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Cj0859c variants fspA1 and fspA2 from 669 human, poultry, and bovine Campylobacter jejuni strains were associated with certain hosts and multilocus sequence typing (MLST) types. Among the human and poultry strains, fspA1 was significantly (P < 0.001) more common than fspA2. FspA2 amino acid sequences were the most diverse and were often truncated.Campylobacter jejuni is the leading cause of bacterial gastroenteritis worldwide and responsible for more than 90% of Campylobacter infections (7). Case-control studies have identified consumption or handling of raw and undercooked poultry meat, drinking unpasteurized milk, and swimming in natural water sources as risk factors for acquiring domestic campylobacteriosis in Finland (7, 9). Multilocus sequence typing (MLST) has been employed to study the molecular epidemiology of Campylobacter (4) and can contribute to virulotyping when combined with known virulence factors (5). FspA proteins are small, acidic, flagellum-secreted nonflagellar proteins of C. jejuni that are encoded by Cj0859c, which is expressed by a σ28 promoter (8). Both FspA1 and FspA2 were shown to be immunogenic in mice and protected against disease after challenge with a homologous strain (1). However, FspA1 also protected against illness after challenge with a heterologous strain, whereas FspA2 failed to do the same at a significant level. Neither FspA1 nor FspA2 protected against colonization (1). On the other hand, FspA2 has been shown to induce apoptosis in INT407 cells, a feature not exhibited by FspA1 (8). Therefore, our aim was to study the distributions of fspA1 and fspA2 among MLST types of Finnish human, chicken, and bovine strains.In total, 367 human isolates, 183 chicken isolates, and 119 bovine isolates (n = 669) were included in the analyses (3). PCR primers for Cj0859c were used as described previously (8). Primer pgo6.13 (5′-TTGTTGCAGTTCCAGCATCGGT-3′) was designed to sequence fspA1. Fisher''s exact test or a chi-square test was used to assess the associations between sequence types (STs) and Cj0859c. The SignalP 3.0 server was used for prediction of signal peptides (2).The fspA1 and fspA2 variants were found in 62.6% and 37.4% of the strains, respectively. In 0.3% of the strains, neither isoform was found. Among the human and chicken strains, fspA1 was significantly more common, whereas fspA2 was significantly more frequent among the bovine isolates (Table (Table1).1). Among the MLST clonal complexes (CCs), fspA1 was associated with the ST-22, ST-45, ST-283, and ST-677 CCs and fspA2 was associated with the ST-21, ST-52, ST-61, ST-206, ST-692, and ST-1332 CCs and ST-58, ST-475, and ST-4001. Although strong CC associations of fspA1 and fspA2 were found, the ST-48 complex showed a heterogeneous distribution of fspA1 and fspA2. Most isolates carried fspA2, and ST-475 was associated with fspA2. On the contrary, ST-48 commonly carried fspA1 (Table (Table1).1). In our previous studies, ST-48 was found in human isolates only (6), while ST-475 was found in both human and bovine isolates (3, 6). The strict host associations and striking difference between fspA variants in human ST-48 isolates and human/bovine ST-475 isolates suggest that fspA could be important in host adaptation.

TABLE 1.

Percent distributions of fspA1 and fspA2 variants among 669 human, poultry, and bovine Campylobacter jejuni strains and their associations with hosts, STs, and CCs
Host or ST complex/ST (no. of isolates)% of strains witha:
P valueb
fspA1fspA2
Host
    All (669)64.335.4
    Human (367)69.530.0<0.001
    Poultry (183)79.220.8<0.001
    Bovine (119)25.274.8<0.0001
ST complex and STs
    ST-21 complex (151)2.697.4<0.0001
        ST-50 (76)NF100<0.0001
        ST-53 (19)NF100<0.0001
        ST-451 (9)NF100<0.0001
        ST-883 (11)NF100<0.0001
    ST-22 complex (22)100NF<0.0001
        ST-22 (11)100NF<0.01
        ST-1947 (9)100NF0.03
    ST-45 complex (268)99.30.7<0.0001
        ST-11 (7)100NFNA
        ST-45 (173)99.40.6<0.0001
        ST-137 (22)95.54.50.001
        ST-230 (14)100NF<0.0001
    ST-48 complex (18)44.455.6NA
        ST-48 (7)100NFNA
        ST-475 (8)NF100<0.001
    ST-52 complex (5)NF100<0.01
        ST-52 (4)NF1000.02
    ST-61 complex (21)NF100<0.0001
        ST-61 (11)NF100<0.0001
        ST-618 (3)NF1000.04
    ST-206 complex (5)NF100<0.01
    ST-283 complex (24)100NF<0.0001
        ST-267 (23)100NF<0.0001
    ST-677 complex (59)100NF<0.0001
        ST-677 (48)100NF<0.0001
        ST-794 (11)100NF<0.001
    ST-692 complex (3)NF1000.04
    ST-1034 complex (5)NF80NA
        ST-4001 (3)NF1000.04
    ST-1287 complex/ST-945 (8)100NFNA
    ST-1332 complex/ST-1332 (4)NF1000.02
    Unassigned STs
        ST-58 (6)NF100<0.01
        ST-586 (6)100NFNA
Open in a separate windowaIn 0.3% of the strains, neither isoform was found. NF, not found.bNA, not associated.A total of 28 isolates (representing 6 CCs and 13 STs) were sequenced for fspA1 and compared to reference strains NCTC 11168 and 81-176. All isolates in the ST-22 CC showed the same one-nucleotide (nt) difference with both NCTC 11168 and 81-176 strains, resulting in a Thr→Ala substitution in the predicted protein sequence (represented by isolate FB7437, GenBank accession number HQ104931; Fig. Fig.1).1). Eight other isolates in different CCs showed a 2-nt difference (isolate 1970, GenBank accession number HQ104932; Fig. Fig.1)1) compared to strains NCTC 11168 and 81-176, although this did not result in amino acid substitutions. All 28 isolates were predicted to encode a full-length FspA1 protein.Open in a separate windowFIG. 1.Comparison of FspA1 and FspA2 isoforms. FspA1 is represented by 81-176, FB7437, and 1970. FspA2 is represented by C. jejuni strains 76763 to 1960 (GenBank accession numbers HQ104933 to HQ104946). Scale bar represents amino acid divergence.In total, 62 isolates (representing 7 CCs and 35 STs) were subjected to fspA2 sequence analysis. Although a 100% sequence similarity between different STs was found for isolates in the ST-21, ST-45, ST-48, ST-61, and ST-206 CCs, fspA2 was generally more heterogeneous than fspA1 and we found 13 predicted FspA2 amino acid sequence variants in total (Fig. (Fig.1).1). In several isolates with uncommon and often unassigned (UA) STs, the proteins were truncated (Fig. (Fig.1),1), with most mutations being ST specific. For example, all ST-58 isolates showed a 13-bp deletion (isolate 3074_2; Fig. Fig.1),1), resulting in a premature stop codon. Also, all ST-1332 CC isolates were predicted to have a premature stop codon by the addition of a nucleotide between nt 112 and nt 113 (isolate 1960; Fig. Fig.1),1), a feature shared with two isolates typed as ST-4002 (UA). A T68A substitution in ST-1960 (isolate T-73494) also resulted in a premature stop codon. Interestingly, ST-1959 and ST-4003 (represented by isolate 4129) both lacked one triplet (nt 235 to 237), resulting in a shorter FspA2 protein. SignalP analysis showed the probability of a signal peptide between nt 22 and 23 (ACA-AA [between the underlined nucleotides]). An A24C substitution in two other strains, represented by isolate 76580, of ST-693 and ST-993 could possibly result in a truncated FspA2 protein as well.In conclusion, our results showed that FspA1 and FspA2 showed host and MLST associations. The immunogenic FspA1 seems to be conserved among C. jejuni strains, in contrast to the heterogeneous apoptosis-inducing FspA2, of which many isoforms were truncated. FspA proteins could serve as virulence factors for C. jejuni, although their roles herein are not clear at this time.  相似文献   

3.
Although campylobacters have been isolated from a wide range of animal hosts, the association between campylobacters isolated from humans and animals in the farm environment is unclear. We used flagellin gene typing and pulsed-field gel electrophoresis (PFGE) to investigate the genetic diversity among isolates from animals (cattle, sheep, and turkey) in farm environments and sporadic cases of campylobacteriosis in the same geographical area. Forty-eight combined fla types were seen among the 315 Campylobacter isolates studied. Six were found in isolates from all four hosts and represented 50% of the total number of isolates. Seventy-one different SmaI PFGE macrorestriction profiles (mrps) were observed, with 86% of isolates assigned to one of 29 different mrps. Fifty-seven isolates from diverse hosts, times, and sources had an identical SmaI mrp and combined fla type. Conversely, a number of genotypes were unique to a particular host. We provide molecular evidence which suggests a link between campylobacters in the farm environment with those causing disease in the community.  相似文献   

4.
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Highlights
  • •Protein N-glycosylation is essential for nitrate reductase (Nap) activity in C. jejuni.
  • •Removal of N-glycosylation results in a metabolic switch from Asp to Pro uptake.
  • N-glycosylation is required for optimal chemotaxis towards several substrates.
  • •Loss of N-glycosylation reduces survival following temperature and osmotic shock.
  相似文献   

5.
Campylobacter jejuni is one of the most important causes of human diarrhea worldwide. In the present work, multilocus sequence typing was used to study the genotypic diversity of 145 C. jejuni isolates from 135 chicken meat preparations sampled across Belgium. Isolates were further typed by pulsed-field gel electrophoresis, and their susceptibilities to six antimicrobials were determined. Fifty-seven sequence types (STs) were identified; 26.8% of the total typed isolates were ST-50, ST-45, or ST-257, belonging to clonal complex CC-21, CC-45, or CC-257, respectively. One clonal group comprised 22% (32/145) of all isolates, originating from five different companies and isolated over seven sampling months. Additionally, 53.1% of C. jejuni isolates were resistant to ciprofloxacin, and 48.2% were resistant to tetracycline; 28.9% (42/145) of all isolates were resistant to both ciprofloxacin and tetracycline. The correlation between certain C. jejuni clonal groups and resistance to ciprofloxacin and tetracycline was notable. C. jejuni isolates assigned to CC-21 (n = 35) were frequently resistant to ciprofloxacin (65.7%) and tetracycline (40%); however, 90% (18/20) of the isolates assigned to CC-45 were pansusceptible. The present study demonstrates that certain C. jejuni genotypes recur frequently in the chicken meat supply. The results of molecular typing, combined with data on sample sources, indicate a possible dissemination of C. jejuni clones with high resistance to ciprofloxacin and/or tetracycline. Whether certain clonal groups are common in the environment and repeatedly infect Belgian broiler flocks or whether they have the potential to persist on farms or in slaughterhouses needs further investigation.Campylobacter jejuni is among the most common bacterial causes of human gastroenteritis worldwide (4, 23). Infected humans exhibit a range of clinical symptoms from mild, watery diarrhea to severe inflammatory diarrhea (14). In addition, C. jejuni has been identified as an important infectious trigger for Guillain-Barré syndrome, the most common cause of acute flaccid paralysis in polio-free regions (16). Another issue of concern regarding Campylobacter is the increase in antimicrobial resistance appearing in various regions around the world (1). Infection with an antimicrobial-resistant Campylobacter strain may lead to a suboptimal outcome of antimicrobial treatment or even to treatment failure (11).Consumption of contaminated water and raw milk has been implicated in campylobacteriosis outbreaks (23). However, the majority of human cases are sporadic, and consumption or mishandling of contaminated raw or undercooked poultry meat is believed to be an important source of infection. Risk assessment studies, outbreak investigations, and case-control reports all incriminate chicken meat as a major source, perhaps the major source, of food-borne transmission (14, 17, 32, 48). In Belgium in 1999, a controlled withdrawal of poultry products from sale due to alleged dioxin contamination resulted in a 40% reduction in the frequency of human campylobacteriosis (44). Thereafter and since the year 2000, the Campylobacter contamination of Belgian poultry carcasses and meat has been monitored by the Federal Agency for the Safety of the Food Chain, and the rate of positive samples is regarded as high. In 2006, 55.5% of cecal samples (n = 6,443) from Belgian broilers at slaughter tested positive for Campylobacter (3). In 2007, an industry-focused survey reported that 48% of Belgian chicken meat preparations (n = 656) were contaminated with Campylobacter (19).Molecular typing is an important tool in elucidating the diversity and transmission routes of Campylobacter isolates contaminating the food chain. In the United States, molecular analysis of Campylobacter spp. from poultry production and processing environments showed that many of the clones found within a flock are present in the final products, although the diversity of Campylobacter isolates in the final product was lower than that observed in the flock (22). Furthermore, numerous molecular epidemiological studies indicate that the genotypes of C. jejuni isolated from human cases overlap those of poultry origin (17, 47). Various molecular typing methods for the study of the population structure of Campylobacter are currently available (46). Among these, the multilocus sequence typing (MLST) approach is an emerging tool for research on the population structure and molecular epidemiology of Campylobacter. The technique is highly reproducible, portable, and easy to interpret, and results can be shared through a publicly accessible online database (31, 34). As such, MLST is becoming an important tool for studying the molecular epidemiology of Campylobacter in a global context. The accumulation of sequence typing data generated from different countries and settings could allow the creation of more-sophisticated models of the epidemiology and evolution of bacterial pathogens and the development of improved approaches for combating their spread (41).In Belgium, there is a paucity of information regarding the population structure of Campylobacter in the chicken meat supply. No population-based surveys have been conducted to investigate the molecular epidemiology of C. jejuni in chicken meat at points close to human consumption. In this study, MLST and pulsed-field gel electrophoresis (PFGE) were used to characterize the diversity of, and clonal relationships among, 145 C. jejuni isolates from Belgian chicken meat preparations. In addition, we characterized the antimicrobial resistance in this collection and correlated it with C. jejuni genotypes.  相似文献   

6.
Neisseria meningitidis is a commensal and accidental pathogen exclusively of humans. Although the production of polysaccharide capsules is considered to be essential for meningococcal virulence, there have been reports of constitutively unencapsulated strains causing invasive meningococcal disease (IMD). Here we report the genome sequence of a capsule null locus (cnl) strain of sequence type 198 (ST-198), which is found in half of the reported cases of IMD caused by cnl meningococcal strains.  相似文献   

7.
One of the pathways involved in the acquisition of the essential metal iron by bacteria involves the reduction of insoluble Fe3+ to soluble Fe2+, followed by transport of Fe2+ to the cytoplasm. Flavins have been implicated as electron donors in this poorly understood process. Ferrous iron uptake is essential for intestinal colonization by the important pathogen Campylobacter jejuni and may be of particular importance under low-oxygen conditions. In this study, the links among riboflavin biosynthesis, ferric reduction, and iron acquisition in C. jejuni NCTC11168 have been investigated. A riboflavin auxotroph was generated by inactivation of the ribB riboflavin biosynthesis gene (Cj0572), and the resulting isogenic ribB mutant only grew in the presence of exogenous riboflavin or the riboflavin precursor diacetyl but not in the presence of the downstream products flavin adenine dinucleotide and flavin mononucleotide. Riboflavin uptake was unaffected in the ribB mutant under iron-limited conditions but was lower in both the wild-type strain and the ribB mutant under iron-replete conditions. Mutation of the fur gene, which encodes an iron uptake regulator of C. jejuni, resulted in an increase in riboflavin uptake which was independent of the iron content of the medium, suggesting a role for Fur in the regulation of the as-yet-unknown riboflavin transport system. Finally, ferric reduction activity was independent of iron availability in the growth medium but was lowered in the ribB mutant compared to the wild-type strain and, conversely, increased in the fur mutant. Taken together, the findings confirm close relationships among iron acquisition, riboflavin production, and riboflavin uptake in C. jejuni.  相似文献   

8.
Campylobacter jejuni can be isolated from different animal hosts. Various studies have used multilocus sequence typing to look for associations between particular clones of C. jejuni and specific hosts. Here, we describe the isolation of a novel clone (sequence type 3704 [ST-3704]) of C. jejuni associated with the bank vole (Myodes glareolus).Campylobacter jejuni is one of the most common causes of gastroenteritis in humans, with food (primarily chicken) believed to be the main vehicle for infection (8). Although high prevalences are found in livestock, C. jejuni has also been isolated from wildlife, including wild birds and wild mammals, and from the farm environment (1, 2, 4, 7, 11, 13). Multilocus sequence typing (MLST) has been used to study the distribution of specific clones among isolates from different hosts and the environment (1, 2, 3, 7, 10, 15, 16, 17). Such molecular epidemiological studies have provided evidence for some host-associated genotypes. For example, some MLST clonal complexes are associated with cattle (sequence type 61 [ST-61] and ST-42 complexes), whereas others are associated with wildlife, such as rabbits and wild birds, and environmental samples (ST-45, ST-177, ST-677, ST-682, and ST-952 complexes) (2, 4, 13). In addition, previously unreported sequence types have been identified in wildlife and environmental samples (4). In this study, we describe the identification of a novel strain of C. jejuni that represents a new sequence type and that is restricted primarily to one wildlife host, namely, bank voles (Myodes glareolus), from which it was isolated over a relatively wide geographic area and time period.We undertook longitudinal studies of feces collected from the sympatric wild rodents bank voles and wood mice (Apodemus sylvaticus) in a private West Cheshire (United Kingdom) woodland habitat. Feces collected from both species were analyzed for the presence of Campylobacter spp. during two sampling periods (May to July 2001 and January 2003). In 2004 (summer/autumn) and 2005 (winter/spring), cross-sectional surveys were conducted on 6 farms (5 dairy and 1 beef farm) in South Cheshire (approximately 30 km away) to investigate the role of wildlife as reservoirs of zoonotic enteric pathogens for livestock. Farms were sampled in summer/autumn on one occasion and in winter/spring on a second occasion; feces were collected from cattle, from wild mammals opportunistically, and from live-trapped rodents. For the isolation of Campylobacter spp., approximately 0.2 ml of fecal homogenate (1:1 feces in brain heart infusion broth) was added to campylobacter enrichment broth containing 5% (vol/vol) lysed horse blood (Southern Group Labs, Corby, United Kingdom), and samples were incubated at 37°C for 24 h under microaerobic conditions in a variable-atmosphere incubator (Don Whitley Scientific Ltd., Shipley, United Kingdom) before being inoculated onto campylobacter blood-free medium containing cefoperazone and amphotericin. These plates were incubated for up to 96 h at 37°C under microaerobic conditions before being examined for the presence of colonies characteristic of Campylobacter spp. All media were obtained from LabM (IDG), Bury, United Kingdom. Suspect isolates were presumptively identified as C. jejuni by Gram staining, no growth in air, and hippurate hydrolysis (6, 18) tests. For further assignment to species, cell lysates were prepared from isolates and subjected to a number of genus- and species-specific PCR assays (5, 14, 19). The whole genome sequence was obtained from bank vole strain C414 by shotgun sequencing.Of the samples obtained from woodland rodents, 23% (10/43) of bank vole samples collected from May to July 2001 and 51% (38/75) collected in January 2003 were positive for Campylobacter spp., whereas Campylobacter spp. were not recovered from any wood mouse samples (40 samples collected from May to July 2001 and 31 samples collected in January 2003). For the farm rodents (samples collected from September 2004 to April 2005), a total of 655 wood mice and 194 bank voles were sampled. In total, 18% (34/194) of bank voles were positive for Campylobacter spp., compared to 1% (6/655) of wood mice (Table (Table1).1). In total, 151 isolates were identified as Campylobacter spp. by using a genus-level 16S rRNA gene PCR assay (14). However, of all of these rodent isolates, only three isolates from wood mice from the farm survey could be identified as C. jejuni by species-specific PCR assays. The remaining rodent isolates from both the woodland and the farm study did not give any amplicons using species-specific PCR assays (5, 14, 19).

TABLE 1.

Number of samples from rodents captured in the woodland and farm studies, as well as from cattle in the farm study, positive for Campylobacter jejuni and specifically for ST-3704
Animal speciesBacterial species or strainNo. of positive samples/total no. of samples
Woodland study
Farm study (2004-2005)
May-July 2001January 2003
Bank volesC. jejuni10/4338/7534/194
C. jejuni ST-370410/4338/7534/194
Wood miceC. jejuni0/400/316/655
C. jejuni ST-3704NAaNA3/655
CattleC. jejuniNANA12/497
C. jejuni ST-3704NANA1/497
Open in a separate windowaNA, not applicable.Two of these PCR assays targeted the hipO gene (14, 19) and used the same gene sequence (GenBank accession no. z36940) for design of the primers, and this gene shares only 90% homology with the hipO gene of bank vole strain C414 (data not shown). Furthermore, the other PCR assay used to identify C. jejuni targeted the ceuE gene (5), and the ceuE gene of C414 shares only 92% homology with the ceuE gene of NCTC11168 (data not shown). The primer binding sites were also divergent for these targets in C414 (5, 19) or were not present at all (14). By use of the method of Karenlampi et al. (9), which involves PCR amplification and sequencing of a groEL fragment, all of the bank vole isolates from the woodland study and one bank vole isolate from the farm study were found to have the same sequence. This sequence (C414, GenBank accession number HQ213856) was aligned with partial groEL sequences from other Campylobacter isolates, and phylogenetic trees were inferred from this alignment by using algorithms within the MEGA4 software package (12). In these trees, C414 clustered with C. jejuni strains and not with C. coli strains (Fig. (Fig.1).1). Hence, both hippurate hydrolysis (18) testing and partial groEL sequence analysis suggested that the bank vole-associated isolates were C. jejuni.Open in a separate windowFIG. 1.Evolutionary relationships of strain C414, C. jejuni, C. coli, and C. lari. The evolutionary history was inferred using the minimum evolution (ME) method. The bootstrap consensus tree was inferred from 500 replicates. The percentages of replicate trees in which the associated taxa clustered together in the bootstrap test are shown next to the branches. The tree is drawn to scale, with branch lengths in the same units as those for the evolutionary distances used to infer the phylogenetic tree. The evolutionary distances were computed using the maximum composite likelihood method and are reported in units of the number of base substitutions per site. The ME tree was searched using a close-neighbor-interchange (CNI) algorithm at a search level of 3. A neighbor-joining algorithm was used to generate the initial tree. Codon positions included were first plus second plus third plus noncoding positions. There were a total of 540 positions in the final data set. Phylogenetic analyses were conducted in MEGA4 (12).MLST analysis was carried out on 41 bank vole isolates from the woodland study and 34 bank vole isolates and 6 wood mouse isolates from the farm studies, with each isolate representative of a single sample, using the method of Dingle et al. (3). For each of the seven loci, a new allele was identified (aspA227, glnA297, gltA253, glyA338, pgm-424, tkt-337, and uncA250), generating a new sequence type, ST-3704, for all of the bank vole isolates tested (100% C. jejuni-positive samples). ST-3704 was also identified in 3 wood mouse isolates (3/6 samples), with the remaining isolates representing known sequence types (ST-61 and ST-583). Other C. jejuni isolates (n = 16) from the farm cross-sectional studies were also subjected to MLST analysis, and 15 of these belonged to known sequence types (ST-45, ST-61, ST-257, and ST-403); however, one calf isolate (1/12 C. jejuni-positive samples from cattle) was identified as ST-3704 (Table (Table1).1). Furthermore, more recently (September 2008), we isolated C. jejuni ST-3704, but no other sequence type, from the F1 progeny of a captive colony of bank voles. These animals were fed an artificial diet, which suggests that this clone can be maintained in captive bred animals with no environmental exposure and is therefore strongly associated with the bank vole host. A selection of ST-3704 bank vole isolates (n = 76) from both the woodland and the farm study, the three ST-3704 wood mouse isolates, and other Campylobacter isolates from cattle were subjected to genotyping using macrorestriction pulsed-field gel electrophoresis (PFGE) and analyzed as described previously (11). Remarkably, all 79 of the ST-3704 isolates examined shared similar macrorestriction patterns (<3 bands different) following digestion with SmaI, suggesting that they represent a single clone circulating largely within bank vole populations. Sample macrorestriction patterns for isolates from bank voles from different sources are shown in Fig. Fig.2,2, which also includes examples of other C. jejuni isolates whose banding patterns are more typical of those normally observed for C. jejuni and for C. fetus isolates from cattle.Open in a separate windowFIG. 2.SmaI PFGE analysis of C. jejuni ST-3704, C. jejuni isolates belonging to other sequence types, and C. fetus isolates from bank voles (BV), wood mice (WM), and cows from four Cheshire farms (F1, F2, F3, and F4). Lane λ, lambda ladder PFGE marker (New England Biolabs, Hitchin, United Kingdom).Thus, we report the identification of a new strain of C. jejuni, ST-3704, isolated from different bank vole populations over a relatively wide geographic area with respect to the home range of bank voles, as well as in a captive colony containing F1 individuals, over a period of 7 years. Representatives of this strain could not easily be identified to the species level by using current PCR assays. Isolates of the clone are indistinguishable by MLST and share similar PFGE patterns. Although we have also detected ST-3704 rarely among samples from other animal hosts, including those sharing the same habitat, we isolated ST-3704 largely from the bank vole. Our observations suggest that ST-3704 represents a novel clone of C. jejuni associated with the bank vole host.  相似文献   

9.
10.
11.
The ability of various subsets of poultry intestinal microbiota to protect turkeys from colonization by Campylobacter jejuni was investigated. Community subsets were generated in vivo by inoculation of day-old poults with the cecal contents of a Campylobacter-free adult turkey, followed by treatment with one antimicrobial, either virginiamycin, enrofloxacin, neomycin, or vancomycin. The C. jejuni loads of the enrofloxacin-, neomycin-, and vancomycin-derived communities were decreased by 1 log, 2 logs, and 4 logs, respectively. Examination of the constituents of the derived communities via the array-based method oligonucleotide fingerprinting of rRNA genes detected a subtype of Megamonas hypermegale specific to the C. jejuni-suppressive treatments.Campylobacter jejuni, a spiral, flagellated epsilonproteobacterial commensal of poultry, is the predominant cause of bacterial food-borne illness in the United States, resulting in approximately 2 million cases per year. A role for endogenous poultry intestinal microbiota in competitive exclusion (CE) of Campylobacter was first investigated in 1982 (38). Since then, numerous studies have attempted to identify microbes associated with Campylobacter CE. Suspensions of intestinal bacteria, isolated from Campylobacter-free adult poultry and passaged under strict anaerobic conditions, were found to protect chicks from colonization by the pathogen (31). Bacteria derived from the scrapings of broiler intestinal mucosa were proven more effective than the earlier fecal culture, a result not surprising, as Campylobacter is known to preferentially colonize cecal crypts (4, 39). The CE function of the bacterial suspensions decreased with time in storage, however (39, 40). Evidence also indicates that CE may depend on the presence of strictly anaerobic bacteria (31). As an oxygen gradient likely occurs from the host epithelium into the luminal contents, a CE role for both mucosal and luminal microbes in concert is likely.Attempts have been made to identify specific microbes antagonistic to Campylobacter, and initial attempts isolated mucin-dwelling organisms with in vitro antagonistic effects against the pathogen (35, 36). Recent experiments have identified numerous bacterial groups producing anti-Campylobacter bacteriocins (29, 41, 42, 44, 45). Direct treatment of market-weight birds with the therapeutic bacteriocin Enterococcus faecium E 50-52 is effective for removal of Campylobacter spp. immediately prior to slaughter (44).Despite progress toward a solution to contamination of poultry products by Campylobacter species, incomplete or intermittent CE protection, combined with a lack of studies addressing long-term CE efficacy, indicates that the Campylobacter colonization problem is far from solved (35). In addition, risk factors for campylobacteriosis other than direct consumption of contaminated poultry include consumption of fresh vegetables and bottled water (14). Campylobacter has been found in poultry manure used to fertilize crops as well as in runoff from these farms (22, 24, 50). We believe that novel approaches for studying microbial ecology in the gut are necessary for development of intervention strategies, including competitive exclusion.The work described here takes a functional approach to identify microbes associated with protection of the intestine from Campylobacter jejuni colonization, an approach we are calling antibiotic dissection. The cecal contents from a Campylobacter-free adult turkey were inoculated into day-old poults and the microbial communities in these poults modified by treatment with therapeutic levels of antibiotics. The resulting modified microbiota were then tested for the ability to outcompete a C. jejuni challenge, and a microbe potentially associated with C. jejuni exclusion was identified.  相似文献   

12.
Campylobacter jejuni is widely distributed in the environment, and river water has been shown to carry high levels of the organism. In this study, 244 C. jejuni isolates from three river catchment areas in New Zealand were characterized using multilocus sequence typing. Forty-nine of the 88 sequence types identified were new. The most common sequence types identified were ST-2381 (30 isolates), ST-45 (25 isolates), and ST-1225 (23 isolates). The majority of the sequence types identified in the river water could be attributed to wild bird fecal contamination. Two novel clonal complexes (CC) were identified, namely, CC ST-2381 (11 sequence types, 46 isolates) and CC ST-3640 (6 sequence types, 12 isolates), in which all of the sequence types were new. CC ST-2381 was the largest complex identified among the isolates and was present in two of the three rivers. None of the sequence types associated with the novel complexes has been identified among human isolates. The ST-2381 complex is not related to complexes associated with cattle, sheep, or poultry. The source of the novel complexes has yet to be identified.Contamination of the environment by bacterial pathogens is a significant health concern, as it provides a continuous source of organisms for the infection and reinfection of humans and animals. Enteric pathogens gain entry into the environment through the discharge of sewage into water and via contamination from animal feces (22). Fecal contamination is responsible for the continued presence and spread of a range of pathogenic organisms, including Campylobacter, norovirus, and Escherichia coli O157. Determining the roles of various environmental sources in human enteric disease requires an understanding of the distribution, survival, population structure, and pathogenic potential of the pathogens in the environment.Campylobacter is the most common cause of gastrointestinal illness in the industrialized world (17), imposing significant economic costs on health systems, and is associated with a number of neurological sequelae (32, 33). The majority of human campylobacter infections are caused by Campylobacter jejuni (90%), with Campylobacter coli mostly responsible for the remainder. Although Campylobacter has been isolated from a wide range of animals (41) and birds (47, 48), contaminated poultry and poultry products remain the most significant sources of human infections (10, 38, 50, 51). Campylobacter is a spiral gram-negative organism that grows best under low-oxygen conditions at 42°C. The organism is unable to grow outside an animal host, and survival in the environment is dependent on ambient temperature, oxygen levels, and sunlight.Studies worldwide examining rivers and waterways show that there is significant contamination by Campylobacter, with the sources being sewage outflow, direct fecal deposition, and pasture runoff (12, 22, 34, 37, 39). Similarly, coastal waters and estuaries can be contaminated by either sewage or bird fecal deposition (23, 35). The inability of Campylobacter to grow in the environment and its sensitivity to sunlight are thought to ensure that the organism is eventually purged from the system. However, the high levels of the organism identified in water systems have been highlighted as a risk for human infection.The characterization of campylobacter populations by multilocus sequence typing (MLST) has shown that the organism is weakly clonal and that certain clonal complexes are associated with particular animals (5, 9, 26). Isolates from human cases of infection show a wide variety of sequence types and many clonal complexes. Source attribution studies using MLST have identified poultry as causing approximately 60% of human infections (14, 38, 50). Cattle have been identified as a potential source of infection due to the high level of similarity between bovine and human strains (18, 19). There remains, however, a significant number of infections for which the source is not certain.New Zealand has one of the highest rates of campylobacteriosis in the developed world. This is due to the significant quantity of fresh chicken consumed coupled with high levels of contamination found in poultry products (1, 10, 51, 52). Campylobacter has been isolated from a range of environmental sources within New Zealand, including its rivers and streams (12, 37). Isolation rates for rivers in New Zealand range from 55 to 90%, comparable to results of studies overseas, and show the same seasonal variation as that seen elsewhere in the world (20). Pulsed-field gel electrophoresis (PFGE) analysis identified indistinguishable macrorestriction profiles for cattle, human, and river isolates, suggesting river water as a potential source of infection (8). In this study, C. jejuni isolates from three rivers in New Zealand, two on the South Island and one on the North Island, were characterized using MLST.  相似文献   

13.
The creation of restriction enzymes with programmable DNA-binding and -cleavage specificities has long been a goal of modern biology. The recently discovered Type IIL MmeI family of restriction-and-modification (RM) enzymes that possess a shared target recognition domain provides a framework for engineering such new specificities. However, a lack of structural information on Type IIL enzymes has limited the repertoire that can be rationally engineered. We report here a crystal structure of MmeI in complex with its DNA substrate and an S-adenosylmethionine analog (Sinefungin). The structure uncovers for the first time the interactions that underlie MmeI-DNA recognition and methylation (5’-TCCRAC-3’; R = purine) and provides a molecular basis for changing specificity at four of the six base pairs of the recognition sequence (5’-TCCRAC-3’). Surprisingly, the enzyme is resilient to specificity changes at the first position of the recognition sequence (5’-TCCRAC-3’). Collectively, the structure provides a basis for engineering further derivatives of MmeI and delineates which base pairs of the recognition sequence are more amenable to alterations than others.  相似文献   

14.
The genetic investigation of Campylobacter jejuni, an important gastrointestinal pathogen, has been hampered by the lack of an efficient system for introduction of exogenous genetic information, as commonly used vectors designed for Escherichia coli and other bacteria cannot be maintained in Campylobacter cells. Additionally, gene expression in Campylobacter requires the presence of species-specific promoters. In this study we exploited the availability of several conserved copies of rRNA gene clusters for insertion of various genes into the chromosome by homologous recombination. The high conservation of the rRNA sequences means that the procedure can be applied to other Campylobacter strains. The presence of a Campylobacter-derived promoter in this vector ensures expression of exogenous genes in target cells. The efficiency of the procedure was demonstrated by complementation of mutations in two strains of Campylobacter. In addition, we applied the system for introduction and expression of a green fluorescent protein (GFP). GFP-expressing Campylobacter allowed visualization of sessile bacteria attached to a glass surface in stationary liquid culture. The study demonstrated that the attached bacteria contained an assemblage of coccoid and spiral forms with liquid channels preserving viable highly motile cells. We demonstrate a novel universal procedure for gene delivery and expression that can be used as an efficient tool to study this poorly understood pathogen. The principles developed in this study could be more widely applied for the manipulation of other bacteria that are refractory to genetic analysis.  相似文献   

15.
Campylobacter species, primarily Campylobacter jejuni and Campylobacter coli, are regarded as a major cause of human gastrointestinal disease, commonly acquired by eating undercooked chicken. We describe a PCR-ELISA for the detection of Campylobacter species and the discrimination of C. jejuni and C. coli in poultry samples. The PCR assay targets the 16S/23S ribosomal RNA intergenic spacer region of Campylobacter species with DNA oligonucleotide probes designed for the specific detection of C. jejuni, C. coli, and Campylobacter species immobilized on Nucleo-Link wells and hybridized to PCR products modified with a 5' biotin moiety. The limit of detection of the PCR-ELISA was 100-300 fg (40-120 bacterial cells) for C. jejuni and C. coli with their respective species-specific oligonucleotide probes and 10 fg (4 bacterial cells) with the Campylobacter genus-specific probe. Testing of poultry samples, which were presumptive positive for Campylobacter following culture on the Malthus V analyzer, with the PCR-ELISA determined Campylobacter to be present in 100% of samples (n = 40) with mixed cultures of C. jejuni/C. coli in 55%. The PCR-ELISA when combined with culture pre-enrichment is able to detect the presence of Campylobacter and definitively identify C. jejuni and C. coli in culture-enriched poultry meat samples.  相似文献   

16.
17.
A PCR assay has been developed for the detection of Campylobacter jejuni and Camp. coli in water samples. The sample is filtered through a membrane which is subjected to sonication to release the impacted cells. After removal of the filter from the cell suspension and a freeze/thaw cell lysis step, a semi-nested PCR is carried out on the filtrate using the primers CF02, CF03 and CF04 ( Camp. jejuni fla and flaB gene sequences). Incorporation of a sonication stage allows removal of the filter membrane since they have been shown to inhibit the PCR. In experiments with spiked water samples (20 ml) a theoretical sensitivity of 10–20 Campylobacter cells ml-1 was achieved. Using a sample volume of 100 ml this sensitivity can be increased to approximately 2 Campylobacter cells ml-1.  相似文献   

18.
Campylobacter jejuni is the most common cause of bacterial gastroenteritis in Luxembourg, with a marked seasonal peak during summer. The majority of these infections are thought to be sporadic, and the relative contribution of potential sources and reservoirs is still poorly understood. We monitored human cases from June to September 2006 (n = 124) by molecular characterization of isolates with the aim of rapidly detecting temporally related cases. In addition, isolates from poultry meat (n = 36) and cattle cecal contents (n = 48) were genotyped for comparison and identification of common clusters between veterinary and human C. jejuni populations. A total of 208 isolates were typed by sequencing the fla short variable region, macrorestriction analysis resolved by pulsed-field gel electrophoresis (PFGE), and multilocus sequence typing (MLST). We observed a high diversity of human strains during a given summer season. Poultry and human isolates had a higher diversity of sequence types than isolates of bovine origin, for which clonal complexes CC21 (41.6%) and CC61 (18.7%) were predominant. CC21 was also the most common complex found among human isolates (21.8%). The substantial concordance between PFGE and MLST results for this last group of strains suggests that they are clonally related. Our study indicates that while poultry remains an important source, cattle could be an underestimated reservoir of human C. jejuni cases. Transmission mechanisms of cattle-specific strains warrant further investigation.  相似文献   

19.
Six Campylobacter jejuni and six Campylobacter coli strains were isolated from cows and pigs, and their survival in lake water was compared by viable counts. Campylobacter jejuni survived longer in culturable form than C. coli in untreated and membrane-filtered water both at 4 and 20 degrees C. This difference in survival time may be a reason why C. jejuni is generally isolated from surface waters more frequently than C. coli. Both species survived better in filtered than in untreated water. This suggests that predation and competition for nutrients affect the survival of both Campylobacter species in the aquatic environment.  相似文献   

20.
Campylobacter jejuni was inoculated into a range of raw and cooked foods and survival determined during storage at 20°, 10° and 20°C for up to 56 d. To facilitate easy enumeration, two antibiotic-resistant strains of Camp. jejuni , which had similar survival characteristics to the parent strain, were used. Campylobacter jejuni survived for longer at lower temperatures in all foods and inactivation was most rapid in pâté. There was generally good agreement between the survival data and predictions from a Camp. jejuni survival model (Food MicroModel).  相似文献   

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