中国东南沿海15个秋茄种群遗传多样性的SRAP分析

为进一步保护和恢复红树林资源提供分子方面的基础资料和科学依据,本研究采用SRAP标记对15个中国东南沿海红树植物秋茄种群的亲缘关系进行了分析.从120对参试引物组合中选出46对重复性好、条带清晰的引物组合对供试的15份材料基因组DNA进行PCR扩增,得到大小在50～1 000 bp之间条带270,其中多态性条带107条,多态性位点率为39.63%.15个秋茄种群的遗传相似系数在0.004～0.845之间,平均为0.412,说明中国东南沿海秋茄种群存在较丰富的遗传多样性.聚类分析把15份供试种群材料划分为4个类群.15个秋茄种群的遗传多样性没有明显的地域性差异,同一样地域的不同种群之间具有遗传上的差别.建议在今后我国的红树林保护中,应加强对海南东寨港、深圳福田、湛江东北大堤和湛江附城的秋茄种群保护.     

潮滩红树植物抗低温适应的生态学研究

采用电导法定量测定了中国东南沿海红树植物叶片的抗寒力变化。结果表明;(1)海南琼山东寨港主要红树种类冬季抗寒力(半致死温度)介于-2.3～-6.8℃之间,其中红树科植物抗寒力较强,多数种类属于低温敏感性相对较弱的L类型;海桑科和楝科红树种类抗寒力较弱,属于低温敏感性较强的H类型。(2)随纬度升高(个别地点除外),秋茄(Kandelia candel)、桐花树(Aegiceras corniculatum)和红海榄(Rhizophors,stylosa)抗寒力增强,呈现种群分化趋势。(3)同一地点,秋茄和桐花树抗寒力有明显季节变化：夏季最低,秋冬两季高于春季。(4)同一群落内,生长于中潮区滩面的秋茄抗寒力强于高潮区,但桐花树抗寒力在各个滩面相差木大。(5)秋茄和桐花树树冠上不同部位叶片的抗寒力不同,由表及里,由上至下,呈降低趋势。红树叶片抗寒力的种群分化、季节变化和部位差异是其趋异适应的结果,有益于红树植物的生存和繁育。     

广西北部湾典型海岛红树林的结构特征、空间格局及种间种内关联性

为研究广西北部湾茅尾海自然保护区海岛红树林群落的空间点格局和演替规律,在典型红树林海岛设置调查样地,以样地内的桐花树(Aegiceras corniculatum)、秋茄(Kandelia obovata)、白骨壤(Avicennia marina)等红树植物为研究对象,构建单变量函数的完全空间随机模型、异质泊松模型与双变量函数的环形转变模型,分析3种红树林种群的结构特征、空间格局及种内种间关联性。结果发现：(1)桐花树种群的小树和中树的个体数目较多,种群年龄结构呈金字塔型,种群处于增长状态;秋茄种群的中树个体数目较多,种群结构呈钟型,种群数量处于稳定状态;白骨壤个体数相对较少,且幼树较少老树较多,种群更新受阻,种群结构呈纺锤型,属于衰退型种群。(2)红树林群落整体上呈现出空间集聚的分布特征,从不同种群的集聚程度来看：桐花树>白骨壤>秋茄。(3)随着空间尺度的增大,红树林群落在空间分布上依次表现出聚集、随机和均匀3种特征。(4)桐花树与秋茄、白骨壤的种间关系随着尺度增加均表现为空间无关联性-空间负关联性-空间无关联性的演变特征,秋茄与白骨壤的种间关系则为全尺度的空间无关联性。(5)桐花树种内不同龄级之间存在空间正关联性、空间无关联性和空间负关联性,秋茄种内不同龄级之间均表现出空间无联性,白骨壤种群则在不同龄级之间均出现空间正关联性。(6)红树植物种群的空间格局受到自身繁殖特性、生境异质性、种内和种间竞争、病虫害等多种因素的影响。红树林人工种植和恢复需要结合沿海地区的自然生态条件,按照红树林种群的适应形态学特点、群落类型和自然演替规律,种植乡土红树植物,适当引进外来物种,研制出近似天然的人工红树林林分结构,提高群落的生物多样性和群落稳定性,发挥红树林湿地生态系统的生态环境效应。     

秋茄（Kandelia candel）的区域性种群（population）遗传结构

在台湾北部淡水河河口沼泽地带的秋茄（水笔仔）,依其林冠高度略可分成高、矮两个亚种群（Subpopulation）。矮生秋茄长在地面较高的河边,高生秋茄则沿着一条潮溪,长在较低处。使用淀粉凝胶方法研究同功酶组合型式,判断这个地区的区域种群的遗传结构,发现生长在沼泽区内较干燥地带的秋茄和长在潮湿地带的秋茄遗传上的分化程度很低（Fst= 0.043）。这可能是因为区内的基因流传很顺畅,抵消了可能发生的种群分化。     

）的区域性种群（population）遗传结构

在台湾北部淡水河河口沼泽地带的秋茄（水笔仔）,依其林冠高度略可分成高、矮两个亚种群（Subpopulation）。矮生秋茄长在地面较高的河边,高生秋茄则沿着一条潮溪,长在较低处。使用淀粉凝胶方法研究同功酶组合型式,判断这个地区的区域种群的遗传结构,发现生长在沼泽区内较干燥地带的秋茄和长在潮湿地带的秋茄遗传上的分化程度很低（Fst= 0.043）。这可能是因为区内的基因流传很顺畅,抵消了可能发生的种群分化。     

广西北仑河口红树植物种群结构与动态特征

以广西北仑河口国家级自然保护区4种红树植物秋茄(Kandelia obovata)、桐花树(Aegiceras corniculatum)、白骨壤(Avicennia marina)和木榄(Bruguiera gymnorrhiza)为研究对象,在野外样地调查的基础上,采用高度级和大小级结构、静态生命表、存活曲线、时间序列分析和7种聚集强度指数等方法对4种红树植物的种群结构和动态进行了分析和预测,旨在阐明红树植物种群与群落的结构特征和动态变化规律以及潜在的驱动机制,为广西红树林生态系统的保护与恢复提供基础资料和科学依据。研究结果表明:木榄和秋茄种群更新良好,桐花树更新受到一定阻力,种群相对稳定,白骨壤种群更新不良,呈现明显的衰退趋势;4种红树植物种群不同龄级的存活量差别较大,存活量和生命期望一般随龄级的增加逐渐减少;白骨壤种群的存活曲线属于DeeveyⅠ型,其种群个体均能达到其平均生理寿命,木榄和秋茄种群属DeeveyⅡ型,各龄级个体具有相对一致的死亡率,而桐花树种群介于DeeveyⅠ型和DeeveyⅡ型之间,其幼龄期死亡率偏高,中龄期后死亡率逐渐接近;时间序列分析同样表明,白骨壤未来种群数量将明显降低,种群逐步衰退,桐花树未来种群数量将表现为稳中有降,而木榄和秋茄未来种群数量将趋于增加。4种红树植物不同龄级种群多呈现聚集分布,聚集强度往往随种群龄级的增加而趋于降低。上述结果表明,北仑河口4种红树植物的种群动态与群落所处演替阶段息息相关,先锋植物白骨壤种群处于较快衰退阶段,演替前中期的桐花树种群稳中有降,而演替中后期的秋茄和木榄种群出现不同程度的增长,反映出本次调查的红树林群落正处于演替的中期阶段,白骨壤和白骨壤+桐花树群丛将逐步演替为以木榄为优势种的群丛。此外,红树植物的种群动态受到自身繁殖特性、生境条件、种内和种间竞争、虫害等多种因素的调控。     

广西的红树林

本文主要讨论广西沿海的红树林的植物种类成分、外貌、适应形态学特点、群落类型和演替规律,以及生产管理问题。 该地区的红树植物种类计有8科、12属、12种,以红树科植物占优势。群落类型有:白骨壤群落、桐花树群落、秋茄-桐花树群落、红海榄群落、木榄群落、木榄-桐花树群落、桐花树-海漆稀树群落和红海榄+秋茄-桐花树群落等。     

中国红树植物种质资源现状与苗木繁育关键技术

红树植物种质与种苗生产是所有红树林生态恢复工程的基础.本文根据工程实践并结合已有研究资料,采用聚类分析等方法,对中国红树植物资源现状与苗木繁育关键技术进行初步分析.结果表明:中国红树群落可分为低温广布型、广布型、嗜热广布型和热带分布型4种类型;资源分布可划分为琼东沿海、北部湾沿海、珠江口至粤东沿海、闽南和台湾沿海、闽东至浙南沿海5个区域.其中,北部湾沿海红树林种质资源占全国的75.3％.目前中国红树植物苗木种类开发利用率为52.6％,以胎生红树植物为主.红树林苗木生产应注意繁育方法、种实采集与储存、育苗方式、水分和盐度选择、病虫害防治及越冬防寒措施6个技术环节.结合调查和生产实践,归纳分析了中国现有5种红树林苗圃类型(旱地设施苗圃、红树林滩涂苗圃、光滩苗圃、基围塘苗圃和米草滩涂苗圃)的结构和用途特点,为红树林生态恢复工程的系统集成管理提供参考.     

澳门红树林植物组成及种群分布格局的研究

调查工作于１９９２年４月～１９９４年９月在路环及凼仔红树林区内进行．路环红树林面积约７．１１５ｈｍ２,凼仔红树林面积约５７．２０５ｈｍ２．在两地区的海滩中,红树林植物计有４科４种,分属于红树科（Ｒｈｉｚｏｐｈｏｒａｃｅａｅ）、紫金牛科（Ｍｙｒｏｉｎａｃｅａｅ）、马鞭草科（Ｖｅｒｂｅｎａｃｅａｅ）和爵床科（Ａｃａｎｔｈａｃｅａｅ）．海岸半红树植物计有１５科２７种．利用样带法研究澳门红树林种群的分布格局,除秋茄为随机分布外,桐花树、白骨壤及老鼠勒均趋于集群的分布格局．结合数据分析８个研究区域种群生态位序列,只有凼仔红树林研究区最具有显著的生态位序列．     

粤东沿海红树林物种组成与群落特征

南海地区是全球红树林分布的中心区域之一。粤东沿海位于南海地区的北界,红树林物种组成和群落结构具有边缘性。利用卫星影像解译辅助技术,对筛选的23处红树林群落进行样地调查,记录了真红树植物12种,半红树植物6种,伴生植物7种。各群落平均高度为1.50—8.60 m,林相以灌丛、小乔木林为主。红树林群落Shannon-Wiener多样性指数为0.533—1.239,均匀度指数为0.662—0.957,天然林和人工林之间数值差异不显著。等级聚类分析将粤东沿海的红树林划分为演替早期人工林、演替早期天然林、演替中期天然林和演替后期天然林4个类别,各群落立地条件差异较大,沉积物总有机碳、盐度、总氮含量与群落分布状况的相关性较高。与1985年的报道相比,尽管该地区记录的红树林植物种类从20种增加至24种,但个别伴生植物消失以及半红树植物种群萎缩说明该地区红树林面临较大的环境压力。在物种多样性和均匀度均方面,粤东沿海红树林群落低于成熟红树林。过去数十年的围垦导致天然红树植物种群萎缩、生境破碎化是主要因素。基于该地区红树林群落的现状,未来人工林和残次天然林的优化改造是红树林恢复重建的重点,红树林恢复和保育的重点区域包括深圳湾的福田、范和港的蟹洲和韩江口的六合围。     

Population genetic structure, local adaptation, and conservation genetics of Kandelia obovata

Topographic changes during the Pleistocene glacial/interglacial cycles affected the distribution of coastline mangroves and influenced their population genetic structure. The submergence of the continental shelf off southeast China during the postglacial age caused coastline expansions and resulted in the colonization of mangroves. Here, we performed multilocus genome scans using amplified fragment-length polymorphisms to explore the effects of topography and natural selection in structuring Kandelia obovata populations. Long-term isolation by the Taiwan Strait since the end of the last glacial maximum, which obstructed gene flow, differentiated the Taiwanese and Chinese populations. Founders that colonized from both outlets of the Taiwan Strait were sourced from the northern South China Sea and the Ryukyus, thereby creating a melting pot in the Taiwan Strait. Inner-strait currents played roles as vectors for propagule dispersal among populations. Upon examination of the allele-frequency distributions of outlier loci, most negative outliers reflected the widespread polymorphisms shared by common ancestors. Furthermore, significant differentiation in the genetic components of positive outliers between this and other populations and the negative correlation with geographic distance suggested the presence of geography- or latitude-independent population divergence. Restored populations were compared with their sources and revealed biased sampling of nursery seedlings, which caused within-population substructures and reduced effective population sizes. This study indicated that multiple factors affect the population structure of the mangroves off southeast China.     

Colonization of the Philippines from Taiwan: a multi‐locus test of the biogeographic and phylogenetic relationships of isolated populations of shrews

Aim Colonization of the Philippines from Taiwan or neighbouring areas of the Asian mainland has been proposed as an important source of diversity for some plant and animal groups in the northern Philippines. Previous inferences, however, were based on taxonomic groupings, which sometimes fail to reflect phylogenetic history. Here, we test for colonization of the Philippines from the north in a group of shrews (Soricomorpha: Crocidura) using explicit inferences of evolutionary history. Location Southeast Asia. Methods We estimate the phylogenetic relationships of populations of shrews from Batan and Sabtang islands in the northern Philippines using DNA sequences from two mitochondrial genes and three nuclear loci. We employ topology tests to evaluate the possible relationships of these shrews to species from throughout Southeast Asia. Results We find conclusive evidence that shrews from Batan and Sabtang are closely related to Crocidura tanakae from Taiwan and additional specimens from the Asian mainland. Bayesian and frequentist topology tests using alignments of individual loci strongly reject any notion that shrews from Batan and Sabtang are part of the main Philippine radiation of Crocidura, indicating that the northernmost Philippine islands were almost certainly colonized by shrews from Taiwan or mainland Asia. Main conclusions Our results provide the first compelling evidence for colonization of the Philippine archipelago by a terrestrial vertebrate via a northern route. Invasion of the northern Philippines by shrews, however, did not lead to further range expansion to more southerly parts of the Philippines. This study, combined with previous results, documents that Crocidura colonized the Philippines at least three times. However, only one of these invasions led to in situ speciation and ubiquity across the archipelago. Our findings are part of a growing body of literature suggesting that oceanic archipelagos are often colonized multiple times by groups of closely related species, and occasionally from multiple sources.     

Glacial Effects on Sequence Divergence of Mitochondrial COII of Polyura eudamippus (Lepidoptera: Nymphalidae) in China

Sequence divergence of mitochondrial COII was analyzed in 50 specimens belonging to five subspecies of Polyura eudamippus (Lepidoptera: Nymphalidae) collected from southern China. There were nine haplotypes in the 405 bp of partial COII sequence. Distribution of the five subspecies was primarily consistent with the spatial distribution of haplotypes. The K _st statistic showed genetic differentiation among these subspecies, except between the pair of P. e. kuangtungensis and P. e. formosana, which were separated by the Taiwan Strait. This is consistent with the 10,000-year history of the Taiwan Strait, not long enough for detectable differentiation. The present distribution pattern of COII haplotypes of P. eudamippus should be shaped by the alteration of Pleistocene glaciations, and Yunnan might be the refugium of P. eudamippus in the ice age, judging from the abundant haplotypes remaining. There were two routes for P. eudamippus in the postglacial expansion, one northward to Sichuan, Chongqing, and Hubei and another eastward to the southeastern coast of mainland China and Taiwan Island. Because the haplotype of butterflies on Hainan Island (P. e. whiteheadi) was completely different from that of mainland China, it was estimated that butterflies on Hainan Island might be from the Indo-China Peninsula rather than from mainland China.     

Glacial effects on sequence divergence of mitochondrial COII of Polyura eudamippus (Lepidoptera: Nymphalidae) in China

Sequence divergence of mitochondrial COII was analyzed in 50 specimens belonging to five subspecies of Polyura eudamippus (Lepidoptera: Nymphalidae) collected from southern China. There were nine haplotypes in the 405 bp of partial COII sequence. Distribution of the five subspecies was primarily consistent with the spatial distribution of haplotypes. The K (st) statistic showed genetic differentiation among these subspecies, except between the pair of P. e. kuangtungensis and P. e. formosana, which were separated by the Taiwan Strait. This is consistent with the 10,000-year history of the Taiwan Strait, not long enough for detectable differentiation. The present distribution pattern of COII haplotypes of P. eudamippus should be shaped by the alteration of Pleistocene glaciations, and Yunnan might be the refugium of P. eudamippus in the ice age, judging from the abundant haplotypes remaining. There were two routes for P. eudamippus in the postglacial expansion, one northward to Sichuan, Chongqing, and Hubei and another eastward to the southeastern coast of mainland China and Taiwan Island. Because the haplotype of butterflies on Hainan Island (P. e. whiteheadi) was completely different from that of mainland China, it was estimated that butterflies on Hainan Island might be from the Indo-China Peninsula rather than from mainland China.     

Population differentiation and gene flow revealed by microsatellite DNA markers in the house mouse (Mus musculus castaneus) in Taiwan

We analyzed population subdivision and gene flow of the Southeast Asian house mouse (Mus musculus castaneus) in Taiwan by using six microsatellite DNA markers. Seven populations of the house mouse (187 individuals), including one from Fukien Province in southeastern China, which is separated from Taiwan by the Taiwan Strait, were analyzed in this study. The overall polymorphic level at the six loci was high (He = 0.76) although individual populations varied in their levels of heterozygosity (He = 0.35-0.83). For the populations within Taiwan, there was no evidence of isolation by distance and the level of gene flow was not (inversely) correlated to geographic distances. Gene flow was estimated to be higher across the Taiwan Strait than within the island of Taiwan. These observations of gene flow cannot be understood unless in the context of the historical human settlements and agricultural expansion, and the commensal habits of the species. We also discussed the causes of population subdivision and genetic variation among populations in terms of ecological characteristics of the house mouse in Taiwan.     

Northern gene flow into southeastern East Asians inferred from genome-wide array genotyping

The population history of Southeast (SE) China remains poorly understood due to the sparse sampling of present-day populations and limited modeling with ancient genomic data. We report genome-wide genotyping data from 207 present-day Han Chinese and Hmong-Mien (HM)-speaking She people from Fujian and Taiwan Island, SE China. We coanalyzed 66 Early Neolithic to Iron Age ancient Fujian and Taiwan Island individuals obtained from previously published works to explore the genetic continuity and admixture based on patterns of genetic variations of the high-resolution time transect. We found the genetic differentiation between northern and southern East Asians was defined by a north–south East Asian genetic cline and our studied southern East Asians were clustered in the southern end of this cline. The southeastern coastal modern East Asians are genetically similar to other southern indigenous groups as well as geographically close to Neolithic-to-Iron Age populations, but they also shared excess alleles with post-Neolithic Yellow River ancients, which suggested a southward gene flow on the modern southern coastal gene pool. In addition, we identified one new HM genetic cline in East Asia with the coastal Fujian HM-speaking She localizing at the intersection between HM and Han clines. She people show stronger genetic affinity with southern East Asian indigenous populations, with the main ancestry deriving from groups related to southeastern ancient indigenous rice farmers. The southeastern Han Chinese could be modeled with the primary ancestry deriving from the group related to the Yellow River Basin millet farmers and the remaining from groups related to rice farmers, which was consistent with the northern China origin of modern southeastern Han Chinese and in line with the historically and archaeologically attested southward migrations of Han people and their ancestors. Our estimated north–south admixture time ranges based on the decay of the linkage disequilibrium spanned from the Bronze Age to historic periods, suggesting the recent large-scale population migrations and subsequent admixture participated in the formation of modern Han in SE Asia.     

儒艮在中国近海的分布

儒艮Dugong dugon(Muller,1776)隶属海牛目Sirenia,儒艮科Dugongidae,俗称海牛,又称人鱼,海南岛渔民称海马。以往中国沿海产儒艮的研究甚少,只Hirasaka(1932)和寿振黄(1958)有过头骨及骨骼的描述报道,对其生态及分布方面的调查研究还没有深入的开展。1962年、1981年和1984年我们对儒艮在中国沿岸的分布进行了调查访问,并对近年所得儒艮的外形作了一些测量。现将所得资料整理报道。     

A migration analysis of the rice planthopper Nilaparvata lugens from the Philippines to East Asia with three-dimensional computer simulations

Migrations of the rice planthopper Nilaparvata lugens (Stål) (Delphacidae) from the Philippines to Taiwan, southern China, and southern Japan were analyzed using three-dimensional migration simulations. The results strongly suggested that the Southeast Asian population of N. lugens mixes with the East Asian population. This highlighted the possibility that planthoppers from the Southeast Asian population, which have properties different from those in the East Asian population such as feeding of resistant rice varieties and wing polymorphism, could migrate to Japan via southern China and Taiwan. This study, therefore, emphasizes the special care that should be taken to monitor the properties of immigrants to Japan.     

Genetic structure and inferences on potential source areas for Bactrocera dorsalis (Hendel) based on mitochondrial and microsatellite markers

Bactrocera dorsalis (Diptera: Tephritidae) is mainly distributed in tropical and subtropical Asia and in the Pacific region. Despite its economic importance, very few studies have addressed the question of the wide genetic structure and potential source area of this species. This pilot study attempts to infer the native region of this pest and its colonization pathways in Asia. Combining mitochondrial and microsatellite markers, we evaluated the level of genetic diversity, genetic structure, and the gene flow among fly populations collected across Southeast Asia and China. A complex and significant genetic structure corresponding to the geographic pattern was found with both types of molecular markers. However, the genetic structure found was rather weak in both cases, and no pattern of isolation by distance was identified. Multiple long-distance dispersal events and miscellaneous host selection by this species may explain the results. These complex patterns may have been influenced by human-mediated transportation of the pest from one area to another and the complex topography of the study region. For both mitochondrial and microsatellite data, no signs of bottleneck or founder events could be identified. Nonetheless, maximal genetic diversity was observed in Myanmar, Vietnam and Guangdong (China) and asymmetric migration patterns were found. These results provide indirect evidence that the tropical regions of Southeast Asia and southern coast of China may be considered as the native range of the species and the population expansion is northward. Yunnan (China) is a contact zone that has been colonized from different sources. Regions along the southern coast of Vietnam and China probably served to colonize mainly the southern region of China. Southern coastal regions of China may also have colonized central parts of China and of central Yunnan.     

A time‐calibrated phylogenetic approach to assessing the phylogeography,colonization history and phenotypic evolution of snakes in the Japanese Izu Islands

Aim We infer the biogeography and colonization history of a dispersal‐limited terrestrial vertebrate, the Japanese four‐lined ratsnake (Elaphe quadrivirgata), to reveal the number of times mainland populations have invaded the Izu Archipelago of Japan, the mainland sources of these colonists, and the time‐scale of colonization. We compare these results with those of past studies in an attempt to uncover general biogeographical patterns. Moreover, we briefly examine the significance of colonization history when evaluating the evolution of body size and melanism of the Izu Island E. quadrivirgata populations. Location The Izu Islands (Oshima, Toshima, Niijima, Shikine, Kozu, Tadanae and Mikura), a volcanic archipelago off the Pacific coast of central Japan. Methods We obtained DNA sequences of the mitochondrial cytochrome b gene (1117 base pairs) from 373 individual snakes sampled from seven of the Izu Islands and 25 mainland localities. We employed partitioned Bayesian phylogenetic analyses assuming a relaxed molecular clock to estimate phylogenetic relationships among extant haplotypes and to give an explicit temporal scale to the timing of clade divergence, colonization history and tempo of body‐size evolution. Moreover, we employed model‐based biogeographical analysis to calculate the minimum number of times E. quadrivirgata colonized the Izu Islands. Results We found evidence that three separate regions of the Izu Archipelago have been colonized independently from mainland ancestors within the past 0.58–0.20 Ma. The Izu Peninsula plus Oshima and Mikura were both colonized independently from lineages inhabiting eastern mainland Japan. The Toshima, Niijima, Shikine, Kozu and Tadanae populations all derive from a single colonization from western mainland Japan. Oshima has been subject to three or possibly four colonizations. Main conclusions These results support the hypothesis that the extreme body‐size disparity among island populations of this ratsnake evolved in situ. Moreover, the fact that the dwarf, melanistic population inhabiting Oshima descends from multiple mainland colonization events is evidence of an extremely strong natural selection pressure resulting in the rapid evolution of this unique morphology. These results contrast with theoretical predictions that natural selection pressures should play a decreased role on islands close to the mainland and/or subject to frequent or recent immigration.