Tunable Extraordinary THz Transmission Using Liquid Metal-Based Devices

In this paper, we report novel designs of tunable THz plasmonic devices based on liquid metals. The designed devices will be able to dynamically control and change the spectrum responses of extraordinary THz wave transmissions. Different THz device configurations are investigated, and numerical simulations have been conducted to theoretically verify the performance of the proposed structures. Moreover, an equivalent circuit model has been developed to describe the operating principle of the proposed THz devices. Good agreement has been achieved between the theoretical models and the numerical results. These new THz devices are expected to be applied in various areas of sensing, communication, and imaging.     

Tunable Extraordinary Optical Transmission in a Metal Film Perforated with Two-Level Subwavelength Cylindrical Holes

We propose a novel plasmonic metal structure composed of a silver film perforated with a two-dimensional square array of two-level cylindrical holes on a silica substrate. The transmission properties of this structure are theoretically calculated by the finite-difference time-domain (FDTD) method. Double-enhanced transmission peaks are achieved in the visible and infrared regions, which mainly originate from the excitation of localized surface plasmon resonances (LSPRs), the hybridization of plasmon modes, and the optical cavity mode formed in the holes. The enhanced transmission behaviors can be effectively tailored by changing the geometrical parameters and dielectric materials filled in the holes. These findings indicate that our proposed structure has potential applications in highly integrated optoelectronic devices.     

Optical Curtain Effect: Extraordinary Optical Transmission Enhanced by Antireflection

In this paper, we employ an antireflective coating which comprises inverted π-shaped metallic grooves to manipulate the behaviour of a transverse-magnetic (TM)-polarised plane wave transmitted through a periodic nanoslit array. At normal incidence, such scheme cannot only retain the optical curtain effect in the output region but also generate the extraordinary transmission of light through the nanoslits with the total transmission efficiency as high as 90 %. Besides, we show that the spatially invariant field distribution in the output region as well as the field distribution of resonant modes around the inverted π-shaped grooves can be reproduced immaculately when the system is excited by an array of point sources beneath the inverted π-shaped grooves. Furthermore, we investigate the influence of centre groove and side-corners of the inverted π-shaped grooves on suppressing the reflection of light, respectively. Based on our work, it shows promising potential in applications of enhancing the extraction efficiency as well as controlling the beaming pattern of light emitting diodes.     

Polarization Management of Terahertz Extraordinary Optical Transmission through Ultracompact L-Shaped Subwavelength Patterns on Metal Films

Compact and efficient terahertz (THz) polarization conversion components are of importance for applications where the small dimension of the laser device/system is critical. Here, we propose an ultracompact L-shaped subwavelength patterns on metal films to realize the THz polarization management. By optimizing the geometric parameters of single-layered and double-layered patterns, the linear-polarized THz incidence can be converted to elliptical polarized output or rotated by 90° efficiently due to the THz extraordinary optical transmission phenomenon. The physical mechanism is explored by mode analysis using numerical and analytical modeling.     

Plasmon Resonances in a Periodic Square Coaxial Hole Array in a Graphene Sheet

Plasmonics - We present a computational study of the plasmon resonances in a periodic square coaxial hole array in a graphene sheet, which consists of a square hole array and a square strip array....     

Spatiotemporal Variation of Mistletoes: a Dynamic Modeling Approach

Mistletoes are common aerial stem-parasites and their seeds are dispersed by fruit-eating birds. In the mutually beneficial relationships between mistletoes and bird species that disperse mistletoes’ seeds, the preference of birds for infected trees influences the spread of mistletoes and the spatiotemporal pattern formation of mistletoes. We formulate a deterministic model to describe the dynamics of mistletoes in an isolated patch containing an arbitrary number of trees. We establish concrete criterions, expressed in terms of the model parameters, for mistletoes establishing in this area. We conduct numerical simulations based on a field study to reinforce and expand our results.     

Tunable Plasmon-Induced Transparency of Double Continuous Metal Films Sandwiched with a Plasmonic Array

Making a continuous metal film with near-unity transparency has received more and more attention in recent years because of its potential applications for various optoelectronic devices. Here, we theoretically show that a high tunable plasmon-induced transparency metal film structure can be performed by double continuous metal films inserted with a two-dimensional hexagonal lattice array of plasmonic nanopariticles. The proposed structure shows near-unity anti-reflection and intensively enhanced transmission via the cooperative effects of strong resonant near-field light input and output coupling by the plasmonic array and the excitation of surface electromagnetic waves of the metal films. The optical response can be efficiently mediated by varying the sizes of nanoparticles and the separated distance between the metal array and the metal films. With the merits of high transparency, sub-wavelength sizes and wholly retained metal characteristics including high conductivity via using the pure metallic materials, the structure proposed here suggests various potential applications in optoelectronic integrated circuits.     

Diffusion through a membrane: Approach to equilibrium

The transfer of solute through a membrane separating two aqueous solutions is studied with the time-dependent diffusion equation for composite media. By introducing new independent and dependent variables it is shown that the differential equations and boundary conditions can be transformed into a dimensionless form which does not explicitly depend on the diffusivities of the media. Laplace transforms are used to derive explicit solutions for the solute concentration as a function of position and time. It is shown that at large time the concentration approaches the equilibrium distribution exponentially. Explicit results are given for the decay time as a function of the parameters of the system. In addition, an accurate and simplified expression is derived for the decay time for the case of small membrane permeability. The accuracy of the analytic solutions for the concentration profiles is tested by comparing them with numerical results obtained by solving the diffusion equations by the method of finite differences. Excellent agreement is found. Research supported in part by a grant from the National Science Foundation.     

Mathematical Modeling of Learning from an Inconsistent Source: A Nonlinear Approach

Continuing the discussion of how children can modify and regularize linguistic inputs from adults, we present a new interpretation of existing algorithms to model and investigate the process of a learner learning from an inconsistent source. On the basis of this approach is a (possibly nonlinear) function (the update function) that relates the current state of the learner with an increment that it receives upon processing the source’s input, in a sequence of updates. The model can be considered a nonlinear generalization of the classic Bush–Mosteller algorithm. Our model allows us to analyze and present a theoretical explanation of a frequency boosting property, whereby the learner surpasses the fluency of the source by increasing the frequency of the most common input. We derive analytical expressions for the frequency of the learner, and also identify a class of update functions that exhibit frequency boosting. Applications to the Feature-Label-Order effect in learning are presented.     

Microbial Metabolism as an Evolutionary Response: The Cybernetic Approach to Modeling

ABSTRACT:?

The growth and metabolic capabilities of microorganisms depend on their interactions with the culture medium. Many media contain two or more key substrates, and an organism may have different preferences for the components. Microorganisms adjust their preferences according to the prevailing conditions so as to favor their own survival. Cybernetic modeling describes this evolutionary strategy by defining a goal that an organism tries to attain optimally at all times. The goal is often, but not always, maximization of growth, and it may require the cells to manipulate their metabolic processes in response to changing environmental conditions.

The cybernetic approach overcomes some of the limitations of metabolic control analysis (MCA), but it does not substitute MCA. Here we review the development of the cybernetic modeling of microbial metabolism, how it may be combined with MCA, and what improvements are needed to make it a viable technique for industrial fermentation processes.

IMTECH communication no.001/2001     

Modeling of Electron Hole Transport within a Small Ribosomal Subunit

Russian Journal of Bioorganic Chemistry - Synchronized operation of various parts of the ribosome during protein synthesis implies the presence of a coordinating pathway, however, this is still...     

Modeling tree water flow as an unsaturated flow through a porous medium

The electric circuit analogy has had a profound influence on how tree physiologists measure, model and think about tree water flow. For example, previous models that attempt to account for changes in saturation use the electric circuit analogy to define capacitance as the change in saturation per change in pressure. Given that capacitance is constant, this relationship implies that subjecting a block of wood to a pressure of -2.5 MPa for 2 min results in the same change in saturation as subjecting the same block to the same pressure for 2 days. Given the definition of capacitance, it is unclear how the electric circuit analogy could be used to predict changes in saturation separately from changes in pressure. The inadequacies in the electric circuit analogy discussed in this paper necessitate a new theory of tree water flow that recognizes the sapwood as being a porous medium and explicitly deals with the full implications of the unsaturated flow occurring in the sapwood. The theory proposed in this paper combines the Cohesion theory with a mathematical theory of multiphase flow through porous media. Based on this theory, both saturated and unsaturated tree water flow models are presented. Previous partial differential equation models of tree water flow based on the electric circuit analogy are shown to be mathematically equivalent to the model of saturated porous flow. The unsaturated model of tree water flow explicitly models the pressure profile and the rates of change in saturation and specific interfacial area (a measure of how the water in the unsaturated sapwood is partitioned between mobile and immobile components). The unsaturated model highlights the differences between saturated and unsaturated flow and the need to measure the variables governing tree water flow at higher spatial and temporal resolutions.     

Landscape-Level Phenology of a Threatened Butterfly: A GIS-Based Modeling Approach

Phenology of organismal development varies between growing seasons according to the weather and also varies within growing seasons across topoclimatic gradients. Combining these factors is necessary to predict landscape-level patterns of phenology and their consequences for population dynamics. We developed a model on a Geographic Information System (GIS) that predicts phenology of adult emergence of the threatened Bay checkerspot butterfly across complex terrain under variable weather. Physiological time was modeled by accumulated slope-specific direct insolation. Insolation sums through growing seasons were calculated for each cell of a digital terrain model (skipping over cloudy days) until a threshold for adult emergence was reached. Emergence times of adult butterflies for a given year were then mapped out across a 100-ha area. To generate predicted emergence curves for the population in a given year, these maps ofemergence times were then modified by incorporating microdistributions of postdiapause larvae. Different larval microdistributions changed both the magnitude and shape of emergence curves under the same yearly weather and could change mean population-wide emergence dates by 11 days. Reproductive success in this butterfly is strongly dependent on the timing of adult emergence, and these models provide insights into the effects of weather, topography, and population history on population dynamics. Because adult emergence phenology is often a key component of reproductive success for insects, understanding the components of phenological variation in space and time in complex terrain may provide insights into population dynamics for management of pests and conservation of rare species. Received 2 December 1997; accepted 24 March 1998.     

Wave Transmission through an Assembly of Randomly Branching Elastic Tubes

Calculations are presented of the transmission of oscillations through an assembly of randomly branching elastic tubes, as a model of not only the major arteries, but also a peripheral vascular bed. It appears that the viscosity of the arterial wall must be the major source of attenuation in the larger arteries, while the viscosity of the blood plays a significant role only in the smaller vessels. In all situations, variations of cross-sectional area have a considerable effect on wave transmission, causing a general decrease in amplitude and an accentuation of reflection from the terminations. The effects of variation in cross-sectional area are sufficiently great to indicate that they should be included in future models of the arterial system. Finally, it is argued that because of the presence of random branching and elastic nonuniformity, the determination of the reflection coefficient for a system such as the arterial tree may be quite misleading.     

Effect of Boundary Condition and Periodical Extension on Transmission Characteristics of Terahertz Filters with Periodical Hole Array Structure Fabricated on Aluminum Slab

Terahertz (THz) filters based on extraordinary optical transmission from periodical hole array structures fabricated on aluminum slab have been experimentally investigated by using THz time-domain spectroscopy. The incident THz pulses with frequency from 0.1 to 2.7 THz could be partly filtered, and the central peak was at ～0.26. The high frequency signal could be observed to decrease, especially for the frequency above ～1 THz. Moreover, the transmission peak from small-size sample with less hole arrays shifts to high frequency at ～0.53 THz due to both the effects of boundary condition and insufficient periodical extension. Furthermore, finite element method with surface plasmon polariton theory is employed to analyze this extraordinary optical transmission and filter phenomena.     

Ectopic Darier's Disease of the Cervix: an Extraordinary Cause of an Abnormal Smear

A small number of skin diseases may involve either extremity of the alimentary tract or the vulva. Fortunately for patients and cytoscreeners, they rarely involve the cervix or vagina. When they do, difficulty in diagnosis may arise if a full history is not provided. A case is described of cervicovaginal Darier's disease, which presented with an abnormal cervical smear and led to a dermatological referral.
Un petit nombre de pathologies cutanées peuvent concerner une extrémité du tractus digestif ou la vulve. Heureusement pour les maladies et pour les cytotechniciens, ces affections touchent rarement le col ou le vagin. Lorsqu'elles le font, des difficultés diagnostiques peuvent exister si l'histoire clinique compléte n'est pas transmise. Ce travail décruit un cas de localisation cervico-vaginale de maladie de Darier, qui s'est présenté avec un frottis cervical anormal et qui à conduit a une consultation dermatologique.
Eine kleine Zahl von Hauterkrankungen befällt gelegentlich auch die Analregion und die Vulva. 1st dies der Fall kann bei Fehlen der Anamnese eine zytologische Beurteilung schwierig sein. Ein derartiger Fall, der ein dermatologisches Konzil crforderlich machte, wird vorgestellt.     

Identifying Bioaccumulative Halogenated Organic Compounds Using a Nontargeted Analytical Approach: Seabirds as Sentinels

Persistent organic pollutants (POPs) are typically monitored via targeted mass spectrometry, which potentially identifies only a fraction of the contaminants actually present in environmental samples. With new anthropogenic compounds continuously introduced to the environment, novel and proactive approaches that provide a comprehensive alternative to targeted methods are needed in order to more completely characterize the diversity of known and unknown compounds likely to cause adverse effects. Nontargeted mass spectrometry attempts to extensively screen for compounds, providing a feasible approach for identifying contaminants that warrant future monitoring. We employed a nontargeted analytical method using comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry (GC×GC/TOF-MS) to characterize halogenated organic compounds (HOCs) in California Black skimmer (Rynchops niger) eggs. Our study identified 111 HOCs; 84 of these compounds were regularly detected via targeted approaches, while 27 were classified as typically unmonitored or unknown. Typically unmonitored compounds of note in bird eggs included tris(4-chlorophenyl)methane (TCPM), tris(4-chlorophenyl)methanol (TCPMOH), triclosan, permethrin, heptachloro-1''-methyl-1,2''-bipyrrole (MBP), as well as four halogenated unknown compounds that could not be identified through database searching or the literature. The presence of these compounds in Black skimmer eggs suggests they are persistent, bioaccumulative, potentially biomagnifying, and maternally transferring. Our results highlight the utility and importance of employing nontargeted analytical tools to assess true contaminant burdens in organisms, as well as to demonstrate the value in using environmental sentinels to proactively identify novel contaminants.