancient painted sculptures and murals, and monitoring of the airborne fungi at such a heritage site could provide supporting data for the pre-warning and control of fungal outbreaks inside the caves for better management.

     

Performance of the Coriolis air sampler,a high-volume aerosol-collection system for quantification of airborne spores and pollen grains

The Coriolis δ air sampler manufactured by Bertin Technologies (France) is a continuous air sampler, dedicated to outdoor monitoring of airborne spores and pollen grains. This high-volume sampler is based on patented Coriolis technology delivering a liquid sample. The air is drawn into a conical vial in a whirling type motion using suction; particles are pulled against the wall by centrifugal force. Airborne particles are separated from the air and collected in a liquid medium. This innovative solution allows rapid analysis by several techniques including PCR assay and serological assay in order to measure the antigenicity/allergenicity of pollen grains and fungal spores. Also, traditional counting of pollen grains or taxa identification by optical microscopy can be done. A study has been carried out by the Health Protection Agency (HPA), Porton Down, UK, to measure the physical efficiency of the Coriolis air sampler. The physical efficiency of the sampler for collection of micro-organism-laden particles of various sizes has been compared with that of membrane filter samplers using the techniques described by ISO 14698-1. The Coriolis was operated simultaneously with membrane filter samplers in a controlled room where they were challenged with uniform-sized particles of different diameters containing bacterial spores. For the larger particle sizes, it was found that the physical efficiency of the Coriolis was 92% for 10-μm particles. The biological performance of the Coriolis in the collection of airborne fungal spores and pollen grains was evaluated in comparison with a Hirst spore trap (one-week tape-on-drum type sampler) which is one of the most frequently used traps in the measurement of outdoor pollen grain concentrations. The advantages and limitations of both technologies are discussed. The Coriolis was operated simultaneously with a Hirst spore trap in the sampling station of Réseau National de Surveillance Aérobiologique, France (RNSA); the pollen grain and fungal spore counts were analysed by optical microscopy. The pollen grain count m⁻³ collected was compared for both devices. The dispersion values were obtained and statistical analysis was carried out. This study shows that the Coriolis air sampler provided equivalent recovery of pollen grain and fungal spores compared with the volumetric trap standard method (not significantly different, W test, α = 0.05). Nowadays, the French-led project, acronym MONALISA, with financial support from the European Commission––Life-Environment (LIFE05 ENV/F/000068), is testing this innovative air sampler in order to measure the antigenicity/allergenicity of the main aeroallergen particles, i.e. Betula (birch), Poaceae (grasses), Parietaria (pellitory), Olea spp (olive tree), and Artemisia (mugwort) pollen grains, and Alternaria (fungal spores) to validate a new approach of monitoring instead of quantifying pollen grains by their morphology. The robustness and efficiency of the MONALISA system is being demonstrated at a national level throughout Europe in eight different countries with different bio-climatic and topography characteristics: France, UK, Finland, Poland, Spain, Portugal, Switzerland, and Italy.     

麦积山石窟赋存环境中空气细菌的时空分布特征

【目的】空气微生物沉降及污染与文化遗产的微生物退化密切相关,本文对世界文化遗产地麦积山石窟赋存环境空气中细菌浓度和群落结构的季节性变化特征进行了系统研究,为石窟环境监测预警和文物预防性保护提供依据。【方法】利用生物气溶胶采样器,在2016年春、夏、秋和冬季分别采集空气样品;基于传统培养方法获得空气中细菌浓度及纯培养菌株;通过提取基因组DNA、扩增细菌16S rRNA、测序和系统发生树等分子技术研究细菌群落时空动态变化规律;结合环境监测数据,分析影响遗产地空气细菌变化的主要因素。【结果】监测期内,空气细菌浓度在(281.20–1409.20)CFU/m3之间,最高浓度出现在MJ4处的夏季,最低浓度出现在MJO处的春季;具有明显季节性变化特征,在空间层位分布上有所差异,但不显著(P0.05)。培养的细菌菌株经鉴定属于4个门11个属;芽孢杆菌属(Bacillus)、Paenarthrobacter、节杆菌属(Arthrobacter)、薄层菌属(Hymenobacter)和考克氏菌属(Kocuria)等为优势属。【结论】麦积山石窟空气细菌群落结构具有明显的季节性和空间分布动态变化特征;在石窟不同层位,空气中细菌群落分布与相对湿度、温度与降雨量相关;部分细菌种属如芽孢杆菌属、微球菌属(Micrococcus),为壁画及彩塑生物腐蚀的潜在病害菌;麦积山石窟及周边环境空气细菌的监测可为石窟保护和旅游开放管理提供重要参考。     

Diversity and characterization of airborne bacteria at two health institutions

The aim of this study was to identify the types and abundance of airborne bacteria of two health institutions (1 and 2) and to determine the genetic association between environmental and clinical isolates of Staphylococcus spp. Environmental sampling in institutions 1 and 2 was conducted for 1 year (dry and rainy seasons) using M Air T sampler. The bacteria and their susceptibility to antibiotics were identified. The colony-forming units per cubic meter (CFU/m³) of air were quantified for all the isolates, and the diversity and abundance of species were calculated. The genetic relationship between the clinical and environmental isolates of S. aureus obtained from institution 1 was established by the UPGMA based on RAPD markers. At both of the institutions, the genera most frequently isolated were Staphylococcus and Bacillus, and the greater concentration of airborne bacteria was detected during the dry season than the rainy season. The lowest diversity and highest dominance was found in the institution 2. On the other hand, at institution 1, the genus that was resistant to antibiotics was Staphylococcus, whereas at institution 2, no isolate was found to be resistant to antibiotics. Furthermore, no association between the clinical and environmental isolates of S. aureus was found. However, one clone was found in different areas of the institution 1. The presence of airborne pathogenic bacteria in institutions 1 and 2 is important to establish the measures for the prevention and control of nosocomial outbreaks.     

Occurrence,antibiotic resistance and enteroxigenicity of Staphylococcus spp. in tonsils of slaughtered pigs in Greece

The aims of the present study were to examine the occurrence of Staphylococcus spp. in the tonsils of slaughtered pigs in a regional slaughterhouse in Greece, the antibiotic resistance of the Staphylococcus spp. isolates, and the enteroxigenicity of the S. aureus isolates. Staphylococcus spp. were isolated in 70 (48·61%) out of the total 144 tonsil samples. The predominant species was S. aureus in coagulase-positive staphylococci (CoPS), while the predominant species were Staphylococcus epidermidis and Staphylococcus saprophyticus in the coagulase-negative staphylococci (CoNS). Staphylococcus spp. isolates presented high antibiotic resistance frequencies to tetracycline (97·1%) or clindamycin (80·0%) and low antibiotic resistance frequencies to fusidic acid (14·3%). No methicillin-resistant S. aureus (MRSA) strains were identified, and all Staphylococcus spp. isolates were susceptible to vancomycin. Among the 26 S. aureus isolates, 21 (80·76%) possessed staphylococcal enterotoxin genes with seven different enterotoxin gene profiles. The predominant enterotoxin profile was seg, sei and sej with seven S. aureus isolates. The occurrence of multidrug resistant Staphylococcus spp. in pig tonsils indicate public health risk to pork consumers and handlers in developing antimicrobial resistance.     

植入物动物感染模型在葡萄球菌生物膜研究中的应用与进展

葡萄球菌生物膜引起的持续性感染及耐药性问题一直是临床治疗的难题,围绕生物膜形成分子机制的研究成为防治葡萄球菌生物膜相关感染的关键。建立葡萄球菌感染动物模型有利于研究体内生物膜形成、扩散、致病机制及药物的体内抗生物膜效果评估等。然而,动物体内生物膜形成的影响因素多,如动物种类、植入材料、接种部位、感染剂量、观察时间及评估方法等均会影响体内生物膜形成。结合本课题研究,系统地总结了近40年来葡萄球菌生物膜感染动物模型,重点综述动物模型的建立方法、适用范围及优缺点,为葡萄球菌生物膜感染的防治提供理论依据。     

Air spore microfungi in dwellings of south of Spain

Summary Indoor and outdoor airborne microfungi were studied in fourteen homes of Córdoba (Spain) for two years. Samplings were done gravimetrically in three rooms in each home and, for comparison, also outdoors. An overall 128 taxa were identified, which were classified according to their occurrence into occasional, frequent and permanent. No statistically significant quantitative differences were found between the microfungi in each room. On the other hand, there were significant quantitative differences between indoor and outdoor microfungi. Spores occurred at their maximum concentrations in spring. Finally,Aspergillus andCladosporium were found to be the most abundant genera indoors and outdoors, respectively.     

Aeromicrobiological studies in the Moscow cathedrals

A microbiological examination of the air has been carried out inside the Moscow Kremlin Cathedrals. Comparison studies on concentrations of airborne microorganisms were performed in different indoor environments -- with and without air-conditioning system, with many and without visitors. The highest values were found indoors with great public attendance and where no air-conditioning system was available. The Gram-positive bacteria were predominant in the air whereas the Gram-negative ones mainly were found on the surface of walls and of stone objects. The majority of airborne microorganisms were capable of producing acid.     

Evaluation of the efficiency of the Coriolis air sampler for pollen detection in South Europe

The Coriolis δ air sampler is a new volumetric air sampler, dedicated to outdoor monitoring of airborne biological particles, including pollen and spores. In the present work, the performance of the Coriolis in the collection of pollen grains was evaluated in comparison with a Hirst spore trap, the most frequently used trap in aerobiological studies, in two cities of South Europe, Evora (Portugal) and Córdoba (Spain). Both concentration values are compared, and statistical analysis was carried out. The present study indicated that, in general, pollen counts for all taxa detected with the Hirst trap were higher than those detected with the Coriolis δ in both cities. In Córdoba, significant differences were detected for all taxa except for Cupressus, Olea and Pinus, while in Evora significant differences were noted for all except Pinus and Poaceae. Differences were particularly marked in species flowering during April and May. In spite of theses differences, Spearman correlation test results showed that the relationship between Hirst and Coriolis curves was always positive and significant (p > 0.01). Regards to the number of detected taxa, the results showed greater diversity for the Hirst sampler in both cities.     

The broad-scale distribution of microfungi in the Windmill Islands region, continental Antarctica

Microfungi were isolated from soils, mosses, algae and lichens in the Windmill Islands region of Antarctica. From a total of 1,228 isolates, 22 genera were identified. The most frequently isolated fungi from mosses were Mycelia sterilia (47% of total isolates), Phoma spp. (18%), Penicillium spp. (11%), Chrysosporium spp. (7%) and Thelebolus microsporus (6%). Mycelia sterilia, Penicillium spp., Mortierella spp., Chrysosporium cf. pannorum and Thelebolus microsporus were also frequently isolated from algae. Fungal distribution and diversity were poor in samples of lichens, compared to samples from mosses and algae. The frequency of occurrence of microfungi was most often associated with strong biotic influence. There was a marked increase in fungal diversity in human-disturbed sites. Twelve taxa were restricted to soils from near the Australian Casey Station, suggesting significant introduction of fungi into this environment by human activities. Away from the station, fungal distribution appeared to be related to substrata and nutrient status rather than dispersal opportunities. Suggestions for future research and the need for constant monitoring to clarify the role of human disturbance on Antarctic fungi are discussed. Received: 1 April 1997 / Accepted: 17 August 1997     

The prevalence of opportunistic pathogens associated with intraoral implants

Aims: The aim of this study was to determine the prevalence and proportions of opportunistic pathogens harboured on orthodontic retainers. Methods and Results: First, Staphylococcus spp. and Candida spp. were isolated from the retainer’s inner surface and from other mucosal surfaces of the subject’s mouth by routine bacterial culture. The prevalence and proportions of these micro‐organisms on retainers was compared in different areas of the mouth within a group of retainer wearers, and mucosal carriage was compared to a group of nonretainer wearers. Staphylococcus spp. were isolated from 50% of the retainers and comprised on average 8·4% of the viable microbiota. Candida spp. comprised 0·13% of the viable microbiota and were recovered from 66·7% of the retainers. Neither genus was isolated from nonretainer wearers. Second, the two most commonly worn retainers manufactured from different materials were sampled; again Staphylococcus spp. and Candida spp. were recovered; however, no statistical differences were observed between the devices. Conclusions: Opportunistic, nonoral, pathogenic micro‐organisms were recovered from orthodontic retainers. Significance and Impact of the Study: It is possible that an orthodontic retainer could be a reservoir for opportunistic pathogens and act as a source of cross‐, self‐ and re‐infection.     

Antibiotic resistance in bacteria associated with coarse atmospheric particulate matter in an urban area

Aims: To assess antibiotic resistance in airborne bacteria associated with coarse particulate matter (PM10) in an urban area, with specific considerations about the Staphylococcus genus. Methods and Results: Disc diffusion test was performed on 243 microbial strains, isolated from PM10 in winter and summer and belonging to families Pseudomonadaceae and Enterobacteriaceae and genera Acinetobacter, Enterococcus and Staphylococcus. Staphylococci resistances were the most heterogeneous, being distributed among almost all tested antibiotics. Staphylococcus isolates resistant to some selected antibiotics were further investigated for the presence of the corresponding genetic determinants. Only tetK, which mediates the tetracycline resistance through the action of an efflux protein, was found in almost all resistant isolates. Conclusions: The lack of specific genetic determinants makes their transmission among staphylococci less likely. This may reduce the theoretical risk associated with the inhalation of airborne micro‐organisms. Significance and Impact of Study: Although the spreading of antibiotic resistant micro‐organisms is of particular concern in clinical settings, the origin of antibiotic resistance genes can be traced in natural environments. As behaviour, viability and transport of bacteria in the atmospheric compartment suffer from a lack of information, the evaluation of the actual risk posed by airborne micro‐organisms to human health is still challenging.     

Outdoor airborne fungi: sampling strategies

Summary A six-stage Andersens's sampler was compared with a single stage type (SAS) for the collection of airborne fungi particles. The efficiency of two non selective culture media, and namely malt agar (MA) and potato dextrose agar (PDA), which were both modified in order to inhibit bacterial growth, was compared as well. An overall assessment of quantitative results suggests that the two samplers have a comparable degree of efficiency. However, the SAS appears to collect a greater number of CFU/m³ in absence of wind and viceversa the Andersen one appears to be more efficient in the presence of wind. The number of species detected with the SAS device is smaller, thus requiring an increased number of suctions. Andersen sampler sieving, according to the aerodynamic characteristics of the particles, appears to be not too accurate: there is an overlap from stage to stage of the sampler and some larger particles settle on smaller particle-collecting stages and viceversa. The PDA, with streptomycin and chloramphenicol, is better and closer to the natural distribution pattern: the number of CFU/m³ is higher although the number of the collected species is about the same.     

An aerobiological study in the rural areas of Aragon (Spain) with a high population of pigs

The development of intensive livestock farming in the swine industry has created problems associated not only with disease control but also with the disposal of excreta and other waste products. Both waste products and animals can contaminate the air of confinement swine buildings and their surroundings. The objective of this work was to determine the concentration and species composition of the bacterial and fungal microflora in the air of different villages with a high population of pigs in their surroundings. Outdoor air sampling was conducted in 24 rural urban nucleus of Aragon (Spain). In each site, three sampling points were done: one in the center of the town, another in the outskirts of the same town, and the last one in the surrounding farms. Microorganisms were isolated with a sampler Surface Air System (S.A.S.). In the quantitative analysis, the potential risk of exposure to airborne microorganisms decreased outside and near of the farms and, of course, in other sampling points, because the airborne levels of total bacteria and fungi found in the three points are similar, slightly higher in the surrounding farms and lower inside of the buildings. The genera Staphylococcus and Bacillus among isolated Grampositive bacteria were the most common, while among the Gram-negative genera often were Alcaligenes and Acinetobacter in most cases observed. In fungi, the most isolated genera were Cladosporium, Aspergillus, Penicillium and Alternaria, which are very important aeroallergens. In this work, were found no differences between the three sampling, which are indicative of few microbial contamination of the air from swine confinement buildings at short distances.     

Antibiotic resistance profiles of coagulase-positive and coagulase-negative staphylococci from pit latrine fecal sludge in a peri-urban South African community

The aim of this study was to assess pit latrine samples from a peri-urban community in KwaZulu-Natal (South Africa) for the presence of multidrug-resistant (MDR) Staphylococcus spp. Standard procedures were used to isolate Staphylococcus spp. from pit latrine fecal sludge samples, with confirmation at genus level by polymerase chain reaction (PCR). Sixty-eight randomly selected pit latrine Staphylococcus spp. isolates were further characterized by using established disk diffusion procedures. An average Staphylococcus spp. count of 2.1?×?10⁵ CFU per g fecal material was established using two randomly selected pit latrine samples. Of the 68-selected Staphylococcus spp. pit latrine isolates, 49% were identified as coagulase positive, 51% as coagulase negative and 65% (12 coagulase positive, 32 coagulase negative isolates) were categorized as MDR. The majority (66/68) of Staphylococcus spp. isolates displayed resistance to fusidic acid while only 5/68 isolates displayed resistance to chloramphenicol. The pit latrine samples analyzed in this study are a source of MDR Staphylococcus spp., highlighting the need for proper hygiene and sanitation regimes in rural communities using these facilities.     

Identification and seasonal distribution of airborne fungi in three horse stables in Italy

Fungal agents are responsible for a variety of respiratory diseases both in humans and animals. The nature and seasonal variations of fungi have been investigated in many environments with wide ranging results. The aims of the present report were (i) to evaluate the quality and magnitude of exposure to airborne fungi in three differently structured equine stalls (open air, partially and completely enclosed buildings) during a one-year period, using an air sampling technique and (ii) to compare the distribution and frequency of fungal species, with regards to these different environments. Air samples were collected monthly from December 2001 to November 2002 by means of a surface air sampler (SAS) Super-90, (PBI International, Milan, Italy). Penicillium and Aspergillus spp. were cultured from all the stables in all seasons. Mucoraceae were also recovered in all seasons in stalls 1 and 2, while they were not isolated in spring and fall in stall 3. These fungi were detected in 28.4%, 72.9% and 60.5% of the total number of samples, respectively. Other fungal genera such as Alternaria, Cladosporium, Fusarium, Beauveria and Drechslera were also occasionally recovered.Viable fungal concentrations varied greatly, ranging from below the limit of detection to more than 3000 CFU/m³ for stables 1 and 2, and 1750 CFU/m³ for stable 3. The median fungal concentration was approximately 178 CFU/m³. Total fungal concentration appeared to be highest in summer, winter and spring, and lowest in the fall.     

Long-run monitoring of bacteria,yeasts and other micromycetes in the air of an industrial conurbation

Three different methods were used for the monitoring of airborne microorganisms: (1). Cultivation of microbes trapped in a single-stage biological impactor directly on a solid agar nutrient medium (meat-pepton agar, Sabouraud's agar, blood agar) in Petri dishes. The repeated yearly course of concentrations of cultivable organisms, or colony-forming units (CFU), was obtained by long-run measurements. (2) Aeresol was trapped by impact on membrane filters, and the microorganisms were cultivated by placing the filters on the agar media as above. (3) Direct microorganism counting in a fluorescence microscope; air was sampled in a four-stage impactor where the aerosol was trapped on microscope slides, and the microorganisms were subsequently stained with fluorescent dyes (fluorescein diacctate, 4;6-diamidino-2-phenylindole and, particular, ethidium bromide).

The highest microorganism counts were obtained by using the fluorescence method, the direct cultivation method gave counts an order of magnitude lower, and the method of cultivation on filters gave values approximately 10 times lower than the conventional cultivation.

High variations in the airborne CFU concentrations over the year were observed in Prague. Over the winter season the variations in the amounts of airborne bacteria and other micromycetes as well as the amounts themselves were lower than in the remaining seasons. In the spring and in the summer, the concentrations of yeasts and other micromycetes were highest, whereas in the autumn the concentrations of the microorganisms decreased. Among the bacteria cultivated form the airborne aerosol, the genera Micrococcus, Bacillus, Neisseria and Corynebacterium predominated. The prevailing genera of micromycetes were Penicillium, Aspergillus and Cladosporium.

The concentrations of microorganisms in free air were also affected by the local weather conditions, temperature in particular, the overall air pollution by aerosols was of minor importance in this respect.