The leucine operon carrying theleu-500 promoter mutation is expressed under anaerobic conditions

TheSalmonella typhimurium leu-500 auxotrophic mutant grew when cultivated in minimal medium anaerobically, but not aerobically. This mutant carries an AT CG mutation in the Pribnow box of the promoter region of the leucine operon and was found to be suppressible by anaerobic conditions. Analysis of the anaerobic gases revealed that hydrogen in the anaerobic gas mixture (85% N₂, 10% CO₂, 5% H₂) is essential for the suppression of theleu-500 mutation. Whenleu-500 mutant cells were incubated in the presence of the hydrogen gas, the synthetic rates for the first and last gene products of theleu-500 operon were similar to those of the wild-type cells. It was concluded that the entire leucine operon was efficiently expressed inleu-500 when the cells were grown under the hydrogen gas-containing anaerobic environment. Thus, theleu-500 promoter mutant is a model system for regulation of gene expression by a specific atmospheric environment, i.e., hydrogen gas found in the anaerobic environment.     

Linkage relationships of biochemical markers to Q- and C-band variants in a large black kindred

Summary Lod scores are reported for 86 biochemical to cytogenetic marker comparisons in a Black kindred. Analysis with unconfirmed locus assignments resulted in 12 exclusions of close linkage.This paper is based on a thesis submitted by the senior author in partial fulfillment of the Ph.D. degree at North Carolina State University, Raleigh.Research supported by the National Heart and Lung Institute Grant HLO-3341, National Institute of Mental Health Grant MH 26621, and National Institute of General Medical Sciences Grant GN 16697; paper number 6281 of the Journal Series of the North Carolina Agricultural Research Service, Raleigh, North Carolina.     

Mapping of nucleoside phosphorylase (Np-1) and esterase 10 (Es-10) on mouse chromosome 14

A method for detecting two alleles at Np-1 (nucleoside phosphorylase) and three alleles at Es-10 (esterase 10) from mouse blood by cellulose acetate electrophoresis is described. The allelic constitution at these loci for 44 inbred strains and stocks was determined. The location of Np-1 on chromosome 14 was established by backcross experiments in which alleles at Np-1 and Robertsonian translocations were segregating. Es-10 was shown to be linked to Np-1, and the following genetic map of Chr 14 was constructed: centromere-(8.9±4.0 cM)-[Np-1, Wc]-(10.2±1.9 cM)-Es-10-(15.5±3.7 cM)-s. The homologous human loci, NP and ES-D, are not linked.This work was supported by Contract E(11-1)-3267 with the Energy Research and Development Administration, by Contracts NO1-ES4-2156 and NO1-ES4-2159 with the National Institute of Environmental Health Sciences, and by Grants GM 19656 and GM 20919 from the National Institute of General Medical Sciences. D. A. K. was a participant in the 1975 Summer Program for College, Graduate, and Medical Students, which was supported, in part, by the Clark Foundation. The Jackson Laboratory is fully accredited by the American Association for Accreditation of Laboratory Animal Care.     

Evolution of mammalian carbonic anhydrase loci by tandem duplication: Close linkage of Car-1 and Car-2 to the centromere region of chromosome 3 of the mouse

Electrophoretic variants of two carbonic anhydrase enzymes, CAR-1 (CA I) and CAR-2 (CA II), have been found in the laboratory mouse, Mus musculus. These two loci are closely linked to each other and are located on chromosome 3 near its centromere. The close linkage of Car-1 and Car-2 supports the hypothesis that the present-day carbonic anhydrase loci are the result of tandem duplication of an earlier carbonic anhydrase locus with subsequent divergence. The red blood cells of mice of the subspecies M. m. casteneus have significantly reduced levels of CAR-1 and CAR-2.This research was supported in part by Research Grants GM-20919 from the National Institute of General Medical Sciences and CA-01074 from the National Cancer Institute, and by Contracts E(11-1)-3267 with the Energy Research and Development Administration and NO1-ES-4-2159 with the National Institute of Environmental Health Sciences. The Jackson Laboratory is fully certified by the American Association for Accreditation of Laboratory Animal Care.     

Technology advancement for studying gene expression and gene function: a workshop report

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Technology advancement for studying gene expression and gene function: a workshop reportSponsored by National Institute of Child Health and Human Development, National Institute of General Medical Sciences, National Center for Human Genome Research, National Center for Research Resources, National Institutes of Health, Bethesda, Maryland 20892, USA     

Mutation and “Reversion” at the leu-5 locus of Neurospora and its effect on the cytoplasmic and mitochondrial leucyl-tRNA synthetases

The Neurospora mitochondrial and cytoplasmic leucyl-tRNA synthetases differ from each other not only in location but also with respect to tRNA specificity, chromatographic mobility, leucine affinity, and sensitivity to phosphate inhibition. Strain 45208t, which bears a mutation in the leu-5 cistron, produces a cytoplasmic enzyme with reduced affinity for leucine and little if any mitochondrial enzyme activity. Reversion of the 45208t mutation was found to result not only in the reappearance of mitochondrial leucyl-tRNA synthetase activity but also in the production of a cytoplasmic synthetase with an affinity for leucine intermediate between mutant and wild type. The reversion studied, then, did not involve a return to the wild-type nucleotide sequence in the leu-5 cistron. The results obtained lend further support to the conclusion that the leu-5 cistron is involved in specifying, at least in part, the structure of both the cytoplasmic and mitochondrial leucyl-tRNA synthetases, despite the physical and functional differences between them.Research was supported in part by National Science Foundation Grant 27575.     

Theory of hemoglobin facilitated oxygen transport

The transport of oxygen in a hemoglobin-saturated medium is theoretically investigated using classical transport theory. It is found that all the chemical complexes can be expressed as a single function of oxygen pressure. A potential difference together with apH shift is predicted to occur across the medium. This research was supported by the United States Public Health Service Training Grant No. 5-T1-GM-833 from the National Institute of General Medical Sciences. This research was supported by a United States Public Health Service Research Career Program Award 5-K6-GM-18,420 from the National Institute of General Medical Sciences.     

Chromosomal location of soluble glutamic-pyruvic transaminase-1 (Gpt-1) in the mouse

Three alleles at the Gpt-1 (glutamic-pyruvic transaminase-1) locus in the mouse, as identified by electrophoresis on cellulose acetate, and their distribution among inbred mouse strains and wild stocks are described. The Gpt-1 locus was shown to control the soluble form of the enzyme. Three-point linkage analysis established the location of Gpt-1 on chromosome 15 between uw and bt. In addition, a new staining procedure is described that allows the visualization of GPT activity on gels by the deposition of formazan. This is an improvement over previous methods that produced bands of nonfluorescence against a fluorescent background.This investigation was supported in part by Research Grant GM 20919 from the National Institute of General Medical Sciences, and by contract NO1-ES-4-2159 with the National Institute of Environmental Health Sciences. The Jackson Laboratory is fully accredited by the American Association for Accreditation of Laboratory Animal Care.     

Ectopic pairing and evolution of 5S ribosomal RNA genes in the chromosomes of Drosophila funebris

5S ribosomal RNA from Drosophila melanogaster labeled with ¹²⁵I was used to locate the 5S rRNA genes in chromosomes of D. funebris by means of in situ hybridization. Silver grains were observed at three distinct sites, one of which was a recognized reverse repeat. Only one half of the reverse repeat, however, hybridizes with 5S rRNA and the significance of this phenomenon is discussed. A case of ectopic pairing between two different 5S sites in the genome is reported, and the significance of ectopic pairing is considered.The author was a Predoctoral Fellow supported by Grant GM 1974 from the National Institute of General Medical Sciences, National Institutes of Health.Contribution from Oak Ridge National Laboratory, operated by the Union Carbide Corporation for the U.S. Energy Research and Development Administration.     

A new RNA synthesis mutant of E. coli

A temperature-sensitive mutant of E. coli is described. At the nonpermissive temperature, the capacity for RNA and protein synthesis decreases logarithmically in the mutant. The mutant is unable to support the growth of f2 or T7 virus, even at the permissive temperature. The temperature-sensitive mutation maps approximately 1 away from rif ^r in E. coli and therefore affects a gene previously undescribed. The temperature sensitivity is suppressed by sublethal concentrations of rifampicin. Moreover, in rif ^r T^s double mutants, the T ^s mutation suppresses rif ^r and vice versa. The partially purified RNA polymerases from mutant and wild-type cells have different temperature and salt optima.This research was supported by Public Health Service grant GM-14368 from the National Institute of General Medical Sciences and by grant IN-29 from the American Cancer Society. One of us (D.P.) is a predoctoral trainee, supported by a National Science Foundation Graduate Traineeship Program and by a National Institutes of Health Predoctoral Research Fellowship. S. Marshall is supported by LASBAU.     

The role of the Golgi complex in the formation of secretion in the test cells of the follicle of the tunicate,Ciona

Summary Electron microscope studies were made on the test cells which comprise a part of the follicular envelope in the ovary of the tunicate Ciona. During development the cells become filled with secretory granules. The Golgi complex is well developed and usually centrally located in the cells. The morphological variations shown and described strongly suggest that the Golgi complex is mainly concerned with the origin of the secretion in these cells.Supported by research grants (GM-9229, 9230) from the National Institute of General Medical Science, United States Public Health Service.This investigation was supported by a Public Health Service Research Career Program Award (1-K3-GM-11, 524) from the National Institute of General Medical Sciences.     

孕烷X受体配体结合结构域蛋白晶体的X线衍射结构解析

目的:利用X线衍射技术解析孕烷X受体(PXR)配体结合结构域(LBD)蛋白晶体的3维结构。方法:对PXR蛋白LBD(130~434氨基酸残基)序列进行密码子优化并化学合成后克隆至pRSFDuet-1表达载体,再将载体导入大肠杆菌BL21(DE3),对PXR-LBD蛋白进行原核表达与分离纯化;采用晶体筛选试剂盒筛选蛋白结晶条件,采用悬滴法获得目标蛋白的晶体;对获得的蛋白晶体进行X线晶体衍射检测,并收集相关数据建立PXR-LBD的三维结构。结果:获得了PXR-LBD的高质量晶体并利用X线衍射解析了该蛋白质晶体的结构数据,使用Phenix.refine软件和COOT软件等对结构进行修正,最终获得了高分辨率的3维结构数据。结论:完成了孕烷X受体配体结合结构域蛋白晶体的X线衍射结构解析,为研究和开发PXR相关药物奠定了基础。     

Evidence for an Altered Operator Specificity: Catabolite Repression Control of the Leucine Operon in Salmonella typhimurium

A mutation, GD-1, in the leucine operon imposed unusual growth characteristics upon a leucine auxotrophic strain bearing the leucine operator mutation, leu-500. The strain with the GD-1 mutation was able to grow on a minimal salts medium when citrate was the sole carbon source, but required leucine when glucose was present. Tests with a large number of carbohydrates suggest that in the strain bearing the GD-1 mutation the leucine biosynthetic enzymes are under catabolite repressor control. Recombination studies indicate that the GD-1 mutation is a secondary alteration of the leucine operator at or very close to the site of the leu-500 mutation. Mutations at the supX locus (previously termed su leu 500 and located on the chromosome between the cysteine B and tryptophan gene clusters) result in elimination of the catabolite repression effect. The data are interpreted as an indication that the GD-1 and leu-500 mutations alter the leucine operator with respect to its specificity of response to repressors.     

Fine structure of the Wolffian duct and cytodifferentiation of the epididymis in fetal rats

Summary The fine structure of the Wolffian duct and alterations that occur with the differentiation of the epididymis have been studied in fetal rats ranging in length from 5 to 22 mm (12 to 19 days gestation). Contents of the columnar Wolffian duct cells include basal and perinuclear granular endoplasmic reticulum, sparse apical agranular endoplasmic reticulum, elongate mitochondria, and a small Golgi complex. Large membrane-bounded dense bodies contain cellular organelles and may represent parts of degenerating cells ingested by phagocytosis. During the development of the epididymis from the Wolffian duct in older fetuses, intracytoplasmic confronting cisternae of the granular endoplasmic reticulum become numerous, and the agranular reticulum in the apical part of the cell increases moderately in abundance. Concomitantly, the apical cell surface is modified. Many microvilli are formed, indentations of the plasma membrane appear between the microvilli, and the number of coated vesicles in the apical cytoplasm increases. These changes closely follow the onset of androgen secretion by the fetal testis, and it is suggested that they may occur in response to androgen. The relation of these differentiations to known adult functions of the epididymis is discussed.This study was supported by a research grant from the American Cancer Society (E-500), Program Project HD-02282 of the National Institutes of Health, and Health Sciences Advancement Award FR-02084 from the National Institutes of Health. The author is the recipient of a Research Career Development Award from the National Institute of General Medical Sciences. He wishes to acknowledge the technical assistance of Mrs. Heather Taylor.     

Frontiers in glycomics; bioinformatics and biomarkers in disease. September 11-13, 2006 Natcher Conference Center, NIH Campus, Bethesda, MD, USA

This is a short summary of a meeting entitled "The Frontiers in Glycomics; Bioinformatics and Biomarkers in Disease" which was jointly organized by the NIH Consortium for Functional Glycomics (CFG), Human Disease Glycomics/Proteome Initiative (HGPI), National Cancer Institute, National Institute of General Medical Sciences, Japan Society for the Promotion of Science and National Center for Research Resources held at the NIH Campus, Bethesda, MD, Natcher Conference Center in September 11-13, 2006.     

Use of exhaustive nucleic acid hybridization for determining the amount and size distribution of newly synthesized bacterial message RNA

An RNA-DNA hybridization method is described for determining the fraction of a radioisotopically labeled RNA preparation isolated from bacteria that is message RNA. Experiments are performed under conditions where over 95% of the input RNA is converted to an RNA-DNA complex. Competitive hybridization methods are described that partition the RNA-DNA hybrids into ribosomal RNA-DNA and nonribosomal RNA-DNA hybrids. Evidence is presented that the competition is specific. Message RNA radioactivity was assumed to be RNA radioactivity not competed by ribosomal RNA and transfer RNA. The fraction of RNA made at a given instant under balanced growth conditions (30 C, in minimal medium), that is, message RNA, was determined to be 65%. The method was also used to measure the size distribution of newly synthesized mRNA in Escherichia coli. That size was found to average 3–8 × 10⁵ daltons.This research was supported by grant GM-14368 from the Institute of General Medical Sciences, National Institutes of Health. Two of the authors (D. P. and A. J.) were supported by predoctoral fellowships from the National Institute of General Medical Sciences.     

Spread and control of mycoplasmal infection of cell cultures

Summary Environmental sampling was performed during trypsinization and passage of 3T-6 cell cultures that contained a mean of 4.3×10⁷ colony forming units (CFU) per ml supernatant ofA. laidlawii. The lip of the culture flask and the outside of the used pipet were always heavily contaminated. The outside of the culture flask (3/7), the work surface (8/12) and the outside of a pan of disinfectant (4/5) were regularly contaminated with mycoplasmas. Airborne mycoplasmas were detected eight of 32 times (25%) by settling plates; simultaneous forced-air samplers by two different methods were always negative. The technician’s hands were contaminated two of 15 samples. When hands were contaminated, more contamination was detected in the environment. Droplets ofA. laidlawii andM. orale inoculated onto work surfaces survived drying for a minimum of 3 days, even in laminar airflow cabinets. Twenty-five of 31 (80.6%) cell culture technicians carriedM. salivarium in their throats; only two carriedM. orale. It is concluded that mycoplasma-infected cultures are the most common source of further infection. Recommendations for prevention and control of mycoplasmal infection are listed. These studies were supported in part by Contract No. 1-GM-2112 from the National Institute of General Medical Sciences, Contract No. 1-CB-23868 from the National Cancer Institute, General Research Support Grant 5-S01-RRO5582 from Research Resources, National Institutes of Health, and by a Grant-in-Aid from the State of New Jersey.     

Regulation of gene function: A comparison of enzyme activity levels in relation to gene dosage in diploids and triploids of Drosophila melanogaster

A study of gene activity in diploid and triploid Drosophila melanogaster females has been performed. Levels of enzyme activity of X-linked glucose 6-phosphate and 6-phosphogluconate dehydrogenases and autosome-linked -glycerophosphate and NADP-dependent isocitrate dehydrogenases were measured and correlated with DNA content, in crude extracts of whole flies or thoraces. The results show that the contribution of each dose of a given gene to the level of enzyme activity is equal in diploid and triploid cells. These findings are discussed in the context of the phenomenon of dosage compensation.This investigation was supported by Research Grant GM-15691 and Genetics Training Grant 2 T1-GM-685 of the National Institutes of Health.Recipient of a Research Career Development Award (K4-GM-13, 277) from the National Institute of General Medical Sciences.     

Linkage relationships of Lp and Ag serum lipoproteins with 25 polymorphic markers

Summary Linkage relations of Lp and Ag serum lipoproteins with 25 polymorphic marker systems are examined in a large kindred of over 100 persons. The results indicate that Lp and ESD are probably closely linked and so the Lp locus may also be assigned to chromosome 13. No significant linkage is detected between Ag and the other marker systems.This research was supported by: a Public Health Service Research Career Development Award (1-K3-GM-31, 732) and research grant (GM 16697) from the National Institute of General Medical Sciences.