Comprehensive molecular sampling yields a robust phylogeny for geometrid moths (Lepidoptera: Geometridae)

Background

The moth family Geometridae (inchworms or loopers), with approximately 23 000 described species, is the second most diverse family of the Lepidoptera. Apart from a few recent attempts based on morphology and molecular studies, the phylogeny of these moths has remained largely uninvestigated.

Methodology/Principal Findings

We performed a rigorous and extensive molecular analysis of eight genes to examine the geometrid affinities in a global context, including a search for its potential sister-taxa. Our maximum likelihood analyses included 164 taxa distributed worldwide, of which 150 belong to the Geometridae. The selected taxa represent all previously recognized subfamilies and nearly 90% of recognized tribes, and originate from all over world. We found the Geometridae to be monophyletic with the Sematuridae+Epicopeiidae clade potentially being its sister-taxon. We found all previously recognized subfamilies to be monophyletic, with a few taxa misplaced, except the Oenochrominae+Desmobathrinae complex that is a polyphyletic assemblage of taxa and the Orthostixinae, which was positioned within the Ennominae. The Sterrhinae and Larentiinae were found to be sister to the remaining taxa, followed by Archiearinae, the polyphyletic assemblage of Oenochrominae+Desmobathrinae moths, Geometrinae and Ennominae.

Conclusions/Significance

Our study provides the first comprehensive phylogeny of the Geometridae in a global context. Our results generally agree with the other, more restricted studies, suggesting that the general phylogenetic patterns of the Geometridae are now well-established. Generally the subfamilies, many tribes, and assemblages of tribes were well supported but their interrelationships were often weakly supported by our data. The Eumeleini were particularly difficult to place in the current system, and several tribes were found to be para- or polyphyletic.     

Neotropical ennomine moths: a review of the genera (Lepidoptera: Geometridae)

The classification of the Neotropical genera of the Ennominae is reviewed and 267 genera are recognised to occur in this region. Three new genera are described and three others are reinstated, while 48 generic synonyms are newly established. Other changes established in this work include 14 species synonyms and 237 new or reinstated combinations. External features and genitalia of representative members of the genera are illustrated (753 figures). All the known Neotropical species and subspecies of Ennominae are listed ( c . 3470), plus their synonyms. The tribes to which the genera belong are assessed, with c . 200 of the genera assigned to tribe or other suprageneric grouping.  © 2002 The Linnean Society of London, Zoological Journal of the Linnean Society , 2002, 135 , 121–401.     

The genus Cleora Curtis (Lepidoptera: Geometridae) in Fiji

An account is given of the 10 species of the genus Cleora known to inhabit Fiji; two of these are described as new and two are transferred to Cleora from other genera. Species previously known from Fiji are re-described, and a key to the males is included.     

Molecular phylogeny of the subfamilies in Geometridae (Geometroidea: Lepidoptera).

Molecular sequence data from three gene fragments were used to examine critically a provisional phylogenetic classification based on morphological characters of the Geometridae, one of the most species-rich families of moths. The sister group relationship between Geometridae and Drepanidae gained further support from the molecular analysis, which was based on the ND1 mitochondrial gene and the first and second expansion segments of the 28S ribosomal RNA gene. Although the alignment of the second expansion segment contained regions with many gaps, it provided the most resolution of the gene fragments. Parsimony analysis of the combined data resulted in a cladogram in which species belonging to Drepanidae, Larentiinae, and Sterrhinae formed monophyletic groups. The Ennominae did not form a monophyletic group but rather were contained within a broader monophyletic group including Archiearinae, Geometrinae, and Alsophilinae (represented by only one species per group in the present study). The molecular results were used to explore further the relationship between Sterrhinae and Larentiinae, the question as to whether Ennominae actually represent a monophyletic group, and the relationships between Ennominae and some of the other subfamilies.     

Geometrid moths (Lepidoptera. Geometridae) of the Curonian Spit in the Baltic sea

A total of 11049 specimens of 170 geometrid moth species were collected in the period from 1982 to 2004 on the Curonian Spit (Kaliningrad Prov.). With the literature data taken into account, the list of geometrid moths known from the Curonian Spit includes 195 species.     

Effect of light quality and larval diet on morph induction in the polymorphic caterpillar Nemoria arizonaria (Lepidoptera: Geometridae)

The emerald moth Nemoria arizonaria (Geometridae) is bivoltine, with distinct broods of caterpillars hatching in the spring and summer. Caterpillars of the spring brood develop into mimics of oak catkins, while caterpillars of the summer brood develop into mimics of oak twigs. Previous rearing experiments showed that all caterpillars reared on oak catkins developed into catkin morphs, while all caterpillars reared on oak leaves developed into twig morphs, regardless of temperature or photoperiod. However, those previous rearing experiments did not control the colour of light perceived by the caterpillars independently of their dict. Since wavelengths of light perceived by some species of polymorphic caterpillars can influence their colour, it is possible that morph induction in Nemoria arizonaria is due to the characteristics of light reflected from yellow catkins or green leaves, rather than larval diet itself. The experiments reported here independently varied larval diet and light characteristics to determine if light quality is involved in morph induction. Only larval diet influenced morph induction, since all caterpillars reared on catkins developed into the catkin morph, and all caterpillars reared on oak leaves developed into the twig morph, regardless of whether they perceived yellow light, green light, or were raised in the dark.     

Neotropical Emerald moths: a review of the genera (Lepidoptera: Geometridae, Geometrinae)

The classification of the Neotropical genera of the Geometrinae is reviewed and 38 genera are recognized (including one nomen dubium). Seven generic synonyms are newly established and the genus Gnathosocia is described as new. Other changes established in this work include 1 species synonym and 36 new or reinstated combinations. A key to genera, based on external features, is provided for their identification. External features and genitalia of representatives of each genus are illustrated. All the 506 known Neotropical species and subspecies of Geometrinae are catalogued and details of type material, examined extensively, are given.     

Geometrid moths of the genus Eupithecia Curtis, 1825 (Lepidoptera,Geometridae): Prerequisites and characteristic features of high species diversity

The prerequisites and characteristics of high species diversity of the genus Eupithecia (Geometridae), the largest in the order Lepidoptera, are discussed. The surge of speciation in this genus was facilitated by the evolutionarily advanced morpho-functional characters of the adults and larvae, as well as by the plasticity of a number of morphological structures, especially those of the genitalia in both sexes, in the ancestral Eupithecia. The wide range of flowering plants has served as a basis for close associations of the larvae predominantly with generative plant organs and for broad adaptive radiation of Eupithecia into a variety of ecological niches in the areas lacking their competitors from other genera of the tribe Eupitheciini. Transition of the larvae of some Eupithecia to facultative or obligate ambush predation was facilitated by adaptation of the antho- and carpophagous species to high-calorie food rich in proteins, lipids, and carbohydrates. Based on the distribution of the genus Eupithecia and its most morphologically primitive species-groups, its East Asian origin is hypothesized. It is noted that many of the largest genera of animals and plants include relatively small-sized species.     

A comprehensive DNA barcode library for the looper moths (Lepidoptera: Geometridae) of British Columbia, Canada

Background

The construction of comprehensive reference libraries is essential to foster the development of DNA barcoding as a tool for monitoring biodiversity and detecting invasive species. The looper moths of British Columbia (BC), Canada present a challenging case for species discrimination via DNA barcoding due to their considerable diversity and limited taxonomic maturity.

Methodology/Principal Findings

By analyzing specimens held in national and regional natural history collections, we assemble barcode records from representatives of 400 species from BC and surrounding provinces, territories and states. Sequence variation in the barcode region unambiguously discriminates over 93% of these 400 geometrid species. However, a final estimate of resolution success awaits detailed taxonomic analysis of 48 species where patterns of barcode variation suggest cases of cryptic species, unrecognized synonymy as well as young species.

Conclusions/Significance

A catalog of these taxa meriting further taxonomic investigation is presented as well as the supplemental information needed to facilitate these investigations.     

Molecular phylogeny and biogeography of the fern genus Pteris (Pteridaceae)

Background and Aims

Pteris (Pteridaceae), comprising over 250 species, had been thought to be a monophyletic genus until the three monotypic genera Neurocallis, Ochropteris and Platyzoma were included. However, the relationships between the type species of the genus Pteris, P. longifolia, and other species are still unknown. Furthermore, several infrageneric morphological classifications have been proposed, but are debated. To date, no worldwide phylogenetic hypothesis has been proposed for the genus, and no comprehensive biogeographical history of Pteris, crucial to understanding its cosmopolitan distribution, has been presented.

Methods

A molecular phylogeny of Pteris is presented for 135 species, based on cpDNA rbcL and matK and using maximum parsimony, maximum likelihood and Bayesian inference approaches. The inferred phylogeny was used to assess the biogeographical history of Pteris and to reconstruct the evolution of one ecological and four morphological characters commonly used for infrageneric classifications.

Key Results

The monophyly of Pteris remains uncertain, especially regarding the relationship of Pteris with Actiniopteris + Onychium and Platyzoma. Pteris comprises 11 clades supported by combinations of ecological and morphological character states, but none of the characters used in previous classifications were found to be exclusive synapomorphies. The results indicate that Pteris diversified around 47 million years ago, and when species colonized new geographical areas they generated new lineages, which are associated with morphological character transitions.

Conclusions

This first phylogeny of Pteris on a global scale and including more than half of the diversity of the genus should contribute to a new, more reliable infrageneric classification of Pteris, based not only on a few morphological characters but also on ecological traits and geographical distribution. The inferred biogeographical history highlights long-distance dispersal as a major process shaping the worldwide distribution of the species. Colonization of different niches was followed by subsequent morphological diversification. Dispersal events followed by allopatric and parapatric speciation contribute to the species diversity of Pteris.     

Mitochondrial phylogeny and biogeography of the genus Gobio (Teleostei: Cyprinidae) in Turkey

Species of the cyprinid genus Gobio Cuvier, 1816 are widely distributed in freshwater lakes and rivers in Turkey, which is a hotspot for freshwater fish diversity and endemism. The mitochondrial 16S, coxI and cytb genes were sequenced for 217 individuals representing 15 species of Gobio from Turkey. A total of 23 haplotypes were identified for each mitochondrial gene. The genetic distance matrices show that Turkish Gobio species are clustered into three groups (northwestern, central and northeastern Anatolia). Phylogenetic trees constructed with combined dataset by using maximum parsimony, maximum likelihood and Bayesian inference methods revealed that the Turkish Gobio species belongs to three well-supported groups in accordance with their geographic distribution: Group I comprises species found in Central Anatolia, Group II species ranging from eastern Thrace to western Anatolia (northwestern Group) and Group III contains only one species from Western Transcaucasia (northeastern Group). The estimated divergence times between the three Gobio groups, calculated using a conventional 1% rate of mutation for a fish mitochondrial cytb gene per million years, coincide with the late Miocene period in which the tectonic uplift of Anatolia and global climate fluctuations occurred. The relatively low genetic distance between Gobio species in the Turkish Lake District indicate that they are not good species.     

Taxonomic study of the genus Trichopteryx Hübner (Lepidoptera: Geometridae) in Korea

The larentiine genus Trichopteryx Hübner in Korea is reviewed. Nine species, including one newly recorded species, T. misera (Butler), are recognized. Diagnostic characters of each species with photographs of adults and genitalia are provided. A key to the Korean species is also given.     

The inheritance of melanism in the moths Erannis defoliaria (Clerck) and Agriopis marginaria (Fab.) (Lepidoptera: Geometridae)

The melanic forms of the two geometrid moths Erannis defoliaria and Agriopis marginaria are controlled by autosomal loci with melanic dominant over non-melanic forms. In E. defoliaria segregation ratios conform to expectation but in some families of A. marginaria excesses of melanic females may be due to misclassification in that sex or to differences in viability between melanic and non-melanic genotypes.     

Molecular phylogeny, historical biogeography, and divergence time estimates for swallowtail butterflies of the genus Papilio (Lepidoptera: Papilionidae)

Swallowtail butterflies are recognized as model organisms in ecology, evolutionary biology, genetics, and conservation biology but present numerous unresolved phylogenetic problems. We inferred phylogenetic relationships for 51 of about 205 species of the genus Papilio (sensu lato) from 3.3-Kilobase (kb) sequences of mitochondrial and nuclear DNA (2.3 kb of cytochrome oxidases I and II and 1.0 kb of elongation factor 1 alpha). Congruent phylogenetic trees were recovered within Papilio from analyses of combined data using maximum likelihood, Bayesian analysis, and maximum parsimony bootstrap consensus. Several disagreements with the traditional classification of Papilio were found. Five major previously hypothesized subdivisions within Papilio were well supported: Heraclides, Pterourus, Chilasa, Papilio (sensu stricto), and Eleppone. Further studies are required to clarify relationships within traditional "Princeps," which was paraphyletic. Several biologically interesting characteristics of Papilio appear to have polyphyletic origins, including mimetic adults, larval host associations, and larval morphology. Early diversification within Papilio is estimated at 55-65 million years ago based on a combination of biogeographic time constraints rather than fossils. This divergence time suggests that Papilio has slower apparent substitution rates than do Drosophila and fig-pollinating wasps and/or divergences corrected using best-fit substitution models are still being consistently underestimated. The amount of sequence divergence between Papilio subdivisions is equivalent to divergences between genera in other tribes of the Papilionidae, and between genera of moths of the noctuid subfamily Heliothinae.     

New species and other rare geometrid moths (Lepidoptera,Geometridae) in the Asian part of Russia

The new species Pseudentephria irinae Vasilenko, sp. n. is described. The records for three geometrid species, Xanthorhoe borealis Hulst, 1896, X. malaisei Djakonov, 1929, and Idaea rufaria (Hübner, [1799]), are given. The systematic position of X. malaisei is corrected. X. borealis in Russia and I. rufaria in Siberia were found for the first time. The distinctions in the coloration and pattern of the wings, as well as in the genital structures, between closely related species X. ferrugata, X. malaisei, and X. borealis are shown.     

Musculature of the male terminalia in geometrid moths of the subfamily Larentiinae (Lepidoptera,Geometridae)

The morphology of the male terminalia of 16 species belonging to 12 tribes of Larentiinae was studied; for 12 species and 4 tribes it was done for the first time. No clear diagnosis of Larentiinae based on the features of the male genital musculature can be given since the apomorphic position of M1, M4, and M7 muscles may originate independently in different tribes. The primitive Larentiinae retain the pattern of genital musculature plesiomorphic for Geometridae. Muscles M11 (Melanthiini: Anticollix sparsata) and M22 (Asthenini: Euchoeca nebulata and Hydrelia flammeolaria) are described for the first time for the family Geometridae.     

A molecular phylogeny of the hawkmoth genus Hyles (Lepidoptera: Sphingidae, Macroglossinae)

The hawkmoth genus Hyles is one of 15 genera in the subtribe Choerocampina of the subfamily Macroglossinae. Due to a remarkable uniformity, morphological characters usually used to identify and classify Lepidoptera at the species level cannot be used in this genus. Instead, we used DNA sequences comprising about 2300 bp derived from the mitochondrial genes COX I, COX II, and tRNA-leucine to elucidate the phylogeny of Hyles. The results corroborate the monophyly of Hyles but conflict with previous internal classifications of the genus based on morphology. Hyles seems to have evolved in the Neotropics during the Oligocene/Eocene epochs and the molecular data (which evolved clock-like) confirm the hypothesis that it is a very young genus that radiated on a global scale rather quickly. We hypothesize its sister group to be one of the genera Deilephila, Theretra or Xylophanes. The Nearctic may have been colonized rapidly by Hyles once the land bridge formed during the Pliocene, since within this same Epoch, the invasion of the Palaearctic appears to have proceeded from the East, via the Bering route. The colonization of Australia appears to have occurred rather early in Hyles radiation, although the route is not clear. We propose that the radiation of the Hyles euphorbiae-complex s. str. (HEC) occurred as recently as the Pliocene/Pleistocene boundary and that its roots can still be reconstructed in Asia. Hyles dahlii is closely related to the HEC, but a sister group relationship to the HEC s. str. cannot be corroborated unequivocally. HEC population ranges appear to have tracked climate oscillations during the Pleistocene Ice Ages, resulting in hybridization around the Mediterranean Sea as they repeatedly intermingled. Comparison of the phylogeny with food plant affiliations leads us to hypothesize that Euphorbia monophagy evolved at least two times independently within Hyles.