Nutritional ecology provides insights into competitive interactions between closely related Martes species

1. Closely related predator species often share several prey items, making it hard to differentiate the effects on their feeding habits of variation in food availability and of competition. We hypothesised that we could overcome this obstacle by quantifying and comparing nutritional niches.
2. We reviewed dietary studies that assessed the relative bulk of each food item, as either per cent biomass or per cent mean volume, in the diet of two closely related species, pine marten Martes martes and stone marten Martes foina, and calculated the nutrient profiles (intakes of protein, lipids and carbohydrates) of each diet.
3. Both martens’ diets were tightly clustered (mean values: 47% of energy from protein, 39% from lipid, and 14% from carbohydrate). In allopatry, the nutritional niches of the two species did not differ, but in sympatry, the stone marten ate more carbohydrates and less protein than the pine marten. In allopatry, the protein intake of the stone marten remained high (45–52%) in very different habitats, from cultivated lowland to Alpine forests.
4. Our data suggest that stone marten frugivory may, at least partially, be the result of interspecific competition. By analysing dietary data in the framework of nutritional ecology, we could compare the feeding requirements of pine martens and stone martens more effectively than by using classical estimates of trophic niche overlap at the food item level. This approach may help to shed light on the trophic relationships of other competing species.

     

Far from the madding crowd: Tolerance toward human disturbance shapes distribution and connectivity patterns of closely related Martes spp.

To assess niche overlap between the most similar European sympatric carnivores, the pine marten Martes martes and stone marten Martes foina, and outline their potential distributions and connectivity corridors in Central Italy, we applied a multivariate kernel density procedure which allowed to assess both species' ecological hypervolumes based on a set of 16 environmental predictors and used the resulting probability of occurrence map as a resistance surface in electrical circuit theory-based models. Distance to watercourses and percent cover of deciduous forest and shrubland were the most relevant factors shaping pine marten ecological niche, while stone marten distribution was mainly shaped by human population density and cover of both human settlements and deciduous forest. Overlap between the hypervolumes of the two martens was low-to-moderate, while, on average, landscape connectivity was higher for the stone marten. The inclusion in the models of human disturbance-related variables enabled to define a possible mechanism driving habitat partitioning in human-altered landscapes. Based on our results, increasing human density and urbanization of European lowland and hilly landscapes are expected to represent a greater threat to the pine marten than the stone marten.     

Snow tracking reveals different foraging patterns of red foxes and pine martens

Red fox (Vulpes vulpes) shares similar prey preferences and co-occurs with several other carnivores, and is together with pine marten (Martes martes), the most common mesocarnivore in the northern boreal forest. Voles are important prey for both species, but it is unclear to what extent they compete for the same food resources in winter. Here, we use 2139 km and 533 km of meticulous snow tracking of red foxes and pine martens to evaluate their food niches. We measured hunting and digging behaviour, whether successful or not, and the effect of snow depth and temperature. Pine martens were restricted to forested habitats, whereas red foxes used a wide range of habitats. Red foxes were found to dig more often than pine martens, 0.67 vs. 0.39 digging events per kilometre. Hunting was less common and similar in both species, about 0.1 hunting event per kilometre. Pine martens were more efficient in hunting and finding food remains compared to red foxes. Increasing snow depth reduced hunting success and also reduced dig success of red foxes. Food niche overlap was small. Red foxes used mostly voles and carrion remains of ungulates, whereas pine martens used cached eggs and small birds. We suggest that caching eggs is an important strategy for pine martens to survive winter in northern latitudes. Snow depth was important for capturing voles, and thick snow cover appeared to mask the effect of vole peaks. Intensified land use, as clear-cutting and leaving slaughter remains from harvest, will benefit red foxes on the expense of pine martens. The ongoing climate change with warmer winters and less snow will likely further benefit the red fox.     

Where to sleep in a rural landscape? A comparative study of resting sites pattern in two syntopic Martes species

The niche‐complementarity hypothesis predicts that two sympatric species must differ in their requirements for one of the three main ecological dimensions (i.e. habitat use, diet, and activity time) to coexist. European pine marten Martes martes and stone marten M. foina are syntopic medium‐sized mustelids with very similar morphology and ecology for which resting sites are a key resource. To better understand how these species coexist, we investigated whether key features of their resting site pattern (number of resting sites, area over which they are distributed, main habitat type used for resting) differed. We used diurnal telemetry to identify resident individuals (e.g. spatially stable individuals over time) and to locate them during resting periods in a fragmented forested area in France. Stone marten used fewer resting sites distributed over a smaller surface area than pine marten. Most stone marten resting sites were located in open habitat (83%) in the proximity of human habitations, whereas pine martens rested almost exclusively in forest (98%). Sex, age, and season explained some variability in both the number of resting sites and the probability of resting within forested habitat for stone marten but not pine marten. The area covered by resting sites was larger in males than in females, but age modulated this difference in an opposite way for the two species. Such a pattern was expected given the intra‐sexual territoriality and the reproductive phenology of these species. Overall, stone marten showed higher inter‐individual variability in resting site pattern than pine marten. The particular pattern observed in subadult male stone martens during summer (increase in resting site surface area and in the probability to rest in forest) may reflect an attempt to settle in forests, and we discuss these implications in the context of interspecific competition.     

Effect of felling on red fox (Vulpes vulpes) and pine marten (Martes martes) diets in transitional mixed forest in Belarus

In transitional mixed forests in northern and central Belarus the influence of intensified felling on the diets of red foxes Vulpes vulpes L. and pine martens Martes martes L. was investigated in two model forested terrains with sandy and clay top-grounds. A total of 1904 scats of red foxes and 1624 scats of pine martens were analysed over two periods differed by logging rate. When logging rate was conservative, red fox and pine marten diets were found to be similar, but under heavy logging feeding of the predator species shifted. In both model woodlands we found the same pronounced dietary trend of higher consumption of rodents, first of all, Microtus voles. The dietary changes were well related to the registered increase in Microtus vole numbers and total number of rodents in felling areas. The increased preying on rodents caused lower consumption of other food items, particularly medium-sized mammals (year-round) or/and birds or/and fruits (in the warm season) or/and mammalian carrion (in the cold season). In the conditions of intensified felling the food niches of the red fox and pine marten diverged mostly because of the great difference in the species structure of rodents consumed. Red foxes turned to preying on Microtus voles more frequently, but less on bank voles Myodes glareolus; while pine martens increased their taking of Microtus voles, continued foraging for bank voles and began taking slightly more of Apodemus mice. Before heavy logging dietary similarity between the red fox and pine marten was high and did not vary considerably through seasons and study areas, whereas after felling was intensified their diet overlap became lower.     

Spatial Niche Segregation of Sympatric Stone Marten and Pine Marten – Avoidance of Competition or Selection of Optimal Habitat?

Coexistence of ecologically similar species relies on differences in one or more dimensions of their ecological niches, such as space, time and resources in diel and/or seasonal scales. However, niche differentiation may result from other mechanisms such as avoidance of high predation pressure, different adaptations or requirements of ecologically similar species. Stone marten (Martes foina) and pine marten (Martes martes) occur sympatrically over a large area in Central Europe and utilize similar habitats and food, therefore it is expected that their coexistence requires differentiation in at least one of their niche dimensions or the mechanisms through which these dimensions are used. To test this hypothesis, we used differences in the species activity patterns and habitat selection, estimated with a resource selection function (RSF), to predict the relative probability of occurrence of the two species within a large forest complex in the northern geographic range of the stone marten. Stone martens were significantly heavier, have a longer body and a better body condition than pine martens. We found weak evidence for temporal niche segregation between the species. Stone and pine martens were both primarily nocturnal, but pine martens were active more frequently during the day and significantly reduced the duration of activity during autumn-winter. Stone and pine martens utilized different habitats and almost completely separated their habitat niches. Stone marten strongly preferred developed areas and avoided meadows and coniferous or deciduous forests. Pine marten preferred deciduous forest and small patches covered by trees, and avoided developed areas and meadows. We conclude that complete habitat segregation of the two marten species facilitates sympatric coexistence in this area. However, spatial niche segregation between these species was more likely due to differences in adaptation to cold climate, avoidance of high predator pressure and/or food preferences by both species than competitive interaction between them.     

Range expansion of the pine marten (Martes martes) in an agricultural landscape matrix (NW Italy)

Habitat segregation is considered to favour the coexistence of sympatric pine martens Martes martes and stone martens M. foina, the latter being displaced to agricultural and urbanised areas. Subsequent to the report of pine martens in cultivated areas of the western River Po plain (NW Italy), we reviewed all available information on the presence of this species in plain areas of northern Italy and, for two study areas, applied a non-invasive PCR-RFLP method for the identification of Martes species from faecal mtDNA.A total of 24 pine marten records were collected, grouped in the western part of the River Po plain. The number of records showed an exponential increase from 1988 to 2007, the percentage of woods in a 10 km² wide circular plot surrounding the location of records being inversely correlated to its distance from the 300 m a.s.l. contour line. In the two study areas, 36 out of 119 “marten-like” faeces were assigned to the pine marten, whilst none belonged to the stone marten. In the best monitored area, the pine marten was present almost constantly.Our results suggest that the pine marten is expanding its range to include cultivated areas which were previously considered a prerogative of the more synanthropic stone marten.     

Efficient species identification of pine marten (<Emphasis Type="Italic">Martes martes</Emphasis>) and red fox (<Emphasis Type="Italic">Vulpes vulpes</Emphasis>) scats using a 5′ nuclease real-time PCR assay

Monitoring wildlife species by DNA identification of samples collected non-invasively is an important tool in conservation management. DNA identification of species from faecal (scat) samples is problematic due to the small quantities and poor quality of the DNA isolated from such samples. This study demonstrates the use of real-time PCR technology in the identification of red fox (Vulpes vulpes) and pine marten (Martes martes). It is shown that real-time PCR can be used to identify fox and pine marten by either melting curve analysis (Tm determination) with SYBR Green 1 detection or by the use of species specific fluorogenic probes. The technique is shown to work efficiently with scat DNA.     

Avian top predator and the landscape of fear: responses of mammalian mesopredators to risk imposed by the golden eagle

Top predators may induce extensive cascading effects on lower trophic levels, for example, through intraguild predation (IGP). The impacts of both mammalian and avian top predators on species of the same class have been extensively studied, but the effects of the latter upon mammalian mesopredators are not yet as well known. We examined the impact of the predation risk imposed by a large avian predator, the golden eagle (Aquila chrysaetos, L.), on its potential mammalian mesopredator prey, the red fox (Vulpes vulpes, L.), and the pine marten (Martes martes, L.). The study combined 23 years of countrywide data from nesting records of eagles and wildlife track counts of mesopredators in Finland, northern Europe. The predation risk of the golden eagle was modeled as a function of territory density, density of fledglings produced, and distance to nearest active eagle territory, with the expectation that a high predation risk would reduce the abundances of smaller sized pine martens in particular. Red foxes appeared not to suffer from eagle predation, being in fact most numerous close to eagle nests and in areas with more eagle territories. This is likely due to similar prey preferences of the two predators and the larger size of foxes enabling them to escape eagle predation risk. Somewhat contrary to our prediction, the abundance of pine martens increased from low to intermediate territory density and at close proximity to eagle nests, possibly because of similar habitat preferences of martens and eagles. We found a slightly decreasing trend of marten abundance at high territory density, which could indicate that the response in marten populations is dependent on eagle density. However, more research is needed to better establish whether mesopredators are intimidated or predated by golden eagles, and whether such effects could in turn cascade to lower trophic levels, benefitting herbivorous species.     

Coexistence of carnivores in a heterogeneous landscape: habitat selection and ecological niches

Understanding distributional patterns and mechanisms used by species for habitat selection is crucial to adopt effective land management policies in terms of biodiversity conservation. A heterogeneous landscape may allow coexistence of species. That coexistence will be dependent on the availability of the resources in the habitat that has to be sufficient to fulfil their basic needs. The present study aimed to investigate habitat selection, niche breadth and niche overlap of three sympatric carnivore species (Vulpes vulpes, Genetta genetta and Martes foina) in a typically fragmented landscape from Central Portugal, using camera-trapping techniques. The results obtained revealed that the investigated species use the available habitats differently and in a non-random way. The red fox showed the most specialized behaviour, positively selecting coniferous forests. The common genet preferred eucalyptus, avoiding old-growth mixed woodland, in contrast with stone marten that exhibited a strong preference for this late habitat, avoiding eucalyptus. Concerning the niche breadth, the genet had the highest value while the red fox had the lowest one. The results obtained at the camera-trap level showed that the highest niche overlap occurred between the genet and the stone marten which suggests that these species can coexist and share the available resources. Regarding the habitat level, the greatest niche overlap was found for the stone marten and the red fox, indicating the exploration of the same general habitat conditions by both species. The results obtained in the present study support the concept that landscape complexity allows coexistence between species within the same trophic level.     

“Reversed” intraguild predation: red fox cubs killed by pine marten

Camera traps deployed at a badger Meles meles set in mixed pine forest in north-eastern Poland recorded interspecific killing of red fox Vulpes vulpes cubs by pine marten Martes martes. The vixen and her cubs settled in the set at the beginning of May 2013, and it was abandoned by the badgers shortly afterwards. Five fox cubs were recorded playing in front of the den each night. Ten days after the first recording of the foxes, a pine marten was filmed at the set; it arrived in the morning, made a reconnaissance and returned at night when the vixen was away from the set. The pine marten entered the den several times and killed at least two fox cubs. It was active at the set for about 2 h. This observation proves that red foxes are not completely safe from predation by smaller carnivores, even those considered to be subordinate species in interspecific competition.     

A PCR-RFLP-based method to distinguish sable (<Emphasis Type="Italic">Martes zibellina</Emphasis>) and pine marten (<Emphasis Type="Italic">Martes martes</Emphasis>)

Species identification is an important issue in conservation and a particular focus for wildlife forensics. Molecular biological methods retain a unique power to differentiate between difficult samples that lack other identifiable characteristics. The pine marten (Martes martes) and sable (Martes zibellina) are closely related species with very similar pelage characteristics and are often difficult to distinguish from each other. The sable, however, in contrast to the pine marten, remains an endangered and protected animal in China with both hunting and fur trade strictly prohibited for this species. Here, we present a polymerase chain reaction-based restriction fragment length polymorphism method for distinguishing the two species. We sequenced a 638-bp fragment of cytochrome b gene in 39 sables, 68 pine martens, and 10 stone martens and identified all variable nucleotides. A new primer pair was subsequently designed to amplify a 316-bp fragment containing restriction sites of enzyme BseG I and BamH I that are different among martens. When the fragment was cut using BseG I, the resulting restriction pattern was identical in the sable and pine marten, but differed from all other martens. When cut using BamH I, the fragment generated two diagnostic fragments in the sable which could distinguish them from pine martens. This method was valid for all haplotypes of sable and pine marten thus far identified and has high potentially applicability for the identification of the two species.     

Genetic analysis of Turkish martens: Do two species of the genus Martes occur in Anatolia?

Stone marten (Martes foina) and European pine marten (M. martes) occur in western Eurasia. Current distributions of martens within Turkey and phylogenetic relationships among the Turkish and other populations of the two species within Eurasia remain relatively unknown. In this study, we aimed to determine genetic diversity within Martes populations inhabiting Turkey and to reveal the phylogenetic relationships among the Turkish and conspecific populations of the two marten species, using mitochondrial cytochrome b (CytB) sequences. Twenty‐four (24) haplotypes were identified among 86 marten samples collected across Turkey, including 23 novel haplotypes. Genetic distances among the Turkish haplotypes ranged from 0.1% to 0.8%, with an average of 0.3%. The 24 Turkish haplotypes were analysed together with those of conspecific populations deposited in GenBank. Phylogenetic (Bayesian Inference, maximum likelihood, neighbor‐joining) and network analyses revealed that all of the Turkish samples belonged to M. foina and that samples of M. martes were not encountered. Haplotypes of M. foina were divided into five haplogroups. The haplogroup including the two Chinese samples differed markedly from other the haplogroups. The remaining haplogroups contained samples from both the Turkish and European populations. We found that there was a genetically close relationship between the Turkish and the European stone marten populations. As a result of this study, M. martes may not be distributed in the Anatolian part of Turkey, possibly due to a barrier effect of two straits (Dardanelles and Bosporus) and the Caucasus Mountains. On the other hand, M. foina is distributed in both the Anatolian and Thracian parts of Turkey. Our results suggest that Turkey was likely one of the refuges for M. foina during Pleistocene glacial periods and is one of the centres of distribution of stone marten for Europe and the surrounding regions.     

Summer food of sympatric red fox and pine marten in the German Alps

Based on fecal analyses, we compared summer diet composition and trophic niche breadth for the sympatric red fox Vulpes vulpes (n=55 scats) and pine marten Martes martes (n=64) in the foothills of the German Alps. Mammals accounted for 41 and 51% of the consumed biomass by pine martens and red foxes, respectively, and no single mammal species exceeded 8% of the diet. The larger red fox consumed a wider range of prey sizes than the smaller pine marten, and both consumed large amounts of plants and also insects. Whereas the Levins index suggested that both predators have specialist feeding niches, the Shannon-Wiener index showed that both predators were relatively generalist. Despite its preliminary nature, our study suggests that a strict distinction between generalist and specialist trophic niches is not justified for medium-sized carnivores in the Alps, particularly as results greatly depend on the indices used.     

Genetic analysis of sable (<Emphasis Type="Italic">Martes zibellina</Emphasis>) and pine marten (<Emphasis Type="Italic">M. martes</Emphasis>) populations in sympatric part of distribution area in the northern Urals

Analysis of nucleotide sequences of the mitochondrial DNA (mtDNA) control region (495 bp) of sables (Martes zibellina) and pine martens (M. martes) from allopatric parts of the species ranges has shown a considerable interspecific genetic distance (>3%). In sympatric populations of these species in the northern Urals, differences between two species-specific mtDNA lineages are still large; however, classification of each individual nucleotide sequence with one of the two lineages is not correlated with whether the given animal is phenotypically a sable, a pine marten, or a potential hybrid (the so-called “kidas”). This indicates a high degree of reciprocal introgression of the sable and pine marten mtDNA in the northern Urals and suggests that their interspecific hybridization is common in the sympatric zone.     

Endozoochorous seed dispersal by sympatric mustelids, Martes melampus and Mustela itatsi, in western Tokyo, central Japan

We investigated seed dispersal by two sympatric mustelid species, the Japanese marten (Martes melampus) and Japanese weasel (Mustela itatsi), along an intercity forest path in western Tokyo, central Japan, from Jul 2007 to Jul 2008. We aimed to investigate the effect of food/habitat preference of these mustelids (martens are semi-arboreal frugivores while weasels are terrestrial carnivores) on their seed dispersal characteristics, which determine their efficacy as seed dispersers. In total, we analyzed 478 fecal samples collected from the two mustelids (N_marten = 381, N_weasel = 97). The proportions of feces containing seeds for martens and weasels were 81.4% and 55.7%, respectively. The number of plant species whose seeds were found within the feces were 28 and 17, respectively. Almost all seeds within feces of both mustelids were intact. The number of plant species whose seeds were found within a single fecal sample ranged from one to four, but no significant difference was detected between the two mustelids. However, marten feces contained a significantly greater number of seeds of most plant species as well as total number of seeds than did weasel feces. The numbers of plant species and seeds represented in marten feces varied seasonally, but those represented in weasel feces did not. Our findings suggest the possibility that both mustelids act in some ways as seed dispersers, although martens seem to disperse a greater diversity and total amount of seeds.     

Historical and contemporary distributions of carnivores in forests of the Sierra Nevada, California, USA

Aim Mammalian carnivores are considered particularly sensitive indicators of environmental change. Information on the distribution of carnivores from the early 1900s provides a unique opportunity to evaluate changes in their distributions over a 75‐year period during which the influence of human uses of forest resources in California greatly increased. We present information on the distributions of forest carnivores in the context of two of the most significant changes in the Sierra Nevada during this period: the expansion of human settlement and the reduction in mature forests by timber harvest. Methods We compare the historical and contemporary distributions of 10 taxa of mesocarnivores in the conifer forests of the Sierra Nevada and southern Cascade Range by contrasting the distribution of museum and fur harvest records from the early 1900s with the distribution of detections from baited track‐plate and camera surveys conducted from 1996 to 2002. A total of 344 sample units (6 track plates and 1 camera each) were distributed systematically across c. 3,000,000 ha area over a 7‐year period. Results Two species, the wolverine (Gulo gulo) and the red fox (Vulpes vulpes), present in the historical record for our survey area, were not detected during the contemporary surveys. The distributions of 3 species (fisher [Martespennanti], American marten [M. americana], and Virginia opossum [Didelphisvirginiana]) have substantially changed since the early 1900s. The distributions of fishers and martens, mature‐forest specialists, appeared to have decreased in the northern Sierra Nevada and southern Cascade region. A reputed gap in the current distribution of fishers was confirmed. We report for the first time evidence that the distribution of martens has become fragmented in the southern Cascades and northern Sierra Nevada. The opossum, an introduced marsupial, expanded its distribution in the Sierra Nevada significantly since it was introduced to the south‐central coast region of California in the 1930s. There did not appear to be any changes in the distributions of the species that were considered habitat generalists: gray fox (Urocyon cinereoargenteus), striped skunk (Mephitis mephitis), western spotted skunk (Spilogale gracilis), or black bear (Ursus americanus). Detections of raccoons (Procyon lotor) and badgers (Taxidea taxus) were too rare to evaluate. Contemporary surveys indicated that weasels (M. frenata and M. erminea) were distributed throughout the study area, but historical data were not available for comparison. Main conclusions Two species, the wolverine and Sierra Nevada red fox, were not detected in contemporary surveys and may be extirpated or in extremely low densities in the regions sampled. The distributions of the mature forest specialists (marten and fisher) appear to have changed more than the distributions of the forest generalists. This is most likely due to a combination of loss of mature forest habitat, residential development and the latent effects of commercial trapping. Biological characteristics of individual species, in combination with the effect of human activities, appear to have combined to affect the current distributions of carnivores in the Sierra Nevada. Periodic resampling of the distributions of carnivores in California, via remote detection methods, is an efficient means for monitoring the status of their populations.     

On Certain Properties of Water and Energy Metabolism in Representatives of Martes and Mustela Genera (Mammalia: Mustelidae)

The quantities of consumed food and water, quantity and moisture contents of faeces as well as quantity and concentration of excreted urine were determined in representatives of Martes—European pine marten (M. martes) and sable (M. zibellina)—as well as in polecat (Mustela putorius). Under the same cage conditions and free access to food, all three species have similar energy value of their daily diet. However, the level of drinking water consumption and the ratio between the daily total water and energy intake was reliably higher in both Martes species than in polecat. In addition, both marten and sable featured much higher rate of evaporation loss in the overall water balance and, consequently, a higher quantity of heat dissipated with evaporation as compared to polecat. Comparison of the obtained and previous data (Sokolov et al., 1995; Rozhnov, 1991) allowed us to propose that the mentioned differences are specific for representatives of Martes and Mustela genera irrespective of ecological specialization of particular species.     

Factors and mechanisms that explain coexistence in a Mediterranean carnivore assemblage: An integrated study based on camera trapping and diet

To promote management and conservation, it is useful to identify the factors that determine species distribution and to understand the mechanisms that regulate the organization of species assemblages or influence the dynamics of communities. Using information provided by 842 camera-trap photos and 8175 scats, we studied the factors that favour the coexistence of European badgers (Meles meles), red foxes (Vulpes vulpes) and stone martens (Martes foina) in a Mediterranean, agroforestry environment in the Iberian Peninsula. With extensive, simultaneous occupation of the space, and simultaneous activity during a broad time period (basically nocturnal and crepuscular activity patterns), the carnivores displayed different strategies depending on the availability of resources. In summer when plant resources were abundant and easy to access, there was a high overlap in patterns of diet and activity, and the temporal avoidance of the superior competitor allowed joint use of the same plots. In autumn, when there were fewer resources (although still sufficient) that were harder to access, the maintenance of food overlap was compensated for by avoidance and a reduction in overlapping activity. In winter and spring, the differentiation in response behaviour was evident in the partial substitution of plant resources.Differentiation in niche dimensions has been linked to complementarity, the differential needs and capacities of each species, and their biology. Differentiation in response behaviour was compatible with the hierarchical structure of the carnivores: European badger; red fox; stone marten. Knowledge of these factors and mechanisms increases our understanding and can help in the prediction of responses to disturbances. Consequently, it helps to improve management and conservation actions.     

Non-invasive genetic sampling of sympatric marten species (Martes martes and Martes foina): assessing species and individual identification success rates on faecal DNA genotyping

The use of non-invasive genetic sampling (NGS) has become increasingly popular in wildlife research but needs well-planned sampling strategies and reliable laboratory protocols. In this study, we planned to assess the reliability and success of species and individual identifications of sympatric martens (European pine marten Martes martes and stone marten Martes foina) by genotyping non-invasively collected faecal samples. First, we developed a novel and accurate multiplex panel of 15 microsatellite loci, selected by cross species amplification of 41 loci. The application of this panel facilitated species distinction, discarding the presence of putative hybrids. Then, we assessed the impact of sample collector skills on the lab protocol performances. The faecal DNA quality was evaluated by (a) the success of polymerase chain reaction–restriction fragment length polymorphism identification of the two Martes species and (b) the genotyping success and error rates of individual pine marten identifications. The survey was conducted over all the sympatric range of the two species in the Iberian Peninsula by three groups of sample collectors with different experience: expert wildlife biologist, trained volunteers and technical staff from natural parks. Results show that the different expertise between sample collectors significantly influences the success rate of pine marten individual genotyping, but not the species identification success rate. Based on our results, we recommend conducting sampling by experienced field biologist to maximise the quality of NGS and ensure accurate genotyping success. Application of our methods to field collected scats can be used in a cost-effective way to investigate distribution, patterns of genetic diversity and structure as well as to estimate population abundance for sympatric martens.