The importance of phylogenetic scale in tests of Bergmann's and Rapoport's rules: lessons from a clade of South American lizards

We tested for the occurrence of Bergmann's rule, the pattern of increasing body size with latitude, and Rapoport's rule, the positive relationship between geographical range size and latitude, in 34 lineages of Liolaemus lizards that occupy arid regions of the Andean foothills. We tested the climatic-variability hypothesis (CVH) by examining the relationship between thermal tolerance breadth and distribution. Each of these analyses was performed varying the level of phylogenetic inclusiveness. Bergmann's rule and the CVH were supported, but Rapoport's rule was not. More variance in the data for Bergmann's rule and the CVH was explained using species belonging to the L. boulengeri series rather than all species, and inclusion of multiple outgroups tended to obscure these macroecological patterns. Evidence for Bergmann's rule and the predicted patterns from the CVH remained after application of phylogenetic comparative methods, indicating a greater role of ecological processes rather than phylogeny in shaping the current species distributions of these lizards.     

Climatic governance of the latitudinal cline in seasonality of freshwater phytoplankton production

Data on the intra-annual variation in phytoplankton production for 114 southern and northern hemisphere lakes (42°S to 75° N) were combined to examine broad-scale latitudinal trends. Much of the seasonal variation in production can be statistically explained through the climatic factors of mean annual range of atmospheric temperature and annual variance in incident solar radiation, of which the amplitude of both increases with distance from the equator. Quantification of this latitudinal-climatic trend is an important step in understanding the hierarchial regulation of variability in lake trophic dynamics.     

Historical biogeography and evolutionary diversification of Lilium(Liliaceae): New insights from plastome phylogenomicsOA

Here, we infer the historical biogeography and evolutionary diversification of the genus Lilium. For this purpose, we used the complete plastomes of 64 currently accepted species in the genus Lilium(14plastomes were newly sequenced) to recover the phylogenetic backbone of the genus and a timecalibrated phylogenetic framework to estimate biogeographical history scenarios and evolutionary diversification rates of Lilium. Our results suggest that ancient climatic changes and geological tectonic act...     

Historic variability in fire‐generated landscape heterogeneity of subalpine forests in the Canadian Rockies

Question: This study evaluates historical changes in landscape structure and heterogeneity in subalpine forests. We use response to severe fires in 2001 and 2003, along with historical reconstructions to examine crown‐fire effects on landscape heterogeneity and to assess, comparatively, effects of fire exclusion management in the 20th century. Location: Subalpine forests of Kootenay National Park (KNP), Canadian Rockies. Methods: Using a landscape‐level model based on a fire‐origin stand age map, we reconstructed decadal burned areas within the landscape for 1750‐2000 (forming reconstructed landscapes). Landscape pattern was analysed for each reconstructed landscape map, and we compared landscape pattern indices (total area, number of patches, mean patch area, patch area variation, largest patch index, edge density, perimeter–area ratio, landscape shape index) with those in 2005 after recent large fires. Results: After large fires in 1926, connectivity of the KNP landscape increased and its diversity was quite low. After 2001 and 2003 fires, the post‐fire landscape of 2005 was highly heterogeneous in terms of size, variation, edge density and perimeter–area ratio of the remnant forest patches. Since the decline in occurrence of large fires after 1926 reflected a period of wet weather, fuel build‐up resulting from landscape homogenization within the 20th century landscape could not be attributed solely to fire exclusion. This period without fires greatly enhanced connectivity of late‐successional forests that finally burned in 2001/2003, but connectivity was within the historical range for these forests. The gradual increase in stand connectivity before recent large fires may indicate that fire exclusion was less responsible than often believed for fuel build‐up in these fire‐susceptible older forests. Conclusions: The large fires at the beginning of the 21st century are within the natural range of disturbances for this landscape, and do not stand out as “human‐induced disasters” in their effects on landscape patterns. Such stochastic large disturbances contribute to maintenance of highly heterogeneous landscape structure, which is important for many taxa and natural ecological processes. Identifying future probability of such large disturbances and their ecological roles should be incorporated into management of these dynamic, disturbance‐prone systems.     

WHY ARE CLUTCH SIZES MORE VARIABLE IN SOME SPECIES THAN IN OTHERS?

Animal species differ in the variability of their clutch sizes, as well as in mean clutch sizes. This phenomenon is particularly obvious in lizards, where virtually invariant clutch sizes have evolved independently in at least 23 lineages in seven families. Reduced variance in clutch size may arise either as an adaptation (because females with less variable clutch sizes have higher fitness) or as an indirect by-product of selection on other life-history characteristics. Comparative data on Australian scincid lizards indicate that variance in clutch sizes is lowest among species with low mean clutch sizes, small body sizes and a low variance in body sizes of adult females. Phylogenetic analysis shows that evolutionary decreases in the variance of clutch size have accompanied decreases in mean clutch sizes and decreases in the variance of adult female body sizes. Tropical lizards may also exhibit lower variance in clutch size. Most of these characteristics are correlated in occurrence, and may be allometrically tied to small body size. Hence, low variance in clutch size may be a consequence of allometric effects on a correlated suite of life-history characteristics. Exceptions to the general patterns noted above—especially, lizard species with invariant clutch sizes but large body sizes—may be due to loss of genetic variance for clutch sizes in lineages that have passed through a “bottleneck” of small body sizes and hence, low variance in clutch sizes.     

Empirical methodology for predicting changes in species range extension and richness associated with climate warming

Species richness and extent of geographical range for North American freshwater amphipods and crayfish are strongly correlated with mean annual absolute, or range of, temperature, respectively. Such spatially based relationships are shown to be useful for predicting the biological consequences arising through scenarios of temporal climate warming.     

Does daily climate variation have an effect on species’ elevational range size?

In their recent paper published in Science (2016, 351 , 1437–1439), Chan et al. analysed 137 montane gradients, concluding that they found a novel pattern—a negative relationship between mean elevational range size of species and daily temperature variation, which was claimed as empirical evidence for a novel macrophysiological principle (Gilchrist's hypothesis). This intriguing possibility was their key conceptual contribution. Unfortunately, as we show, the empirical evidence was flawed because of errors in the analyses and substantial sampling bias in the data. First, we re‐ran their analyses using their data, finding that their model should have been rejected. Second, we performed two additional re‐analyses of their data, addressing biases and pseudoreplication in different ways, both times again rejecting the evidence claimed to support Gilchrist's hypothesis. These results overturn the key empirical findings of Chan et al.'s study. Therefore, the “macrophysiological principle” should be regarded as currently remaining unsupported by empirical evidence.     

饥饿对甲壳动物生理生态学影响的研究进展

作为一种主要的环境胁迫因子,饥饿对甲壳动物生理生态学的影响极其广泛。本文概述了饥饿对甲壳动物发育与存活、代谢、消化腺结构与消化酶、机体化学组成以及恢复生长方面的影响。在此基础上,提出了今后两个主要研究方向,即补偿生长及其生理学机制、饥饿与抗病免疫力之间关系的研究。     

Environmental pH as an important factor for the distribution of urease positive ammonia-oxidizing bacteria

The effect of pH on ureolytic activity of a number of chemolithotrophic ammonia-oxidizing bacteria (AOB) has been studied in context with distribution patterns of these species. The pH-optima for urea-based nitrification were found to differ clearly among the examined species. Pronounced optima ranged between pH 5.0 and 8.0. Urease is an intracytoplasmic enzyme and should therefore be independent of the external pH. Our first results indicated the presence of a pH-dependent uptake system for urea. Simultaneous oxidation of free ammonia, possible only at high pH values, led to a strong intensification of ureolysis. The lag-phase of growth on urea as the sole energy source was clearly prolonged compared to free ammonia. Our results point on the existence of an active, most likely energy-linked urea-uptake system in addition to a possible passive diffusion of urea. The different pH-optima of urea-uptake agree with known distribution patterns of distinct AOB. It might be a reason for the shift of dominant Nitrosospira populations along pH gradients in acid soils as observed by others in molecular analyses of natural AOB populations.