Hypomethylation of the aquatic invasive plant,Ludwigia grandiflora subsp. hexapetala mimics the adaptive transition into the terrestrial morphotype

Ongoing global changes affect ecosystems and open up new opportunities for biological invasion. The ability of invasive species to rapidly adapt to new environments represents a relevant model for studying short-term adaptation mechanisms. The aquatic invasive plant, Ludwigia grandiflora subsp. hexapetala, is classified as harmful in European rivers. In French wet meadows, this species has shown a rapid transition from aquatic to terrestrial environments with emergence of two distinct morphotypes in 5 years. To understand the heritable mechanisms involved in adjustment to such a new environment, we investigate both genetic and epigenetic as possible sources of flexibility involved in this fast terrestrial transition. We found a low overall genetic differentiation between the two morphotypes arguing against the possibility that terrestrial morphotype emerged from a new adaptive genetic capacity. Artificial hypomethylation was induced on both morphotypes to assess the epigenetic hypothesis. We analyzed global DNA methylation, morphological changes, phytohormones and metabolite profiles of both morphotype responses in both aquatic and terrestrial conditions in shoot and root tissues. Hypomethylation significantly affected morphological variables, phytohormone levels and the amount of some metabolites. The effects of hypomethylation depended on morphotypes, conditions and plant tissues, which highlighted differences among the morphotypes and their plasticity. Using a correlative integrative approach, we showed that hypomethylation of the aquatic morphotype mimicked the characteristics of the terrestrial morphotype. Our data suggest that DNA methylation rather than a new adaptive genetic capacity is playing a key role in L. grandiflora subsp. hexapetala plasticity during its rapid aquatic to terrestrial transition.     

基于陆地-水生态系统耦合的海河流域水生态功能分区

水生态功能分区是针对水生态系统特征的陆地生态系统划分,是为流域水生态管理提供生态背景和基本单元。陆地-水生态系统的耦合是水生态功能分区的核心,但多停留在个别小流域进行理论探讨,大型流域的实际案例较少。针对海河流域独特的气候、地貌、水文和人类活动特征,提出了水生态功能分区的三级指标体系。一级二级区针对气候、地貌、水文背景进行"自上而下"的分区,三级区针对人类活动对水资源、水环境、生境影响,采用"自下而上"的分区方法。最终,海河流域划分了6个一级区、16个二级区和73个三级区。研究充分体现了"以水定陆、以陆控水"的基本原则,以及"自下而上"和"自上而下"分区方法的优点,结果可为海河流域水生态管理提供科学依据,为水资源空间调配与合理利用、产业结构布局与区域协调等服务。     

CO2 supersaturation along the aquatic conduit in Swedish watersheds as constrained by terrestrial respiration,aquatic respiration and weathering

We tested the hypothesis that CO₂ supersaturation along the aquatic conduit over Sweden can be explained by processes other than aquatic respiration. A first generalized‐additive model (GAM) analysis evaluating the relationships between single water chemistry variables and pCO₂ in lakes and streams revealed that water chemistry variables typical for groundwater input, e.g., dissolved silicate (DSi) and Mg²⁺ had explanatory power similar to total organic carbon (TOC). Further GAM analyses on various lake size classes and stream orders corroborated the slightly higher explanatory power for DSi in lakes and Mg²⁺ for streams compared with TOC. Both DSi and TOC explained 22–46% of the pCO₂ variability in various lake classes (0.01–>100 km²) and Mg²⁺ and TOC explained 11–41% of the pCO₂ variability in the various stream orders. This suggests that aquatic pCO₂ has a strong groundwater signature. Terrestrial respiration is a significant source of the observed supersaturation and we may assume that both terrestrial respiration and aquatic respiration contributed equally to pCO₂ efflux. pCO₂ and TOC concentrations decreased with lake size suggesting that the longer water residence time allow greater equilibration of CO₂ with the atmosphere and in‐lake mineralization of TOC. For streams, we observed a decreasing trend in pCO₂ with stream orders between 3 and 6. We calculated the total CO₂ efflux from all Swedish lakes and streams to be 2.58 Tg C yr^?1. Our analyses also demonstrated that 0.70 Tg C yr^?1 are exported to the ocean by Swedish watersheds as HCO₃^? and CO₃^2? of which about 0.56 Tg C yr^?1 is also a residual from terrestrial respiration and constitute a long‐term sink for atmospheric CO₂. Taking all dissolved inorganic carbon (DIC) fluxes along the aquatic conduit into account will lower the estimated net ecosystem C exchange (NEE) by 2.02 Tg C yr^?1, which corresponds to 10% of the NEE in Sweden.     

Non‐adaptive phenotypic plasticity: the effects of terrestrial and aquatic herbicides on larval salamander morphology and swim speed

Phenotypic plasticity, although ubiquitous, may not always be advantageous. Non‐adaptive plasticity is likely to occur in response to novel environmental stress. Anthropogenic contaminants, such as herbicides, are novel stressors that are not present in the evolutionary history of most species. We investigated the pattern and consequences of phenotypic plasticity induced by four glyphosate‐based herbicides (two terrestrial and two aquatic) in larvae of the spotted salamander, Ambystoma maculatum, by determining (1) whether the herbicides induced different morphologies; (2) if different morphologies translated to differences in burst swim performance; and (3) how induced individuals performed relative to non‐induced controls. Different herbicide formulations led to the production of significantly different head and tail morphologies, and tail morphology correlated with fastest escape speed. However, escape speed did not vary among treatments. In addition, three out of four herbicide treatments experienced accelerated growth rates, in terms of the lateral size of tails, although the tail shapes were either similar to preliminary controls or intermediate between preliminary and final controls. These observations suggest that herbicide‐induced morphology is a case of non‐adaptive phenotypic plasticity, and that there is potentially a trade‐off between growth and development for larvae exposed to different formulations. Understanding the functional significance of induced phenotypes is important for determining their importance in shaping an organism's ecological interactions and evolutionary trajectories. Furthermore, under different conditions, the morphological changes that we observed in response to exposure to herbicides might affect salamander fitness and influence population dynamics.     

Current practices and emerging possibilities for reducing the spread of oomycete pathogens in terrestrial and aquatic production systems in the European Union

Diseases caused by oomycete pathogens are a global threat to forestry, agriculture and aquaculture. Because of their complex life cycles, characterised by dormant resting structures that enable their survival for years under hostile environmental conditions, reducing the spread of oomycetes is a challenging task. In this review, we present an overview of this challenge, starting from the need to understand the natural and anthropogenic dispersal pathways of these pathogens. Focusing on the European Union, we explore current legislation that forms a backbone for biosecurity protocols against the spread of oomycetes through trade and transport. We discuss the options for prevention, containment and long-term management of oomycetes in different production settings, emphasising the importance of prevention as the most cost-efficient strategy to reduce the spread of these pathogens. Finally, we highlight some of the new and emerging technologies and strategies as potential tools in the integrated pest management of animal and plant diseases caused by oomycetes. We emphasise the urgency of actions to halt the global spread of these pathogens.     

Molecular,morphological, and ecological differences between the terrestrial and aquatic forms of Oxyrrhynchium speciosum (Brid.) Warnst. (Brachytheciaceae)

Oxyrrhynchium speciosum (Brid.) Warnst. is a relatively uncommon moss that can be found in wetland habitats across Europe and New Zealand. In this paper, we address the morphological, molecular and ecological relationships between the aquatic form of O. speciosum discovered in a deep, Chara-dominated lake (Budzis?awskie, NW Poland) and its terrestrial relatives. Morphological assessments revealed a considerable difference between terretrial and deep-water samples of O.speciosum. The aquatic form of O. speciosum was, on average, 12 times larger, with more branched stems (4–30 times) and longer leaves (1–2 times).

Investigation of ITS1-5·8S-ITS2-26S region sequences, however, revealed no distinction between the terrestrial and aquatic forms. An analysis of the ecological data suggests that the presence of O. speciosum in deep lake habitats is not incidental (as with many land species developing in aquatic environments). On the contrary, aquatic forms have a distinct ecological niche. Our results confirm that both forms of O. speciosum are closely related to O. hians (Hedw.) Loeske (a terrestrial species). The data indicate that O. speciosum is nested within a well-supported O. hians clade and separation of these species may be connected with polyploidization that occurred during their evolution.     

Physiological and photosynthetic plasticity in the amphibious, freshwater plant, Littorella uniflora, during the transition from aquatic to dry terrestrial environments

The physiological and photosynthetic responses of Littorella uniflora (L.) Ascherson, an amphibious macrophyte of isoetid life form, to rapid and prolonged emersion onto dry land, was studied at a reservoir. Water relations were little affected in the short term, but declining water potential and turgor pressure indicated water stress after flowering. High leaf lacunal CO₂ concentrations suggested continued CO₂ uptake from sediments. In contrast, a switch from Crassulacean acid metabolism (CAM) to C₃ photosynthesis was indicated by much lower levels of ΔH⁺ (down minus dusk titratable acidity) and phosphoenolpyruvate carboxylase (PEPC) activity in new terrestrial leaves, 7–8‐fold higher activity of ribulose bisphosphate carboxylase oxygenase (Rubisco), and increased chlorophyll and soluble protein contents. Accumulated nitrate and amino acid pools were depleted, whereas storage of carbohydrates as soluble sugars, fructan and starch increased. Plant carbon and nitrogen isotope ratios (δ¹³C and δ¹⁵N) declined, perhaps reflecting changes in C fixation processes, N metabolism, and source C and N. In leaves of plants grown half‐emersed for an extended period, contrasting activities of PEPC and Rubisco were found in submersed and emersed portions. Overall, L. uniflora showed considerable phenotypic plasticity, yet seemed to remain poised for re‐submersion; these characteristics could be adaptive in the unpredictable water margin habitat.     

Genomic analysis of the emergent aquatic plant Sparganium stoloniferum provides insights into its clonality,local adaptation and demographic history

Clonal propagation and extensive dispersal of seeds and asexual propagules are two important features of aquatic plants that help them adapt to aquatic environments. Accurate measurements of clonality and effective clonal dispersal are essential for understanding the evolution of aquatic plants. Here, we first assembled a high-quality chromosome-level genome of a widespread emergent aquatic plant Sparganium stoloniferum to provide a reference for its population genomic study. We then performed high-depth resequencing of 173 individuals from 20 populations covering different basins across its range in China. Population genomic analyses revealed three genetic lineages reflecting the northeast (NE), southwest (SW) and northwest (NW) of its geographical distribution. The NE lineage diverged in the middle Pleistocene while the SW and NW lineages diverged until about 2400 years ago. Clonal relationship analyses identified nine populations as monoclonal population. Dispersal of vegetative propagules was identified between five populations covering three basins in the NE lineage, and dispersal distance was up to 1041 km, indicating high dispersibility in emergent aquatic plant species. We also identified lineage-specific positively selected genes that are likely to be involved in adaptations to saline wetlands and high-altitude environments. Our findings accurately measure the clonality, determine the dispersal range and frequency of vegetative propagules, and detect genetic signatures of local adaptation in a widespread emergent aquatic plant species, providing new perspectives on the evolution of aquatic plants.     

In vitro propagation and shoot encapsulation as tools for ex situ conservation of the aquatic plant Ludwigia palustris (L.) Ell.

Ludwigia palustris (L.) Ell. is an aquatic perennial herb present in several regions of Italy, which is one of its native countries. In this research, micropropagation and encapsulation protocols were established from axillary buds of L. palustris. Shoots proliferated on half-strength Murashige and Skoog medium without growth regulators. Different culture vessels were tested. Shoots in GROWTEK bioreactor showed the highest fresh and dry weight and total length while the plantlets grown in the RITA bioreactor showed the highest shoot number per explant. Encapsulation of L. palustris microcuttings with sodium alginate formed small and whitish beads which were stored for 14 or 28 days at 7° or 25°C. Storage for 14 days at both temperatures gave the best results but prolonged storage at 25°C decreased the shoot viability to 73%. After 4 weeks of recovery, all the plantlets showed the typical features of the species. Even though the latest Italian IUCN Red List does not mention L. palustris, conservation measures are proposed at local level because this species locally remains vulnerable mainly due to the loss of adequate habitats.Our protocol could be one of the methods for ex situ conservation of L. palustris particularly because its seed storage behavior is uncertain.     

Metabolic responses of Lemna minor to lead ions I. Growth, chlorophyll level and activity of fermentative enzymes

Duckweed Lemna minor L. was grown on Wang culture medium supplemented with lead ions for 24 hours. Metal was tested at 1.5, 3 and 6 mg·dm⁻³ concentrations. The growth of Lemna minor was inhibited by lead ions, but the dry to fresh weight ratio increased as the concentration of Pb²⁺ in the medium increased. With increased concentrations of Pb ions, the contents of chlorophyll a and chlorophyll b in roots and fronds were correspondingly lower in comparision with the control. The effect of lead upon activities of some glycolitic and fermentative enzymes in roots of duckweed was examined. The activity of pyruvate kinase decreased with increasing lead concentrations, but cytosolic malate dehydrogenase behaved in an opposite manner. The lowest concentration of Pb stimulated alcohol dehydrogenase; phosphoenolopyruvate carboxylase activity was maintained at relatively constant values at all tested lead concentrations.     

Behavioural,developmental and morphological responses of Chironomus gr. thummi larvae (Diptera,Nematocera) to aquatic pollution

Populations of Chironomus gr. thummi larvae from two differently polluted lowland streams (Dommei, high cadmium and zinc; Ijse, medium copper and organic xenobiotics) were screened for behavioural and morphological responses to pollution. Behaviours such as locomotion (swimming and looping), respiration movements (ventilation) and inactivity were quantified with impedance conversion technique. Chironomids from the Dommel were more active than larvae from Ijse. In Ijse, deformed larvae showed less emergence, less locomotion and more ventilation than non-deformed larvae. In Dommel, deformed and normal larvae were equally fit (behaviour, emergence).     

Relationships of water temperature and aquatic macroinvertebrate community structure with non-native riparian plant densities in the southern Cape,South Africa

Non-native vegetation in the riparian zone impacts on water temperatures, flow patterns, degree of shading, channel modification, and changes to natural sediment loads. Freshwater ecosystems in the Garden Route Initiative planning domain are of particular conservation value, because of the rich Gondwanaland relict aquatic macroinvertebrate fauna found in the rivers there, which are vulnerable to thermal changes. Data were collected during 2013 and 2014 at 19 sites on seven river systems between George and Knysna in the southern Cape, South Africa. These included 12 months of hourly water temperatures at all sites, and quantitative sampling of aquatic macroinvertebrates at ten sites. Each site was characterised in terms of water quality (pH, conductivity and turbidity) and general characteristics, including impacts such as density of non-native riparian trees. At the family level, aquatic macroinvertebrate communities showed variation between sites and seasons. Differences were more pronounced on the basis of natural land cover type (fynbos versus indigenous forest) than densities of non-native invasive riparian vegetation. Conservation of these river systems will depend on maintaining a mosaic of natural vegetation types.     

The morphological variation of the eggs and genital plates of two morphotypes of Triatoma protracta Uhler, 1894

The control of triatomine insects is necessary because these insects are the principal vectors of Trypanosoma cruzi, the agent of Chagas disease. Nevertheless, some of these vectors, such as Triatoma protracta, have not been studied adequately and their importance and taxonomic status has not yet been defined in detail and must be reevaluated in view of the continuing taxonomic uncertainties associated with the species. To help clarify the taxonomic status of T. protracta, the eggs and genital plates of two morphotypes were analyzed. Qualitative and quantitative morphological differences were observed in two morphotypes, designated T. p. protracta and T. p. nahuatlae according to Ryckman (1962). The morphotype T. p. protracta exhibited large and wide eggs with pores forming large padded polygonal structures, whereas the eggs of the morphotype T. p. nahuatlae were small and smooth. The size of the 9(th) genital urosternite was longer and wider in females in contrast to males in both morphotypes. However, these size differences were relatively greater in T. p. protracta. The high morphological variation found between the morphotypes of T. protracta suggests that they should be separated. Accordingly, it is probable that this group should be re-classified.     

Morphological responses to water-level fluctuations of two submerged macrophytes,Myriophyllum spicatum and Hydrilla verticillata

Aims Myriophyllum spicatum and Hydrilla verticillata are common submerged macrophytes in the Yangtze River basin. To investigate their tolerances and adaptations to water-level fluctuations, an experiment was conducted in a pond.Methods We designed five different amplitudes of water-level fluctuations as static, ±15, ±30, ±60 and ±90 cm during the 74 days of the experiment. In each amplitude treatment, two cultivation methods were examined as monoculture and mixed culture.Important findings The results showed that M. spicatum had greater morphological responses to water-level fluctuations than H. verticillata. Fluctuating amplitude had significant effects on branch number, shoot length and root dry weight (DW) of M. spicatum, whereas it only had significant effect on branch number of H. verticillata. Both fluctuating amplitude and cultivation method had significant effects on total DW of M. spicatum, which was higher in monoculture than mixed culture. The total DW of H. verticillata was affected by fluctuating amplitude only, and the largest biomass was in the amplitude of ±30 cm. Fruit DW of M. spicatum was largest in the amplitude of ±30 cm, high amplitude of water-level fluctuations would inhibit flowering and seed production. Root DW proportion was significantly affected by fluctuating amplitude and cultivation method in both species, and the root DW proportion of M. spicatum was significantly higher in the amplitude-of ±90 cm. We conclude that moderate amplitude of water-level fluctuations can promote the distribution and growth of both species, and in order to accelerate the restoration of both species in natural habitats, the optimum amplitude should be keep at ±15 to ±30 cm.     

Differential population responses of native and alien rodents to an invasive predator,habitat alteration and plant masting

Invasive species and anthropogenic habitat alteration are major drivers of biodiversity loss. When multiple invasive species occupy different trophic levels, removing an invasive predator might cause unexpected outcomes owing to complex interactions among native and non-native prey. Moreover, external factors such as habitat alteration and resource availability can affect such dynamics. We hypothesized that native and non-native prey respond differently to an invasive predator, habitat alteration and bottom-up effects. To test the hypothesis, we used Bayesian state-space modelling to analyse 8-year data on the spatio-temporal patterns of two endemic rat species and the non-native black rat in response to the continual removal of the invasive small Indian mongoose on Amami Island, Japan. Despite low reproductive potentials, the endemic rats recovered better after mongoose removal than did the black rat. The endemic species appeared to be vulnerable to predation by mongooses, whose eradication increased the abundances of the endemic rats, but not of the black rat. Habitat alteration increased the black rat''s carrying capacity, but decreased those of the endemic species. We propose that spatio-temporal monitoring data from eradication programmes will clarify the underlying ecological impacts of land-use change and invasive species, and will be useful for future habitat management.     

Unifying research on the fragmentation of terrestrial and aquatic habitats: patches,connectivity and the matrix in riverscapes

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Morphological responses of two plant species from different elevations in the Dongting Lake wetlands,China, to variation in water levels

The vegetation of wetlands show strong zonation patterns, but the mechanisms determining these patterns are not fully understood. In the present study, growth and morphological responses to a water level gradient (–20 cm (i.e. water level 20 cm below soil surface), –10 cm, 0 cm, 10 cm, 20 cm) were compared between a higher elevation plant (Imperata cylindrica) and a lower elevation plant (Carex brevicuspis) in the Dongting Lake wetlands of China. For both species, the aboveground, belowground, and total biomass were greater at –10 cm than at any other water level.. However, when the water level increased from –10 cm to 0 cm, there was a greater decrease in the biomass of I. cylindrica than in that of C. brevicuspis. Plant height, tiller number, leaf length, leaf width and leaf area showed greater variation along the water level gradient in I. cylindrica than in C. brevicuspis. Generally, with increasing water level, root length, rhizome number, and adventitious root biomass and number all decreased in I. cylindrica. However, in C. brevicuspis, neither the rhizome number nor the primary adventitious root biomass differed significantly among the five water levels. These results indicate that I. cylindrica have a lower tolerance for flooding and higher water sensitivity than C. brevicuspis and these differences may explain why I. cylindrica is found at relatively higher elevations that are not prone to flooding, while C. brevicuspis is found at comparatively lower elevations in the Dongting Lake wetlands.     

Evolutionary mode, tempo, and phylogenetic association of continuous morphological traits in the aquatic moss genus Amblystegium

Evolutionary significance of morphological characters that have traditionally been used for species delineation in the aquatic moss genus Amblystegium was tested by partitioning the environmentally and genetically induced morphological variation and focusing on morphological evolution using comparative methods. Cultivation experiments under controlled condition showed that most of the morphological variation in nature resulted from plasticity. Information regarding genetically fixed morphological variation and genetic similarity derived from polymorphic inter-simple sequence repeat markers was combined into an explicit model of morphological evolution. Maximum likelihood estimates of the model parameters indicated that evolution of most characters tended to accelerate in the most recent taxa and was often independent from the phylogeny. Constraining the different characters to be independent from each other most often produced a less likely result than when the characters were free to evolve in a correlated fashion. Thus, the morphological characters that have traditionally been used to circumscribe different Amblystegium species lack the independence, diagnostic value for specific lineages, and stability that would be required for distinguishing different species.